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© Laurent Debarbieux
Bactériophages sur la bactérie Escherichia coli 0104:H4 souche 55989.
Publication : Microbiology resource announcements

Closed and High-Quality Bacterial Genome Sequences of the Oligo-Mouse-Microbiota Community.

Team: Bacteriophage, bacterium, host
Team: Spatial Regulation of Genomes
Member: Laurent Debarbieux
Member: Romain Koszul
Member: Martial Marbouty
Scientific Fields
Diseases
Organisms
Applications
Technique

Published in Microbiology resource announcements - 29 Apr 2021

Lamy-Besnier Q, Koszul R, Debarbieux L, Marbouty M,

Link to Pubmed [PMID] – 33927045

Link to DOI – e01396-2010.1128/MRA.01396-20

Microbiol Resour Announc 2021 Apr; 10(17):

The Oligo-Mouse-Microbiota (OMM12) gnotobiotic murine model is an increasingly popular model in microbiota studies. However, following Illumina and PacBio sequencing, the genomes of the 12 strains could not be closed. Here, we used genomic chromosome conformation capture (Hi-C) data to reorganize, close, and improve the quality of these 12 genomes.