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Deputy Director of Department
Deputy Director of National Reference Center
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Program_project: Quantitative biology

All Publications

Paul Palmquist-Gomes, Gaelle Letort, Ayushi U. Hegde, Jose Maria Perez-Pomares and Sigolene M Meilhac, VANGL2 shapes the mouse heart tube from adjacent epithelia and without planar polarity, bioRxiv 2025.09.05.674213.

de Tredern E, Manceau D, Blanc A, Parameswaran A, Sakagiannis P, Barre C, Sus V, Viscido F, Akiki P, Hasan MA, Autran S, Laurent F, Nawrot MP, Masson JB, Jovanic T, Feeding state-dependent neuropeptidergic modulation of reciprocally interconnected inhibitory neurons biases sensorimotor decisions in Drosophila., Nat Commun 2025 Sep; 16(1): 8198.

Eloïse de Tredern, Dylan Manceau, Alexandre Blanc, Abhijit Parameswaran, Panagiotis Sakagiannis, Chloe Barre, Victoria Sus, Francesca Viscido, Perla Akiki, Md Amit Hasan, Sandra Autran, François Laurent, Martin Paul Nawrot, Jean-Baptiste Masson, Tihana Jovanic, Feeding state-dependent neuropeptidergic modulation of reciprocally interconnected inhibitory neurons biases sensorimotor decisions in Drosophila, Nature Communications, 2025, 16 (1), pp.8198. ⟨10.1038/s41467-025-61805-y⟩.

Morizet D, Foucher I, Mignerey I, Alunni A, Bally-Cuif L, Notch signaling blockade links transcriptome heterogeneity in quiescent neural stem cells with reactivation routes and potential., Sci Adv 2025 Aug; 11(35): eadu3189.

Bennabi I, Hansen P, Merle M, Pineau J, Lopez-Delisle L, Kolly D, Duboule D, Mayran A, Gregor T, Size-dependent temporal decoupling of morphogenesis and transcriptional programs in pseudoembryos., Sci Adv 2025 Aug; 11(34): eadv7790.

Guibert N, Mocho JP, Bally-Cuif L, Bedu S, Balance Between Daily Water Renewal and Nitrate Levels in a Recirculating Zebrafish Housing System., Zebrafish 2025 Aug; (): .

Chapard C, Bastié N, Cournac A, Chaptal L, Mboumba H, Queille S, Thierry A, Gadal O, Lengronne A, Koszul R, Beckouët F, RNA Pol II-based regulations of chromosome folding., Cell Genom 2025 Aug; (): 100970.

Levayer R, Special issue: “Novel functions of programmed cell death in development: Current status and future challenges”., Semin Cell Dev Biol 2025 Jul; 174(): 103637.

Thetiot M, Cossart P, Bally-Cuif L, Mini-organs and early embryos in vitro: what is at stake?, C R Biol 2025 Jul; 348(): 159-166.

Chen PT, Levo M, Zoller B, Gregor T, A conserved coupling of transcriptional ON and OFF periods underlies bursting dynamics., Nat Struct Mol Biol 2025 Jul; (): .

Morizet D, Bally-Cuif L, Reduced Adult Neurogenesis in Humans Results From a Tradeoff Rather Than Direct Negative Selection., Bioessays 2025 Jul; (): e70041.

Flavio Alvarez, Guilherme Dias de Melo, Florence Larrous, Lauriane Kergoat, Batiste Boëda, Vincent Michel, Danielle Seilhean, Magali Tichit, David Hing, David Hardy, Etienne Kornobis, Hervé Bourhy, Nicolas Wolff, Célia Caillet-Saguy, The SARS-CoV-2 envelope PDZ binding motif acts as a virulence factor disrupting host’s epithelial cell–cell junctions [brief report], Cellular and Molecular Biology Letters, 2025, 30 (1), pp.80. ⟨10.1186/s11658-025-00758-y⟩.

Manish K Singh, Laetitia Cavellini, Maria Angeles Morcillo-Parra, Christina Kunz, Mickaël Lelek, Perrine Bomme, Aurélia Barascu, Cynthia Alsayyah, Maria Teresa Teixeira, Naïma Belgareh-Touzé, Adeline Mallet, Lea Dietrich, Christophe Zimmer, Mickael M Cohen, A constricted mitochondrial morphology formed during respiration, Nature Communications, 2025, 16 (1), pp.5314. ⟨10.1038/s41467-025-60658-9⟩.

Gaston Bizel-Bizellot, Simon Galmiche, Benoît Lelandais, Tiffany Charmet, Laurent Coudeville, Arnaud Fontanet, Christophe Zimmer, Extracting circumstances of Covid-19 transmission from free text with large language models, Nature Communications, 2025, 16 (1), pp.5836. ⟨10.1038/s41467-025-60762-w⟩.

Parul Singh, Justine Couble, Jacques Serizay, Maureen D Cabahug, Catarina Rosa, Patty Chen, Artur Scherf, Romain Koszul, Sebastian Baumgarten, Jessica M Bryant, High-resolution map of the Plasmodium falciparum genome reveals MORC/ ApiAP2-mediated links between distant, functionally related genes, Nature Microbiology, 2025, 10 (7), pp.1665-1683. ⟨10.1038/s41564-025-02038-z⟩.

Najate Benamer, Hélène Le Ribeuz, Chloé Felgerolle, Charlotte Calvet, Olivier Postal, Baptiste Plion, Mauricio Saenz-Roldan, Marie Giorgi, Marie-José Lecomte, Yann Nguyen, Christine Petit, Nicolas Michalski, Boris Gourévitch, Omar Akil, Saaid Safieddine, Cochlear gene therapy restores hearing and auditory processing in an atypical DFNB9 mouse model, Communications Medicine, 2025, 5 (1), pp.229. ⟨10.1038/s43856-025-00926-3⟩.

Carlos Garcia-Lopez-de-Haro, Caterina Fuster-Barcelo, Curtis T. Rueden, Jonathan Heras, Vladimir Ulman, Daniel Franco-Barranco, Adrian Ines, Kevin W. Eliceiri, Jean-Christophe Olivo-Marin, Jean-Yves Tinevez, Daniel Sage, Arrate Munoz-Barrutia, SAMJ: Fast Image Annotation on ImageJ/Fiji via Segment Anything Model, arXiv:2506.02783.

Pereda J, Espinosa R, García-Solís B, Guerra-Galán T, Van-Den-Rym A, Kars ME, Mena R, Galán V, de Andrés-Martín A, Rodríguez-Gallego C, López-Lera A, Corvillo F, Pérez-Martínez A, López-Collazo E, Sánchez-Ramón S, Martínez-Barricarte R, Quintana-Murci L, Lorenzo-Salazar JM, Itan Y, Flores C, Pérez-de-Diego R, IEIVariantFilter: a bioinformatics tool to speed up genetic diagnosis of inborn errors of immunity patients., NAR Genom Bioinform 2025 Jun; 7(2): lqaf069.

Lopopolo M, Avanzi C, Duchene S, Luisi P, de Flamingh A, Ponce-Soto GY, Tressieres G, Neumeyer S, Lemoine F, Nelson EA, Iraeta-Orbegozo M, Cybulski JS, Mitchell J, Marks VT, Adams LB, Lindo J, DeGiorgio M, Ortiz N, Wiens C, Hiebert J, Bonifaz A, Montes de Oca G, Paredes-Solis V, Franco-Paredes C, Vera-Cabrera L, Pereira Brunelli JG, Jackson M, Spencer JS, Salgado CG, Han XY, Pearce CM, Warren AK, Rosa PS, de Finardi AJ, Belone AFF, Ferreira C, Suffys PN, Fontes ANB, Vasconcellos SEG, Schaub R, Couppié P, Drak Alsibai K, Hernández-Castro R, Silva Miranda M, Estrada-Garcia I, Jurado-Santacruz F, Orlando L, Schroeder H, Quintana-Murci L, Del Papa M, Lahiri R, Malhi RS, Rasmussen S, Rascovan N, Pre-European contact leprosy in the Americas and its current persistence., Science 2025 May; (): eadu7144.

Bluhm A, Xiang W, Wien F, Thureau A, Chevreuil M, Raynal B, Geissler S, Wermann M, Schilling S, Bénas P, Hartlage-Rübsamen M, Schulze A, Sauter C, Roßner S, Monomers, Dimers, and Oligomers of Pyroglutamate-Modified α-Synuclein Fragments Exhibit Distinct Biophysical Characteristics., ACS Chem Neurosci 2025 May; 16(10): 1919-1936.

, Sedentary chromosomal integrons as biobanks of bacterial antiphage defense systems, Science, 388, 6747, (2025)..

Darracq B, Littner E, Brunie M, Bos J, Kaminski PA, Depardieu F, Slesak W, Debatisse K, Touchon M, Bernheim A, Bikard D, Le Roux F, Mazel D, Rocha EPC, Loot C, Sedentary chromosomal integrons as biobanks of bacterial antiphage defense systems., Science, 2025 May; 388(6747): eads0768.

Mareuil F, Torchet R, Ruano LC, Mallet V, Nilges M, Bouvier G, Sperandio O, InDeepNet: a web platform for predicting functional binding sites in proteins using InDeep., Nucleic Acids Res 2025 May; (): .

Swistak L, Albert M, Valenzuela C, Gokerkucuk EB, Bontems F, Tachon S, Egger KT, Gazi AD, Sartori-Rupp A, Lesser CF, Paul-Gilloteaux P, Tinevez JY, Vos M, Enninga J, The bacterial type three secretion system induces mechanoporation of vacuolar membranes., PLoS Biol 2025 May; 23(5): e3003135.

Mathilde Briday, Nicolas Carvalho, Natalia Oganesyan, Min-Ju Chang, Andrew Lees, Sébastien Brier, Alexandre Chenal, Comparative analysis of the structural dynamics of diphtheria toxin and CRM197 carrier proteins used in the development of conjugate vaccines, International Journal of Pharmaceutics, 2025, 675, pp.125535. ⟨10.1016/j.ijpharm.2025.125535⟩.

Mazzuoli MV, van Raaphorst R, Martin LS, Bock FP, Thierry A, Marbouty M, Waclawiková B, Stinenbosch J, Koszul R, Veening JW, HU promotes higher order chromosome organization and influences DNA replication rates in Streptococcus pneumoniae., Nucleic Acids Res 2025 Apr; 53(8): .

Grata A, Levayer R, Epithelial cell extrusion at a glance., J Cell Sci 2025 Apr; 138(8): .

Raphael Reme; Alasdair Newson; Elsa Angelini; Jean-Christophe Olivo-Marin; Thibault Lagache, SINETRA: A Versatile Framework for Evaluating Single Neuron Tracking in Behaving Animals, ISBI, Houston, TX, USA, 2025, pp. 1-5.

Bourmancé L, Marie A, Puppo R, Brûlé S, Schaeffer P, Toupet M, Nitsche R, Elsaesser A, Kish A, The salty tango of brine composition and UV photochemistry effects on Halobacterium salinarum cell envelope biosignature preservation., Commun Biol 2025 Apr; 8(1): 602.

Thetiot M, Sart S, Cussigh D, Coolen M, Baroud CN, Bally-Cuif L, Generation and Pharmacological Manipulation of 3D-Spheroid Cultures Derived From Zebrafish Adult Neural Stem Cells in a Droplet-Based Microfluidic Platform., Biol Cell 2025 Apr; 117(4): e70007.

Mohamed M. Benimam, Vannary Meas-Yedid, Suvadip Mukherjee, Astri Frafjord, Alexandre Corthay, Thibault Lagache & Jean-Christophe Olivo-Marin , Statistical analysis of spatial patterns in tumor microenvironment images, Nature Communications volume 16, Article number: 3090 (2025) .

Benimam MM, Meas-Yedid V, Mukherjee S, Frafjord A, Corthay A, Lagache T, Olivo-Marin JC, Statistical analysis of spatial patterns in tumor microenvironment images., Nat Commun 2025 Mar; 16(1): 3090.

Paul Haase, Angga Perima, Venkat Raman Ramnarayan, Patrick England, Bruno Iannascoli, Andre Limnander, Seblewongel Asrat, Andrea Vecchione, Jamie M Orengo, Matthew A Sleeman, Pierre Bruhns, Anatomical Distribution and Quantification of IgE Secretion in Mouse Models of House Dust Mite Allergy, Allergy, In press, ⟨10.1111/all.16546⟩.

Léa Deltourbe, Jamie Sugrue, Elizabeth Maloney, Florian Dubois, Anthony Jaquaniello, Jacob Bergstedt, Etienne Patin, Lluis Quintana-Murci, Molly Ingersoll, Darragh Duffy, Steroid hormone levels vary with sex, aging, lifestyle, and genetics, Science Advances , 2025, 11 (13), pp.eadu6094. ⟨10.1126/sciadv.adu6094⟩.

Iacopo Ruolo, Sara Napolitano, Lorena Postiglione, Gennaro Napolitano, Andrea Ballabio, Diego Di Bernardo, Investigation of dynamic regulation of TFEB nuclear shuttling by microfluidics and quantitative modelling, Communications Biology, 2025, 8 (1), pp.443. ⟨10.1038/s42003-025-07870-x⟩.

Cardona AH, Peixoto MM, Borjigin T, Gregor T, Bridging spatial and temporal scales of developmental gene regulation., Curr Opin Genet Dev 2025 Mar; 92(): 102328.

Palese F, Rakotobe M, Zurzolo C, Transforming the concept of connectivity: unveiling tunneling nanotube biology, and their roles in brain development and neurodegeneration., Physiol Rev 2025 Mar; (): .

Michaut A, Chamolly A, Villedieu A, Corson F, Gros J, A tension-induced morphological transition shapes the avian extra-embryonic territory., Curr Biol 2025 Mar; (): .

Fermon L, Germain-Amiot N, Oriol C, Rouillon A, Augagneur Y, Dréano S, Nicolas I, Chenal A, Bondon A, Chevance S, Pinel-Marie ML, Membrane selectivity and pore formation of SprA1 and SprA2 hemolytic peptides from Staphylococcus aureus type I toxin-antitoxin systems., FEBS J 2025 Mar; (): .

Bønnelykke TH, Chabry MA, Perthame E, Dombrowsky G, Berger F, Dittrich S, Hitz MP, Desgrange A, Meilhac SM, Notch3 is an asymmetric gene and a modifier of heart looping defects in Nodal mouse mutants., PLoS Biol 2025 Mar; 23(3): e3002598.

Vendrell-Fernández S, Beamud B, Abou Haydar Y, Am de Sousa J, Burlaud-Gaillard J, Kornobis E, Raynal B, Vinh J, Bikard D, Ghigo JM, Incomplete lytic cycle of a widespread Bacteroides bacteriophage leads to the formation of defective viral particles., PLoS Biol 2025 Mar; 23(3): e3002787.

Ruiz-Gutierrez N, Dupas J, Auquier E, Barbarin-Bocahu I, Gaudon-Plesse C, Saveanu C, Graille M, Le Hir H, RNA anchoring of Upf1 facilitates recruitment of Dcp2 in the NMD decapping complex., Nucleic Acids Res 2025 Feb; 53(5): .

Girard F, Even A, Thierry A, Ruault M, Meneu L, Larrous P, Garnier M, Adiba S, Taddei A, Koszul R, Cournac A, Parasitic plasmids are anchored to inactive regions of eukaryotic chromosomes through a nucleosome signal., EMBO J 2025 Feb; (): .

Etienne-Manneville S, Comments on ‘Vimentin intermediate filaments coordinate actin stress fibers and podosomes to determine the extracellular matrix degradation by macrophages’., J Mol Cell Biol 2025 Feb; (): .

Gagliardini M, Mechaussier S, Campos Pina C, Morais M, Postal O, Jean P, Dupont T, Singh-Estivalet A, Udugampolage S, Scandola C, Verpy E, Libé-Philippot B, Inbar TC, Schwenkgrub J, Spinola CMB, Etournay R, El-Amraoui A, Bathellier B, Mallet A, Delmaghani S, Giraudet F, Petit C, Gourévitch B, Avan P, Michalski N, Deciphering Auditory Hyperexcitability in Otogl Mutant Mice Unravels an Auditory Neuropathy Mechanism., Adv Sci (Weinh) 2025 Feb; (): e2410776.

Perochon T, Krsnik Z, Massimo M, Ruchiy Y, Romero AL, Mohammadi E, Li X, Long KR, Parkkinen L, Blomgren K, Lagache T, Menassa DA, Holcman D, Unraveling microglial spatial organization in the developing human brain with DeepCellMap, a deep learning approach coupled with spatial statistics, Nat Commun. 2025 Feb 13;16(1):1577..

Léa Meneu, Christophe Chapard, Jacques Serizay, Alex Westbrook, Etienne Routhier, Myriam Ruault, Manon Perrot, Alexandros Minakakis, Fabien Girard, Amaury Bignaud, Antoine Even, Géraldine Gourgues, Domenico Libri, Carole Lartigue, Aurèle Piazza, Agnès Thierry, Angela Taddei, Frédéric Beckouët, Julien Mozziconacci, Romain Koszul, Sequence-dependent activity and compartmentalization of foreign DNA in a eukaryotic nucleus, Science, 2025, 387 (6734), pp.eadm9466. ⟨10.1126/science.adm9466⟩.

Liu J, Lelek M, Yang Y, Salles A, Zimmer C, Shen Y, Krupovic M, A relay race of ESCRT-III paralogs drives cell division in a hyperthermophilic archaeon., mBio 2025 Feb; 16(2): e0099124.

Mesquita Peixoto M, Soares-da-Silva F, Bonnet V, Zhou Y, Ronteix G, Santos RF, Mailhe MP, Nogueira G, Feng X, Pereira JP, Azzoni E, Anselmi G, de Bruijn MFTR, Perkins A, Baroud CN, Pinto-do-Ó P, Cumano A, Spatiotemporal dynamics of fetal liver hematopoietic niches., J Exp Med 2025 Feb; 222(2): .

Dejoux A, Zhu Q, Woolfe A, Godon O, Ellouze S, Mottet G, Castrillon C, Gillis C, Pecalvel C, Ganneau C, Iannascoli B, Lemoine F, Saul F, England P, Reber LL, Gouel-Chéron A, de Chaisemartin L, Haouz A, Millot GA, Bay S, Gérard A, Jönsson F, Chollet-Martin S, Bruhns P, Antibody-secreting cell repertoires hold high-affinity anti-rocuronium specificities that can induce anaphylaxis in vivo., J Allergy Clin Immunol 2025 Jan; (): .

Maxime Lehman, Chloé Barré, Md Amit Hasan, Benjamin Flament, Sandra Autran, Neena Dhiman, Peter Soba, Jean-Baptiste Masson, Tihana Jovanic, Neural circuits underlying context-dependent competition between defensive actions in Drosophila larvae, Nature Communications, 2025, 16 (1), pp.1120. ⟨10.1038/s41467-025-56185-2⟩.

Lehman M, Barré C, Hasan MA, Flament B, Autran S, Dhiman N, Soba P, Masson JB, Jovanic T, Neural circuits underlying context-dependent competition between defensive actions in Drosophila larvae., Nat Commun 2025 Jan; 16(1): 1120.

Michella Khoury Damaa, Jacques Serizay, Rémi Balagué, Amélie-Rose Boudjema, Marion Faucourt, Nathalie Delgehyr, Kim Jee Goh, Hao Lu, Ee Kim Tan, Cameron T James, Catherine Faucon, Rana Mitri, Diana Carolin Bracht, Colin D Bingle, Norris Ray Dunn, Sebastian J Arnold, Laure-Emmanuelle Zaragosi, Pascal Barbry, Romain Koszul, Heymut Omran, Gabriel Gil-Gómez, Estelle Escudier, Marie Legendre, Sudipto Roy, Nathalie Spassky, Alice Meunier, Cyclin O controls entry into the cell-cycle variant required for multiciliated cell differentiation, Cell Reports, 2025, 44 (1), pp.115117. ⟨10.1016/j.celrep.2024.115117⟩.

Geiselmann A, Micouin A, Vandormael-Pournin S, Laville V, Chervova A, Mella S, Navarro P, Cohen-Tannoudji M, PI3K/AKT signaling controls ICM maturation and proper epiblast and primitive endoderm specification in mice., Dev Cell 2025 Jan; 60(2): 204-219.e6.

Puszko AK, Batista FA, Ejjoummany A, Bouillon A, Maurel M, Adler P, Legru A, Martinez M, Ortega Varga L, Hadjadj M, Alzari PM, Blondel A, Haouz A, Barale JC, Hernandez JF, Towards Improved Peptidic α-Ketoamide Inhibitors of the Plasmodial Subtilisin-Like SUB1: Exploration of N-Terminal Extensions and Cyclic Constraints., ChemMedChem 2025 Jan; (): e202400924.

Blanc T, Godard C, Grevent D, El Beheiry M, Salomon LJ, Hajj B, Masson JB, Photorealistic rendering of fetal faces from raw magnetic resonance imaging data., Ultrasound Obstet Gynecol 2025 Jan; (): .

Niault T, Talavera A, Le Cam E, Baconnais S, Skovgaard O, Fournes F, Wagner L, Tamman H, Thompson A, Echemendia-Blanco D, Guzzi N, Garcia-Pino A, Mazel D, Val ME, Dynamic transitions of initiator binding coordinate the replication of the two chromosomes in Vibrio cholerae., Nat Commun 2025 Jan; 16(1): 485.

M Doggaz, Anne Brelot, Jean-Christophe Olivo-Marin, Thibault Lagache, Giacomo Nardi, Neural-network model for characterizing stochastic dynamic variability of cellular particles, International Symposium on Biomedical Imaging, 2025..

Fruchard L, Babosan A, Carvalho A, Lang M, Li B, Duchateau M, Giai Gianetto Q, Matondo M, Bonhomme F, Hatin I, Arbes H, Fabret C, Corler E, Sanchez G, Marchand V, Motorin Y, Namy O, de Crécy-Lagard V, Mazel D, Baharoglu Z, Aminoglycoside tolerance in Vibrio cholerae engages translational reprogramming associated with queuosine tRNA modification., Elife 2025 Jan; 13(): .

Sierri G, Saenz-de-Santa-Maria I, Renda A, Koch M, Sommi P, Anselmi-Tamburini U, Mauri M, D'Aloia A, Ceriani M, Salerno D, Mantegazza F, Zurzolo C, Re F, Nanoparticle shape is the game-changer for blood-brain barrier crossing and delivery through tunneling nanotubes among glioblastoma cells., Nanoscale 2025 Jan; 17(2): 992-1006.

Angelica Frusteri Chiacchiera, Michela Casanova, Massimo Bellato, Aurora Piazza, Roberta Migliavacca, Grégory Batt, Paolo Magni, Lorenzo Pasotti, Harnessing CRISPR interference to resensitize laboratory strains and clinical isolates to last resort antibiotics, Scientific Reports, 2025, 15, pp.261. .

Audebert L, Saveanu C, Collart MA, Dynamic Evolution of Poly-A Tail Lengths Visualized by RNAse H Assay and Northern Blot Using Nonradioactive Probes in Yeast., Methods Mol Biol 2025 ; 2863(): 45-60.

Saveanu C, Minimal Perturbation Analysis of mRNA Degradation Rates with Tet-Off and RT-qPCR., Methods Mol Biol 2025 ; 2863(): 3-12.

Škarková A, Pelantová M, Tolde O, Legátová A, Mateu R, Bušek P, Garcia-Borja E, Šedo A, Etienne-Manneville S, Rösel D, Brábek J, Microtubule-associated NAV3 regulates invasive phenotypes in glioblastoma cells., Brain Pathol 2025 Jan; 35(1): e13294.

Vernuccio R, Martínez León A, Poojari CS, Buchrieser J, Selverian CN, Jaleta Y, Meola A, Guivel-Benhassine F, Porrot F, Haouz A, Chevreuil M, Raynal B, Mercer J, Simon-Loriere E, Chandran K, Schwartz O, Hub JS, Guardado-Calvo P, Structural insights into tecovirimat antiviral activity and poxvirus resistance., Nat Microbiol 2025 Mar; 10(3): 734-748.

Martínez-Carranza M, Vialle L, Madru C, Cordier F, Tekpinar AD, Haouz A, Legrand P, Le Meur RA, England P, Dulermo R, Guijarro JI, Henneke G, Sauguet L, Communication between DNA polymerases and Replication Protein A within the archaeal replisome., Nat Commun 2024 Dec; 15(1): 10926.

Serizay J, Khoury Damaa M, Boudjema AR, Balagué R, Faucourt M, Delgehyr N, Noûs C, Zaragosi LE, Barbry P, Spassky N, Koszul R, Meunier A, Cyclin switch tailors a cell cycle variant to orchestrate multiciliogenesis., Cell Rep 2024 Dec; (): 115103.

Patin E, Quintana-Murci L, Tracing the Evolution of Human Immunity Through Ancient DNA., Annu Rev Immunol 2024 Dec; (): .

Vorobevskaia E, Loot C, Mazel D, Schlierf M, The recombination efficiency of the bacterial integron depends on the mechanical stability of the synaptic complex., Sci Adv 2024 Dec; 10(50): eadp8756.

Arribas YA, Baudon B, Rotival M, Suárez G, Bonté PE, Casas V, Roubert A, Klein P, Bonnin E, Mchich B, Legoix P, Baulande S, Sadacca B, Diharce J, Waterfall JJ, Etchebest C, Carrascal M, Goudot C, Quintana-Murci L, Burbage M, Merlotti A, Amigorena S, Transposable element exonization generates a reservoir of evolving and functional protein isoforms., Cell 2024 Dec; (): .

Heude E, Dutel H, Sanchez-Garrido F, Prummel KD, Lalonde R, Lam F, Mosimann C, Herrel A, Tajbakhsh S, Co-option of neck muscles supported the vertebrate water-to-land transition., Nat Commun 2024 Dec; 15(1): 10564.

Hafner L, Gadin E, Huang L, Frouin A, Laporte F, Gaultier C, Vieira A, Maudet C, Varet H, Moura A, Bracq-Dieye H, Tessaud-Rita N, Maury M, Dazas M, Legendre R, Gastineau P, Tsai YH, Coppée JY, Charlier C, Patin E, Chikhi R, Rocha EPC, Leclercq A, Disson O, Aschard H, Lecuit M, Differential stress responsiveness determines intraspecies virulence heterogeneity and host adaptation in Listeria monocytogenes., Nat Microbiol 2024 Dec; 9(12): 3345-3361.

Alex Barbier-Chebbah, Christian L. Vestergaard, Jean-Baptiste Masson, Etienne Boursier, Approximate information maximization for bandit games, 2024.

von Stemann JH, Dubois F, Saint-André V, Bondet V, Posseme C, Charbit B, Quintana-Murci L, Hansen MB, Ostrowski SR, Duffy D, Cytokine Autoantibodies Alter Gene Expression Profiles of Healthy Donors., Eur J Immunol 2025 Jan; 55(1): e202451211.

Espinosa E, Challita J, Desfontaines JM, Possoz C, Val ME, Mazel D, Marbouty M, Koszul R, Galli E, Barre FX, MatP local enrichment delays segregation independently of tetramer formation and septal anchoring in Vibrio cholerae., Nat Commun 2024 Nov; 15(1): 9893.

Rosa F, Dray N, Bedu S, Bally-Cuif L, Non-apoptotic caspase events and Atf3 expression underlie direct neuronal differentiation of adult neural stem cells., Development 2024 Nov; 151(22): .

Korenkova O, Liu S, Prlesi I, Pepe A, Albadri S, Del Bene F, Zurzolo C, Tunneling nanotubes enable intercellular transfer in zebrafish embryos, Dev Cell . 2025 Feb 24;60(4):524-534.e3.

Chouly M, Bally-Cuif L, Generating neurons in the embryonic and adult brain: compared principles and mechanisms., C R Biol 2024 Nov; 347(): 199-221.

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Schoemans R, Aigrot MS, Wu C, Marée R, Hong P, Belachew S, Josse C, Lubetzki C, Bours V, Oligodendrocyte development and myelinogenesis are not impaired by high concentrations of phenylalanine or its metabolites, J. Inherit. Metab. Dis. 2010 Apr;33(2):113-20.

Chayot R, Montagne B, Mazel D, Ricchetti M, , An end-joining repair mechanism in Escherichia coli., Proc Natl Acad Sci U S A 2010 Feb; 107(5): 2141-6.

Sotomayor Pérez AC, Karst JC, Davi M, Guijarro JI, Ladant D, Chenal A, Characterization of the regions involved in the calcium-induced folding of the intrinsically disordered RTX motifs from the bordetella pertussis adenylate cyclase toxin, J. Mol. Biol. 2010 Mar;397(2):534-49.

Das B, Bischerour J, Val ME, Barre FX, Molecular keys of the tropism of integration of the cholera toxin phage., Proc Natl Acad Sci U S A 2010 Mar; 107(9): 4377-82.

Préhaud C, Wolff N, Terrien E, Lafage M, Mégret F, Babault N, Cordier F, Tan GS, Maitrepierre E, Ménager P, Chopy D, Hoos S, England P, Delepierre M, Schnell MJ, Buc H, Lafon M, Attenuation of rabies virulence: takeover by the cytoplasmic domain of its envelope protein, Sci Signal 2010 Jan;3(105):ra5.

Karst JC, Sotomayor Pérez AC, Guijarro JI, Raynal B, Chenal A, Ladant D, Calmodulin-induced conformational and hydrodynamic changes in the catalytic domain of Bordetella pertussis adenylate cyclase toxin, Biochemistry 2010 Jan;49(2):318-28.

San Millan A, Garcia-Cobos S, Escudero JA, Hidalgo L, Gutierrez B, Carrilero L, Campos J, Gonzalez-Zorn B, Haemophilus influenzae clinical isolates with plasmid pB1000 bearing blaROB-1: fitness cost and interspecies dissemination, Antimicrob. Agents Chemother. 2010 Apr;54(4):1506-11.

Ghoul BE, Squalli T, Servais A, Elie C, Meas-Yedid V, Trivint C, Vanmassenhove J, Grünfeld JP, Olivo-Marin JC, Thervet E, Noël LH, Prié D, Fakhouri F, Urinary procollagen III aminoterminal propeptide (PIIINP): a fibrotest for the nephrologist, Clin J Am Soc Nephrol 2010 Feb;5(2):205-10.

Wong Ng J, Chatenay D, Robert J, Poirier MG, Plasmid copy number noise in monoclonal populations of bacteria, Phys Rev E Stat Nonlin Soft Matter Phys 2010 Jan;81(1 Pt 1):011909.

Therizols P, Duong T, Dujon B, Zimmer C, Fabre E, Chromosome arm length and nuclear constraints determine the dynamic relationship of yeast subtelomeres, Proc. Natl. Acad. Sci. U.S.A. 2010 Feb;107(5):2025-30.

Duperthuy M, Binesse J, Le Roux F, Romestand B, Caro A, Got P, Givaudan A, Mazel D, Bachère E, Destoumieux-Garzón D, The major outer membrane protein OmpU of Vibrio splendidus contributes to host antimicrobial peptide resistance and is required for virulence in the oyster Crassostrea gigas, Environ. Microbiol. 2010 Apr;12(4):951-63.

Ray K, Bobard A, Danckaert A, Paz-Haftel I, Clair C, Ehsani S, Tang C, Sansonetti P, Tran GV, Enninga J, Tracking the dynamic interplay between bacterial and host factors during pathogen-induced vacuole rupture in real time, Cell. Microbiol. 2010 Apr;12(4):545-56.

Jové T, Da Re S, Denis F, Mazel D, Ploy MC, Inverse correlation between promoter strength and excision activity in class 1 integrons, PLoS Genet. 2010 Jan;6(1):e1000793.

Broutin I, Jomain JB, Tallet E, van Agthoven J, Raynal B, Hoos S, Kragelund BB, Kelly PA, Ducruix A, England P, Goffin V, Crystal structure of an affinity-matured prolactin complexed to its dimerized receptor reveals the topology of hormone binding site 2, J. Biol. Chem. 2010 Mar;285(11):8422-33.

Juillerat A, Igonet S, Vigan-Womas I, Guillotte M, Gangnard S, Faure G, Baron B, Raynal B, Mercereau-Puijalon O, Bentley GA, Biochemical and biophysical characterisation of DBL1alpha1-varO, the rosetting domain of PfEMP1 from the VarO line of Plasmodium falciparum, Mol. Biochem. Parasitol. 2010 Apr;170(2):84-92.

Berlemont S, Olivo-Marin JC, Combining local filtering and multiscale analysis for edge, ridge, and curvilinear objects detection, IEEE Trans Image Process 2010 Jan;19(1):74-84.

Marim M, Angelini E, Olivo-Marin JC, Denoising in fluorescence microscopy using compressed sensing with multiple reconstructions and non-local merging., Annu Int Conf IEEE Eng Med Biol Soc 2010 ; 2010(): 3394-7.

Simpson N, Audry L, Enninga J, Tracking the secretion of fluorescently labeled type III effectors from single bacteria in real time, Methods Mol. Biol. 2010;619:241-56.

Brigitte M, Schilte C, Plonquet A, Baba-Amer Y, Henri A, Charlier C, Tajbakhsh S, Albert M, Gherardi RK, Chrétien F, Muscle resident macrophages control the immune cell reaction in a mouse model of notexin-induced myoinjury, Arthritis Rheum. 2010 Jan;62(1):268-79.

Cambray G, Guerout AM, Mazel D, Integrons, Annu. Rev. Genet. 2010;44:141-66.

Guérin E, Cambray G, Da Re S, Mazel D, Ploy MC, [The SOS response controls antibiotic resistance by regulating the integrase of integrons], Med Sci (Paris) 2010 Jan;26(1):28-30.

El-Amraoui A, Petit C, , Cadherins as targets for genetic diseases., Cold Spring Harb Perspect Biol 2010 Jan; 2(1): a003095.

Marcio Marim, Michael Atlan, Elsa Angelini and Jean-Christophe Olivo-Marin, Compressed Sensing for Digital Holographic Microscopy, IEEE International Symposium on Biomedical Imaging, ISBI, 2010. Best Student Paper Award.

Nitzsche B, Bormuth V, Bräuer C, Howard J, Ionov L, Kerssemakers J, Korten T, Leduc C, Ruhnow F, Diez S, Studying kinesin motors by optical 3D-nanometry in gliding motility assays, Methods Cell Biol. 2010;95:247-71.

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Haiss F, Butovas S, Schwarz C, A miniaturized chronic microelectrode drive for awake behaving head restrained mice and rats, J. Neurosci. Methods 2010 Mar;187(1):67-72.

Caputo A, Sarnataro D, Campana V, Costanzo M, Negro A, Sorgato MC, Zurzolo C, Doppel and PrPC co-immunoprecipitate in detergent-resistant membrane domains of epithelial FRT cells, Biochem. J. 2010 Jan;425(2):341-51.

Neyrolles O, Quintana-Murci L, Sexual inequality in tuberculosis, PLoS Med. 2009 Dec;6(12):e1000199.

Etienne-Manneville S, From signaling pathways to microtubule dynamics: the key players, Curr. Opin. Cell Biol. 2010 Feb;22(1):104-11.

Ghosh A, Haiss F, Sydekum E, Schneider R, Gullo M, Wyss MT, Mueggler T, Baltes C, Rudin M, Weber B, Schwab ME, Rewiring of hindlimb corticospinal neurons after spinal cord injury, Nat. Neurosci. 2010 Jan;13(1):97-104.

Louicharoen C, Patin E, Paul R, Nuchprayoon I, Witoonpanich B, Peerapittayamongkol C, Casademont I, Sura T, Laird NM, Singhasivanon P, Quintana-Murci L, Sakuntabhai A, Positively selected G6PD-Mahidol mutation reduces Plasmodium vivax density in Southeast Asians, Science 2009 Dec;326(5959):1546-9.

Barreiro LB, Quintana-Murci L, From evolutionary genetics to human immunology: how selection shapes host defence genes, Nat. Rev. Genet. 2010 Jan;11(1):17-30.

Roux I, Hosie S, Johnson SL, Bahloul A, Cayet N, Nouaille S, Kros CJ, Petit C, Safieddine S, Myosin VI is required for the proper maturation and function of inner hair cell ribbon synapses., Hum Mol Genet 2009 Dec; 18(23): 4615-28.

Martínez L, Laine E, Malliavin TE, Nilges M, Blondel A, ATP conformations and ion binding modes in the active site of anthrax edema factor: a computational analysis, Proteins 2009 Dec;77(4):971-83.

Thierry A, Dujon B, Richard GF, Megasatellites: a new class of large tandem repeats discovered in the pathogenic yeast Candida glabrata, Cell. Mol. Life Sci. 2010 Mar;67(5):671-6.

Paz I, Sachse M, Dupont N, Mounier J, Cederfur C, Enninga J, Leffler H, Poirier F, Prevost MC, Lafont F, Sansonetti P, Galectin-3, a marker for vacuole lysis by invasive pathogens, Cell. Microbiol. 2010 Apr;12(4):530-44.

Nowlan NC, Bourdon C, Dumas G, Tajbakhsh S, Prendergast PJ, Murphy P, Developing bones are differentially affected by compromised skeletal muscle formation, Bone 2010 May;46(5):1275-85.

Leduc C, Campàs O, Joanny JF, Prost J, Bassereau P, Mechanism of membrane nanotube formation by molecular motors, Biochim. Biophys. Acta 2010 Jul;1798(7):1418-26.

Nury H, Bocquet N, Le Poupon C, Raynal B, Haouz A, Corringer PJ, Delarue M, Crystal structure of the extracellular domain of a bacterial ligand-gated ion channel, J. Mol. Biol. 2010 Feb;395(5):1114-27.

Frumerie C, Ducos-Galand M, Gopaul DN, Mazel D, The relaxed requirements of the integron cleavage site allow predictable changes in integron target specificity, Nucleic Acids Res. 2010 Jan;38(2):559-69.

Bouvier G, Evrard-Todeschi N, Girault JP, Bertho G, Automatic clustering of docking poses in virtual screening process using self-organizing map, Bioinformatics 2010 Jan;26(1):53-60.

Marcio Marim, Elsa Angelini and Jean-Christophe Olivo-Marin, Compressed Sensing in microscopy with random projections in the Fourier domain, Image Processing (ICIP), 2009 16th IEEE International Conference on.

Servais A, Meas-Yedid V, Morelon E, Strupler M, Schanne-Klein MC, Legendre C, Olivo-Marin JC, Thervet E, [Recent approaches of quantification of interstitial fibrosis in renal transplantation], Med Sci (Paris) 2009 Nov;25(11):945-50.

Servais A, Meas-Yedid V, Toupance O, Lebranchu Y, Thierry A, Moulin B, Etienne I, Presne C, Hurault de LB, Le Pogamp P, Le Meur Y, Glotz D, Hayem C, Olivo Marin JC, Thervet E, Interstitial fibrosis quantification in renal transplant recipients randomized to continue cyclosporine or convert to sirolimus, Am. J. Transplant. 2009 Nov;9(11):2552-60.

Michalski N, Michel V, Caberlotto E, Lefèvre GM, van Aken AF, Tinevez JY, Bizard E, Houbron C, Weil D, Hardelin JP, Richardson GP, Kros CJ, Martin P, Petit C, , Harmonin-b, an actin-binding scaffold protein, is involved in the adaptation of mechanoelectrical transduction by sensory hair cells., Pflugers Arch 2009 Nov; 459(1): 115-30.

Tajbakhsh S, Gonzalez C, Biased segregation of DNA and centrosomes: moving together or drifting apart?, Nat. Rev. Mol. Cell Biol. 2009 Nov;10(11):804-10.

Jory A, Le Roux I, Gayraud-Morel B, Rocheteau P, Cohen-Tannoudji M, Cumano A, Tajbakhsh S, Numb promotes an increase in skeletal muscle progenitor cells in the embryonic somite, Stem Cells 2009 Nov;27(11):2769-80.

Saade E, Mechold U, Kulyyassov A, Vertut D, Lipinski M, Ogryzko V, Analysis of interaction partners of H4 histone by a new proteomics approach, Proteomics 2009 Nov;9(21):4934-43.

del Castillo FJ, Cohen-Salmon M, Charollais A, Caille D, Lampe PD, Chavrier P, Meda P, Petit C, Consortin, a trans-Golgi network cargo receptor for the plasma membrane targeting and recycling of connexins, Hum. Mol. Genet. 2010 Jan;19(2):262-75.

Pothlichet J, Burtey A, Kubarenko AV, Caignard G, Solhonne B, Tangy F, Ben-Ali M, Quintana-Murci L, Heinzmann A, Chiche JD, Vidalain PO, Weber AN, Chignard M, Si-Tahar M, Study of human RIG-I polymorphisms identifies two variants with an opposite impact on the antiviral immune response, PLoS ONE 2009;4(10):e7582.

Saul FA, Prijatelj-Znidarsic P, Vulliez-le Normand B, Villette B, Raynal B, Pungercar J, Krizaj I, Faure G, Comparative structural studies of two natural isoforms of ammodytoxin, phospholipases A2 from Vipera ammodytes ammodytes which differ in neurotoxicity and anticoagulant activity, J. Struct. Biol. 2010 Mar;169(3):360-9.

Grubisha O, Kaminska M, Duquerroy S, Fontan E, Cordier F, Haouz A, Raynal B, Chiaravalli J, Delepierre M, Israël A, Véron M, Agou F, DARPin-assisted crystallography of the CC2-LZ domain of NEMO reveals a coupling between dimerization and ubiquitin binding, J. Mol. Biol. 2010 Jan;395(1):89-104.

Koszul R, Kleckner N, Dynamic chromosome movements during meiosis: a way to eliminate unwanted connections?, Trends Cell Biol. 2009 Dec;19(12):716-24.

Coolen M, Bally-Cuif L, MicroRNAs in brain development and physiology, Curr. Opin. Neurobiol. 2009 Oct;19(5):461-70.

Hjerpe R, Aillet F, Lopitz-Otsoa F, Lang V, England P, Rodriguez MS, Efficient protection and isolation of ubiquitylated proteins using tandem ubiquitin-binding entities, EMBO Rep. 2009 Nov;10(11):1250-8.

Zagnoni M, Baroud CN, Cooper JM, Electrically initiated upstream coalescence cascade of droplets in a microfluidic flow, Phys Rev E Stat Nonlin Soft Matter Phys 2009 Oct;80(4 Pt 2):046303.

Gros J, [Cell movements break left/right symmetry in the chick embryo], Med Sci (Paris) 2009 Oct;25(10):777-9.

Souciet JL, Dujon B, Gaillardin C, Johnston M, Baret PV, Cliften P, Sherman DJ, Weissenbach J, Westhof E, Wincker P, Jubin C, Poulain J, Barbe V, Ségurens B, Artiguenave F, Anthouard V, Vacherie B, Val ME, Fulton RS, Minx P, Wilson R, Durrens P, Jean G, Marck C, Martin T, Nikolski M, Rolland T, Seret ML, Casarégola S, Despons L, Fairhead C, Fischer G, Lafontaine I, Leh V, Lemaire M, de Montigny J, Neuvéglise C, Thierry A, Blanc-Lenfle I, Bleykasten C, Diffels J, Fritsch E, Frangeul L, Goëffon A, Jauniaux N, Kachouri-Lafond R, Payen C, Potier S, Pribylova L, Ozanne C, Richard GF, Sacerdot C, Straub ML, Talla E, Comparative genomics of protoploid Saccharomycetaceae., Genome Res 2009 Oct; 19(10): 1696-709.

Tajbakhsh S, Skeletal muscle stem cells in developmental versus regenerative myogenesis, J. Intern. Med. 2009 Oct;266(4):372-89.

Ghosh A, Sydekum E, Haiss F, Peduzzi S, Zörner B, Schneider R, Baltes C, Rudin M, Weber B, Schwab ME, Functional and anatomical reorganization of the sensory-motor cortex after incomplete spinal cord injury in adult rats, J. Neurosci. 2009 Sep;29(39):12210-9.

Gutierrez B, Herrera-Leon S, Escudero JA, Hidalgo L, Gonzalez-Sanz R, Arroyo M, San Millan A, Echeita MA, Gonzalez-Zorn B, Novel genetic environment of qnrB2 associated with TEM-1 and SHV-12 on pB1004, an IncHI2 plasmid, in Salmonella Bredeney BB1047 from Spain, J. Antimicrob. Chemother. 2009 Dec;64(6):1334-6.

Varga V*, Leduc C*, Bormuth V, Diez S, Howard J, Kinesin-8 motors act cooperatively to mediate length-dependent microtubule depolymerization, Cell 2009 Sep;138(6):1174-83.

Guarnera E, Pellarin R, Caflisch A, How does a simplified-sequence protein fold?, Biophys. J. 2009 Sep;97(6):1737-46.

Lazarini F, Mouthon MA, Gheusi G, de Chaumont F, Olivo-Marin JC, Lamarque S, Abrous DN, Boussin FD, Lledo PM, Cellular and behavioral effects of cranial irradiation of the subventricular zone in adult mice, PLoS ONE 2009;4(9):e7017.

Marcio de Moraes Marim, Elsa D. Angelini, Jean-Christophe Olivo-Marin, Compressed sensing in biological microscopy, Proc. SPIE 7446, Wavelets XIII, 744605 (September 04, 2009); doi:10.1117/12.826275.

Ortiz M, Guex N, Patin E, Martin O, Xenarios I, Ciuffi A, Quintana-Murci L, Telenti A, Evolutionary trajectories of primate genes involved in HIV pathogenesis, Mol. Biol. Evol. 2009 Dec;26(12):2865-75.

Shoji H, Deltour L, Nakamura T, Tajbakhsh S, Poirier F, Expression pattern and role of Galectin1 during early mouse myogenesis, Dev. Growth Differ. 2009 Sep;51(7):607-15.

Bouvier M, Ducos-Galand M, Loot C, Bikard D, Mazel D, Structural features of single-stranded integron cassette attC sites and their role in strand selection., PLoS Genet 2009 Sep; 5(9): e1000632.

Heyer E, Balaresque P, Jobling MA, Quintana-Murci L, Chaix R, Segurel L, Aldashev A, Hegay T, Genetic diversity and the emergence of ethnic groups in Central Asia, BMC Genet. 2009;10:49.

del Alamo D, Schweisguth F, Notch signalling: receptor cis-inhibition to achieve directionality, Curr. Biol. 2009 Aug;19(16):R683-4.

Castets P, Maugenre S, Gartioux C, Rederstorff M, Krol A, Lescure A, Tajbakhsh S, Allamand V, Guicheney P, Selenoprotein N is dynamically expressed during mouse development and detected early in muscle precursors, BMC Dev. Biol. 2009;9:46.

Aloui Z, Hoos S, Geretti E, Kharmachi H, Haumont PY, Mejdoub H, Klagsbrun M, England P, Gasmi A, Novel svVEGF isoforms from Macrovipera lebetina venom interact with neuropilins, Biochem. Biophys. Res. Commun. 2009 Nov;389(1):10-5.

El-Sibai M, Platt DE, Haber M, Xue Y, Youhanna SC, Wells RS, Izaabel H, Sanyoura MF, Harmanani H, Bonab MA, Behbehani J, Hashwa F, Tyler-Smith C, Zalloua PA, , Geographical structure of the Y-chromosomal genetic landscape of the Levant: a coastal-inland contrast, Ann. Hum. Genet. 2009 Nov;73(Pt 6):568-81.

Zakharov P, Völker AC, Wyss MT, Haiss F, Calcinaghi N, Zunzunegui C, Buck A, Scheffold F, Weber B, Dynamic laser speckle imaging of cerebral blood flow, Opt Express 2009 Aug;17(16):13904-17.

Pankajakshan P, Zhang B, Blanc-Féraud L, Kam Z, Olivo-Marin JC, Zerubia J, Blind deconvolution for thin-layered confocal imaging, Appl Opt 2009 Aug;48(22):4437-48.

Webb KJ, Norton WH, Trümbach D, Meijer AH, Ninkovic J, Topp S, Heck D, Marr C, Wurst W, Theis FJ, Spaink HP, Bally-Cuif L, Zebrafish reward mutants reveal novel transcripts mediating the behavioral effects of amphetamine, Genome Biol. 2009;10(7):R81.

Isabet T, Montagnac G, Regazzoni K, Raynal B, El Khadali F, England P, Franco M, Chavrier P, Houdusse A, Ménétrey J, The structural basis of Arf effector specificity: the crystal structure of ARF6 in a complex with JIP4, EMBO J. 2009 Sep;28(18):2835-45.

Soler Bistué AJ, Martín FA, Vozza N, Ha H, Joaquín JC, Zorreguieta A, Tolmasky ME, Inhibition of aac(6′)-Ib-mediated amikacin resistance by nuclease-resistant external guide sequences in bacteria, Proc. Natl. Acad. Sci. U.S.A. 2009 Aug;106(32):13230-5.

Lecut C, Frederix K, Johnson DM, Deroanne C, Thiry M, Faccinetto C, Marée R, Evans RJ, Volders PG, Bours V, Oury C, P2X1 ion channels promote neutrophil chemotaxis through Rho kinase activation, J. Immunol. 2009 Aug;183(4):2801-9.

Knapp O, Maier E, Mkaddem SB, Benz R, Bens M, Chenal A, Geny B, Vandewalle A, Popoff MR, Clostridium septicum alpha-toxin forms pores and induces rapid cell necrosis, Toxicon 2010 Jan;55(1):61-72.

Bradley J, Luo R, Otis TS, DiGregorio DA, Submillisecond optical reporting of membrane potential in situ using a neuronal tracer dye, J. Neurosci. 2009 Jul;29(29):9197-209.

Enninga J, Rosenshine I, Imaging the assembly, structure and activity of type III secretion systems, Cell. Microbiol. 2009 Oct;11(10):1462-70.

Barreiro LB, Ben-Ali M, Quach H, Laval G, Patin E, Pickrell JK, Bouchier C, Tichit M, Neyrolles O, Gicquel B, Kidd JR, Kidd KK, Alcaïs A, Ragimbeau J, Pellegrini S, Abel L, Casanova JL, Quintana-Murci L, Evolutionary dynamics of human Toll-like receptors and their different contributions to host defense, PLoS Genet. 2009 Jul;5(7):e1000562.

Mhlanga MM, Bratu DP, Genovesio A, Rybarska A, Chenouard N, Nehrbass U, Olivo-Marin JC, In vivo colocalisation of oskar mRNA and trans-acting proteins revealed by quantitative imaging of the Drosophila oocyte, PLoS ONE 2009;4(7):e6241.

Wyss MT, Obrist NM, Haiss F, Eckert R, Stanley R, Burger C, Buck A, Weber B, A beta-scintillator for surface measurements of radiotracer kinetics in the intact rodent cortex, Neuroimage 2009 Nov;48(2):339-47.

Chenal A, Prongidi-Fix L, Perier A, Aisenbrey C, Vernier G, Lambotte S, Haertlein M, Dauvergne MT, Fragneto G, Bechinger B, Gillet D, Forge V, Ferrand M, Deciphering membrane insertion of the diphtheria toxin T domain by specular neutron reflectometry and solid-state NMR spectroscopy, J. Mol. Biol. 2009 Sep;391(5):872-83.

Marcio Marim, Elsa Angelini and Jean-Christophe Olivo-Marin, A compressed sensing approach for biological microscopic image processing, Biomedical Imaging: From Nano to Macro, 2009. ISBI '09. IEEE International Symposium on.

Fang M, Zeisberg WM, Condon C, Ogryzko V, Danchin A, Mechold U, Degradation of nanoRNA is performed by multiple redundant RNases in Bacillus subtilis, Nucleic Acids Res. 2009 Aug;37(15):5114-25.

Guillière F, Peixeiro N, Kessler A, Raynal B, Desnoues N, Keller J, Delepierre M, Prangishvili D, Sezonov G, Guijarro JI, Structure, function, and targets of the transcriptional regulator SvtR from the hyperthermophilic archaeal virus SIRV1, J. Biol. Chem. 2009 Aug;284(33):22222-37.

Chanet S, Vodovar N, Mayau V, Schweisguth F, Genome engineering-based analysis of Bearded family genes reveals both functional redundancy and a nonessential function in lateral inhibition in Drosophila, Genetics 2009 Aug;182(4):1101-8.

San Millan A, Escudero JA, Gutierrez B, Hidalgo L, Garcia N, Llagostera M, Dominguez L, Gonzalez-Zorn B, Multiresistance in Pasteurella multocida is mediated by coexistence of small plasmids, Antimicrob. Agents Chemother. 2009 Aug;53(8):3399-404.

Coureuil M, Mikaty G, Miller F, Lécuyer H, Bernard C, Bourdoulous S, Duménil G, Mège RM, Weksler BB, Romero IA, Couraud PO, Nassif X, Meningococcal type IV pili recruit the polarity complex to cross the brain endothelium, Science 2009 Jul;325(5936):83-7.

Chatre L, Wattelet-Boyer V, Melser S, Maneta-Peyret L, Brandizzi F, Moreau P, A novel di-acidic motif facilitates ER export of the syntaxin SYP31, J. Exp. Bot. 2009;60(11):3157-65.

Sarnataro D, Caputo A, Casanova P, Puri C, Paladino S, Tivodar SS, Campana V, Tacchetti C, Zurzolo C, Lipid rafts and clathrin cooperate in the internalization of PrP in epithelial FRT cells, PLoS ONE 2009;4(6):e5829.

Harvey RP, Meilhac SM, Buckingham ME, Landmarks and lineages in the developing heart., Circ Res 2009 Jun; 104(11): 1235-7.

Chenouard N, Dufour A, Olivo-Marin JC, Tracking algorithms chase down pathogens, Biotechnol J 2009 Jun;4(6):838-45.

Sambasivan R, Gayraud-Morel B, Dumas G, Cimper C, Paisant S, Kelly RG, Kelly R, Tajbakhsh S, Distinct regulatory cascades govern extraocular and pharyngeal arch muscle progenitor cell fates, Dev. Cell 2009 Jun;16(6):810-21.

Dupin I, Camand E, Etienne-Manneville S, Classical cadherins control nucleus and centrosome position and cell polarity, J. Cell Biol. 2009 Jun;185(5):779-86.

Jacquier H, Zaoui C, Sanson-le Pors MJ, Mazel D, Berçot B, Translation regulation of integrons gene cassette expression by the attC sites, Mol. Microbiol. 2009 Jun;72(6):1475-86.

Petit C, Richardson GP, Linking genes underlying deafness to hair-bundle development and function, Nat. Neurosci. 2009 Jun;12(6):703-10.

Guerin E, Cambray G, Sanchez-Alberola N, Campoy S, Erill I, Da Re S, Gonzalez-Zorn B, Barbé J, Ploy MC, Mazel D, The SOS response controls integron recombination, Science 2009 May;324(5930):1034.

Bardiaux B, Bernard A, Rieping W, Habeck M, Malliavin TE, Nilges M, Influence of different assignment conditions on the determination of symmetric homodimeric structures with ARIA, Proteins 2009 May;75(3):569-85.

Delfini MC, De La Celle M, Gros J, Serralbo O, Marics I, Seux M, Scaal M, Marcelle C, The timing of emergence of muscle progenitors is controlled by an FGF/ERK/SNAIL1 pathway, Dev. Biol. 2009 Sep;333(2):229-37.

Aisenbrey C, Prongidi-Fix L, Chenal A, Gillet D, Bechinger B, Side chain resonances in static oriented proton-decoupled 15N solid-state NMR spectra of membrane proteins, J. Am. Chem. Soc. 2009 May;131(18):6340-1.

Marijanovic Z, Caputo A, Campana V, Zurzolo C, Identification of an intracellular site of prion conversion, PLoS Pathog. 2009 May;5(5):e1000426.

Konto-Ghiorghi Y, Mairey E, Mallet A, Duménil G, Caliot E, Trieu-Cuot P, Dramsi S, Dual role for pilus in adherence to epithelial cells and biofilm formation in Streptococcus agalactiae, PLoS Pathog. 2009 May;5(5):e1000422.

Meilhac SM, Adams RJ, Morris SA, Danckaert A, Le Garrec JF, Zernicka-Goetz M, Active cell movements coupled to positional induction are involved in lineage segregation in the mouse blastocyst, Dev. Biol. 2009 Jul;331(2):210-21.

Verneuil E, Cordero M, Gallaire F, Baroud CN, Laser-induced force on a microfluidic drop: origin and magnitude, Langmuir 2009 May;25(9):5127-34.

Bahloul A, Simmler MC, Michel V, Leibovici M, Perfettini I, Roux I, Weil D, Nouaille S, Zuo J, Zadro C, Licastro D, Gasparini P, Avan P, Hardelin JP, Petit C, Vezatin, an integral membrane protein of adherens junctions, is required for the sound resilience of cochlear hair cells, EMBO Mol Med 2009 May;1(2):125-38.

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Bellaïche Y, Schweisguth F, Lineage diversity in the Drosophila nervous system, Curr. Opin. Genet. Dev. 2001 Aug;11(4):418-23.

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Quintana-Murci L, Fellous M, The Human Y Chromosome: The Biological Role of a “Functional Wasteland”, J. Biomed. Biotechnol. 2001;1(1):18-24.

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Lecourtois M, Schweisguth F, Indirect evidence for Delta-dependent intracellular processing of notch in Drosophila embryos, Curr. Biol. 1998 Jun;8(13):771-4.

Arhets P, Olivo JC, Gounon P, Sansonetti P, Guillén N, Virulence and functions of myosin II are inhibited by overexpression of light meromyosin in Entamoeba histolytica, Mol. Biol. Cell 1998 Jun;9(6):1537-47.

Gho M, Schweisguth F, Frizzled signalling controls orientation of asymmetric sense organ precursor cell divisions in Drosophila, Nature 1998 May;393(6681):178-81.

Karimova G, Pidoux J, Ullmann A, Ladant D, A bacterial two-hybrid system based on a reconstituted signal transduction pathway, Proc. Natl. Acad. Sci. U.S.A. 1998 May;95(10):5752-6.

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Pugsley AP, Francetic O, Protein secretion in Escherichia coli K-12: dead or alive?, Cell. Mol. Life Sci. 1998 Apr;54(4):347-52.

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Francetić O, Lory S, Pugsley AP, A second prepilin peptidase gene in Escherichia coli K-12, Mol. Microbiol. 1998 Feb;27(4):763-75.

Blocker A, Griffiths G, Olivo JC, Hyman AA, Severin FF, A role for microtubule dynamics in phagosome movement, J. Cell. Sci. 1998 Feb;111 ( Pt 3):303-12.

Tajbakhsh S, Spörle R, Somite development: constructing the vertebrate body, Cell 1998 Jan;92(1):9-16.

Röttger S, White J, Wandall HH, Olivo JC, Stark A, Bennett EP, Whitehouse C, Berger EG, Clausen H, Nilsson T, Localization of three human polypeptide GalNAc-transferases in HeLa cells suggests initiation of O-linked glycosylation throughout the Golgi apparatus, J. Cell. Sci. 1998 Jan;111 ( Pt 1):45-60.

Capell A, Saffrich R, Olivo JC, Meyn L, Walter J, Grünberg J, Mathews P, Nixon R, Dotti C, Haass C, Cellular expression and proteolytic processing of presenilin proteins is developmentally regulated during neuronal differentiation, J. Neurochem. 1997 Dec;69(6):2432-40.

Hémar A, Olivo JC, Williamson E, Saffrich R, Dotti CG, Dendroaxonal transcytosis of transferrin in cultured hippocampal and sympathetic neurons, J. Neurosci. 1997 Dec;17(23):9026-34.

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Ricchetti M, Buc H, Telomerase activity of reverse transcriptase, Science 1997 Aug;277(5328):887.

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Schweisguth F, Posakony JW, Antagonistic activities of Suppressor of Hairless and Hairless control alternative cell fates in the Drosophila adult epidermis, Development 1994 Jun;120(6):1433-41.

Malke H, Mechold U, Gase K, Gerlach D, Inactivation of the streptokinase gene prevents Streptococcus equisimilis H46A from acquiring cell-associated plasmin activity in the presence of plasminogen, FEMS Microbiol. Lett. 1994 Feb;116(1):107-12.

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Mechold U, Steiner K, Vettermann S, Malke H, Genetic organization of the streptokinase region of the Streptococcus equisimilis H46A chromosome, Mol. Gen. Genet. 1993 Oct;241(1-2):129-40.

Mark M, Lufkin T, Vonesch JL, Ruberte E, Olivo JC, Dollé P, Gorry P, Lumsden A, Chambon P, Two rhombomeres are altered in Hoxa-1 mutant mice, Development 1993 Oct;119(2):319-38.

Ibnsouda S, Schweisguth F, de Billy G, Vincent A, Relationship between expression of serendipity alpha and cellularisation of the Drosophila embryo as revealed by interspecific transformation, Development 1993 Oct;119(2):471-83.

Francetić O, Hanson MP, Kumamoto CA, prlA suppression of defective export of maltose-binding protein in secB mutants of Escherichia coli, J. Bacteriol. 1993 Jul;175(13):4036-44.

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Schweisguth F, Posakony JW, Suppressor of Hairless, the Drosophila homolog of the mouse recombination signal-binding protein gene, controls sensory organ cell fates, Cell 1992 Jun;69(7):1199-212.

Oliver SG, van der Aart QJ, Agostoni-Carbone ML, Aigle M, Alberghina L, Alexandraki D, Antoine G, Anwar R, Ballesta JP, Benit P, The complete DNA sequence of yeast chromosome III, Nature 1992 May;357(6373):38-46.

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Fragu P, Halpern S, Briançon C, Olivo JC, Kahn E, [Functional microscopic imaging of the thyroid gland with the help of analytical ion microscopy], Pathol. Biol. 1991 Dec;39(10):1029-37.

Olivo JC, Kahn E, Halpern S, Fragu P, Image registration and distortion correction in ion microscopy, J Microsc 1991 Dec;164(Pt 3):263-72.

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Grégoire C, Rebaï N, Schweisguth F, Necker A, Mazza G, Auphan N, Millward A, Schmitt-Verhulst AM, Malissen B, Engineered secreted T-cell receptor alpha beta heterodimers, Proc. Natl. Acad. Sci. U.S.A. 1991 Sep;88(18):8077-81.

Shmelev VA, Cherepanov PA, Nosova LIu, Karimova GA, Popov SG, Noskov AN, [Specific proteolysis by fibrinolysin-coagulase from Yersinia pestis of Yersinia pseudotuberculosis outer membrane proteins coded by the Ca(2+)-dependence plasmid], Mol. Gen. Mikrobiol. Virusol. 1991 Jan;(1):21-4.

Schweisguth F, Vincent A, Lepesant JA, Genetic analysis of the cellularization of the Drosophila embryo, Biol. Cell 1991;72(1-2):15-23.

Olivo JC, Kahn E, Halpern S, Fragu P, Digital correlation of ion and optical microscopic images: application to the study of thyroglobulin chemical modification, Scanning Microsc. 1990 Dec;4(4):825-8.

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Jovanic T, Winding M, Cardona A, Truman JW, Gershow M, Zlatic M, , Neural Substrates of Drosophila Larval Anemotaxis., Curr Biol 2019 02; 29(4): 554-566.e4.