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Deputy Director of Department
Deputy Director of National Reference Center
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Department: Infection & Epidemiology

All Publications

Feige L, Young K, Cerapio JP, Kozaki T, Kergoat L, Libri V, Ginhoux F, Hasan M, Ben Ameur L, Chin G, Goode Z, Bourhy H, Saunders A, Human brain cell types shape host-rabies virus transcriptional interactions revealing a preexisting pro-viral astrocyte subpopulation., Cell Rep 2025 Aug; 44(9): 116159.

Perlant C, Klitting R, Colizza V, Gaythorpe KAM, Gabiane G, Lamballerie X, Failloux AB, Cauchemez S, Bosetti P, A framework to assess the risk of Yellow Fever emergence., J Travel Med 2025 Aug; (): .

Coleon A, Larrous F, Kergoat L, Tichit M, Hardy D, Obadia T, Kornobis E, Bourhy H, de Melo GD, Hamsters with long COVID present distinct transcriptomic profiles associated with neurodegenerative processes in brainstem, Nat Commun 2025 Jul; 16(1): 6714.

Flavio Alvarez, Guilherme Dias de Melo, Florence Larrous, Lauriane Kergoat, Batiste Boëda, Vincent Michel, Danielle Seilhean, Magali Tichit, David Hing, David Hardy, Etienne Kornobis, Hervé Bourhy, Nicolas Wolff, Célia Caillet-Saguy, The SARS-CoV-2 envelope PDZ binding motif acts as a virulence factor disrupting host’s epithelial cell–cell junctions [brief report], Cellular and Molecular Biology Letters, 2025, 30 (1), pp.80. ⟨10.1186/s11658-025-00758-y⟩.

Adeline Pastuszka, Maria-Vittoria Mazzuoli, Chiara Crestani, Léonie Deborde, Odile Sismeiro, Coralie Lemaire, Vanessa Rong, Myriam Gominet, Elise Jacquemet, Rachel Legendre, Philippe Lanotte, Arnaud Firon, The virulence regulator CovR boosts CRISPR-Cas9 immunity in Group B Streptococcus, Nature Communications, 2025, 16 (1), pp.5678. ⟨10.1038/s41467-025-60871-6⟩.

Gaston Bizel-Bizellot, Simon Galmiche, Benoît Lelandais, Tiffany Charmet, Laurent Coudeville, Arnaud Fontanet, Christophe Zimmer, Extracting circumstances of Covid-19 transmission from free text with large language models, Nature Communications, 2025, 16 (1), pp.5836. ⟨10.1038/s41467-025-60762-w⟩.

Rasoamalala F, Ramasindrazana B, Parany MJ, Rahajandraibe S, Randriantseheno L, Rahelinirina S, Gorgé O, Valade E, Harimalala M, Rajerison M, Cauchemez S, Brault A, Unraveling the role of rat and flea population dynamics on the seasonality of plague epidemics in Madagascar., Proc Natl Acad Sci U S A 2025 Jun; 122(24): e2502161122.

Vincent Legros, Essia Belarbi, Patricia Jeannin, Virginie Geolier, Beate Kümmerer, David Hardy, Philippe Desprès, Antoine Gessain, Pierre Roques, Pierre-Emmanuel Ceccaldi, Valérie Choumet, Use of Recombinant Chikungunya Virus expressing Nanoluciferase to Identify Chondrocytes as Target Cells in an Immunocompetent Mouse Model, Journal of Infectious Diseases, In press, pp.jiaf232. ⟨10.1093/infdis/jiaf232⟩.

Taha S, Terrade A, Doucoure O, Deghmane AE, Taha MK, Troubled Times, Changing Tides: A Seroprevalence Study on Meningococcal Immunity in France Between 2016 and 2024., Vaccines (Basel) 2025 Jun; 13(6): .

Dussault JM, Rivera Torres AF, Oudin Doglioni D, Gagneux-Brunon A, Le Duc-Banaszuk AS, Bruel S, Michel M, Gauchet A, Barret AS, Sicsic J, Raude J, Thilly N, Mueller JE, The effect of school-based interventions on HPV vaccine-related knowledge, attitudes, and practices among adolescents in France: Secondary results from the PrevHPV trial., Vaccine 2025 Jun; 61(): 127344.

Hoefer A, Seth-Smith H, Palma F, Schindler S, Freschi L, Dangel A, Berger A, D'Aeth J, Cordery R, Delgado-Rodriguez E, Gruner E, Flury D, Hinic V, Kofler J, Lienhard R, Mariman R, Nolte O, Schibli A, Toubiana J, Traugott M, Jacquinet S, Indra A, Fry NK, Palm D, Sing A, Brisse S, Egli A, Corynebacterium diphtheriae Outbreak in Migrant Populations in Europe., N Engl J Med 2025 Jun; (): .

Ravneet Kaur Sidhu, Guillem Mas Fiol, Pierre Lê-Bury, Christian E Demeure, Emelyne Bougit, Rémi Beau, Charlotte Balière, Aurelia Kwasiborski, Valérie Caro, Jennifer Klunk, Daniel J Salkeld, Ann Carmichael, Nükhet Varlık, Debi Poinar, David J D Earn, Benjamin M Bolker, Jonathan Dushoff, G Brian Golding, Nicolas Rascovan, Olivier Dussurget, Edward C Holmes, Javier Pizarro-Cerdá, Hendrik N Poinar, Attenuation of virulence in Yersinia pestis across three plague pandemics, Science, 2025, 388 (6750), pp.eadt3880. ⟨10.1126/science.adt3880⟩.

Nora Zidane, Carla Rodrigues, Valerie Bouchez, Martin Rethoret-Pasty, Virginie Passet, Sylvain Brisse, Chiara Crestani, Accurate genotyping of three major respiratory bacterial pathogens with ONT R10.4.1 long-read sequencing, Genome Research, In press, pp.gr.279829.124. ⟨10.1101/gr.279829.124⟩.

Djamel Tahir, Virginie Geolier, Hugo Bruant, Anne Le Fleche-Mateos, Adeline Mallet, Marie Varloud, Céline Civat, Yves Girerd-Chambaz, Sandrine Montano, Corinne Pion, Elisabeth Ferquel, Vincent Pavot, Valérie Choumet, A Lyme disease mRNA vaccine targeting Borrelia burgdorferi OspA induces strong immune responses and prevents transmission in mice, Molecular Therapy - Nucleic Acids, 2025, 36 (2), pp.102514. ⟨10.1016/j.omtn.2025.102514⟩.

Garona J, Berard A, Tatard C, Kwasiborski A, Gauthier P, Ag Atteynine S, Hourdel V, Eusebe A, Diagne C, Caro V, Brouat C, Charbonnel N, Sauvage V, Granjon L, Castel G, Detection of two zoonotic pathogens, Seoul orthohantavirus and pathogenic Leptospira, in rats of Bamako, Mali (2021-2023)., One Health 2025 Jun; 20(): 101085.

Chiara Crestani, Virginie Passet, Martin Rethoret-Pasty, Nora Zidane, Sylvie Brémont, Edgar Badell, Alexis Criscuolo, Sylvain Brisse, Microevolution and genomic epidemiology of the diphtheria-causing zoonotic pathogen Corynebacterium ulcerans, Nature Communications, 2025, 16 (1), pp.4843. ⟨10.1038/s41467-025-60065-0⟩.

Hetland MAK, Winkler MA, Kaspersen H, Håkonsholm F, Bakksjø R-J, Bernhoff E, Delgado-Blas JF, Brisse S, Correia A, Fostervold A, Lam MMC, Lunestad B-T, Marathe NP, Raffelsberger N, Samuelsen Ø, Sunde M, Sundsfjord A, Urdahl AM, Wick RR, Holt KE, Löhr IH, Complete genomes of 568 diverse Klebsiella pneumoniae species complex isolates from humans, animals, and marine sources in Norway from 2001 to 2020., Microbiol Resour Announc 2025 May; (): e0093124.

Tamietti C, Stephen T, Rouvinski A, Tenebray B, Leparc-Goffard I, de Laval F, Fernandes-Pellerin S, Manuguerra JC, Rey F, Hasan M, Badaut C, Flamand M, Matheus S, Briolant S, Prolonged Zika Virus NS1 Protein Circulation in Patient Sera Impacts Clinical Outcome Before the Rise of a Specific IgM Response., J Med Virol 2025 May; 97(5): e70368.

Ndow G, Bangura R, Vo-Quang E, Touray F, Jatta A, Barry J, Mahmoud I, Bah S, Nyassi FB, Ceesay A, Bola-Lawal Q, Touray AB, Drammeh S, Cham H, Bojang L, Cloherty G, Lo G, Bittaye M, Badjie S, Toure-Kane C, D'Alessandro U, Shimakawa Y, Lemoine M, Residual risk of hepatitis B virus (HBV) mother-to-child transmission and gaps in HBV care cascades among pregnant women in The Gambia: the INFANT-B study., J Infect Dis 2025 Apr; (): .

Hetland MAK, Winkler MA, Kaspersen HP, Håkonsholm F, Bakksjø RJ, Bernhoff E, Delgado-Blas JF, Brisse S, Correia A, Fostervold A, Lam MMC, Lunestad BT, Marathe NP, Raffelsberger N, Samuelsen Ø, Sunde M, Sundsfjord A, Urdahl AM, Wick RR, Löhr IH, Holt KE, A genome-wide One Health study of Klebsiella pneumoniae in Norway reveals overlapping populations but few recent transmission events across reservoirs., Genome Med 2025 Apr; 17(1): 42.

Lam MMC, Salisbury SM, Treat LP, Wick RR, Judd LM, Wyres KL, Brisse S, Walker KA, Miller VL, Holt KE, Genomic and functional analysis of rmp locus variants in Klebsiella pneumoniae., Genome Med 2025 Apr; 17(1): 36.

Fu MX, Lambert G, Cook A, Ndow G, Haddadin Y, Shimakawa Y, Hallett TB, Harvala H, Sicuri E, Lemoine M, Nayagam S, Quality of life in patients with HBV infection: A systematic review and meta-analysis., JHEP Rep 2025 Apr; 7(4): 101312.

Michaël Falguières, Eva Hong, Mélanie Denizon, Aude Terrade, Muhamed-Kheir Eddine Taha, Ala-Eddine Deghmane, Fluctuations in serogroup B meningococcal vaccine antigens prior to routine MenB vaccination in France, Communications Medicine, 2025, 5 (1), pp.87. ⟨10.1038/s43856-025-00800-2⟩.

Vincent JP, Ségéral O, Kania D, Borand L, Adoukara JP, Pivert A, Koné A, Tiendrebeogo ASE, Tall H, Schaeffer L, Vray M, Sanou AM, Njouom R, Cloherty G, Hashimoto N, Miura T, Sugiura W, Sovann S, Yang JS, Delvallez G, Lunel-Fabiani F, Tanaka Y, Shimakawa Y, Hepatitis B core-related antigen rapid diagnostic test for point-of-care identification of women at high risk of hepatitis B vertical transmission: a multicountry diagnostic accuracy study., Lancet Gastroenterol Hepatol 2025 Mar; (): .

Riches N, Henrion MYR, MacPherson P, Hahn C, Kachala R, Mitchell T, Murray D, Mzumara W, Nkoka O, Price AJ, Riches J, Seery A, Thom N, Loarec A, Lemoine M, Ndow G, Shimakawa Y, Thompson P, Morgan C, Desai S, Easterbrook P, Stockdale AJ, Vertical transmission of hepatitis B virus in the WHO African region: a systematic review and meta-analysis., Lancet Glob Health 2025 Mar; 13(3): e447-e458.

Downs LO, Okanda D, Chirro O, Zaharani M, Safari B, Aliyan N, Andersson MI, Tanaka Y, Etyang AO, Shimakawa Y, Githinji G, Matthews PC, Hepatitis B Core-Related Antigen Point-of-Care Tests as a Risk Stratification Tool for Treatment Eligibility: Experience From Kenya., Open Forum Infect Dis 2025 Mar; 12(3): ofaf125.

Noel G, Harimanana A, Borand L, Campana F, Leng C, Botr C, Rafetrarivony L, Rajabizadeh M, Kerleguer A, Dim B, Randriamoramanana AM, Ait-Ahmed M, Guiso N, Collard JM, Taieb F, High circulation of pertussis in infants and close contacts in Antananarivo, the capital of Madagascar in Africa, and Cambodia in Asia., BMC Infect Dis 2025 Feb; 25(1): 287.

Ndzomo P, Deghmane AE, Tchatchouang S, Ngome R, Terrade A, Denizon M, Falguieres M, Doucoure O, Crucitti T, Boyomo O, Marks M, Eyangoh S, Taha MK, Genetic characterization of Haemophilus ducreyi from non-genital skin lesions in Cameroon., J Infect 2025 Feb; 90(3): 106448.

Monchausse T, Launay T, Rossignol L, Ait El Belghiti F, Brisse S, Guiso N, Merdrignac L, Rodrigues C, Parent du Châtelet I, Renard A, Toubiana J, Hanslik T, Blanchon T, Steichen O, Debin M, Clinical characteristics of cases during the 2024 pertussis epidemic in France, January 2024 to December 2024., Vaccine 2025 Feb; 51(): 126862.

Cortier T, Gilboa M, Layan M, Joseph G, Meltzer L, Amit S, Rubin C, Lustig Y, Alroy-Preis S, Kreiss Y, Cauchemez S, Regev-Yochay G, Factors associated with the transmission of the delta SARS-CoV-2 variant in households: the Israeli COVID-19 Family Study (ICoFS)., J Infect Dis 2025 Feb; (): .

Lowe CF, Ritchie G, Crestani C, Imperial M, Matic N, Payne M, Stefanovic A, Whellams D, Brisse S, Romney MG, Diphtheria Toxin-Producing Corynebacterium ramonii in Inner-City Population, Vancouver, British Columbia, Canada, 2019-2023., Emerg Infect Dis 2025 Feb; 31(2): 323-327.

Chaveron LA, Sicsic J, Olivier C, Pellissier G, Bouvet E, Mueller JE, Communicating on Vaccine Benefit-Risk Ratios: A Discrete-Choice Experiment among Health Care Professionals and the General Population in France., Med Decis Making 2025 Feb; 45(2): 177-191.

Randremanana RV, Tejiokem M, Rakotosamimanana N, Donfack VD, Mbouchong VB, Randrianarisoa M, Harimanana A, Taguebue JV, Ndiang ST, Itchy V, Robinson A, Ravelomanana L, Rakotomahefa M, Ranoharison D, Soumahoro MK, Gicquel B, N'Guessan R, Eyangoh S, Rasolofo V, A multicountry evaluation of the Xpert MTB/RIF assay for the diagnosis of intrathoracic tuberculosis in children using alternative specimens (nasopharyngeal aspirate and stool): A prospective cohort study conducted in Madagascar, Ivory Coast and Cameroon (TB KIDS project)., Int J Infect Dis 2025 Feb; 151(): 107366.

Rindra Vatosoa Randremanana, Mathurin Tejiokem, Niaina Rakotosamimanana, Valérie Donkeng Donfack, Verlaine Bolyse Mbouchong, Mirella Randrianarisoa, Aina Harimanana, Jean Voisin Taguebue, Suzie Tetang Ndiang, Valère Itchy, Annick Robinson, Lovaniaina Ravelomanana, Mbola Rakotomahefa, Dina Ranoharison, Man-Koumba Soumahoro, Brigitte Gicquel, Raymond N'Guessan, Sara Eyangoh, Voahangy Rasolofo, Emery Flavien Akpafi, Marius Irie Bi Irie, Anabelle Bai-Orsot, Jaudel Francis Yuya Septoh, Serge Abogo, Mamy Serge Raherison, Andrianantenaina Rakotoson, Vaomalala Raharimanga, Patrice Piola, Paulo Ranaivomanana, Jean-Marc Collard, Gabrielle Prisca Emmylou Andrianah, Turibio Razafindranaivo, Reziky Tiandraza Mangahasimbola, Kathleen Victoir, A multicountry evaluation of the Xpert MTB/RIF assay for the diagnosis of intrathoracic tuberculosis in children using alternative specimens (nasopharyngeal aspirate and stool): A prospective cohort study conducted in Madagascar, Ivory Coast and Cameroon (TB KIDS project), International Journal of Infectious Diseases, 2025, 151 (3), pp.107366. ⟨10.1016/j.ijid.2024.107366⟩.

Takayama Y, Shimakawa Y, Aizawa Y, Butcher C, Chibana N, Collins M, Kamegai K, Kim TG, Koyama S, Matsuyama R, Matthews MM, Mori T, Nagamoto T, Narita M, Omori R, Shibata N, Shibata S, Shiiki S, Takakura S, Toyozato N, Tsuchiya H, Wolf M, Yamamoto T, Yokoyama S, Yonaha S, Mizumoto K, SARS-CoV-2 IgG Seroprevalence in the Okinawa Main Island and Remote Islands in Okinawa, Japan, 2020-2021., Jpn J Infect Dis 2025 Jan; 78(1): 8-18.

Lièvre G, Sicsic J, Galmiche S, Charmet T, Fontanet A, Mueller J, Are psychological attitudes towards vaccination an expression of personality? A cross-sectional study on COVID-19 vaccination in France., BMC Public Health 2025 Jan; 25(1): 209.

Mougari S, Favède V, Predella C, Reynard O, Durand S, Mazelier M, Pizzioli E, Decimo D, Bovier FT, Lapsley LM, Castagna C, Lieberman NAP, Noel G, Mathieu C, Malissen B, Briese T, Greninger AL, Alabi CA, Dorrello NV, Marot S, Marcelin AG, Zarubica A, Moscona A, Porotto M, Horvat B, Intranasally administrated fusion-inhibitory lipopeptides block SARS-CoV-2 infection in mice and enable long-term protective immunity., Commun Biol 2025 Jan; 8(1): 57.

Dorleans FGE, Sicsic J, Henry V, Bonmarin I, Gbaguidi GN, Leon L, Raude J, Rosine J, Mueller JE, What are parents’ preferences for Human Papillomavirus vaccination promotion messages and communication? Application of a discrete choice experiment to a French Caribbean setting., BMC Public Health 2025 Jan; 25(1): 145.

Lefrancq N, Duret L, Bouchez V, Brisse S, Parkhill J, Salje H, Learning the fitness dynamics of pathogens from phylogenies., Nature 2025 Jan; (): .

Grandière Pérez L, Brisse S, Diphtheria antitoxin treatment: from pioneer to neglected., Mem Inst Oswaldo Cruz 2025 ; 120(): e240214.

Khazaz A, El Otmani F, Benzaarate I, El Hamouchi A, Bourjilat F, Brisse S, Nayme K, First detection of the high-risk Klebsiella pneumoniae ST147 clone producing NDM-14 in a community setting in Morocco: A new public health concern., J Glob Antimicrob Resist 2025 Jan; 40(): 96-97.

Hochedez P, Jidar K, Taieb F, Itani O, Benabdelmoumen G, Parize P, Bourhy H, Consigny PH, Poujol P, Rabies exposure in international travellers: Experience from a single travel clinic in Paris, France, 2018-2022., Travel Med Infect Dis 2025 ; 64(): 102821.

Njouom R, Ndiaye A, Modiyinji AF, Lissock F, Vincent JP, Baba M, Yamamoto N, Kaneko A, Aoyagi K, Hashimoto N, Nagai M, Ichikawa M, Miura T, Sugiura W, Tanaka Y, Shimakawa Y, Rapid test for hepatitis B core-related antigen to identify people living with hepatitis B having high viral load in Cameroon., Virology 2025 Jan; 602(): 110316.

Beeker L, Obadia T, Bloch E, Garcia L, Le Fol M, Charmet T, Arowas L, Artus R, Cheny O, Cheval D, Dahoumane Y, Delhaye M, Ergen D, Essaidani M, Fanaud C, Fernandes Pellerin S, Jolly N, Laude H, Roux E, Samson M, Sangari L, Ungeheuer MN, Vacant S, Zayoud A, Donnadieu F, Pelleau S, Galmiche S, Fontanet A, White M, Correlates of Protection Against Symptomatic COVID-19: The CORSER 5 Case-Control Study., Open Forum Infect Dis 2025 Jan; 12(1): ofaf006.

Correia T, Pereira ADC, Barros H, Davidovitch N, Leighton L, McCallum AK, Meireles P, Mueller JE, Otok R, Odone A, Petrakova A, Prymula R, Ricciardi W, Scintee SG, Signorelli C, Filling the Gap to Address Vaccine Hesitancy in Europe., Public Health Rev 2025 ; 46(): 1608208.

Rivera AF, Dussault JM, Oudin Doglioni D, Chyderiotis S, Sicsic J, Barret AS, Raude J, Gauchet A, Gagneux-Brunon A, Bruel S, Michel M, Le Duc-Banaszuk AS, Thilly N, Mueller JE, Sociodemographic determinants of HPV vaccine awareness, uptake, and intention among parents of adolescents in France 2021-22., Hum Vaccin Immunother 2024 Dec; 20(1): 2381300.

Biedrzycka M, Urbanowicz P, Brisse S, Palma F, Żabicka D, Gniadkowski M, Izdebski R, Multiple regional outbreaks caused by global and local VIM-producing Klebsiella pneumoniae clones in Poland, 2006-2019., Eur J Clin Microbiol Infect Dis 2024 Dec; (): .

Rouard C, Collet L, Njamkepo E, Jenkins C, Sacheli R, Benoit-Cattin T, Figoni J, Weill FX, Long-Distance Spread of a Highly Drug-Resistant Epidemic Cholera Strain., N Engl J Med 2024 Dec; 391(23): 2271-2273.

Hawkey J, Frézal L, Tran Dien A, Zhukova A, Brown D, Chattaway MA, Simon S, Izumiya H, Fields PI, De Lappe N, Kaftyreva L, Xu X, Isobe J, Clermont D, Njamkepo E, Akeda Y, Issenhuth-Jeanjean S, Makarova M, Wang Y, Hunt M, Jenkins BM, Ravel M, Guibert V, Serre E, Matveeva Z, Fabre L, Cormican M, Yue M, Zhu B, Morita M, Iqbal Z, Silva Nodari C, Pardos de la Gandara M, Weill FX, Genomic perspective on the bacillus causing paratyphoid B fever., Nat Commun 2024 Dec; 15(1): 10143.

Galmiche S, Coustaury C, Charniga K, Grant R, Cauchemez S, Fontanet A, Patterns and drivers of excess mortality during the COVID-19 pandemic in 13 Western European countries., BMC Glob Public Health 2024 Dec; 2(1): 78.

Gauthier Delvallez, Laure Diancourt, Julien Guglielmini, Anne-Laure Michon, Sylvain Brisse, B. Dupuy, Alexis Criscuolo, Comment on: Co-occurrence of the cephalosporinase cepA and carbapenemase cfiA genes in a Bacteroides fragilis Division II strain: an unexpected finding, Journal of Antimicrobial Chemotherapy, 6:dkae427. ⟨10.1093/jac/dkae427⟩.

Pérot P, Tondeur L, Moutailler S, Chrétien D, Corre-Catelin N, Vayssier-Taussat M, Eloit M, Chirouze C, Cazorla C, Broad range molecular detection methods identify only Borrelia spp. in erythema migrans biopsies and blood of tick-bitten patients., One Health 2024 Dec; 19(): 100886.

Chêne L, Morand JJ, Badell E, Toubiana J, Janvier F, Marthinet H, Suppini JP, Valois A, Texier G, Brisse S, Dutasta F, Cutaneous diphtheria from 2018 to 2022: an observational, retrospective study of epidemiological, microbiological, clinical, and therapeutic characteristics in metropolitan France., Emerg Microbes Infect 2024 Dec; 13(1): 2408324.

Li R, Tendu A, Kane Y, Omondi V, Ying J, Mao L, Xu S, Xu R, Chen X, Chen Y, Descorps-Declère S, Bienes KM, Fassatoui M, Hughes AC, Berthet N, Wong G, Differential prevalence and risk factors for infection with coronaviruses in bats collected from Yunnan Province, China., One Health 2024 Dec; 19(): 100923.

Ndow G, Shimakawa Y, Leith D, Bah S, Bangura R, Mahmoud I, Bojang L, Ceesay A, Drammeh S, Bola-Lawal Q, Lambert G, Hardy P, Ingiliz P, Haddadin Y, Vo-Quang E, Chevaliez S, Cloherty G, Bittaye SO, Lo G, Toure-Kane C, Mendy M, Njie R, Chemin I, D'Alessandro U, Thursz M, Lemoine M, Clinical outcomes of untreated adults living with chronic hepatitis B in The Gambia: an analysis of data from the prospective PROLIFICA cohort study., Lancet Gastroenterol Hepatol 2024 Dec; 9(12): 1133-1146.

Oudin Doglioni D, Gauchet A, Gagneux-Brunon A, Bruel S, Banaszuk AS, Thilly N, Sicsic J, Raude J, Mueller JE, Shared human papillomavirus vaccine readiness within families: A psychometric analysis of parent-adolescent dyads in France., Health Psychol 2024 Dec; 43(12): 893-903.

Chong CE, Pham TM, Carey ME, Wee BA, Taouk ML, Favieres JF, Moore CE, Dyson ZA, Lim C, Brown CL, Williamson D, Opatowski L, Outterson K, Mukiri KM, Sherry NL, Essack SY, Brisse S, Grad YH, Baker KS, Conference report of the 2024 Antimicrobial Resistance Meeting., NPJ Antimicrob Resist 2024 Nov; 2(1): 43.

Gautier S, Hammarlin MM, Paulik E, Montagni I, Mueller JE, Vaux S, Luyt D, Hausman BL, Bosman A, Dinh A, Josseran L, Bennet L, Delarocque-Astagneau E, New pedagogical tools for vaccine education: preparing future healthcare workers for the next pandemic., BMC Med Educ 2024 Nov; 24(1): 1314.

Hourdel V, Balière C, Vanhomwegen J, Brisebarre A, Grassin Q, Manuguerra J-C, Kallel H, Demar M, Dacheux L, Caro V, Complete genome sequence of a vampire bat-related rabies virus obtained by metagenomics from a patient with encephalitis of unknown etiology, French Guiana., Microbiol Resour Announc 2024 Nov; 13(11): e0051424.

Ceesay A, Drammeh S, Ndow G, Jallow AOA, Nyang H, Bittaye B, Mendy FS, Secka O, D'Alessandro U, Shimakawa Y, Vo-Quang E, Testoni B, Thursz M, Lemoine M, Chemin I, Real-Life Diagnostic Accuracy and Clinical Utility of Hepatitis B Virus (HBV) Nucleic Acid Testing Using the GeneXpert Point-of-Care Test System from Fresh Plasma and Dry Blood Spot Samples in The Gambia., Microorganisms 2024 Nov; 12(11): .

Macaux L, Rasolofo V, Eyangoh S, N'Guessan KR, Tejiokem MC, Rakotosamimanana N, Soumahoro MK, Cauchemez S, Randremanana RV, Accuracy of Xpert and alternative sampling methods to diagnose childhood pulmonary tuberculosis, a prospective cohort study., Clin Microbiol Infect 2024 Nov; (): .

Takayama Y, Shimakawa Y, Matsuyama R, Chowell G, Omori R, Nagamoto T, Yamamoto T, Mizumoto K, SARS-CoV-2 Infection in School Settings, Okinawa Prefecture, Japan, 2021-2022., Emerg Infect Dis 2024 Nov; 30(11): 2343-2351.

Araujo-Chaveron L, Olivier C, Pellissier G, Bouvet E, Mueller JE, Analyzing the 7C psychological antecedents of vaccine acceptance throughout the COVID-19 pandemic among healthcare sector workers in France: A repeated cross-sectional study (CappVac-Cov)., Vaccine 2024 Oct; 42(24): 126103.

Ligowska-Marzęta M, Barbier E, Rodrigues C, Piveteau P, Schrøder Hansen D, Hartmann A, Møller Nielsen E, Brisse S, Triplex real-time PCR ZKIR-T assay for simultaneous detection of the Klebsiella pneumoniae species complex and identification of K. pneumoniae sensu stricto., Microbiol Spectr 2024 Oct; (): e0033624.

Gu Q, Draheim M, Planchais C, He Z, Mu F, Gong S, Shen C, Zhu H, Zhivaki D, Shahin K, Collard JM, Su M, Zhang X, Mouquet H, Lo-Man R, Intestinal newborn regulatory B cell antibodies modulate microbiota communities., Cell Host Microbe 2024 Oct; 32(10): 1787-1804.e9.

Breban R, The Peculiar Emergence of Mpox (Monkeypox): Directions for the Search for the Natural Reservoir and Vaccination Strategies., Vaccines (Basel) 2024 Oct; 12(10): .

Brault A, Pontais I, Enouf V, Debeuret C, Bloch E, Paireau J, Rameix-Welti MA, White M, Baudemont G, Lina B, Parent du Châtelet I, Casalegno JS, Vaux S, Cauchemez S, Effect of nirsevimab on hospitalisations for respiratory syncytial virus bronchiolitis in France, 2023-24: a modelling study., Lancet Child Adolesc Health 2024 Oct; 8(10): 721-729.

Tsang KK, Lam MMC, Wick RR, Wyres KL, Bachman M, Baker S, Barry K, Brisse S, Campino S, Chiaverini A, Cirillo DM, Clark T, Corander J, Corbella M, Cornacchia A, Cuénod A, D'Alterio N, Di Marco F, Donado-Godoy P, Egli A, Farzana R, Feil EJ, Fostervold A, Gorrie CL, Hassan B, Hetland MAK, Hoa LNM, Hoi LT, Howden B, Ikhimiukor OO, Jenney AWJ, Kaspersen H, Khokhar F, Leangapichart T, Ligowska-Marzęta M, Löhr IH, Long SW, Mathers AJ, McArthur AG, Nagaraj G, Oaikhena AO, Okeke IN, Perdigão J, Parikh H, Pham MH, Pomilio F, Raffelsberger N, Rakotondrasoa A, Kumar KLR, Roberts LW, Rodrigues C, Samuelsen Ø, Sands K, Sassera D, Seth-Smith H, Shamanna V, Sherry NL, Sia S, Spadar A, Stoesser N, Sunde M, Sundsfjord A, Thach PN, Thomson NR, Thorpe HA, Torok ME, Trang VD, Trung NV, Vornhagen J, Walsh T, Warne B, Wilson H, Wright GD, Holt KE, KlebNET-Gsp Amr Genotype-Phenotype Group, Diversity, functional classification and genotyping of SHV β-lactamases in Klebsiella pneumoniae., Microb Genom 2024 Oct; 10(10): .

Tsang KK, Lam MMC, Wick RR, Wyres KL, Bachman M, Baker S, Barry K, Brisse S, Campino S, Chiaverini A, Cirillo DM, Clark T, Corander J, Corbella M, Cornacchia A, Cuénod A, D'Alterio N, Di Marco F, Donado-Godoy P, Egli A, Farzana R, Feil EJ, Fostervold A, Gorrie CL, Hassan B, Hetland MAK, Hoa LNM, Hoi LT, Howden B, Ikhimiukor OO, Jenney AWJ, Kaspersen H, Khokhar F, Leangapichart T, Ligowska-Marzęta M, Löhr IH, Long SW, Mathers AJ, McArthur AG, Nagaraj G, Oaikhena AO, Okeke IN, Perdigão J, Parikh H, Pham MH, Pomilio F, Raffelsberger N, Rakotondrasoa A, Kumar KLR, Roberts LW, Rodrigues C, Samuelsen Ø, Sands K, Sassera D, Seth-Smith H, Shamanna V, Sherry NL, Sia S, Spadar A, Stoesser N, Sunde M, Sundsfjord A, Thach PN, Thomson NR, Thorpe HA, Torok ME, Trang VD, Trung NV, Vornhagen J, Walsh T, Warne B, Wilson H, Wright GD, Holt KE, KlebNET-Gsp Amr Genotype-Phenotype Group, Diversity, functional classification and genotyping of SHV β-lactamases in Klebsiella pneumoniae., Microb Genom 2024 Oct; 10(10): .

Sabaté-Elabbadi A, Brolon L, Brun-Buisson C, Guillemot D, Fartoukh M, Watier L, Trends in hospitalisations for lower respiratory infections after the COVID-19 pandemic in France., J Infect 2024 Sep; (): 106287.

Leroux P, Matczak S, Bouchez V, Volant S, Ouziel A, Launay E, Faye A, Rabier V, Sarlangue J, Jeziorski E, Maakaroun-Vermesse Z, Madhi F, Pinquier D, Lorrot M, Pouletty M, Cantais A, Javouhey E, Aït Belghiti F, Guillot S, Rodrigues C, Brisse S, Cohen JF, Toubiana J, Association between pertactin-producing Bordetella pertussis and fulminant pertussis in infants: a multicenter study in France, 2008-2019., Clin Microbiol Infect 2024 Sep; (): .

Rafei R, Osman M, Kassem II, Dabboussi F, Weill FX, Hamze M, Spotlight on the epidemiology and antimicrobial susceptibility profiles of Vibrio species in the MENA region, 2000-2023., Future Microbiol 2024 Sep; (): 1-21.

Galmiche S, Charmet T, Rakover A, Chény O, Omar F, David C, Mailles A, Carrat F, Fontanet A, Risk of SARS-CoV-2 infection in professional settings, shops, shared transport, and leisure activities in France, 2020-2022., BMC Public Health 2024 Sep; 24(1): 2411.

Rouard C, Greig DR, Tauhid T, Dupke S, Njamkepo E, Amato E, van der Putten B, Naseer U, Blaschitz M, Mandilara GD, Cohen Stuart J, Indra A, Noël H, Sideroglou T, Heger F, van den Beld M, Wester AL, Quilici ML, Scholz HC, Fröding I, Jenkins C, Weill FX, Genomic analysis of Vibrio cholerae O1 isolates from cholera cases, Europe, 2022., Euro Surveill 2024 Sep; 29(36): .

Rouard C, Njamkepo E, Quilici ML, Nguyen S, Knight-Connoni V, Šafránková R, Weill FX, Vibrio cholerae serogroup O5 was responsible for the outbreak of gastroenteritis in Czechoslovakia in 1965., Microb Genom 2024 Sep; 10(9): .

Inizan C, Courtot A, Sturmach C, Griffon AF, Biron A, Bruel T, Enouf V, Demaneuf T, Munier S, Schwartz O, Gourinat AC, Médevielle G, Jouan M, van der Werf S, Madec Y, Albert-Dunais V, Dupont-Rouzeyrol M, Levels and functionality of Pacific Islanders’ hybrid humoral immune response to BNT162b2 vaccination and delta/omicron infection: A cohort study in New Caledonia., PLoS Med 2024 Sep; 21(9): e1004397.

Perrey C, Mailles A, Septfons A, Charmet T, Cheny O, Von Platen C, Huet P, Lévy-Bruhl D, Galmiche S, Fontanet A, Jauffret-Roustide M, Contributions of the qualitative Qualicor study embedded in a cohort study on the circumstances of SARS-CoV 2 infection in France., Infect Dis Now 2024 Sep; 54(6): 104943.

Chyderiotis S, Sicsic J, Gagneux-Brunon A, Raude J, Barret AS, Bruel S, Gauchet A, Le Duc Banaszuk AS, Michel M, Giraudeau B, Thilly N, Mueller JE, Optimizing Communication on HPV Vaccination to Parents of 11- to 14-Year-Old Adolescents in France: A Discrete Choice Experiment., Patient 2024 Sep; 17(5): 575-588.

Abou Fayad A, Rafei R, Njamkepo E, Ezzeddine J, Hussein H, Sinno S, Gerges JR, Barada S, Sleiman A, Assi M, Baakliny M, Hamedeh L, Mahfouz R, Dabboussi F, Feghali R, Mohsen Z, Rady A, Ghosn N, Abiad F, Abubakar A, Barakat A, Wauquier N, Quilici ML, Hamze M, Weill FX, Matar GM, An unusual two-strain cholera outbreak in Lebanon, 2022-2023: a genomic epidemiology study., Nat Commun 2024 Aug; 15(1): 6963.

Jill-Léa Ramassamy, Ahidjo Ayouba, Guillaume Thaurignac, Chanceline Bilounga Ndongo, Patrick Nnuka, Edouard Betsem, Richard Njouom, Eitel Mpoudi Ngole, Jessica Vanhomwegen, Damien Hoinard, Patrick England, Alexandra Journeaux, Caroline Picard, Damien Thomas, Delphine Pannetier, Sylvain Baize, Eric Delaporte, Martine Peeters, Antoine Gessain, High seroreactivities to orthoebolaviruses in rural Cameroon: a case-control study on non-human primate bites and a cross-sectional survey in rural population, Journal of Infectious Diseases, 2024, pp.jiae399. ⟨10.1093/infdis/jiae399⟩.

Jauvain M, Carrer M, Palma F, Chapuzet C, Courat N, Heslan C, Pereyre S, Cazanave C, Brisse S, Bacteraemia associated with multiple septic localizations caused by Klebsiella pneumoniae sequence type ST660., Eur J Clin Microbiol Infect Dis 2024 Aug; 43(8): 1655-1659.

Gaillet M, Hennart M, Rose VS, Badell E, Michaud C, Blaizot R, Demar M, Carvalho L, Carod JF, Andrieu A, Djossou F, Toubiana J, Epelboin L, Brisse S, Retrospective Study of Infections with Corynebacterium diphtheriae Species Complex, French Guiana, 2016-2021., Emerg Infect Dis 2024 Aug; 30(8): 1545-1554.

Rodrigues C, Bouchez V, Soares A, Trombert-Paolantoni S, Aït El Belghiti F, Cohen JF, Armatys N, Landier A, Blanchot T, Hervo M, , Toubiana J, Brisse S, Resurgence of Bordetella pertussis, including one macrolide-resistant isolate, France, 2024., Euro Surveill 2024 Aug; 29(31): .

Quentin Leclerc, Audrey Duval, Didier Guillemot, Lulla Opatowski, Laura Temime, Using contact network dynamics to implement efficient interventions against pathogen spread in hospital settings: A modelling study, PLoS Medicine, 2024, 21 (7), pp.e1004433. ⟨10.1371/journal.pmed.1004433⟩.

Bouchez V, Toubiana J, Guillot S, Parapertussis Study Group , El Belghiti FA, Landier A, Armatys N, Trombert-Paolantoni S, Soares A, Rodrigues C, Brisse S, Transient reemergence of Bordetella parapertussis in France in 2022., J Med Microbiol 2024 Jul; 73(7): .

Gosset A, Drabo S, Carrieri P, Tiendrebeogo ASE, Vincent JP, Tanaka Y, Sombié R, Tall H, Kania D, Boyer S, Shimakawa Y, Costs of integrating hepatitis B screening and antiviral prophylaxis into routine antenatal care in Burkina Faso: Treat all versus targeted strategies., Int J Gynaecol Obstet 2024 Jul; 166(1): 44-61.

Minier N, Johannessen A, Sombié R, Lemoine M, Shimakawa Y, The HEPSANET score to assess treatment eligibility of chronic hepatitis B in Africa – Authors’ reply., Lancet Gastroenterol Hepatol 2024 Jul; 9(7): 589-590.

Lumley SF, Delphin M, Mokaya JF, Tan CCS, Martyn E, Anderson M, Li KC, Waddilove E, Sukali G, Downs LO, Said K, Okanda D, Campbell C, Harriss E, Shimakawa Y, Matthews PC, A systematic review and meta-analysis of the risk of hepatitis B virus (HBV) resistance in people treated with entecavir or tenofovir., J Clin Virol 2024 Jun; 174(): 105711.

Rahbé E, Glaser P, Opatowski L, Modeling the transmission of antibiotic-resistant Enterobacterales in the community: A systematic review., Epidemics 2024 Jun; 48(): 100783.

Layan M, Hens N, de Hoog MLA, Bruijning-Verhagen PCJL, Cowling BJ, Cauchemez S, Addressing current limitations of household transmission studies by collecting contact data., Am J Epidemiol 2024 Jun; (): .

Nunes MC, Thommes E, Fröhlich H, Flahault A, Arino J, Baguelin M, Biggerstaff M, Bizel-Bizellot G, Borchering R, Cacciapaglia G, Cauchemez S, Barbier-Chebbah A, Claussen C, Choirat C, Cojocaru M, Commaille-Chapus C, Hon C, Kong J, Lambert N, Lauer KB, Lehr T, Mahe C, Marechal V, Mebarki A, Moghadas S, Niehus R, Opatowski L, Parino F, Pruvost G, Schuppert A, Thiébaut R, Thomas-Bachli A, Viboud C, Wu J, Crépey P, Coudeville L, Redefining pandemic preparedness: Multidisciplinary insights from the CERP modelling workshop in infectious diseases, workshop report., Infect Dis Model 2024 Jun; 9(2): 501-518.

Luong Nguyen LB, Lemoine M, Ndow G, Nayagam S, Shimakawa Y, TREAT-B or Treat All: time for a broader vision on hepatitis B elimination – Author’s reply., Lancet Glob Health 2024 Jun; 12(6): e917.

Duval A, Leclerc QJ, Guillemot D, Temime L, Opatowski L, An algorithm to build synthetic temporal contact networks based on close-proximity interactions data., PLoS Comput Biol 2024 Jun; 20(6): e1012227.

Ramírez RMG, Bohers C, Mousson L, Madec Y, Vazeille M, Piorkowski G, Moutailler S, Diaz FJ, Rúa-Uribe G, Villar LA, de Lamballerie X, Failloux AB, Increased threat of urban arboviral diseases from Aedes aegypti mosquitoes in Colombia., IJID Reg 2024 Jun; 11(): 100360.

De Greef J, Averbuch D, Tondeur L, Duréault A, Zuckerman T, Roussel X, Robin C, Xhaard A, Pagliuca S, Beguin Y, Botella-Garcia C, Khanna N, Le Bourgeois A, Van Praet J, Ho A, Kröger N, Ducastelle Leprêtre S, Roos-Weil D, Aljurf M, Blijlevens N, Blau IW, Carlson K, Collin M, Ganser A, Villate A, Lakner J, Martin S, Nagler A, Ram R, Torrent A, Stamouli M, Mikulska M, Gil L, Wendel L, Tridello G, Knelange N, de la Camara R, Lortholary O, Fontanet A, Styczynski J, Maertens J, Coussement J, Lebeaux D, Risk factors for Nocardia infection among allogeneic hematopoietic cell transplant recipients: A case-control study of the Infectious Diseases Working Party of the European Society for Blood and Marrow Transplantation., J Infect 2024 Jun; 88(6): 106162.

Chyderiotis S, Derhy S, Gaillot J, Cobigo A, Zanetti L, Piel C, Mueller JE, Providing parents with HPV vaccine information from a male perspective may render them more inclined to have their daughters vaccinated., Infect Dis Now 2024 Jun; 54(4): 104908.

Takayama Y, Xu YS, Shimakawa Y, Chowell G, Kozuka M, Omori R, Matsuyama R, Yamamoto T, Mizumoto K, Assessment of fever screening at airports in detecting domestic passengers infected with SARS-CoV-2, 2020-2022, Okinawa prefecture, Japan., BMC Infect Dis 2024 May; 24(1): 542.

Mitri C, Philippart F, Sacco E, Legriel S, Rousselet N, Dupuis G, Colsch B, Corvol H, Touqui L, Tabary O, Multicentric investigations of the role in the disease severity of accelerated phospholipid changes in COVID-19 patient airway., Microbes Infect 2024 May; (): 105354.

Chen Y, Xu Y, Wang L, Liang Y, Li N, Lourenço J, Yang Y, Lin Q, Wang L, Zhao H, Cazelles B, Song H, Liu Z, Wang Z, Brady OJ, Cauchemez S, Tian H, Indian Ocean temperature anomalies predict long-term global dengue trends., Science 2024 May; 384(6696): 639-646.

Henriot P, Buelow E, Petit F, Ploy MC, Dagot C, Opatowski L, Modeling the impact of urban and hospital eco-exposomes on antibiotic-resistance dynamics in wastewaters., Sci Total Environ 2024 May; 924(): 171643.

Besombes C, Mbrenga F, Gonofio E, Malaka C, Bationo CS, Gaudart J, Curaudeau M, Hassanin A, Gessain A, Duda R, Vernick TG, Fontanet A, Nakouné E, Landier J, Seasonal Patterns of Mpox Index Cases, Africa, 1970-2021., Emerg Infect Dis 2024 May; 30(5): 1017-1021.

Paul Henriot, Elena Buelow, Fabienne Petit, Marie-Cécile Ploy, Christophe Dagot, Lulla Opatowski, Modeling the impact of urban and hospital eco-exposomes on antibiotic-resistance dynamics in wastewaters, Science of the Total Environment, 2024, 924, pp.171643. ⟨10.1016/j.scitotenv.2024.171643⟩.

Smith DRM, Duval A, Grant R, Abbas M, Harbarth S, Opatowski L, Temime L, Predicting consequences of COVID-19 control measure de-escalation on nosocomial transmission and mortality: a modelling study in a French rehabilitation hospital., J Hosp Infect 2024 May; 147(): 47-55.

Thilly N, Michel M, Simon M, Bocquier A, Gagneux-Brunon A, Gauchet A, Gilberg S, Le Duc-Banaszuk AS, Bruel S, Mueller JE, Giraudeau B, Chevreul K, Effectiveness of a School- and Primary Care-Based HPV Vaccination Intervention: The PrevHPV Cluster Randomized Trial., JAMA Netw Open 2024 May; 7(5): e2411938.

El Ghalid M, Chiarelli A, Brisse S, Betsou F, Garcia-Hermoso D, Stability and Qualification of a Legacy Fungal Collection., Biopreserv Biobank 2024 Apr; (): .

Vialetto E, Miele S, Goren MG, Yu J, Yu Y, Collias D, Beamud B, Osbelt L, Lourenço M, Strowig T, Brisse S, Barquist L, Qimron U, Bikard D, Beisel CL, Systematic interrogation of CRISPR antimicrobials in Klebsiella pneumoniae reveals nuclease-, guide- and strain-dependent features influencing antimicrobial activity., Nucleic Acids Res 2024 Jun; 52(10): 6079-6091.

Gaëlle Lièvre, Jonathan Sicsic, Simon Galmiche, Tiffany Charmet, Arnaud Fontanet, Judith Mueller, Are the 7C psychological antecedents associated with COVID-19 vaccine behaviours beyond intentions? A cross-sectional study on at-least-one-dose and up-to-date vaccination status, and uptake speed among adults in France, Vaccine, 2024, S0264-410X (24), pp.00438-9. ⟨10.1016/j.vaccine.2024.04.024⟩.

Van Goethem T, Kerambrun H, Boue Y, Chamouine A, Brisse S, Toubiana J, Franco J, Intravenous Immunoglobulin in Diphtheritic Polyneuropathy., Pediatr Infect Dis J 2024 Apr; (): .

Juneau C, Fall E, Bros J, Le Duc-Banaszuk AS, Michel M, Bruel S, Marie Dit Asse L, Kalecinski J, Bonnay S, Mueller JE, Thilly N, Gagneux-Brunon A, Gauchet A, Do boys have the same intentions to get the HPV vaccine as girls? Knowledge, attitudes, and intentions in France., Vaccine 2024 Apr; 42(10): 2628-2636.

Minier N, Guingané AN, Okeke E, Sinkala E, Johannessen A, Andersson MI, Davwar P, Desalegn H, Duguru M, Fall F, Mboup S, Maponga T, Matthews PC, Ramírez Mena A, Ndow G, Orlien SMS, Riches N, Seydi M, Sonderup M, Spearman CW, Stockdale AJ, Taljaard J, Vinikoor M, Wandeler G, Lemoine M, Shimakawa Y, Sombié R, Development and evaluation of a simple treatment eligibility score (HEPSANET) to decentralise hepatitis B care in Africa: a cross-sectional study., Lancet Gastroenterol Hepatol 2024 Apr; 9(4): 323-332.

Perraud V, Vanderhoydonck B, Bouvier G, Dias de Melo G, Kilonda A, Koukni M, Jochmans D, Rogée S, Ben Khalifa Y, Kergoat L, Lannoy J, Van Buyten T, Izadi-Pruneyre N, Chaltin P, Neyts J, Marchand A, Larrous F, Bourhy H, Mechanism of action of phthalazinone derivatives against rabies virus., Antiviral Res 2024 Apr; 224(): 105838.

Pence BW, Gaynes BN, Udedi M, Kulisewa K, Zimba CC, Akiba CF, Dussault JM, Akello H, Malava JK, Crampin A, Zhang Y, Preisser JS, DeLong SM, Hosseinipour MC, Two implementation strategies to support the integration of depression screening and treatment into hypertension and diabetes care in Malawi (SHARP): parallel, cluster-randomised, controlled, implementation trial., Lancet Glob Health 2024 Apr; 12(4): e652-e661.

Yanguela J, Pence BW, Udedi M, Banda JC, Kulisewa K, Zimba CC, Malava JK, Akiba C, Dussault JM, Morrison AM, Mphonda S, Hosseinipour MC, Gaynes BN, Wheeler SB, Implementation strategies to build mental health-care capacity in Malawi: a health-economic evaluation., Lancet Glob Health 2024 Apr; 12(4): e662-e671.

Teiti I, Aubry M, Glaziou P, Mendiboure V, Teissier A, Paoaafaite T, Simon A, Chung K, Dian L, Olivier S, Pineau P, Fontanet A, Condat B, Madec Y, Lastère S, Cao-Lormeau VM, Towards elimination of chronic viral hepatitis in French Polynesia: results from a national population-based survey., Lancet Reg Health West Pac 2024 Apr; 45(): 101035.

Bruel S, Rakotomampionona Z, Gignon M, Agrinier N, Ndiaye NC, Lasset C, Giraudeau B, Michel M, Mueller JE, Gauchet A, Banaszuk AS, Thilly N, Gagneux-Brunon A, The intentions of French health university students to recommend and to receive the HPV vaccine are mainly influenced by vaccine knowledge, confidence in vaccines and personal HPV vaccination., Vaccine 2024 Mar; 42(8): 1934-1940.

Anja Berger, E Badell, Jenny Åhman, Erika Matuschek, Nora Zidane, Gunnar Kahlmeter, Andreas Sing, Sylvain Brisse, Corynebacterium diphtheriae and Corynebacterium ulcerans : development of EUCAST methods and generation of data on which to determine breakpoints, Journal of Antimicrobial Chemotherapy, 2024, pp.dkae056. ⟨10.1093/jac/dkae056⟩.

Aouadi W, Najburg V, Legendre R, Varet H, Kergoat L, Tangy F, Larrous F, Komarova AV, Bourhy H, Comparative analysis of rabies pathogenic and vaccine strains detection by RIG-I-like receptors., Microbes Infect 2024 ; 26(4): 105321.

Aleksandra Kovacevic, David Rm Smith, Eve Rahbé, Sophie Novelli, Paul Henriot, Emmanuelle Varon, Robert Cohen, Corinne Levy, Laura Temime, Lulla Opatowski, Exploring factors shaping antibiotic resistance patterns in Streptococcus pneumoniae during the 2020 COVID-19 pandemic., eLife, 2024, 13, pp.e85701. ⟨10.7554/eLife.85701⟩.

Shirreff G, Huynh BT, Duval A, Pereira LC, Annane D, Dinh A, Lambotte O, Bulifon S, Guichardon M, Beaune S, Toubiana J, Kermorvant-Duchemin E, Chéron G, Cordel H, Argaud L, Douplat M, Abraham P, Tazarourte K, Martin-Gaujard G, Vanhems P, Hilliquin D, Nguyen D, Chelius G, Fraboulet A, , Temime L, Opatowski L, Guillemot D, Assessing respiratory epidemic potential in French hospitals through collection of close contact data (April-June 2020)., Sci Rep 2024 Feb; 14(1): 3702.

Delfraissy JF, Horgan M, Mølbak K, Simón FS, Stadler T, van Dissel J, Van Gucht S, Ricciardi W, Wieler L, Vallance P, Scientific advisory councils in the COVID-19 response., Lancet 2024 Feb; 403(10426): 510-512.

Örmälä-Tiznado A-M, Allander L, Maatallah M, Kabir MH, Brisse S, Sandegren L, Patpatia S, Coorens M, Giske CG, Molecular characteristics, fitness, and virulence of high-risk and non-high-risk clones of carbapenemase-producing Klebsiella pneumoniae., Microbiol Spectr 2024 Feb; 12(2): e0403622.

Mendiboure V, Teiti I, Aubry M, Teissier A, Paoaafaite T, Vanhomwegen J, Manuguerra JC, Fontanet A, Cao-Lormeau VM, Madec Y, SARS-CoV-2 seroprevalence and associated factors of infection before and after the Delta wave in French Polynesia: a cross-sectional study., BMC Public Health 2024 Feb; 24(1): 382.

Moura A, Leclercq A, Vales G, Tessaud-Rita N, Bracq-Dieye H, Thouvenot P, Madec Y, Charlier C, Lecuit M, Phenotypic and genotypic antimicrobial resistance of Listeria monocytogenes: an observational study in France., Lancet Reg Health Eur 2024 Feb; 37(): 100800.

Cooper HB, Vezina B, Hawkey J, Passet V, López-Fernández S, Monk JM, Brisse S, Holt KE, Wyres KL, A validated pangenome-scale metabolic model for the Klebsiella pneumoniae species complex., Microb Genom 2024 Feb; 10(2): .

Rakover A, Galmiche S, Charmet T, Chény O, Omar F, David C, Martin S, Mailles A, Fontanet A, Source of SARS-CoV-2 infection: results from a series of 584,846 cases in France from October 2020 to August 2022., BMC Public Health 2024 Jan; 24(1): 325.

Yang JS, Sovann S, Shimakawa Y, Nhoueng S, Dim B, Vong C, Sann C, Guillebaud J, Vann D, Touch B, Chea H, Phirum WPC, Rosenthal E, Paul C, Khun L, Yay C, Laurent D, Chhun S, Borand L, Segeral O, Simplified Criteria to Assess Long-Term Antiviral Treatment Indication in Chronic HBV-Infected Pregnant Women in Cambodia., Viruses 2024 Jan; 16(2): .

Jalalizadeh F, Njamkepo E, Weill FX, Goodarzi F, Rahnamaye-Farzami M, Sabourian R, Bakhshi B, Genetic approach toward linkage of Iran 2012-2016 cholera outbreaks with 7th pandemic Vibrio cholerae., BMC Microbiol 2024 Jan; 24(1): 33.

Djamel Tahir, Virginie Geolier, Sophie Dupuis, Nouha Lekouch, Elisabeth Ferquel, Valérie Choumet, Marie Varloud, Comparative Evaluation of the Efficacy of Two Ectoparasiticides in Preventing the Acquisition of Borrelia burgdorferi by Ixodes scapularis and Ixodes ricinus: A Canine Ex Vivo Model, Microorganisms, 2024, 12 (1), pp.202. ⟨10.3390/microorganisms12010202⟩.

Emeline Perthame, Loïc Chartier, Jean-Claude George, Marie Varloud, Elisabeth Ferquel, Valérie Choumet, Case presentation and management of Lyme disease patients: a 9-year retrospective analysis in France, Frontiers in Medicine, 2024, 10, pp.1296486. ⟨10.3389/fmed.2023.1296486⟩.

Kwasiborski A, Hourdel V, Balière C, Hoinard D, Grassin Q, Feher M, De La Porte Des Vaux C, Cresta M, Vanhomwegen J, Manuguerra J-C, Batéjat C, Caro V, Direct metagenomic and amplicon-based Nanopore sequencing of French human monkeypox from clinical specimen., Microbiol Resour Announc 2024 Jan; 13(1): e0081123.

Sophie Novelli, Lulla Opatowski, Carmelite Manto, Delphine Rahib, Xavier de Lamballerie, Josiane Warszawski, Laurence Meyer, On Behalf of The Epicov Study Group, Risk Factors for Community and Intrahousehold Transmission of SARS-CoV-2: Modeling in a Nationwide French Population-Based Cohort Study, the EpiCoV Study, American Journal of Epidemiology, 2024, 193 (1), pp.134-148. ⟨10.1093/aje/kwad174⟩.

Tron A, Schlegel V, Pinot J, Bruel S, Ecollan M, Bel JL, Rossignol L, Gauchet A, Gagneux-Brunon A, Mueller J, Banaszuk AS, Thilly N, Gilberg S, Partouche H, Barriers and facilitators to the HPV vaccine: a multicenter qualitative study of French general practitioners., Arch Public Health 2024 Jan; 82(1): 2.

De Bene AF, Russini V, Corradini C, Vita S, Pecchi S, De Marchis ML, Terracciano G, Focardi C, Montemaggiori A, Zuffi MAL, Weill FX, Bossù T, An extremely rare serovar of Salmonella enterica (Yopougon) discovered in a Western Whip Snake (Hierophis viridiflavus) from Montecristo Island, Italy: case report and review., Arch Microbiol 2024 Jan; 206(1): 49.

Nguyen LBL, Lemoine M, Ndow G, Ward ZJ, Hallet TB, D'Alessandro U, Thursz M, Nayagam S, Shimakawa Y, Treat All versus targeted strategies to select HBV-infected people for antiviral therapy in The Gambia, west Africa: a cost-effectiveness analysis., Lancet Glob Health 2024 Jan; 12(1): e66-e78.

Landrum KR, Gaynes BN, Akello H, Malava JK, Dussault JM, Hosseinipour MC, Udedi M, Masiye J, Zimba CC, Pence BW, The longitudinal association of stressful life events with depression remission among SHARP trial participants with depression and hypertension or diabetes in Malawi., PLoS One 2024 ; 19(2): e0298546.

Hugues Delamare, Julian Euma Ishii-Rousseau, Adya Rao, Mélanie Cresta, Jeanne Perpétue Vincent, Olivier Ségéral, Shevanthi Nayagam, Yusuke Shimakawa, Proportion of HBV-infected pregnant women eligible for antiviral prophylaxis to prevent vertical transmission: a systematic review and meta-analysis, JHEP Reports, 2024, 6 (8), pp.101064. ⟨10.1016/j.jhepr.2024.101064⟩.

Mutschler E, Roloff T, Neves A, Vangstein Aamot H, Rodriguez-Sanchez B, Ramirez M, Rossen J, Couto N, Novais Â, Howden BP, Brisse S, Reuter S, Nolte O, Egli A, Seth-Smith HMB, Towards unified reporting of genome sequencing results in clinical microbiology., PeerJ 2024 ; 12(): e17673.

Jean K, Tawheed A, Luong Nguyen LB, Heikal T, Eldaly U, Gaber Elhadidy N, Elghaieb A, Aboudonia A, Tondeur L, Dublineau A, Fontanet A, El-Kassas M, A Comparison of Presentation, Treatment, and Survival After Hepatocellular Carcinoma of Viral and Non-Viral Etiology in Damietta, Egypt, 2007-2019., J Hepatocell Carcinoma 2024 ; 11(): 997-1004.

Cui S, Xia T, Zhao J, Ren X, Wu T, Kameni M, Guo X, He L, Guo J, Duperray-Susini A, Levillayer F, Collard JM, Zhong J, Pan L, Tangy F, Vidalain PO, Zhou D, Jiu Y, Faure M, Wei Y, NDP52 mediates an antiviral response to hepatitis B virus infection through Rab9-dependent lysosomal degradation pathway., Nat Commun 2023 Dec; 14(1): 8440.

Belkacem N, Deghmane AE, Taha MK, Biofilm formation by non-typeable Haemophilus influenzae confers resistance to complement-mediated clearance., J Infect Dis 2023 Dec; (): .

Kane Y, Tendu A, Li R, Chen Y, Mastriani E, Lan J, Hughes AC, Berthet N, Wong G, Viral diversity in wild and urban rodents of Yunnan Province, China., Emerg Microbes Infect 2023 Dec; (): 2290842.

Taha S, Hong E, Denizon M, Falguières M, Terrade A, Deghmane AE, Taha MK, The rapid rebound of invasive meningococcal disease in France at the end of 2022., J Infect Public Health 2023 Dec; 16(12): 1954-1960.

Akiba CF, Go VF, Powell BJ, Muessig K, Golin C, Dussault JM, Zimba CC, Matewere M, Mbota M, Thom A, Masa C, Malava JK, Gaynes BN, Masiye J, Udedi M, Hosseinipour M, Pence BW, Champion and audit and feedback strategy fidelity and their relationship to depression intervention fidelity: A mixed method study., SSM Ment Health 2023 Dec; 3(): .

Yassine I, Rafei R, Pardos de la Gandara M, Osman M, Fabre L, Dabboussi F, Hamze M, Weill FX, Genomic analysis of Shigella isolates from Lebanon reveals marked genetic diversity and antimicrobial resistance., Microb Genom 2023 Dec; 9(12): .

Leblanc J, Dusserre-Telmon L, Chauvin A, Simon T, Sabbatini CE, Hemming K, Colizza V, Bérard L, Convert J, Lazazga S, Jegou C, Taibi N, Dautheville S, Zaghia D, Gerlier C, Domergue M, Larrouturou F, Bonnet F, Fontanet A, Salhi S, LeGoff J, Crémieux AC, Intensified screening for SARS-CoV-2 in 18 emergency departments in the Paris metropolitan area, France (DEPIST-COVID): A cluster-randomized, two-period, crossover trial., PLoS Med 2023 Dec; 20(12): e1004317.

Andronico A, Menudier L, Salje H, Vincent M, Paireau J, de Valk H, Gallian P, Pastorino B, Brady O, de Lamballerie X, Lazarus C, Paty MC, Vilain P, Noel H, Cauchemez S, Comparing the Performance of Three Models Incorporating Weather Data to Forecast Dengue Epidemics in Reunion Island, 2018-2019., J Infect Dis 2023 Nov; (): .

Oudin Doglioni D, Gagneux-Brunon A, Gauchet A, Bruel S, Olivier C, Pellissier G, Thilly N, Sicsic J, Raude J, Mueller JE, Psychometric validation of a 7C-model of antecedents of vaccine acceptance among healthcare workers, parents and adolescents in France., Sci Rep 2023 Nov; 13(1): 19895.

Pandolfi F, Brun-Buisson C, Guillemot D, Watier L, Care pathways of sepsis survivors: sequelae, mortality and use of healthcare services in France, 2015-2018., Crit Care 2023 Nov; 27(1): 438.

Tan-Lhernould L, Tamandjou C, Deschamps G, Platon J, Sommen C, Chereau F, Parent du Châtelet I, Cauchemez S, Vaux S, Paireau J, Impact of vaccination against severe COVID-19 in the French population aged 50 years and above: a retrospective population-based study., BMC Med 2023 Nov; 21(1): 426.

Brémont S, Passet V, Hennart M, Fonteneau L, Toubiana J, Badell E, Brisse S, Multidrug-resistant Corynebacterium diphtheriae in people with travel history from West Africa to France, March to September 2023., Euro Surveill 2023 Nov; 28(46): .

Moffroid H, Doglioni DO, Chyderiotis S, Sicsic J, Barret AS, Raude J, Bruel S, Gauchet A, Michel M, Gagneux-Brunon A, Thilly N, Mueller JE, Can physicians and schools mitigate social inequalities in human papillomavirus vaccine awareness, uptake and vaccination intention among adolescents? A cross-sectional study, France, 2021 to 2022., Euro Surveill 2023 Nov; 28(46): .

Smith DRM, Chervet S, Pinettes T, Shirreff G, Jijón S, Oodally A, Jean K, Opatowski L, Kernéis S, Temime L, How have mathematical models contributed to understanding the transmission and control of SARS-CoV-2 in healthcare settings? A systematic search and review., J Hosp Infect 2023 Nov; 141(): 132-141.

Nadimpalli ML, Stegger M, Viau R, Yith V, de Lauzanne A, Sem N, Borand L, Huynh BT, Brisse S, Passet V, Overballe-Petersen S, Aziz M, Gouali M, Jacobs J, Phe T, Hungate BA, Leshyk VO, Pickering AJ, Gravey F, Liu CM, Johnson TJ, Hello SL, Price LB, Plugging the leaks: antibiotic resistance at human-animal interfaces in low-resource settings., Front Ecol Environ 2023 Nov; 21(9): 428-434.

De Silva PM, Bennett RJ, Kuhn L, Ngondo P, Debande L, Njamkepo E, Ho B, Weill FX, Marteyn BS, Jenkins C, Baker KS, Escherichia coli killing by epidemiologically successful sublineages of Shigella sonnei is mediated by colicins., EBioMedicine 2023 Nov; 97(): 104822.

Devred I, Rambliere L, Herindrainy P, Andriamarohasina L, Harimanana A, Randrianirina F, Ratsima EH, Hivernaud D, Kermorvant-Duchemin E, Andrianirina ZZ, Abdou AY, Delarocque-Astagneau E, Guillemot D, Crucitti T, Collard JM, Huynh BT, Incidence and risk factors of neonatal bacterial infections: a community-based cohort from Madagascar (2018-2021)., BMC Infect Dis 2023 Oct; 23(1): 658.

Mphonda S, Dussault J, Bengtson A, Gaynes BN, Go V, Hosseinipour MC, Kulisewa K, Kutengule A, Meltzer-Brody S, Udedi M, Pence B, Preferences for enhanced treatment options to address HIV care engagement among women living with HIV and perinatal depression in Malawi., BMC Public Health 2023 Oct; 23(1): 1922.

Josée Dussault, A S Le Duc-Banaszuk, Amandine Gagneux-Brunon, S Bruel, Aurélie Gauchet, A.S. Barret, Jonathan Sicsic, N Thilly, Judith E. Mueller, Effect of school-based HPV vaccine campaigns on inequalities in uptake in France: the PrevHPV trial, 16th European Public Health Conference 2023 Our Food, Our Health, Our Earth: A Sustainable Future for Humanity, Nov 2023, Dublin, Ireland. pp.ckad160.398, ⟨10.1093/eurpub/ckad160.398⟩.

Lassalle F, Al-Shalali S, Al-Hakimi M, Njamkepo E, Bashir IM, Dorman MJ, Rauzier J, Blackwell GA, Taylor-Brown A, Beale MA, Cazares A, Al-Somainy AA, Al-Mahbashi A, Almoayed K, Aldawla M, Al-Harazi A, Quilici ML, Weill FX, Dhabaan G, Thomson NR, Genomic epidemiology reveals multidrug resistant plasmid spread between Vibrio cholerae lineages in Yemen., Nat Microbiol 2023 Oct; 8(10): 1787-1798.

Jones G, Mariani-Kurkdjian P, Cointe A, Bonacorsi S, Lefèvre S, Weill FX, Le Strat Y, Sporadic Shiga Toxin-Producing Escherichia coli-Associated Pediatric Hemolytic Uremic Syndrome, France, 2012-2021., Emerg Infect Dis 2023 Oct; 29(10): 2054-2064.

Zhou X, Kang X, Chen J, Song Y, Jia C, Teng L, Tang Y, Jiang Z, Peng X, Tao X, Xu Y, Huang L, Xu X, Xu Y, Zhang T, Yu S, Gong J, Wang S, Liu Y, Zhu G, Kehrenberg C, Weill FX, Barrow P, Li Y, Zhao G, Yue M, Genome degradation promotes Salmonella pathoadaptation by remodeling fimbriae-mediated proinflammatory response., Natl Sci Rev 2023 Oct; 10(10): nwad228.

Bocquier A, Bruel S, Michel M, Le Duc-Banaszuk AS, Bonnay S, Branchereau M, Chevreul K, Chyderiotis S, Gauchet A, Giraudeau B, Hagiu DP, Mueller JE, Gagneux-Brunon A, Thilly N, Co-development of a school-based and primary care-based multicomponent intervention to improve HPV vaccine coverage amongst French adolescents (the PrevHPV Study)., Health Expect 2023 Oct; 26(5): 1843-1853.

Galmiche S, Charmet T, Rakover A, Schaeffer L, Chény O, von Platen C, Omar F, David C, Mailles A, Carrat F, Fontanet A, Risk of SARS-CoV-2 Infection Among Households With Children in France, 2020-2022., JAMA Netw Open 2023 Sep; 6(9): e2334084.

Lazarus JV, Mark HE, Allen AM, Arab JP, Carrieri P, Noureddin M, Alazawi W, Alkhouri N, Alqahtani SA, Arrese M, Bataller R, Berg T, Brennan PN, Burra P, Castro-Narro GE, Cortez-Pinto H, Cusi K, Dedes N, Duseja A, Francque SM, Hagström H, Huang TT, Wajcman DI, Kautz A, Kopka CJ, Krag A, Miller V, Newsome PN, Rinella ME, Romero D, Sarin SK, Silva M, Spearman CW, Tsochatzis EA, Valenti L, Villota-Rivas M, Zelber-Sagi S, Schattenberg JM, Wong VW, Younossi ZM, A global research priority agenda to advance public health responses to fatty liver disease., J Hepatol 2023 Sep; 79(3): 618-634.

Vo-Quang E, Bangura R, Adam N, Ndow G, Shimakawa Y, Lemoine M, Poor disease knowledge among people living with hepatitis B in The Gambia and Tanzania., Lancet Gastroenterol Hepatol 2023 Sep; 8(9): 783-784.

Ndow G, Vo-Quang E, Shimakawa Y, Ceesay A, Tamba S, Njai HF, Bojang L, Hateley C, Takao Y, Opoku E, Warsop Z, Ingiliz P, D'Alessandro U, Chemin I, Mendy M, Thursz M, Njie R, Lemoine M, Clinical characteristics and outcomes of patients with cirrhosis and hepatocellular carcinoma in The Gambia, west Africa: a prospective cohort study., Lancet Glob Health 2023 Sep; 11(9): e1383-e1392.

Melanie Hennart, Chiara Crestani, Sebastien Bridel, Nathalie Armatys, Sylvie Brémont, Annick Carmi-Leroy, Annie Landier, Virginie Passet, Laure Fonteneau, Sophie Vaux, Julie Toubiana, Edgar Badell, Sylvain Brisse, A global Corynebacterium diphtheriae genomic framework sheds light on current diphtheria reemergence, Peer Community Journal, 2023, 3, pp.e76. ⟨10.24072/pcjournal.307⟩.

Reynes JM, Schaeffer L, Papadopoulos P, Ait-Ahmed M, Siby-Diakite D, Ripaux-Lefèvre M, Buivan TP, Lechat S, Vray M, Galempoix JM, Molecular Detection of Orthohantavirus puumalaense in Plasma and Urine Samples from Hospitalized Patients Presenting with a Serologically Confirmed Acute Hantavirus Infection in France., J Clin Microbiol 2023 Aug; 61(8): e0037223.

Araujo-Chaveron L, Sicsic J, Moffroid H, Díaz Luévano C, Blondel S, Langot F, Mueller JE, Impact of a COVID-19 certificate requirement on vaccine uptake pattern and intention for future vaccination. A cross-sectional study among French adults., Vaccine 2023 Aug; 41(37): 5412-5423.

Franconeri L, Antona D, Cauchemez S, Lévy-Bruhl D, Paireau J, Two-dose measles vaccine effectiveness remains high over time: A French observational study, 2017-2019., Vaccine 2023 Aug; (): .

Crestani C, Arcari G, Landier A, Passet V, Garnier D, Brémont S, Armatys N, Carmi-Leroy A, Toubiana J, Badell E, Brisse S, Corynebacterium ramonii sp. nov., a novel toxigenic member of the Corynebacterium diphtheriae species complex., Res Microbiol 2023 Aug; (): 104113.

Shahin K, Soleimani-Delfan A, He Z, Sansonetti P, Collard JM, Metagenomics revealed a correlation of gut phageome with autism spectrum disorder., Gut Pathog 2023 Aug; 15(1): 39.

Razanajatovo IM, Andrianomiadana L, Habib A, Randrianarisoa MM, Razafimanjato H, Rakotondrainipiana M, Andriantsalama P, Randriamparany R, Andriamandimby SF, Vonaesch P, Sansonetti PJ, Lacoste V, Randremanana RV, Collard JM, Heraud JM, On Behalf Of The Afribiota Investigators, Factors Associated with Carriage of Enteropathogenic and Non-Enteropathogenic Viruses: A Reanalysis of Matched Case-Control Data from the AFRIBIOTA Site in Antananarivo, Madagascar., Pathogens 2023 Aug; 12(8): .

Gay N, Rabenandrasana MAN, Panandiniaina HP, Rakotoninidrina MF, Ramahatafandry IT, Enouf V, Roger F, Collard JM, Cardinale E, Rieux A, Loire E, One Health compartment analysis of ESBL-producing Escherichia coli reveals multiple transmission events in a rural area of Madagascar., J Antimicrob Chemother 2023 Aug; 78(8): 1848-1858.

Garrigos T, Grimal A, Badell E, Traversier N, Picot S, Lignereux A, Ramiandrisoa M, Ben Cimon C, Jaffar-Bandjee MC, Gbaguidi-Haore H, Toubiana J, Brisse S, Miltgen G, Belmonte O, Emerging Corynebacterium diphtheriae Species Complex Infections, Réunion Island, France, 2015-2020., Emerg Infect Dis 2023 Aug; 29(8): 1630-1633.

Galmiche S, Thoreau B, Bretagne S, Alanio A, Paugam A, Letscher-Bru V, Cassaing S, Gangneux JP, Guegan H, Favennec L, Minoza A, Morio F, Bonhomme J, Desoubeaux G, Eloy O, Hasseine L, Sasso M, Millon L, Bellanger AP, Poirier P, Moniot M, Chouaki T, Huguenin A, Dalle F, Bouteille B, Nicolas M, Desbois-Nogard N, Bougnoux ME, Danion F, Poindron V, Néel A, Boukris-Sitbon K, Lanternier F, Terrier B, Invasive fungal diseases in patients with autoimmune diseases: a case series from the French RESSIF network., RMD Open 2023 Aug; 9(3): .

Smith AM, Sekwadi P, Erasmus LK, Lee CC, Stroika SG, Ndzabandzaba S, Alex V, Nel J, Njamkepo E, Thomas J, Weill FX, Imported Cholera Cases, South Africa, 2023., Emerg Infect Dis 2023 Aug; 29(8): 1687-1690.

de Melo GD, Perraud V, Alvarez F, Vieites-Prado A, Kim S, Kergoat L, Coleon A, Trüeb BS, Tichit M, Piazza A, Thierry A, Hardy D, Wolff N, Munier S, Koszul R, Simon-Lorière E, Thiel V, Lecuit M, Lledo PM, Renier N, Larrous F, Bourhy H, Neuroinvasion and anosmia are independent phenomena upon infection with SARS-CoV-2 and its variants., Nat Commun 2023 Jul; 14(1): 4485.

Holtz A, Baele G, Bourhy H, Zhukova A, Integrating full and partial genome sequences to decipher the global spread of canine rabies virus., Nat Commun 2023 Jul; 14(1): 4247.

Crippa C, Pasquali F, Rodrigues C, De Cesare A, Lucchi A, Gambi L, Manfreda G, Brisse S, Palma F, Genomic features of Klebsiella isolates from artisanal ready-to-eat food production facilities., Sci Rep 2023 Jul; 13(1): 10957.

Isa YS, Sicsic J, Njuguna H, Ward J, Chakroun M, El-Kassas M, Ramanampamonjy R, Chalal S, Vincent JP, Andersson M, Desalegn H, Fall F, Johannessen A, Matthews PC, Ndow G, Okeke E, Riches N, Seydi M, Sinkala E, Spearman CW, Stockdale A, Vinikoor MJ, Wandeler G, Sombié R, Lemoine M, Mueller JE, Shimakawa Y, Informing a target product profile for rapid tests to identify HBV-infected pregnant women with high viral loads: a discrete choice experiment with African healthcare workers., BMC Med 2023 Jul; 21(1): 243.

Nayagam S, de Villiers MJ, Shimakawa Y, Lemoine M, Thursz MR, Walsh N, Hallett TB, Impact and cost-effectiveness of hepatitis B virus prophylaxis in pregnancy: a dynamic simulation modelling study., Lancet Gastroenterol Hepatol 2023 Jul; 8(7): 635-645.

Rahbe E, Watier L, Guillemot D, Glaser P, Opatowski L, Determinants of worldwide antibiotic resistance dynamics across drug-bacterium pairs: a multivariable spatial-temporal analysis using ATLAS., Lancet Planet Health 2023 Jul; 7(7): e547-e557.

De Thoisy A, Woudenberg T, Pelleau S, Donnadieu F, Garcia L, Pinaud L, Tondeur L, Meola A, Arowas L, Clement N, Backovic M, Ungeheuer MN, Fontanet A, White M, Seroepidemiology of the Seasonal Human Coronaviruses NL63, 229E, OC43 and HKU1 in France., Open Forum Infect Dis 2023 Jul; 10(7): ofad340.

Galmiche S, Charmet T, Madec Y, Rakover A, Schaeffer L, Chény O, Omar F, Martin S, Mailles A, Carrat F, Fontanet A, Reduction of SARS-CoV-2 intra-household child-to-parent transmission associated with ventilation: results from a case-control study., BMC Public Health 2023 Jun; 23(1): 1240.

Mattern C, Pourette D, Andriamandimby SF, Rabarison J, Darsot A, Ralaizara B, Vray M, Shimakawa Y, Giles-Vernick T, Enjeux et difficultés de l’accès aux traitements pour la prise en charge de l’hépatite B chronique à Madagascar : étude qualitative auprès des soignants et personnes atteintes, Rev Epidemiol Sante Publique 2023 Jun; 71(4): 102088.

Lourenço M, Osbelt L, Passet V, Gravey F, Megrian D, Strowig T, Rodrigues C, Brisse S, Phages against Noncapsulated Klebsiella pneumoniae: Broader Host range, Slower Resistance., Microbiol Spectr 2023 Jun; (): e0481222.

Hubert M, Guivel-Benhassine F, Bruel T, Porrot F, Planas D, Vanhomwegen J, Wiedemann A, Burrel S, Marot S, Palich R, Monsel G, Diombera H, Gallien S, Lopez-Zaragoza JL, Vindrios W, Taieb F, Fernandes-Pellerin S, Delhaye M, Laude H, Arowas L, Ungeheuer MN, Hocqueloux L, Pourcher V, Prazuck T, Marcelin AG, Lelièvre JD, Batéjat C, Lévy Y, Manuguerra JC, Schwartz O, Complement-dependent mpox-virus-neutralizing antibodies in infected and vaccinated individuals., Cell Host Microbe 2023 Jun; 31(6): 937-948.e4.

Cuypers WL, Meysman P, Weill FX, Hendriksen RS, Beyene G, Wain J, Nair S, Chattaway MA, Perez-Sepulveda BM, Ceyssens PJ, de Block T, Lee WWY, Pardos de la Gandara M, Kornschober C, Moran-Gilad J, Veldman KT, Cormican M, Torpdahl M, Fields PI, Černý T, Hardy L, Tack B, Mellor KC, Thomson N, Dougan G, Deborggraeve S, Jacobs J, Laukens K, Van Puyvelde S, A global genomic analysis of Salmonella Concord reveals lineages with high antimicrobial resistance in Ethiopia., Nat Commun 2023 Jun; 14(1): 3517.

Beggaz M, Guiddir T, Hong E, Deghmane AE, Taha MK, Characteristics of Meningococcal Invasive Disease in Neonates and Virulence of the Corresponding Isolates., Neonatology 2023 Jun; (): 1-7.

Besombes C, Mbrenga F, Malaka C, Gonofio E, Schaeffer L, Konamna X, Selekon B, Namsenei-Dankpea J, Gildas Lemon C, Landier J, von Platen C, Gessain A, Manuguerra JC, Fontanet A, Nakouné E, Investigation of a mpox outbreak in Central African Republic, 2021-2022., One Health 2023 Jun; 16(): 100523.

Galmiche S, Cortier T, Charmet T, Schaeffer L, Chény O, von Platen C, Lévy A, Martin S, Omar F, David C, Mailles A, Carrat F, Cauchemez S, Fontanet A, SARS-CoV-2 incubation period across variants of concern, individual factors, and circumstances of infection in France: a case series analysis from the ComCor study., Lancet Microbe 2023 Jun; 4(6): e409-e417.

Ardillon A, Ramblière L, Kermorvant-Duchemin E, Sok T, Zo AZ, Diouf JB, Long P, Lach S, Sarr FD, Borand L, Cheysson F, Collard JM, Herindrainy P, de Lauzanne A, Vray M, Delarocque-Astagneau E, Guillemot D, Huynh BT, Inappropriate antibiotic prescribing and its determinants among outpatient children in 3 low- and middle-income countries: A multicentric community-based cohort study., PLoS Med 2023 Jun; 20(6): e1004211.

Smith DRM, Shirreff G, Temime L, Opatowski L, Collateral impacts of pandemic COVID-19 drive the nosocomial spread of antibiotic resistance: A modelling study., PLoS Med 2023 Jun; 20(6): e1004240.

Woudenberg T, Pinaud L, Garcia L, Tondeur L, Pelleau S, De Thoisy A, Donnadieu F, Backovic M, Attia M, Hozé N, Duru C, Koffi AD, Castelain S, Ungeheuer MN, Fernandes Pellerin S, Planas D, Bruel T, Cauchemez S, Schwartz O, Fontanet A, White M, Estimated protection against COVID-19 based on predicted neutralisation titres from multiple antibody measurements in a longitudinal cohort, France, April 2020 to November 2021., Euro Surveill 2023 Jun; 28(25): .

Deghmane AE, Hong E, Taha MK, Recent Evolution of Susceptibility to Beta-Lactams in Neisseria meningitidis., Antibiotics (Basel) 2023 Jun; 12(6): .

Bonner KE, Chyderiotis S, Sicsic J, Mueller JE, Ulrich AK, Toomey T, Horvath KJ, Neaton JD, Basta NE, What motivates adults to accept influenza vaccine? An assessment of incentives, ease of access, messaging, and sources of information using a discrete choice experiment., SSM Popul Health 2023 Jun; 22(): 101384.

Galmiche S, Charmet T, Mailles A, Fontanet A, Reply to: The role of pets in SARS-CoV-2 transmission: an exploratory analysis., Infection 2023 Jun; 51(3): 793-795.

Rachel Bellone, Pierre Lechat, Laurence Mousson, Valentine Gilbart, Géraldine Piorkowski, Chloé Bohers, Andres Merits, Etienne Kornobis, Julie Reveillaud, Christophe Paupy, Marie Vazeille, Jean-Philippe Martinet, Yoann Madec, Xavier de Lamballerie, Catherine Dauga, Anna-Bella Failloux, Climate change and vector-borne diseases: a multi-omics approach of temperature-induced changes in the mosquito, Journal of Travel Medicine, 2023, 30 (4), pp.taad062. ⟨10.1093/jtm/taad062⟩.

Vincent JP, Existe AV, Komaki-Yasuda K, Boncy J, Kano S, Performance of the procedure for ultra-rapid extraction and loop-mediated isothermal amplification (PURE-LAMP) method to detect malaria in Haiti., Infect Dis Poverty 2023 May; 12(1): 53.

Ansari A, Vincent JP, Moorhouse L, Shimakawa Y, Nayagam S, Risk of early horizontal transmission of hepatitis B virus in children of uninfected mothers in sub-Saharan Africa: a systematic review and meta-analysis., Lancet Glob Health 2023 May; 11(5): e715-e728.

Supplisson O, Charmet T, Galmiche S, Schaeffer L, Chény O, Lévy A, Jeandet N, Omar F, David C, Mailles A, Fontanet A, SARS-CoV-2 self-test uptake and factors associated with self-testing during Omicron BA.1 and BA.2 waves in France, January to May 2022., Euro Surveill 2023 May; 28(18): .

Soraya Matczak, Valérie Bouchez, Pauline Leroux, Thibaut Douché, Nils Collinet, Annie Landier, Quentin Giai Gianetto, Sophie Guillot, Julia Chamot-Rooke, Milena Hasan, Mariette Matondo, Sylvain Brisse, Julie Toubiana, Biological differences between FIM2 and FIM3 fimbriae of Bordetella pertussis: not just the serotype, Microbes and Infection, 2023, pp.105152. ⟨10.1016/j.micinf.2023.105152⟩.

Smith DRM, Jijón S, Oodally A, Shirreff G, Aït Bouziad K, Ante-Testard PA, Bastard J, Bouziri H, Daouda OS, Duchemin T, Godon-Rensonnet AS, Henriot P, Houri Y, Neynaud H, Perozziello A, Thonon F, Crépey P, Dab W, Jean K, Temime L, Sick leave due to COVID-19 during the first pandemic wave in France, 2020., Occup Environ Med 2023 May; 80(5): 268-272.

Harazim M, Perrot J, Varet H, Bourhy H, Lannoy J, Pikula J, Seidlová V, Dacheux L, Martínková N, , Transcriptomic responses of bat cells to European bat lyssavirus 1 infection under conditions simulating euthermia and hibernation., BMC Immunol 2023 Apr; 24(1): 7.

Balière C, Hourdel V, Kwasiborski A, Grassin Q, Feher M, Hoinard D, Vanhomwegen J, Taieb F, Consigny PH, Manuguerra JC, Leclercq I, Batéjat C, Caro V, Complete Genome Sequences of Monkeypox Virus from a French Clinical Sample and the Corresponding Isolated Strain, Obtained Using Nanopore Sequencing., Microbiol Resour Announc 2023 Apr; 12(4): e0000923.

Rambliere L, de Lauzanne A, Diouf JB, Zo AZ, Landau M, Herindrainy P, Hivernaud D, Sarr FD, Sok T, Vray M, Collard JM, Borand L, Delarocque-Astagneau E, Guillemot D, Kermorvant-Duchemin E, Huynh BT, Stillbirths and neonatal mortality in LMICs: A community-based mother-infant cohort study., J Glob Health 2023 Apr; 13(): 04031.

Tessier E, Hennart M, Badell E, Passet V, Toubiana J, Biron A, Gourinat AC, Merlet A, Colot J, Brisse S, Genomic Epidemiology of Corynebacterium diphtheriae in New Caledonia., Microbiol Spectr 2023 Apr; (): e0461622.

Mason LCE, Greig DR, Cowley LA, Partridge SR, Martinez E, Blackwell GA, Chong CE, Malaka De Silva P, Bengtsson RJ, Draper JL, Ginn AN, Sandaradura I, Sim EM, Iredell JR, Sintchenko V, Ingle DJ, Howden BP, Lefèvre S, Njampeko E, Weill FX ,Ceyssens PJ, Jenkins C & Baker KS, The evolution and international spread of extensively drug resistant Shigella sonnei, Nat Commun 14, 1983 (2023).

Museux K, Arcari G, Rodrigo G, Hennart M, Badell E, Toubiana J, Brisse S, Corynebacteria of the diphtheriae Species Complex in Companion Animals: Clinical and Microbiological Characterization of 64 Cases from France., Microbiol Spectr 2023 Apr; (): e0000623.

Riches N, Vinikoor M, Guingane A, Johannessen A, Lemoine M, Matthews P, Okeke E, Shimakawa Y, Sombie R, Stockdale A, Wandeler G, Andersson M, Davwar P, Desalegn H, Duguru M, Fall F, Maponga T, Nyam Paul D, Seydi M, Sinkala E, Taljaard J, Sonderup M, Spearman CW, Hepatitis B in Africa Collaborative Network: cohort profile and analysis of baseline data., Epidemiol Infect 2023 Apr; 151(): e65.

Verrier F, de Lauzanne A, Diouf JN, Zo AZ, Ramblière L, Herindrainy P, Sarr FD, Sok T, Vray M, Collard JM, Borand L, Kermorvant-Duchemin E, Delarocque-Astagneau E, Guillemot D, Huynh BT, Vaccination Coverage and Risk Factors Associated With Incomplete Vaccination Among Children in Cambodia, Madagascar, and Senegal., Open Forum Infect Dis 2023 Apr; 10(4): ofad136.

Duval A, Opatowski L, Brisse S, , Defining genomic epidemiology thresholds for common-source bacterial outbreaks: a modelling study., Lancet Microbe 2023 Mar; (): .

Ramassamy JL, Bilounga Ndongo C, Nnuka P, Antunes M, Le Mener M, Betsem A Betsem E, Njouom R, Cassar O, Fontanet A, Gessain A, Epidemiological Evidence of Nosocomial and Zoonotic Transmission of Human T-Cell Leukemia Virus-1 in a Large Survey in a Rural Population of Central Africa., J Infect Dis 2023 Mar; 227(6): 752-760.

Nodari CS, Opazo-Capurro A, Castillo-Ramirez S, Mattioni Marchetti V, , Editorial: Mobile genetic elements as dissemination drivers of multidrug-resistant Gram-negative bacteria., Front Cell Infect Microbiol 2023 ; 13(): 1180510.

Bocquier A, Branchereau M, Gauchet A, Bonnay S, Simon M, Ecollan M, Chevreul K, Mueller JE, Gagneux-Brunon A, Thilly N, Promoting HPV vaccination at school: a mixed methods study exploring knowledge, beliefs and attitudes of French school staff., BMC Public Health 2023 Mar; 23(1): 486.

Curaudeau M, Besombes C, Nakouné E, Fontanet A, Gessain A, Hassanin A, Identifying the Most Probable Mammal Reservoir Hosts for Monkeypox Virus Based on Ecological Niche Comparisons., Viruses 2023 Mar; 15(3): .

Wong A, Barrero Guevara LA, Goult E, Briga M, Kramer SC, Kovacevic A, Opatowski L, Domenech de Cellès M, The interactions of SARS-CoV-2 with cocirculating pathogens: Epidemiological implications and current knowledge gaps., PLoS Pathog 2023 Mar; 19(3): e1011167.

Yassine I, Hansen EE, Lefèvre S, Ruckly C, Carle I, Lejay-Collin M, Fabre L, Rafei R, Pardos de la Gandara M, Daboussi F, Shahin A, Weill FX, ShigaPass: an in silico tool predicting Shigella serotypes from whole-genome sequencing assemblies., Microb Genom 2023 Mar; 9(3): .

Gilles C Martin, Margot Denier, Anne Le Fleche-Mateos, Spiroplasma-induced Uveitis Mimicking Congenital Glaucoma in a Newborn, Ophthalmology: Journal of The American Academy of Ophthalmology, 2023, 130 (3), pp.255. ⟨10.1016/j.ophtha.2022.06.007⟩.

Bonneault M, Delarocque-Astagneau E, Flauder M, Bogaards JA, Guillemot D, Opatowski L, Thiébaut ACM, , Ability of epidemiological studies to monitor HPV post-vaccination dynamics: a simulation study., Epidemiol Infect 2023 Feb; 151(): e31.

Nguyen LBL, Soumah AA, Hoang VT, Nguyen AT, Pham TH, Royer-Devaux S, Madec Y, Performances of Dried Blood Spots and Point-of-Care Devices to Identify Virological Failure in HIV-Infected Patients: A Systematic Review and Meta-Analysis., AIDS Patient Care STDS 2023 Feb; 37(2): 66-83.

Foster-Nyarko E, Cottingham H, Wick RR, Judd LM, Lam MMC, Wyres KL, Stanton TD, Tsang KK, David S, Aanensen DM, Brisse S, Holt KE, Nanopore-only assemblies for genomic surveillance of the global priority drug-resistant pathogen, Klebsiella pneumoniae., Microb Genom 2023 Feb; 9(2): .

Sicsic J, Blondel S, Chyderiotis S, Langot F, Mueller JE, Preferences for COVID-19 epidemic control measures among French adults: a discrete choice experiment., Eur J Health Econ 2023 Feb; 24(1): 81-98.

Lefèvre S, Njamkepo E, Feldman S, Ruckly C, Carle I, Lejay-Collin M, Fabre L, Yassine I, Frézal L, Pardos de la Gandara M, Fontanet A, Weill FX, Rapid emergence of extensively drug-resistant Shigella sonnei in France., Nat Commun 2023 Jan; 14(1): 462.

Schmit N, Nayagam S, Lemoine M, Ndow G, Shimakawa Y, Thursz MR, Hallett TB, , Cost-effectiveness of different monitoring strategies in a screening and treatment programme for hepatitis B in The Gambia., J Glob Health 2023 Jan; 13(): 04004.

Munk P, Brinch C, Møller FD, Petersen TN, Hendriksen RS, Seyfarth AM, Kjeldgaard JS, Svendsen CA, van Bunnik B, Berglund F, , Larsson DGJ, Koopmans M, Woolhouse M, Aarestrup FM, Author Correction: Genomic analysis of sewage from 101 countries reveals global landscape of antimicrobial resistance., Nat Commun 2023 Jan; 14(1): 178.

Johannessen A, Stockdale AJ, Henrion MYR, Okeke E, Seydi M, Wandeler G, Sonderup M, Spearman CW, Vinikoor M, Sinkala E, Desalegn H, Fall F, Riches N, Davwar P, Duguru M, Maponga T, Taljaard J, Matthews PC, Andersson M, Mboup S, Sombie R, Shimakawa Y, Lemoine M, , Systematic review and individual-patient-data meta-analysis of non-invasive fibrosis markers for chronic hepatitis B in Africa., Nat Commun 2023 Jan; 14(1): 45.

Brault A, Tran-Kiem C, Couteaux C, Olié V, Paireau J, Yazdanpanah Y, Ghosn J, Martin-Blondel G, Bosetti P, Cauchemez S, , Modelling the end of a Zero-COVID strategy using nirmatrelvir/ritonavir, vaccination and NPIs in Wallis and Futuna., Lancet Reg Health West Pac 2023 Jan; 30(): 100634.

Pardos de la Gandara M, Fournet N, Bonifait L, Lefèvre S, Chemaly M, Grastilleur C, Cadel-Six S, Fach P, Pignault A, Brisabois A, Jourdan-Da Silva N, Weill FX, Countrywide multi-serotype outbreak of Salmonella Bovismorbificans ST142 and monophasic Salmonella Typhimurium ST34 associated with dried pork sausages in France, September 2020* to January 2021., Euro Surveill 2023 Jan; 28(2): .

Layan M, Müller NF, Dellicour S, De Maio N, Bourhy H, Cauchemez S, Baele G, Impact and mitigation of sampling bias to determine viral spread: Evaluating discrete phylogeography through CTMC modeling and structured coalescent model approximations., Virus Evol 2023 ; 9(1): vead010.

Landrum KR, Akiba CF, Pence BW, Akello H, Chikalimba H, Dussault JM, Hosseinipour MC, Kanzoole K, Kulisewa K, Malava JK, Udedi M, Zimba CC, Gaynes BN, Assessing suicidality during the SARS-CoV-2 pandemic: Lessons learned from adaptation and implementation of a telephone-based suicide risk assessment and response protocol in Malawi., PLoS One 2023 ; 18(3): e0281711.

Dussault JM, Zimba C, Akello H, Stockton M, Hill S, Aiello AE, Keil A, Gaynes BN, Udedi M, Pence BW, Estimating the effect of anticipated depression treatment-related stigma on depression remission among people with noncommunicable diseases and depressive symptoms in Malawi., PLoS One 2023 ; 18(3): e0282016.

Arcari G, Hennart M, Badell E, Brisse S, Multidrug-resistant toxigenic Corynebacterium diphtheriae sublineage 453 with two novel resistance genomic islands., Microb Genom 2023 Jan; 9(1): .

Vonaesch P, Billy V, Mann AE, Morien E, Habib A, Collard JM, Dédé M, Kapel N, Sansonetti PJ, Parfrey LW, The eukaryome of African children is influenced by geographic location, gut biogeography, and nutritional status., Microlife 2023 ; 4(): uqad033.

Jean K, Tawheed A, Luong Nguyen LB, Heikal T, Eldaly U, Elhadidy N, Elghaieb A, Aboudonia A, Tondeur L, Dublineau A, Fontanet A, El-Kassas M, Changes in Presentation, Treatment, and Survival of Patients with Hepatocellular Carcinoma in Damietta, Egypt, 2007-2019: A Retrospective Monocentric Cohort Study., J Hepatocell Carcinoma 2023 ; 10(): 99-111.

Teiti I, Aubry M, Fernandes-Pellerin S, Patin E, Madec Y, Boucheron P, Vanhomwegen J, Torterat J, Lastère S, Olivier S, Jaquaniello A, Roux M, Mendiboure V, Harmant C, Bisiaux A, Rijo de León G, Liu D, Bossin H, Mathieu-Daudé F, Gatti C, Suhas E, Chung K, Condat B, Ayotte P, Conte E, Jolly N, Manuguerra JC, Sakuntabhai A, Fontanet A, Quintana-Murci L, Cao-Lormeau VM, Unravelling the determinants of human health in French Polynesia: the MATAEA project., Front Epidemiol 2023 ; 3(): 1201038.

Dussault JM, Akiba C, Zimba C, Malava J, Akello H, Stockton M, Mbota M, Matewere M, Masiye J, Udedi M, Gaynes BN, Go VF, Hosseinipour MC, Pence BW, Evaluating the validity of depression-related stigma measurement among diabetes and hypertension patients receiving depression care in Malawi: A mixed-methods analysis., PLOS Glob Public Health 2023 ; 3(5): e0001374.

Hounmanou YMG, Njamkepo E, Rauzier J, Gallandat K, Jeandron A, Kamwiziku G, Porten K, Luquero F, Abedi AA, Rumedeka BB, Miwanda B, Michael M, Okitayemba PW, Saidi JM, Piarroux R, Weill FX, Dalsgaard A, Quilici ML, Genomic Microevolution of Vibrio cholerae O1, Lake Tanganyika Basin, Africa., Emerg Infect Dis 2023 Jan; 29(1): 149-153.

Guillo L, Flachaire B, Avouac J, Dong C, Nachury M, Bouguen G, Buisson A, Caillo L, Fumery M, Gilletta C, Hébuterne X, Lafforgue P, Laharie D, Mahé E, Marotte H, Nancey S, Ottaviani S, Salmon JH, Savoye G, Serrero M, Uzzan M, Viguier M, Richez C, Peyrin-Biroulet L, Seksik P, Pham T, Efficacy and safety of combination targeted therapies in immune-mediated inflammatory disease: the COMBIO study., Dig Liver Dis 2023 Jan; 55(1): 61-68.

Mueller JE, Serogroup B meningococcal vaccines from the public health perspective., Lancet Infect Dis 2023 Jan; 23(1): 13-14.

Feige L, Kozaki T, Dias de Melo G, Guillemot V, Larrous F, Ginhoux F, Bourhy H, , Susceptibilities of CNS Cells towards Rabies Virus Infection Is Linked to Cellular Innate Immune Responses., Viruses 2022 Dec; 15(1): .

Kulisewa K, Dussault JM, Gaynes BN, Hosseinipour MC, Go VF, Kutengule A, LeMasters K, Meltzer-Brody S, Midiani D, Mphonda SM, Udedi M, Pence BW, Bengtson AM, The feasibility and acceptability of a task-shifted intervention for perinatal depression among women living with HIV in Malawi: a qualitative analysis., BMC Psychiatry 2022 Dec; 22(1): 833.

Yu C, Zuo L, Miao J, Mao L, Selekon B, Gonofio E, Nakoune E, Berthet N, Wong G, Development of a Novel Loop-Mediated Isothermal Amplification Method for the Rapid Detection of Monkeypox Virus Infections., Viruses 2022 Dec; 15(1): .

Grant R, Flechelles O, Elenga N, Tressières B, Gaete S, Hebert JC, Schaub B, Djossou F, Mallard A, Delver L, Ryan C, Funk AL, Cabié A, Fontanet A, Hoen B, Consequences of In Utero Zika Virus Exposure and Adverse Pregnancy and Early Childhood Outcomes: A Prospective Cohort Study., Viruses 2022 Dec; 14(12): .

Thorpe HA, Booton R, Kallonen T, Gibbon MJ, Couto N, Passet V, López-Fernández S, Rodrigues C, Matthews L, Mitchell S, Reeve R, David S, Merla C, Corbella M, Ferrari C, Comandatore F, Marone P, Brisse S, Sassera D, Corander J, Feil EJ, , A large-scale genomic snapshot of Klebsiella spp. isolates in Northern Italy reveals limited transmission between clinical and non-clinical settings., Nat Microbiol 2022 Dec; 7(12): 2054-2067.

Bailly S, Hozé N, Bisser S, Zhu-Soubise A, Fritzell C, Fernandes-Pellerin S, Mbouangoro A, Rousset D, Djossou F, Cauchemez S, Flamand C,, Transmission dynamics of Q fever in French Guiana: A population-based cross-sectional study., Lancet Reg Health Am 2022 Dec; 16(): 100385.

Camille Besombes, Festus Mbrenga, Laura Schaeffer, Christian Malaka, Ella Gonofio, Jordi Landier, Ulrich Vickos, Xavier Konamna, Benjamin Selekon, Joella Namsenei Dankpea, Cassandre von Platen, Franck Gislain Houndjahoue, Daniel Sylver Ouaïmon, Alexandre Hassanin, Nicolas Berthet, Jean-Claude Manuguerra, Antoine Gessain, Arnaud Fontanet, Emmanuel Nakouné-Yandoko, National Monkeypox Surveillance, Central African Republic, 2001-2021., Emerging Infectious Diseases, 2022, 28 (12), pp.2435-2445. ⟨10.3201/eid2812.220897⟩.

Munk P, Brinch C, Møller FD, Petersen TN, Hendriksen RS, Seyfarth AM, Kjeldgaard JS, Svendsen CA, van Bunnik B, Berglund F, , Larsson DGJ, Koopmans M, Woolhouse M, Aarestrup FM, Genomic analysis of sewage from 101 countries reveals global landscape of antimicrobial resistance., Nat Commun 2022 Dec; 13(1): 7251.

Pandolfi F, Brun-Buisson C, Guillemot D, Watier L, , One-year hospital readmission for recurrent sepsis: associated risk factors and impact on 1-year mortality-a French nationwide study., Crit Care 2022 Nov; 26(1): 371.

Lamoureux C, Rézig S, Le Bars H, Le Divenah F, Tandé D, Vélo-Suarez L, Badell E, Brisse S, Héry-Arnaud G, Beauruelle C, , Corynebacterium ulcerans as filamentous branching rods., Clin Microbiol Infect 2022 Nov; (): .

Jijón S, Al Shafie A, Hassan E, , Temime L, Jean K, El-Kassas M, Estimating the risk of incident SARS-CoV-2 infection among healthcare workers in quarantine hospitals: the Egyptian example., Sci Rep 2022 Nov; 12(1): 19773.

Anil Kumar, Anne Le Flèche-Matéos, Rakshak Kumar, Fabienne Lomprez, Frédéric Fichenick, Dharam Singh, Patrick a D Grimont, Sanjay Kumar, Rahnella sikkimica sp. nov., a novel cold-tolerant bacterium isolated from the glacier of Sikkim Himalaya with plant growth-promoting properties, Extremophiles, 2022, 26 (3), pp.35. ⟨10.1007/s00792-022-01283-y⟩.

Kumar A, Le Flèche-Matéos A, Kumar R, Lomprez F, Fichenick F, Singh D, Grimont PAD, Kumar S, Rahnella sikkimica sp. nov., a novel cold-tolerant bacterium isolated from the glacier of Sikkim Himalaya with plant growth-promoting properties., Extremophiles 2022 Nov; 26(3): 35.

Vincent JP, Existe AV, Komaki-Yasuda K, Boncy J, Kano S, Glucose-6-phosphate Dehydrogenase (G6PD) A-Variant Frequency and Novel Polymorphism in Haiti., Am J Trop Med Hyg 2022 Nov; 107(5): 1142-1144.

Woringer M, Porgho S, Fermanian C, Martiny N, Bar-Hen A, Mueller JE, High-spatial resolution epidemic surveillance of bacterial meningitis in the African meningitis belt in Burkina Faso., Sci Rep 2022 Nov; 12(1): 19451.

Vincent JP, Ndow G, Ogawa S, Ceesay A, Njie R, Sanneh B, Baldeh I, D'Alessandro U, Mendy M, Thursz M, Chemin I, Tanaka Y, Lemoine M, Shimakawa Y, Mac-2 binding protein glycosylation isomer (M2BPGi) to evaluate liver fibrosis and cancer in HBV-infected patients in West Africa., J Glob Health 2022 Nov; 12(): 04076.

Li Y, Teng L, Xu X, Li X, Peng X, Zhou X, Du J, Tang Y, Jiang Z, Wang Z, Jia C, Müller A, Kehrenberg C, Wang H, Wu B, Weill FX, Yue M, A nontyphoidal Salmonella serovar domestication accompanying enhanced niche adaptation., EMBO Mol Med 2022 Nov; 14(11): e16366.

Haschka T, Vergu E, Roche B, Poletto C, Opatowski L, , Retrospective analysis of SARS-CoV-2 omicron invasion over delta in French regions in 2021-22: a status-based multi-variant model., BMC Infect Dis 2022 Nov; 22(1): 815.

Mueller JE, Bauer J, Attitudes of healthcare professionals toward the COVID-19 vaccination campaign in France., Infect Dis Now 2022 Nov; 52(8S): S21-S22.

Vonaesch P, Araújo JR, Gody JC, Mbecko JR, Sanke H, Andrianonimiadana L, Naharimanananirina T, Ningatoloum SN, Vondo SS, Gondje PB, Rodriguez-Pozo A, Rakotondrainipiana M, Kandou KJE, Nestoret A, Kapel N, Djorie SG, Finlay BB, Wegener Parfrey L, Collard JM, Randremanana RV, Sansonetti PJ, Stunted children display ectopic small intestinal colonization by oral bacteria, which cause lipid malabsorption in experimental models., Proc Natl Acad Sci U S A 2022 Oct; 119(41): e2209589119.

Sow A, Lemoine M, Toure PS, Diop M, Lo G, De Veiga J, Pape OT, Seck K, Ndow G, Bojang L, Kane A, Oudiane M, Howell J, Nayagam S, Moutchia J, Chemin I, Mendy M, Toure-Kane C, Thursz M, Ka M, Shimakawa Y, Mboup S, , HBV continuum of care using community- and hospital-based screening interventions in Senegal: Results from the PROLIFICA programme., JHEP Rep 2022 Oct; 4(10): 100533.

de Lauzanne A, Sreng N, Foucaud E, Sok T, Chon T, Yem C, Hak V, Heng S, Soda M, Gouali M, Nadimpalli M, Inghammar M, Rabenandrasana MAN, Collard JM, Vray M, Hello SL, Kerleguer A, Piola P, Delarocque-Astagneau E, Guillemot D, Huynh BT, Borand L, Prevalence and factors associated with faecal carriage of extended-spectrum β-lactamase-producing Enterobacterales among peripartum women in the community in Cambodia., J Antimicrob Chemother 2022 Sep; 77(10): 2658-2666.

Harimanana A, Rakotondrasoa A, Rivoarilala LO, Criscuolo A, Opatowski L, Rakotomanana EFN, Herindrainy P, Collard JM, Crucitti T, Huynh BT, Neonatal acquisition of extended-spectrum beta-lactamase-producing Enterobacteriaceae in the community of a low-income country (NeoLIC): protocol for a household cohort study in Moramanga, Madagascar., BMJ Open 2022 Sep; 12(9): e061463.

Lindstedt K, Buczek D, Pedersen T, Hjerde E, Raffelsberger N, Suzuki Y, Brisse S, Holt K, Samuelsen Ø, Sundsfjord A, , Detection of Klebsiella pneumoniae human gut carriage: a comparison of culture, qPCR, and whole metagenomic sequencing methods., Gut Microbes ; 14(1): 2118500.

Dereeper A, Gruel G, Pot M, Couvin D, Barbier E, Bastian S, Bambou JC, Gelu-Simeon M, Ferdinand S, Guyomard-Rabenirina S, Passet V, Martino F, Piveteau P, Reynaud Y, Rodrigues C, Roger PM, Roy X, Talarmin A, Tressieres B, Valette M, Brisse S, Breurec S, , Limited Transmission of Klebsiella pneumoniae among Humans, Animals, and the Environment in a Caribbean Island, Guadeloupe (French West Indies)., Microbiol Spectr 2022 Sep; (): e0124222.

Marjenberg Z, Wright C, Pooley N, Cheung KW, Shimakawa Y, Vargas-Zambrano JC, Vidor E, , Hepatitis B surface antigen prevalence and the rates of mother-to-child transmission of hepatitis B virus after the introduction of infant vaccination programs in South East Asia and Western Pacific regions: a systematic review., Int J Infect Dis 2022 Nov; 124(): 65-75.

Williams DJ, Grimont PAD, Cazares A, Grimont F, Ageron E, Pettigrew KA, Cazares D, Njamkepo E, Weill FX, Heinz E, Holden MTG, Thomson NR, Coulthurst SJ, The genus Serratia revisited by genomics., Nat Commun 2022 Sep; 13(1): 5195.

Bastard J, Nhung NT, Hien VB, Kiet BT, Temime L, Opatowski L, Carrique-Mas J, Choisy M, , Modelling the impact of antimicrobial use and external introductions on commensal E. coli colistin resistance in small-scale chicken farms of the Mekong delta of Vietnam., Transbound Emerg Dis 2022 Sep; 69(5): e2185-e2194.

Lazarini F, Lannuzel A, Cabié A, Michel V, Madec Y, Chaumont H, Calmont I, Favrat M, Montagutelli X, Roze E, Lledo PM, Olfactory outcomes in Zika virus-associated Guillain-Barré syndrome., Eur J Neurol 2022 Sep; 29(9): 2823-2831.

Bruel T, Pinaud L, Tondeur L, Planas D, Staropoli I, Porrot F, Guivel-Benhassine F, Attia M, Pelleau S, Woudenberg T, Duru C, Koffi AD, Castelain S, Fernandes-Pellerin S, Jolly N, De Facci LP, Roux E, Ungeheuer MN, Van Der Werf S, White M, Schwartz O, Fontanet A, Neutralising antibody responses to SARS-CoV-2 omicron among elderly nursing home residents following a booster dose of BNT162b2 vaccine: A community-based, prospective, longitudinal cohort study., EClinicalMedicine 2022 Sep; 51(): 101576.

Falay D, Hardy L, Tanzito J, Lunguya O, Bonebe E, Peeters M, Mattheus W, Van Geet C, Verheyen E, Akaibe D, Katuala P, Ngbonda D, Weill FX, Pardos de la Gandara M, Jacobs J, Urban rats as carriers of invasive Salmonella Typhimurium sequence type 313, Kisangani, Democratic Republic of Congo., PLoS Negl Trop Dis 2022 Sep; 16(9): e0010740.

De Sousa Violante M, Podeur G, Michel V, Guillier L, Radomski N, Lailler R, Le Hello S, Weill FX, Mistou MY, Mallet L, A retrospective and regional approach assessing the genomic diversity of Salmonella Dublin., NAR Genom Bioinform 2022 Sep; 4(3): lqac047.

Ten Bosch Q, Andrianaivoarimanana V, Ramasindrazana B, Mikaty G, Rakotonanahary RJ, Nikolay B, Rahajandraibe S, Feher M, Grassin Q, Paireau J, Rahelinirina S, Randremanana R, Rakotoarimanana F, Melocco M, Rasolofo V, Pizarro-Cerda J, Le Guern AS, Bertherat E, Ratsitorahina M, Spiegel A, Baril L, Rajerison M, Cauchemez S, , Analytical framework to evaluate and optimize the use of imperfect diagnostics to inform outbreak response: Application to the 2017 plague epidemic in Madagascar., PLoS Biol 2022 Aug; 20(8): e3001736.

Vonaesch P, Winkel M, Kapel N, Nestoret A, Barbot-Trystram L, Pontoizeau C, Barouki R, Rakotondrainipiana M, Kandou K, Andriamanantena Z, Andrianonimiadana L, Habib A, Rodriguez-Pozo A, Hasan M, Vigan-Womas I, Collard JM, Gody JC, Djorie S, Sansonetti PJ, Randremanana RV, On Behalf Of The Afribiota Investigators, Putative Biomarkers of Environmental Enteric Disease Fail to Correlate in a Cross-Sectional Study in Two Study Sites in Sub-Saharan Africa., Nutrients 2022 Aug; 14(16): .

Im YR, Jagdish R, Leith D, Kim JU, Yoshida K, Majid A, Ge Y, Ndow G, Shimakawa Y, Lemoine M, , Prevalence of occult hepatitis B virus infection in adults: a systematic review and meta-analysis., Lancet Gastroenterol Hepatol 2022 Oct; 7(10): 932-942.

Henriot P, Castry M, Luong Nguyen LB, Shimakawa Y, Jean K, Temime L, , Meta-analysis: risk of hepatitis C virus infection associated with hospital-based invasive procedures., Aliment Pharmacol Ther 2022 Aug; 56(4): 558-569.

Christophe Batéjat, Quentin Grassin, Maxence Feher, Damien Hoinard, Jessica Vanhomwegen, Jean-Claude Manuguerra, India Leclercq, Heat inactivation of monkeypox virus, Journal of Biosafety and Biosecurity 4 (2022) 121-123.

Randrianarisoa MM, Rakotondrainipiana M, Randriamparany R, Andriantsalama PV, Randrianarijaona A, Habib A, Robinson A, Raharimalala L, Hunald FA, Etienne A, Collard JM, Randrianirina F, Barouki R, Pontoizeau C, Nestoret A, Kapel N, Sansonetti P, Vonaesch P, Randremanana RV, Factors associated with anaemia among preschool- age children in underprivileged neighbourhoods in Antananarivo, Madagascar., BMC Public Health 2022 Jul; 22(1): 1320.

Voznica J, Zhukova A, Boskova V, Saulnier E, Lemoine F, Moslonka-Lefebvre M, Gascuel O, , Deep learning from phylogenies to uncover the epidemiological dynamics of outbreaks., Nat Commun 2022 Jul; 13(1): 3896.

Bridel S, Bouchez V, Brancotte B, Hauck S, Armatys N, Landier A, Mühle E, Guillot S, Toubiana J, Maiden MCJ, Jolley KA, Brisse S, , A comprehensive resource for Bordetella genomic epidemiology and biodiversity studies., Nat Commun 2022 Jul; 13(1): 3807.

Shirreff G, Zahar JR, Cauchemez S, Temime L, Opatowski L, Measuring Basic Reproduction Number to Assess Effects of Nonpharmaceutical Interventions on Nosocomial SARS-CoV-2 Transmission., Emerg Infect Dis 2022 Jul; 28(7): 1345-1354.

Dussault JM, Paz-Bailey G, Sánchez-González L, Adams LE, Rodríguez DM, Ryff KR, Major CG, Lorenzi O, Rivera-Amill V, Arbovirus risk perception as a predictor of mosquito-bite preventive behaviors in Ponce, Puerto Rico., PLoS Negl Trop Dis 2022 Jul; 16(7): e0010653.

Delvallez G, Badell E, Cheng S, Meng S, Tong V, Norman J, Toubiana J, Vandelannoote K, Bañuls AL, Hide M, Brisse S, , Non-toxigenic Corynebacterium diphtheriae in hallux ulceration., J Infect Dev Ctries 2022 Jun; 16(6): 1118-1121.

Taha S, Taha MK, Deghmane AE, , Impact of mandatory vaccination against serogroup C meningococci in targeted and non-targeted populations in France., NPJ Vaccines 2022 Jun; 7(1): 73.

Vandenbogaert M, Kwasiborski A, Gonofio E, Descorps-Declère S, Selekon B, Nkili Meyong AA, Ouilibona RS, Gessain A, Manuguerra JC, Caro V, Nakoune E, Berthet N, Nanopore sequencing of a monkeypox virus strain isolated from a pustular lesion in the Central African Republic., Sci Rep 2022 Jun; 12(1): 10768.

Hennart M, Guglielmini J, Bridel S, Maiden MCJ, Jolley KA, Criscuolo A, Brisse S, A dual barcoding approach to bacterial strain nomenclature: Genomic taxonomy of Klebsiella pneumoniae strains, Mol Biol Evol. 2022 Jun; msac135.

Shimakawa Y, Ndow G, Kaneko A, Aoyagi K, Lemoine M, Tanaka Y, , , Rapid Point-of-Care Test for Hepatitis B Core-Related Antigen to Diagnose High Viral Load in Resource-Limited Settings., Clin Gastroenterol Hepatol 2022 Jun; (): .

Mastriani E, Bienes KM, Wong G, Berthet N, , PIMGAVir and Vir-MinION: Two Viral Metagenomic Pipelines for Complete Baseline Analysis of 2nd and 3rd Generation Data., Viruses 2022 Jun; 14(6): .

Matczak S, Levy C, Fortas C, Cohen JF, Béchet S, Aït El Belghiti F, Guillot S, Trombert-Paolantoni S, Jacomo V, Savitch Y, Paireau J, Brisse S, Guiso N, Lévy-Bruhl D, Cohen R, Toubiana J, , Association between the COVID-19 pandemic and pertussis derived from multiple nationwide data sources, France, 2013 to 2020., Euro Surveill 2022 Jun; 27(25): .

Bonneault M, Poletto C, Flauder M, Guillemot D, Delarocque-Astagneau E, Thiébaut ACM, Opatowski L, , Contact patterns and HPV-genotype interactions yield heterogeneous HPV-vaccine impacts depending on sexual behaviors: An individual-based model., Epidemics 2022 Jun; 39(): 100584.

Dussault JM, Zimba C, Malava J, Akello H, Stockton MA, Udedi M, Gaynes BN, Hosseinipour MC, Pence BW, Masiye J, “Thandi should feel embarrassed”: describing the validity and reliability of a tool to measure depression-related stigma among patients with depressive symptoms in Malawi., Soc Psychiatry Psychiatr Epidemiol 2022 Jun; 57(6): 1211-1220.

Benamrouche N, Belkader C, Njamkepo E, Zemam SS, Sadat S, Saighi K, Boutabba DT, Mechouet F, Benhadj-Slimani R, Zmit FZ, Rauzier J, Kias F, Zouagui S, Ruckly C, Yousfi M, Zertal A, Chouikrat R, Quilici ML, Weill FX, Outbreak of Imported Seventh Pandemic Vibrio cholerae O1 El Tor, Algeria, 2018., Emerg Infect Dis 2022 Jun; 28(6): 1241-1245.

Pandolfi F, Guillemot D, Watier L, Brun-Buisson C, Trends in bacterial sepsis incidence and mortality in France between 2015 and 2019 based on National Health Data System (Système National des données de Santé (SNDS)): a retrospective observational study., BMJ Open 2022 05; 12(5): e058205.

Blanquart F, Hozé N, Cowling BJ, Débarre F, Cauchemez S, , Selection for infectivity profiles in slow and fast epidemics, and the rise of SARS-CoV-2 variants., Elife 2022 May; 11(): .

Vezina B, Judd LM, McDougall FK, Boardman WSJ, Power ML, Hawkey J, Brisse S, Monk JM, Holt KE, Wyres KL, , Transmission of Klebsiella strains and plasmids within and between grey-headed flying fox colonies., Environ Microbiol 2022 May; (): .

Laforêt F, Antoine C, Blasdel Reuter B, Detilleux J, Pirnay JP, Brisse S, Fall A, Duprez JN, Delcenserie V, Thiry D, , In Vitro and In Vivo Assessments of Two Newly Isolated Bacteriophages against an ST13 Urinary Tract Infection Klebsiella pneumoniae., Viruses 2022 05; 14(5): .

Bara W, Brun-Buisson C, Coignard B, Watier L, Outpatient Antibiotic Prescriptions in France: Patients and Providers Characteristics and Impact of the COVID-19 Pandemic., Antibiotics (Basel) 2022 May; 11(5): .

Rouard C, Njamkepo E, Quilici ML, Weill FX, Contribution of microbial genomics to cholera epidemiology., C R Biol 2022 May; 345(1): 37-56.

Paireau J, Andronico A, Hozé N, Layan M, Crépey P, Roumagnac A, Lavielle M, Boëlle PY, Cauchemez S, , An ensemble model based on early predictors to forecast COVID-19 health care demand in France., Proc Natl Acad Sci U S A 2022 May; 119(18): e2103302119.

Collard JM, Andrianonimiadana L, Habib A, Rakotondrainipiana M, Andriantsalama P, Randriamparany R, Rabenandrasana MAN, Weill FX, Sauvonnet N, Randremanana RV, Guillemot V, Vonaesch P, Sansonetti PJ, High prevalence of small intestine bacteria overgrowth and asymptomatic carriage of enteric pathogens in stunted children in Antananarivo, Madagascar., PLoS Negl Trop Dis 2022 May; 16(5): e0009849.

Rakotondrasoa A, Andrianonimiadana LM, Rahajandraibe S, Razafimahatratra S, Andrianaivoarimanana V, Rahelinirina S, Crucitti T, Brisse S, Jeannoda V, Rajerison M, Collard JM, Characterization of Klebsiella pneumoniae isolated from patients suspected of pulmonary or bubonic plague during the Madagascar epidemic in 2017., Sci Rep 2022 Apr; 12(1): 6871.

Lefrancq N, Bouchez V, Fernandes N, Barkoff AM, Bosch T, Dalby T, Åkerlund T, Darenberg J, Fabianova K, Vestrheim DF, Fry NK, González-López JJ, Gullsby K, Habington A, He Q, Litt D, Martini H, Piérard D, Stefanelli P, Stegger M, Zavadilova J, Armatys N, Landier A, Guillot S, Hong SL, Lemey P, Parkhill J, Toubiana J, Cauchemez S, Salje H, Brisse S, , Global spatial dynamics and vaccine-induced fitness changes of Bordetella pertussis., Sci Transl Med 2022 Apr; 14(642): eabn3253.

Guingané AN, Kaboré R, Shimakawa Y, Somé EN, Kania D, Pisoni A, Nagot N, King R, Sombié R, Meda N, Van de Perre P, Tuaillon E, , Screening for Hepatitis B in partners and children of women positive for surface antigen, Burkina Faso., Bull World Health Organ 2022 Apr; 100(4): 256-267.

Debin M, Launay T, Rossignol L, Ait El Belghiti F, Brisse S, Guillot S, Guiso N, Levy-Bruhl D, Merdrignac L, Toubiana J, Blanchon T, Hanslik T, , Pertussis surveillance results from a French general practitioner network, France, 2017 to 2020., Euro Surveill 2022 Apr; 27(17): .

Moirangthem S, Olivier C, Gagneux-Brunon A, Péllissier G, Abiteboul D, Bonmarin I, Rouveix E, Botelho-Nevers E, Mueller JE, Social conformism and confidence in systems as additional psychological antecedents of vaccination: a survey to explain intention for COVID-19 vaccination among healthcare and welfare sector workers, France, December 2020 to February 2021., Euro Surveill 2022 Apr; 27(17): .

Colosi E, Bassignana G, Contreras DA, Poirier C, Boëlle PY, Cauchemez S, Yazdanpanah Y, Lina B, Fontanet A, Barrat A, Colizza V, , Screening and vaccination against COVID-19 to minimise school closure: a modelling study., Lancet Infect Dis 2022 Apr; (): .

Larkin L, Pardos de la Gandara M, Hoban A, Pulford C, Jourdan-Da Silva N, de Valk H, Browning L, Falkenhorst G, Simon S, Lachmann R, Dryselius R, Karamehmedovic N, Börjesson S, van Cauteren D, Laisnez V, Mattheus W, Pijnacker R, van den Beld M, Mossong J, Ragimbeau C, Vergison A, Thorstensen Brandal L, Lange H, Garvey P, Nielsen CS, Herrera León S, Varela C, Chattaway M, Weill FX, Brown D, McKeown P, Investigation of an international outbreak of multidrug-resistant monophasic Salmonella Typhimurium associated with chocolate products, EU/EEA and United Kingdom, February to April 2022., Euro Surveill 2022 Apr; 27(15): .

Palma F, Mangone I, Janowicz A, Moura A, Chiaverini A, Torresi M, Garofolo G, Criscuolo A, Brisse S, Di Pasquale A, Cammà C, Radomski N, , In vitro and in silico parameters for precise cgMLST typing of Listeria monocytogenes., BMC Genomics 2022 Mar; 23(1): 235.

Rambliere L, Kermorvant-Duchemin E, de Lauzanne A, Collard JM, Herindrainy P, Vray M, Garin B, Zo AZ, Rasoanaivo F, Rakotoarimanana Feno Manitra J, Raheliarivao TB, Diouf JN, Ngo V, Lach S, Long P, Borand L, Sok T, Abdou AY, Padget M, Madec Y, Guillemot D, Delarocque-Astagneau E, Huynh BT, , Excess risk of subsequent infection in hospitalized children from a community cohort study in Cambodia and Madagascar., Int J Epidemiol 2022 Oct; 51(5): 1421-1431.

Bocquier A, Michel M, Giraudeau B, Bonnay S, Gagneux-Brunon A, Gauchet A, Gilberg S, Le Duc-Banaszuk AS, Mueller JE, Chevreul K, Thilly N, Impact of a school-based and primary care-based multicomponent intervention on HPV vaccination coverage among French adolescents: a cluster randomised controlled trial protocol (the PrevHPV study)., BMJ Open 2022 Mar; 12(3): e057943.

Tsang TK, Perera RAPM, Fang VJ, Wong JY, Shiu EY, So HC, Ip DKM, Malik Peiris JS, Leung GM, Cowling BJ, Cauchemez S, , Reconstructing antibody dynamics to estimate the risk of influenza virus infection., Nat Commun 2022 Mar; 13(1): 1557.

Cherchame E, Guillier L, Lailler R, Vignaud ML, Jourdan-Da Silva N, Le Hello S, Weill FX, Cadel-Six S, Salmonella enterica subsp. enterica Welikade: guideline for phylogenetic analysis of serovars rarely involved in foodborne outbreaks., BMC Genomics 2022 Mar; 23(1): 217.

Brisset J, Angendu Baki K, Watier L, Kinkpé E, Bailly J, Ayédadjou L, Alao MJ, Dossou-Dagba I, Bertin GI, Cot M, Boumédiène F, Ajzenberg D, Aubouy A, Houzé S, Faucher JF, Non-traumatic coma in young children in Benin: are viral and bacterial infections gaining ground on cerebral malaria?, Infect Dis Poverty 2022 Mar; 11(1): 29.

Hawkey J, Vezina B, Monk JM, Judd LM, Harshegyi T, López-Fernández S, Rodrigues C, Brisse S, Holt KE, Wyres KL, , A curated collection of Klebsiella metabolic models reveals variable substrate usage and gene essentiality., Genome Res 2022 Mar; (): .

Opatowski L, Temime L, , Contributions of modelling for the control of COVID-19 nosocomial transmission., Anaesth Crit Care Pain Med 2022 Apr; 41(2): 101054.

Chyderiotis S, Sicsic J, Thilly N, , Mueller JE, Vaccine eagerness: A new framework to analyse preferences in single profile discrete choice experiments. Application to HPV vaccination decisions among French adolescents., SSM Popul Health 2022 Mar; 17(): 101058.

Shahin K, Zhang L, Mehraban MH, Collard JM, Hedayatkhah A, Mansoorianfar M, Soleimani-Delfan A, Wang R, Clinical and experimental bacteriophage studies: Recommendations for possible approaches for standing against SARS-CoV-2., Microb Pathog 2022 Mar; 164(): 105442.

Garcia-Fierro R, Drapeau A, Dazas M, Saras E, Rodrigues C, Brisse S, Madec JY, Haenni M, , Comparative phylogenomics of ESBL-, AmpC- and carbapenemase-producing Klebsiella pneumoniae originating from companion animals and humans., J Antimicrob Chemother 2022 Feb; (): .

Scholz AH, Freitag J, Lyal CHC, Sara R, Cepeda ML, Cancio I, Sett S, Hufton AL, Abebaw Y, Bansal K, Benbouza H, Boga HI, Brisse S, Bruford MW, Clissold H, Cochrane G, Coddington JA, Deletoille AC, García-Cardona F, Hamer M, Hurtado-Ortiz R, Miano DW, Nicholson D, Oliveira G, Bravo CO, Rohden F, Seberg O, Segelbacher G, Shouche Y, Sierra A, Karsch-Mizrachi I, da Silva J, Hautea DM, da Silva M, Suzuki M, Tesfaye K, Tiambo CK, Tolley KA, Varshney R, Zambrano MM, Overmann J, , Multilateral benefit-sharing from digital sequence information will support both science and biodiversity conservation., Nat Commun 2022 02; 13(1): 1086.

Rodrigues C, Hauser K, Cahill N, Ligowska-Marzęta M, Centorotola G, Cornacchia A, Garcia Fierro R, Haenni M, Nielsen EM, Piveteau P, Barbier E, Morris D, Pomilio F, Brisse S, , High Prevalence of Klebsiella pneumoniae in European Food Products: a Multicentric Study Comparing Culture and Molecular Detection Methods., Microbiol Spectr 2022 02; 10(1): e0237621.

Shimakawa Y, Veillon P, Birguel J, Pivert A, Sauvage V, Guillou-Guillemette HL, Roger S, Njouom R, Ducancelle A, Amta P, Huraux JM, Adoukara JP, Lunel-Fabiani F, , Residual risk of mother-to-child transmission of hepatitis B virus infection despite timely birth-dose vaccination in Cameroon (ANRS 12303): a single-centre, longitudinal observational study., Lancet Glob Health 2022 Apr; 10(4): e521-e529.

Bridel S, Watts SC, Judd LM, Harshegyi T, Passet V, Rodrigues C, Holt KE, Brisse S, , Klebsiella MALDI TypeR: a web-based tool for Klebsiella identification based on MALDI-TOF mass spectrometry., Res Microbiol ; 172(4-5): 103835.

Abbara S, Guillemot D, Brun-Buisson C, Watier L, From Pathophysiological Hypotheses to Case-Control Study Design: Resistance from Antibiotic Exposure in Community-Onset Infections., Antibiotics (Basel) 2022 Feb; 11(2): .

Grant R, Charmet T, Schaeffer L, Galmiche S, Madec Y, Von Platen C, Chény O, Omar F, David C, Rogoff A, Paireau J, Cauchemez S, Carrat F, Septfons A, Levy-Bruhl D, Mailles A, Fontanet A, , Impact of SARS-CoV-2 Delta variant on incubation, transmission settings and vaccine effectiveness: Results from a nationwide case-control study in France., Lancet Reg Health Eur 2022 Feb; 13(): 100278.

Galmiche S, Luong Nguyen LB, Tartour E, de Lamballerie X, Wittkop L, Loubet P, Launay O, , Immunological and clinical efficacy of COVID-19 vaccines in immunocompromised populations: a systematic review., Clin Microbiol Infect 2022 Feb; 28(2): 163-177.

Galmiche S, Fernandes-Pellerin S, Ungeheuer MN, Schwartz O, Attia M, Hoen B, High negative predictive value of RT-PCR in patients with high likelihood of SARS-CoV-2 infection., Infect Dis Now 2022 Feb; 52(1): 52-53.

Paireau J, Mailles A, Eisenhauer C, de Laval F, Delon F, Bosetti P, Salje H, Pontiès V, Cauchemez S, , Early chains of transmission of COVID-19 in France, January to March 2020., Euro Surveill 2022 02; 27(6): .

Diarra M, Kebir A, Talla C, Barry A, Faye J, Louati D, Opatowski L, Diop M, , White LJ, Loucoubar C, Miled SB, , Non-pharmaceutical interventions and COVID-19 vaccination strategies in Senegal: a modelling study., BMJ Glob Health 2022 02; 7(2): .

Mikaty G, Matheus S, Donoso Mantke O, McCulloch E, Zeichhardt H, Manuguerra JC, Evaluation of the diagnostic capacities for emerging arboviral diseases in the international network MediLabSecure from 2014 to 2018 – Importance of external quality assessments., J Infect Public Health 2022 Feb; 15(2): 203-209.

Yassine I, Lefèvre S, Hansen EE, Ruckly C, Carle I, Lejay-Collin M, Fabre L, Rafei R, Clermont D, de la Gandara MP, Dabboussi F, Thomson NR, Weill FX, , Population structure analysis and laboratory monitoring of Shigella by core-genome multilocus sequence typing., Nat Commun 2022 Jan; 13(1): 551.

Bosetti P, Tran Kiem C, Andronico A, Colizza V, Yazdanpanah Y, Fontanet A, Benamouzig D, Cauchemez S, , Epidemiology and control of SARS-CoV-2 epidemics in partially vaccinated populations: a modeling study applied to France., BMC Med 2022 01; 20(1): 33.

Duong CH, Mueller JE, Tubert-Bitter P, Escolano S, Estimation of mid-and long-term benefits and hypothetical risk of Guillain-Barre syndrome after human papillomavirus vaccination among boys in France: A simulation study., Vaccine 2022 Jan; 40(2): 359-363.

Mauti S, Voupawoe G, Bonas S, Kamara V, Bourhy H, Gourlaouen M, De Benedictis P, Zinsstag J, Dacheux L, , Complete Genome Sequences of Five Rabies Virus Strains Obtained from Domestic Carnivores in Liberia., Microbiol Resour Announc 2022 Jan; 11(1): e0104721.

Pyana PP, Mbilo C, Lannoy J, Bonas S, Luntadila B, Kabongo JB, Ngayi Lukusa I, Ntunuanga L, Zinsstag J, Mauti S, Dacheux L, , Nearly Complete Genome Sequences of Eight Rabies Virus Strains Obtained from Domestic Carnivores in the Democratic Republic of the Congo., Microbiol Resour Announc 2022 Jan; 11(1): e0110921.

Razafimahatratra SL, Menezes A, Wesolowski A, Rafetrarivony L, Cauchemez S, Razafindratsimandresy R, Harimanana A, Crucitti T, Collard JM, Metcalf CJE, , Leveraging serology to titrate immunisation programme functionality for diphtheria in Madagascar., Epidemiol Infect 2022 Jan; 150(): e39.

Smith DRM, Duval A, Zahar JR, , Opatowski L, Temime L, Rapid antigen testing as a reactive response to surges in nosocomial SARS-CoV-2 outbreak risk., Nat Commun 2022 Jan; 13(1): 236.

Bosetti P, Tran Kiem C, Andronico A, Paireau J, Levy-Bruhl D, Alter L, Fontanet A, Cauchemez S, , Impact of booster vaccination on the control of COVID-19 Delta wave in the context of waning immunity: application to France in the winter 2021/22., Euro Surveill 2022 01; 27(1): .

Rodrigues C, Desai S, Passet V, Gajjar D, Brisse S, , Genomic evolution of the globally disseminated multidrug-resistant Klebsiella pneumoniae clonal group 147., Microb Genom 2022 01; 8(1): .

Bonner KE, Ssekyanzi H, Sicsic J, Mueller JE, Toomey T, Ulrich AK, Horvath KJ, Neaton JD, Banura C, Basta NE, What drives willingness to receive a new vaccine that prevents an emerging infectious disease? A discrete choice experiment among university students in Uganda., PLoS One 2022 ; 17(5): e0268063.

Oliu-Barton M, Pradelski BSR, Algan Y, Baker MG, Binagwaho A, Dore GJ, El-Mohandes A, Fontanet A, Peichl A, Priesemann V, Wolff GB, Yamey G, Lazarus JV, , Elimination versus mitigation of SARS-CoV-2 in the presence of effective vaccines., Lancet Glob Health 2022 01; 10(1): e142-e147.

Zo Andriamanantena, Fanirisoa Randrianarisaona, Maheninasy Rakotondrainipiana, Prisca Andriantsalama, Ravaka Randriamparany, Rindra Randremanana, Frédérique Randrianirina, Sophie Novault, Darragh Duffy, François Huetz, Milena Hasan, Matthieu Schoenhals, Philippe Sansonetti, Pascale Vonaesch, Inès Vigan‑womas, The Afribiota Investigators, Changes in Systemic Regulatory T Cells, Effector T Cells, and Monocyte Populations Associated With Early-Life Stunting, Frontiers in Immunology, 2022, 13, pp.864084. ⟨10.3389/fimmu.2022.864084⟩.

Abbara S, Guillemot D, El Oualydy S, Kos M, Poret C, Breant S, Brun-Buisson C, Watier L, Antimicrobial Resistance and Mortality in Hospitalized Patients with Bacteremia in the Greater Paris Area from 2016 to 2019., Clin Epidemiol 2022 ; 14(): 1547-1560.

Vincent JP, Nyamasege C, Wang S, Madec Y, Shimakawa Y, Prevalence of hepatitis B, C, and D virus infection in Haiti: A systematic review and meta-analysis., Front Public Health 2022 ; 10(): 1099571.

Landrum KR, Pence BW, Gaynes BN, Dussault JM, Hosseinipour MC, Kulisewa K, Malava JK, Masiye J, Akello H, Udedi M, Zimba CC, The cross-sectional association of stressful life events with depression severity among patients with hypertension and diabetes in Malawi., PLoS One 2022 ; 17(12): e0279619.

Périères L, Diallo A, Marcellin F, Nishimwe ML, Ba EH, Coste M, Lo G, Halfon P, Touré Kane C, Maradan G, Carrieri P, Diouf A, Shimakawa Y, Sokhna C, Boyer S, , , Hepatitis B in Senegal: A Successful Infant Vaccination Program but Urgent Need to Scale Up Screening and Treatment (ANRS 12356 AmBASS survey)., Hepatol Commun 2022 May; 6(5): 1005-1015.

Kim S, Larrous F, Varet H, Legendre R, Feige L, Dumas G, Matsas R, Kouroupi G, Grailhe R, Bourhy H, , Early Transcriptional Changes in Rabies Virus-Infected Neurons and Their Impact on Neuronal Functions., Front Microbiol 2021 ; 12(): 730892.

Bizot E, Cointe A, Bidet P, Mariani-Kurkdjian P, Hobson CA, Courroux C, Liguori S, Bridier-Nahmias A, Magnan M, Merimèche M, Caméléna F, Berçot B, Weill FX, Lefèvre S, Bonacorsi S, Birgy A, , Azithromycin resistance in Shiga-toxin Producing Escherichia coli in France between 2004 and 2020 and detection of mef(C)-mph(G) genes., Antimicrob Agents Chemother 2021 Dec; (): AAC0194921.

Moura A, Lefrancq N, Wirth T, Leclercq A, Borges V, Gilpin B, Dallman TJ, Frey J, Franz E, Nielsen EM, Thomas J, Pightling A, Howden BP, Tarr CL, Gerner-Smidt P, Cauchemez S, Salje H, Brisse S, Lecuit M, , , Emergence and global spread of Listeria monocytogenes main clinical clonal complex., Sci Adv 2021 Dec; 7(49): eabj9805.

Frantz PN, Barinov A, Ruffié C, Combredet C, Najburg V, de Melo GD, Larrous F, Kergoat L, Teeravechyan S, Jongkaewwattana A, Billon-Denis E, Tournier JN, Prot M, Levillayer L, Conquet L, Montagutelli X, Tichit M, Hardy D, Fernandes P, Strick-Marchand H, Di Santo J, Simon-Lorière E, Bourhy H, Tangy F, A live measles-vectored COVID-19 vaccine induces strong immunity and protection from SARS-CoV-2 challenge in mice and hamsters., Nat Commun 2021 Nov; 12(1): 6277.

Bosetti P, Huynh BT, Abdou AY, Sanchez M, Eisenhauer C, Courtejoie N, Accardo J, Salje H, Guillemot D, Moslonka-Lefebvre M, Boëlle PY, Béraud G, Cauchemez S, Opatowski L, , Lockdown impact on age-specific contact patterns and behaviours, France, April 2020., Euro Surveill 2021 12; 26(48): .

Tran Kiem C, Bosetti P, Paireau J, Crépey P, Salje H, Lefrancq N, Fontanet A, Benamouzig D, Boëlle PY, Desenclos JC, Opatowski L, Cauchemez S, , SARS-CoV-2 transmission across age groups in France and implications for control., Nat Commun 2021 11; 12(1): 6895.

Lemoine M, Ndow G, Shimakawa Y, , Improving disease knowledge is critical to eliminate hepatitis B., J Viral Hepat 2022 Mar; 29(3): 231-232.

Levi LI, Barbut F, Chopin D, Rondeau P, Lalande V, Jolivet S, Badell E, Brisse S, Lacombe K, Surgers L, , Cutaneous diphtheria: 3 case-reports to discuss determinants of re-emergence in resource-rich settings., Emerg Microbes Infect 2021 Nov; (): 1-7.

Hozé N, Diarra I, Sangaré AK, Pastorino B, Pezzi L, Kouriba B, Sagara I, Dabo A, Djimdé A, Thera MA, Doumbo OK, de Lamballerie X, Cauchemez S, , Model-based assessment of Chikungunya and O’nyong-nyong virus circulation in Mali in a serological cross-reactivity context., Nat Commun 2021 Nov; 12(1): 6735.

Pelleau S, Woudenberg T, Rosado J, Donnadieu F, Garcia L, Obadia T, Gardais S, Elgharbawy Y, Velay A, Gonzalez M, Nizou JY, Khelil N, Zannis K, Cockram C, Merkling SH, Meola A, Kerneis S, Terrier B, de Seze J, Planas D, Schwartz O, Dejardin F, Petres S, von Platen C, Pellerin SF, Arowas L, de Facci LP, Duffy D, Cheallaigh CN, Dunne J, Conlon N, Townsend L, Duong V, Auerswald H, Pinaud L, Tondeur L, Backovic M, Hoen B, Fontanet A, Mueller I, Fafi-Kremer S, Bruel T, White M, Kinetics of the Severe Acute Respiratory Syndrome Coronavirus 2 Antibody Response and Serological Estimation of Time Since Infection., J Infect Dis 2021 Nov; 224(9): 1489-1499.

Rollin G, Rossi B, Brisse S, Decré D, Leflon-Guibout V, Bert F, Hoffmann I, Decousser JW, Fantin B, Lefort A, , Spontaneous and post-surgical/traumatic Klebsiella pneumoniae meningitis: two distinct clinic-microbiological entities., Int J Infect Dis 2021 Nov; (): .

Lefèvre B, Tondeur L, Madec Y, Grant R, Lina B, van der Werf S, Rabaud C, Fontanet A, , Beta SARS-CoV-2 variant and BNT162b2 vaccine effectiveness in long-term care facilities in France., Lancet Healthy Longev 2021 Nov; 2(11): e685-e687.

Smith AM, Weill FX, Njamkepo E, Ngomane HM, Ramalwa N, Sekwadi P, Thomas J, Emergence of Vibrio cholerae O1 Sequence Type 75, South Africa, 2018-2020., Emerg Infect Dis 2021 Nov; 27(11): 2927-2931.

Luo DS, Zhou ZJ, Ge XY, Bourhy H, Shi ZL, Grandadam M, Dacheux L, , Genome Characterization of Bird-Related Rhabdoviruses Circulating in Africa., Viruses 2021 Oct; 13(11): .

Bonneton M, Huynh BT, Seck A, Bercion R, Sarr FD, Delarocque-Astagneau E, Vray M, , Bacterial vaginosis and other infections in pregnant women in Senegal., BMC Infect Dis 2021 Oct; 21(1): 1090.

Paireau J, Guillot S, Aït El Belghiti F, Matczak S, Trombert-Paolantoni S, Jacomo V, Taha MK, Salje H, Brisse S, Lévy-Bruhl D, Cauchemez S, Toubiana J, , Effect of change in vaccine schedule on pertussis epidemiology in France: a modelling and serological study., Lancet Infect Dis 2021 Oct; (): .

Mikaty G, Coullon H, Fiette L, Pizarro-Cerdá J, Carniel E, The invasive pathogen Yersinia pestis disrupts host blood vasculature to spread and provoke hemorrhages., PLoS Negl Trop Dis 2021 Oct; 15(10): e0009832.

Díaz Luévano C, Sicsic J, Pellissier G, Chyderiotis S, Arwidson P, Olivier C, Gagneux-Brunon A, Botelho-Nevers E, Bouvet E, Mueller J, , Quantifying healthcare and welfare sector workers’ preferences around COVID-19 vaccination: a cross-sectional, single-profile discrete-choice experiment in France., BMJ Open 2021 10; 11(10): e055148.

Yonezawa A, Grant R, Shimakawa Y, , Including the voice of people living with viral hepatitis: lessons learned from Japan to accelerate progress towards global hepatitis elimination., Trop Med Health 2021 Oct; 49(1): 79.

Bizot E, Cointe A, Smadja N, Sergentet D, Lefèvre S, Weill FX, Levy C, Cohen R, Mariani-Kurkdjian P, Bonacorsi S, , Improved molecular diagnosis and culture of the emerging heteropathotype enterohemorrhagic Escherichia coli O80:H2 using its non-melibiose-fermenting and antibiotic-resistance properties., J Clin Microbiol 2021 Sep; (): JCM0153021.

Pallandre L, Lautraite A, Feuvrier C, Pozet F, Dacheux L, Bigarré L, , A New Lineage of Perch Rhabdovirus Associated with Mortalities of Farmed Perch., Pathogens 2021 Sep; 10(10): .

Cointe A, Bizot E, Delannoy S, Fach P, Bidet P, Birgy A, Weill FX, Lefèvre S, Mariani-Kurkdjian P, Bonacorsi S, , Emergence of New ST301 Shiga Toxin-Producing Escherichia coli Clones Harboring Extra-Intestinal Virulence Traits in Europe., Toxins (Basel) 2021 Sep; 13(10): .

Grzelak L, Velay A, Madec Y, Gallais F, Staropoli I, Schmidt-Mutter C, Wendling MJ, Meyer N, Planchais C, Rey D, Mouquet H, Reix N, Glady L, Hansmann Y, Bruel T, De Sèze J, Fontanet A, Gonzalez M, Schwartz O, Fafi-Kremer S, , Sex Differences in the Evolution of Neutralizing Antibodies to Severe Acute Respiratory Syndrome Coronavirus 2., J Infect Dis 2021 09; 224(6): 983-988.

Guglielmini J, Hennart M, Badell E, Toubiana J, Criscuolo A, Brisse S, , Genomic epidemiology and strain taxonomy of Corynebacterium diphtheriae., J Clin Microbiol 2021 Sep; (): JCM0158121.

Smith DR, Temime L, Opatowski L, , Microbiome-pathogen interactions drive epidemiological dynamics of antibiotic resistance: A modeling study applied to nosocomial pathogen control., Elife 2021 09; 10(): .

Kovacevic A, Eggo RM, Baguelin M, Domenech de Cellès M, Opatowski L, The Impact of Cocirculating Pathogens on Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2)/Coronavirus Disease 2019 Surveillance: How Concurrent Epidemics May Introduce Bias and Decrease the Observed SARS-CoV-2 Percentage Positivity., J Infect Dis 2022 Jan; 225(2): 199-207.

Parize P, Poujol P, Conan PL, Kuhmel L, Lucet C, Jidar K, Gominet M, Bourhy H, Ficko C, , COVID-19-related travel restrictions temporarily reduced the demand for rabies post-exposure prophylaxis in France., J Travel Med 2021 Sep; (): .

Charmet T, Schaeffer L, Grant R, Galmiche S, Chény O, Von Platen C, Maurizot A, Rogoff A, Omar F, David C, Septfons A, Cauchemez S, Gaymard A, Lina B, Lefrancois LH, Enouf V, van der Werf S, Mailles A, Levy-Bruhl D, Carrat F, Fontanet A, , Impact of original, B.1.1.7, and B.1.351/P.1 SARS-CoV-2 lineages on vaccine effectiveness of two doses of COVID-19 mRNA vaccines: Results from a nationwide case-control study in France., Lancet Reg Health Eur 2021 Sep; 8(): 100171.

Smith N, Goncalves P, Charbit B, Grzelak L, Beretta M, Planchais C, Bruel T, Rouilly V, Bondet V, Hadjadj J, Yatim N, Pere H, Merkling SH, Ghozlane A, Kernéis S, Rieux-Laucat F, Terrier B, Schwartz O, Mouquet H, Duffy D, Di Santo JP, , Distinct systemic and mucosal immune responses during acute SARS-CoV-2 infection., Nat Immunol 2021 Sep; 22(11):1428-1439.

Huynh BT, Kermorvant-Duchemin E, Chheang R, Randrianirina F, Seck A, Hariniaina Ratsima E, Andrianirina ZZ, Diouf JB, Abdou AY, Goyet S, Ngo V, Lach S, Pring L, Sok T, Padget M, Sarr FD, Borand L, Garin B, Collard JM, Herindrainy P, de Lauzanne A, Vray M, Delarocque-Astagneau E, Guillemot D, , , Severe bacterial neonatal infections in Madagascar, Senegal, and Cambodia: A multicentric community-based cohort study., PLoS Med 2021 Sep; 18(9): e1003681.

Bouchez V, Guillot S, Landier A, Armatys N, Matczak S, , Toubiana J, Brisse S, Evolution of Bordetella pertussis over a 23-year period in France, 1996 to 2018., Euro Surveill 2021 Sep; 26(37): .

Marchio A, Batejat C, Vanhomwegen J, Feher M, Grassin Q, Chazal M, Raulin O, Farges-Berth A, Reibel F, Estève V, Dejean A, Jouvenet N, Manuguerra JC, Pineau P, , ddPCR increases detection of SARS-CoV-2 RNA in patients with low viral loads., Arch Virol 2021 Sep; 166(9): 2529-2540.

Jung YJ, Huynh BT, Seck A, Bercion R, Sarr FD, Herindrainy P, Diouf JB, Andrianirina ZZ, Firon A, Trieu-Cuot P, Goyet S, Collard JM, Delaroque-Astagneau E, Guillemot D, Vray M, , , Prevalence and Factors Associated with Maternal Group B Streptococcus Colonization in Madagascar and Senegal., Am J Trop Med Hyg 2021 Aug; (): .

Gallais F, Gantner P, Bruel T, Velay A, Planas D, Wendling MJ, Bayer S, Solis M, Laugel E, Reix N, Schneider A, Glady L, Panaget B, Collongues N, Partisani M, Lessinger JM, Fontanet A, Rey D, Hansmann Y, Kling-Pillitteri L, Schwartz O, De Sèze J, Meyer N, Gonzalez M, Schmidt-Mutter C, Fafi-Kremer S, , Evolution of antibody responses up to 13 months after SARS-CoV-2 infection and risk of reinfection., EBioMedicine 2021 Sep; 71(): 103561.

Tahir D, Asri B, Meyer LN, Evans A, Mather T, Blagburn B, Straubinger RK, Choumet V, Jongejan F, Varloud M, , Vectra 3D (dinotefuran, pyriproxyfen and permethrin) prevents acquisition of Borrelia burgdorferi sensu stricto by Ixodes ricinus and Ixodes scapularis ticks in an ex vivo feeding model., Parasit Vectors 2021 Aug; 14(1): 416.

Kraemer MUG, Hill V, Ruis C, Dellicour S, Bajaj S, McCrone JT, Baele G, Parag KV, Battle AL, Gutierrez B, Jackson B, Colquhoun R, O'Toole Á, Klein B, Vespignani A, , Volz E, Faria NR, Aanensen DM, Loman NJ, du Plessis L, Cauchemez S, Rambaut A, Scarpino SV, Pybus OG, , Spatiotemporal invasion dynamics of SARS-CoV-2 lineage B.1.1.7 emergence., Science 2021 08; 373(6557): 889-895.

Manirakiza A, Tondeur L, Yvette Batoumbou Ketta M, Sepou A, Serdouma E, Gondje S, Géraud Banthas Bata G, Boulay A, Methode Moyen J, Sakanga O, Le-Fouler L, Kazanji M, Briand V, Pierre Lombart J, Vray M, , Cotrimoxazole versus sulfadoxine-pyrimethamine for intermittent preventive treatment of malaria in HIV-infected pregnant women in Bangui, Central African Republic: a Pragmatic Randomized Controlled Trial., Trop Med Int Health 2021 Aug; (): .

Pascale Vonaesch, Serge Ghislain Djorie, Kaleb Jephté Estimé Kandou, Maheninasy Rakotondrainipiana, Laura Schaeffer, Prisca Vega Andriatsalama, Ravaka Randriamparany, Bolmbaye Privat Gondje, Synthia Nigatoloum, Sonia Sandrine Vondo, Aurélie Etienne, Annick Robinson, Francis Allen Hunald, Lisette Raharimalala, Tamara Giles-Vernick, Laura Tondeur, Frédérique Randrianirina, Alexandra Bastaraud, Jean-Chrysostome Gody, Philippe Jean Sansonetti, Rindra Vatosoa Randremanana, The Afribiota Investigators, Factors Associated with Stunted Growth in Children Under Five Years in Antananarivo, Madagascar and Bangui, Central African Republic., Maternal and Child Health Journal, 2021, 25 (10), pp.1626-1637. ⟨10.1007/s10995-021-03201-8⟩.

Cauchemez S, Kiem CT, , Managing COVID-19 importation risks in a heterogeneous world., Lancet Public Health 2021 Aug; (): .

de Melo GD, Lazarini F, Larrous F, Feige L, Kornobis E, Levallois S, Marchio A, Kergoat L, Hardy D, Cokelaer T, Pineau P, Lecuit M, Lledo PM, Changeux JP, Bourhy H, , Attenuation of clinical and immunological outcomes during SARS-CoV-2 infection by ivermectin., EMBO Mol Med 2021 Aug; 13(8): e14122.

Dray N, Mancini L, Binshtok U, Cheysson F, Supatto W, Mahou P, Bedu S, Ortica S, Than-Trong E, Krecsmarik M, Herbert S, Masson JB, Tinevez JY, Lang G, Beaurepaire E, Sprinzak D, Bally-Cuif L, Dynamic spatiotemporal coordination of neural stem cell fate decisions occurs through local feedback in the adult vertebrate brain., Cell Stem Cell 2021 Aug; 28(8): 1457-1472.e12.

Demont C, Petrica N, Bardoulat I, Duret S, Watier L, Chosidow A, Lorrot M, Kieffer A, Lemaitre M, Economic and disease burden of RSV-associated hospitalizations in young children in France, from 2010 through 2018, BMC Infect Dis 2021 Aug; 21(1): 730.

Galmiche S, Charmet T, Schaeffer L, Paireau J, Grant R, Chény O, Von Platen C, Maurizot A, Blanc C, Dinis A, Martin S, Omar F, David C, Septfons A, Cauchemez S, Carrat F, Mailles A, Levy-Bruhl D, Fontanet A, , Exposures associated with SARS-CoV-2 infection in France: A nationwide online case-control study., Lancet Reg Health Eur 2021 Aug; 7(): 100148.

Tran Kiem C, Massonnaud CR, Levy-Bruhl D, Poletto C, Colizza V, Bosetti P, Fontanet A, Gabet A, Olié V, Zanetti L, Boëlle PY, Crépey P, Cauchemez S, , A modelling study investigating short and medium-term challenges for COVID-19 vaccination: From prioritisation to the relaxation of measures., EClinicalMedicine 2021 Aug; 38(): 101001.

Salje H, Alera MT, Chua MN, Hunsawong T, Ellison D, Srikiatkhachorn A, Jarman RG, Gromowski GD, Rodriguez-Barraquer I, Cauchemez S, Cummings DAT, Macareo L, Yoon IK, Fernandez S, Rothman AL, , Evaluation of the extended efficacy of the Dengvaxia vaccine against symptomatic and subclinical dengue infection., Nat Med 2021 Aug; 27(8): 1395-1400.

Mauras S, Cohen-Addad V, Duboc G, Dupré la Tour M, Frasca P, Mathieu C, Opatowski L, Viennot L, , Mitigating COVID-19 outbreaks in workplaces and schools by hybrid telecommuting., PLoS Comput Biol 2021 08; 17(8): e1009264.

Badell E, Alharazi A, Criscuolo A, Almoayed KAA, Lefrancq N, Bouchez V, Guglielmini J, Hennart M, Carmi-Leroy A, Zidane N, Pascal-Perrigault M, Lebreton M, Martini H, Salje H, Toubiana J, Dureab F, Dhabaan G, Brisse S, Ongoing diphtheria outbreak in Yemen: a cross-sectional and genomic epidemiology study., Lancet Microbe 2021 Aug; 2(8): e386-e396.

Cauchemez S, Bosetti P, Kiem CT, Mouro V, Consoli A, Fontanet A, , Education and mental health: good reasons to vaccinate children., Lancet 2021 07; 398(10298): 387.

Gosset A, Diallo MY, Betsem E, Schaeffer L, Meda N, Vray M, Sombie R, Shimakawa Y, Boyer S, , Cost-effectiveness of adding a birth dose of hepatitis B vaccine in the Dafra district of the Hauts-Bassins Region in Burkina Faso (NéoVac Study)., Vaccine 2021 Jul; 39(33): 4659-4670.

Manriquez V, Nivoit P, Urbina T, Echenique-Rivera H, Melican K, Fernandez-Gerlinger MP, Flamant P, Schmitt T, Bruneval P, Obino D, Duménil G, , Colonization of dermal arterioles by Neisseria meningitidis provides a safe haven from neutrophils., Nat Commun 2021 07; 12(1): 4547.

Woudenberg T, Pelleau S, Anna F, Attia M, Donnadieu F, Gravet A, Lohmann C, Seraphin H, Guiheneuf R, Delamare C, Stefic K, Marlet J, Brochot E, Castelain S, Augereau O, Sibilia J, Dubos F, Meddour D, Guen CG, Coste-Burel M, Imbert-Marcille BM, Chauvire-Drouard A, Schweitzer C, Gatin A, Lomazzi S, Joulié A, Haas H, Cantais A, Bertholon F, Chinazzo-Vigouroux MF, Abdallah MS, Arowas L, Charneau P, Hoen B, Demeret C, Werf SV, Fontanet A, White M, , Humoral immunity to SARS-CoV-2 and seasonal coronaviruses in children and adults in north-eastern France., EBioMedicine 2021 Aug; 70(): 103495.

Fares W, Chouikha A, Ghedira K, Gdoura M, Rezig D, Boubaker SH, Dhifallah IB, Touzi H, Hammami W, Meddeb Z, Sadraoui A, Hogga N, Abouda I, Kwasiborski A, Hourdel V, Mikaty G, Caro V, Manuguerra JC, Alaya NB, Triki H, Whole genome sequencing and phylogenetic analysis of six SARS-CoV-2 strains isolated during COVID-19 pandemic in Tunisia, North Africa., BMC Genomics 2021 Jul; 22(1): 540.

Andrianaivoarimanana V, Wagner DM, Birdsell DN, Nikolay B, Rakotoarimanana F, Randriantseheno LN, Vogler AJ, Sahl JW, Hall CM, Somprasong N, Cauchemez S, Schweizer HP, Razafimandimby H, Rogier C, Rajerison M, , Transmission of antimicrobial resistant Yersinia pestis during a pneumonic plague outbreak., Clin Infect Dis 2021 Jul; (): .

Raffelsberger N, Hetland MAK, Svendsen K, Småbrekke L, Löhr IH, Andreassen LLE, Brisse S, Holt KE, Sundsfjord A, Samuelsen Ø, Gravningen K, , Gastrointestinal carriage of Klebsiella pneumoniae in a general adult population: a cross-sectional study of risk factors and bacterial genomic diversity., Gut Microbes ; 13(1): 1939599.

Bailly S, Rousset D, Fritzell C, Hozé N, Ben Achour S, Berthelot L, Enfissi A, Vanhomwegen J, Salje H, Fernandes-Pellerin S, Saout M, Lavergne A, Manuguerra JC, Carod JF, Djossou F, Cauchemez S, Flamand C, , Spatial Distribution and Burden of Emerging Arboviruses in French Guiana., Viruses 2021 07; 13(7): .

Hooban B, Fitzhenry K, Cahill N, Joyce A, O' Connor L, Bray JE, Brisse S, Passet V, Abbas Syed R, Cormican M, Morris D, , A Point Prevalence Survey of Antibiotic Resistance in the Irish Environment, 2018-2019., Environ Int 2021 07; 152(): 106466.

Tran Kiem C, Andronico A, Bosetti P, Paireau J, Alter L, Boëlle PY, Fontanet A, Lévy-Bruhl D, Cauchemez S, , Benefits and risks associated with different uses of the COVID-19 vaccine Vaxzevria: a modelling study, France, May to September 2021., Euro Surveill 2021 07; 26(26): .

Ramblière L, Guillemot D, Delarocque-Astagneau E, Huynh BT, , Impact of mass and systematic antibiotic administration on antibiotic resistance in low- and middle-income countries? A systematic review., Int J Antimicrob Agents 2021 Jul; 58(1): 106364.

Chyderiotis S, Sicsic J, Raude J, Bonmarin I, Jeanleboeuf F, Le Duc Banaszuk AS, Gauchet A, Bruel S, Michel M, Giraudeau B, Thilly N, Mueller JE, Optimising HPV vaccination communication to adolescents: A discrete choice experiment., Vaccine 2021 Jun; 39(29): 3916-3925.

Biedrzycka M, Urbanowicz P, Guzek A, Brisse S, Gniadkowski M, Izdebski R, , Dissemination of Klebsiella pneumoniae ST147 NDM-1 in Poland, 2015-19., J Antimicrob Chemother 2021 Jun; (): .

Ndow G, Cessay A, Cohen D, Shimakawa Y, Gore ML, Tamba S, Ghosh S, Sanneh B, Baldeh I, Njie R, D'Alessandro U, Mendy M, Thursz M, Chemin I, Lemoine M, , Prevalence and Clinical Significance of Occult Hepatitis B Infection in The Gambia, West Africa., J Infect Dis 2022 Sep; 226(5): 862-870.

Berthet N, Descorps-Declère S, Besombes C, Curaudeau M, Nkili Meyong AA, Selekon B, Labouba I, Gonofio EC, Ouilibona RS, Simo Tchetgna HD, Feher M, Fontanet A, Kazanji M, Manuguerra JC, Hassanin A, Gessain A, Nakoune E, Genomic history of human monkey pox infections in the Central African Republic between 2001 and 2018., Sci Rep 2021 Jun; 11(1): 13085.

Landier J, Paireau J, Rebaudet S, Legendre E, Lehot L, Fontanet A, Cauchemez S, Gaudart J, , Cold and dry winter conditions are associated with greater SARS-CoV-2 transmission at regional level in western countries during the first epidemic wave., Sci Rep 2021 06; 11(1): 12756.

Moutchia J, Njouom R, Rumpler E, Besombes C, Texier G, Tejiokem M, Crépey P, Fontanet A, Shimakawa Y, , Maternal Age at First Childbirth and Geographical Variation in Hepatitis B Virus Prevalence in Cameroon: Important Role of Mother-to-Child Transmission., Clin Infect Dis 2022 Mar; 74(5): 836-845.

Opatowski M, Brun-Buisson C, Touat M, Salomon J, Guillemot D, Tuppin P, Watier L, Antibiotic prescriptions and risk factors for antimicrobial resistance in patients hospitalized with urinary tract infection: a matched case-control study using the French health insurance database (SNDS), BMC Infect Dis 2021 Jun; 21(1): 571.

de Melo GD, Lazarini F, Levallois S, Hautefort C, Michel V, Larrous F, Verillaud B, Aparicio C, Wagner S, Gheusi G, Kergoat L, Kornobis E, Donati F, Cokelaer T, Hervochon R, Madec Y, Roze E, Salmon D, Bourhy H, Lecuit M, Lledo PM, , COVID-19-related anosmia is associated with viral persistence and inflammation in human olfactory epithelium and brain infection in hamsters., Sci Transl Med 2021 Jun; 13(596): .

Cheysson F, Brun-Buisson C, Opatowski L, Le Fouler L, Caserio-Schönemann C, Pontais I, Guillemot D, Watier L, Outpatient antibiotic use attributable to viral acute lower respiratory tract infections during the cold season in France, 2010-2017, Int J Antimicrob Agents 2021 Jun; 57(6): 106339.

Smith DRM, Opatowski L, , COVID-19 containment measures and incidence of invasive bacterial disease., Lancet Digit Health 2021 Jun; 3(6): e331-e332.

Bastard J, Haenni M, Gay E, Glaser P, Madec JY, Temime L, Opatowski L, , Drivers of ESBL-producing Escherichia coli dynamics in calf fattening farms: A modelling study., One Health 2021 Jun; 12(): 100238.

Tran Kiem C, Crépey P, Bosetti P, Levy Bruhl D, Yazdanpanah Y, Salje H, Boëlle PY, Cauchemez S, , Lockdown as a last resort option in case of COVID-19 epidemic rebound: a modelling study., Euro Surveill 2021 06; 26(22): .

Lefrancq N, Paireau J, Hozé N, Courtejoie N, Yazdanpanah Y, Bouadma L, Boëlle PY, Chereau F, Salje H, Cauchemez S, , Evolution of outcomes for patients hospitalised during the first 9 months of the SARS-CoV-2 pandemic in France: A retrospective national surveillance data analysis., Lancet Reg Health Eur 2021 Jun; 5(): 100087.

Tall H, Adam P, Tiendrebeogo ASE, Vincent JP, Schaeffer L, von Platen C, Fernandes-Pellerin S, Sawadogo F, Bokoum A, Bouda G, Ouattara S, Ouédraogo I, Herrant M, Boucheron P, Sawadogo A, Betsem E, Essoh A, Kabore L, Ouattara A, Méda N, Hien H, Gosset A, Giles-Vernick T, Boyer S, Kania D, Vray M, Shimakawa Y, Impact of Introducing Hepatitis B Birth Dose Vaccines into the Infant Immunization Program in Burkina Faso: Study Protocol for a Stepped Wedge Cluster Randomized Trial (NéoVac Study)., Vaccines (Basel) 2021 Jun; 9(6): .

Travier L, Alonso M, Andronico A, Hafner L, Disson O, Lledo PM, Cauchemez S, Lecuit M, Neonatal susceptibility to meningitis results from the immaturity of epithelial barriers and gut microbiota., Cell Rep 2021 Jun; 35(13): 109319.

Grant R, Nguyen TTT, Dao MH, Pham HTT, Piorkowski G, Pham TDT, Cao TM, Huynh LTK, Nguyen QH, Vien LDK, Lemoine F, Zhukova A, Hoang DTN, Nguyen HT, Nguyen NT, Le LB, Ngo MNQ, Tran TC, Le NNT, Nguyen MN, Pham HT, Hoang TTD, Dang TV, Vu AT, Nguyen QNT, de Lamballerie X, Pham QD, Luong QC, Fontanet A, , Maternal and neonatal outcomes related to Zika virus in pregnant women in Southern Vietnam: An epidemiological and virological prospective analysis., Lancet Reg Health West Pac 2021 Jun; 11(): 100163.

Lapidus N, Paireau J, Levy-Bruhl D, de Lamballerie X, Severi G, Touvier M, Zins M, Cauchemez S, Carrat F, , , Do not neglect SARS-CoV-2 hospitalization and fatality risks in the middle-aged adult population., Infect Dis Now 2021 Jun; 51(4): 380-382.

Batéjat C, Grassin Q, Manuguerra JC, Leclercq I, , Heat inactivation of the severe acute respiratory syndrome coronavirus 2., J Biosaf Biosecur 2021 Jun; 3(1): 1-3.

Dufloo J, Grzelak L, Staropoli I, Madec Y, Tondeur L, Anna F, Pelleau S, Wiedemann A, Planchais C, Buchrieser J, Robinot R, Ungeheuer MN, Mouquet H, Charneau P, White M, Lévy Y, Hoen B, Fontanet A, Schwartz O, Bruel T, Asymptomatic and symptomatic SARS-CoV-2 infections elicit polyfunctional antibodies., Cell Rep Med 2021 May; 2(5): 100275.

Gosset A, Nishimwe ML, Diallo MY, Deroo L, Diallo A, Ba EH, Carrieri PM, Sokhna C, Vray M, Shimakawa Y, Boyer S, , The Costs of Introducing the Hepatitis B Birth Dose Vaccine into the National Immunization Programme in Senegal (NéoVac Study)., Vaccines (Basel) 2021 May; 9(5): .

Berbers G, van Gageldonk P, Kassteele JV, Wiedermann U, Desombere I, Dalby T, Toubiana J, Tsiodras S, Ferencz IP, Mullan K, Griskevicius A, Kolupajeva T, Vestrheim DF, Palminha P, Popovici O, Wehlin L, Kastrin T, Maďarová L, Campbell H, Ködmön C, Bacci S, Barkoff AM, He Q, , , Circulation of pertussis and poor protection against diphtheria among middle-aged adults in 18 European countries., Nat Commun 2021 05; 12(1): 2871.

Regnault B, Evrard B, Plu I, Dacheux L, Troadec E, Cozette P, Chrétien D, Duchesne M, Jean-Michel V, Jamet A, Leruez M, Pérot P, Bourhy H, Eloit M, Seilhean D, , First case of lethal encephalitis in Western Europe due to European bat lyssavirus type 1., Clin Infect Dis 2021 May; (): .

Simo Tchetgna H, Descorps-Declère S, Selekon B, Kwasiborski A, Vandenbogaert M, Manuguerra JC, Gessain A, Caro V, Nakouné E, Berthet N, Molecular characterization of a new highly divergent Mobala related arenavirus isolated from Praomys sp. rodents., Sci Rep 2021 May; 11(1): 10188.

Conde E, Bertrand R, Balbino B, Bonnefoy J, Stackowicz J, Caillot N, Colaone F, Hamdi S, Houmadi R, Loste A, Kamphuis JBJ, Huetz F, Guilleminault L, Gaudenzio N, Mougel A, Hardy D, Snouwaert JN, Koller BH, Serra V, Bruhns P, Grouard-Vogel G, Reber LL, , Dual vaccination against IL-4 and IL-13 protects against chronic allergic asthma in mice., Nat Commun 2021 May; 12(1): 2574.

Hawkey J, Paranagama K, Baker KS, Bengtsson RJ, Weill FX, Thomson NR, Baker S, Cerdeira L, Iqbal Z, Hunt M, Ingle DJ, Dallman TJ, Jenkins C, Williamson DA, Holt KE, Global population structure and genotyping framework for genomic surveillance of the major dysentery pathogen, Shigella sonnei., Nat Commun 2021 May; 12(1): 2684.

Yusuke Shimakawa, Laura Vernoux, Audrey Gabassi, Séverine Mercier-Delarue, Jeanne Perpétue Vincent, François Simon, Sarah Maylin, Analytical validation of hepatitis B core‐related antigen (HBcrAg) using dried blood spots (DBS), Journal of Viral Hepatitis, 2021, 28 (5), pp.837-843. ⟨10.1111/jvh.13489⟩.

Layan M, Dellicour S, Baele G, Cauchemez S, Bourhy H, , Mathematical modelling and phylodynamics for the study of dog rabies dynamics and control: A scoping review., PLoS Negl Trop Dis 2021 May; 15(5): e0009449.

Collard JM, Sansonetti P, Papon N, , Taurine Makes Our Microbiota Stronger., Trends Endocrinol Metab 2021 May; 32(5): 259-261.

Rezelj VV, Carrau L, Merwaiss F, Levi LI, Erazo D, Tran QD, Henrion-Lacritick A, Gausson V, Suzuki Y, Shengjuler D, Meyer B, Vallet T, Weger-Lucarelli J, Bernhauerová V, Titievsky A, Sharov V, Pietropaoli S, Diaz-Salinas MA, Legros V, Pardigon N, Barba-Spaeth G, Brodsky L, Saleh MC, Vignuzzi M, , Defective viral genomes as therapeutic interfering particles against flavivirus infection in mammalian and mosquito hosts., Nat Commun 2021 Apr; 12(1): 2290.

Fontanet A, Tondeur L, Grant R, Temmam S, Madec Y, Bigot T, Grzelak L, Cailleau I, Besombes C, Ungeheuer MN, Renaudat C, Perlaza BL, Arowas L, Jolly N, Pellerin SF, Kuhmel L, Staropoli I, Huon C, Chen KY, Crescenzo-Chaigne B, Munier S, Charneau P, Demeret C, Bruel T, Eloit M, Schwartz O, Hoen B, SARS-CoV-2 infection in schools in a northern French city: a retrospective serological cohort study in an area of high transmission, France, January to April 2020., Euro Surveill 2021 Apr; 26(15): .

Hozé N, Paireau J, Lapidus N, Tran Kiem C, Salje H, Severi G, Touvier M, Zins M, de Lamballerie X, Lévy-Bruhl D, Carrat F, Cauchemez S, , Monitoring the proportion of the population infected by SARS-CoV-2 using age-stratified hospitalisation and serological data: a modelling study., Lancet Public Health 2021 Apr; (): .

Vanhomwegen J, Kwasiborski A, Diop A, Boizeau L, Hoinard D, Vray M, Bercion R, Ndiaye B, Dublineau A, Michiyuki S, Manuguerra JC, Sauvage V, Candotti D, Seck A, Laperche S, Shimakawa Y, , Development and clinical validation of loop-mediated isothermal amplification (LAMP) assay to diagnose high HBV DNA levels in resource-limited settings., Clin Microbiol Infect 2021 Dec; 27(12): 1858.e9-1858.e15.

Sermet-Gaudelus I, Temmam S, Huon C, Behillil S, Gajdos V, Bigot T, Lurier T, Chrétien D, Backovic M, Delaunay-Moisan A, Donati F, Albert M, Foucaud E, Mesplées B, Benoist G, Faye A, Duval-Arnould M, Cretolle C, Charbit M, Aubart M, Auriau J, Lorrot M, Kariyawasam D, Fertitta L, Orliaguet G, Pigneur B, Bader-Meunier B, Briand C, Enouf V, Toubiana J, Guilleminot T, van der Werf S, Leruez-Ville M, Eloit M, Prior infection by seasonal coronaviruses, as assessed by serology, does not prevent SARS-CoV-2 infection and disease in children, France, April to June 2020., Euro Surveill 2021 Apr; 26(13): .

Grant R, Dub T, Andrianou X, Nohynek H, Wilder-Smith A, Pezzotti P, Fontanet A, , SARS-CoV-2 population-based seroprevalence studies in Europe: a scoping review., BMJ Open 2021 04; 11(4): e045425.

Kim JU, Ingiliz P, Shimakawa Y, Lemoine M, , Improving care of migrants is key for viral hepatitis elimination in Europe., Bull World Health Organ 2021 Apr; 99(4): 280-286.

Azimdine Habib, Lova Andrianonimiadana, Maheninasy Rakotondrainipiana, Prisca Andriantsalama, Ravaka Randriamparany, Rindra Vatosoa Randremanana, Rado Rakotoarison, Inès Vigan‑womas, Armand Rafalimanantsoa, Pascale Vonaesch, Philippe J. Sansonetti, Jean-Marc Collard, The Afribiota Investigators, High prevalence of intestinal parasite infestations among stunted and control children aged 2 to 5 years old in two neighborhoods of Antananarivo, Madagascar, PLoS Neglected Tropical Diseases, 2021, 15 (4), pp.e0009333. ⟨10.1371/journal.pntd.0009333⟩.

Parize P, Sommé J, Schaeffer L, Ribadeau-Dumas F, Benabdelkader S, Durand A, Tarantola A, Cailhol J, Goesch J, Kergoat L, Le Guern AS, Mousel ML, Dacheux L, Consigny PH, Fontanet A, Francuz B, Bourhy H, , Systematic Booster after Rabies Pre-Exposure Prophylaxis to Alleviate Rabies Antibody Monitoring in Individuals at Risk of Occupational Exposure., Vaccines (Basel) 2021 Mar; 9(4): .

Post G, Howell J, Sow A, Ndow G, Chemin I, Lo G, Cessay A, Cohen D, Njie R, Toure S, Diop M, Sombie R, Nana J, Leroy V, Lacombe K, Bojang L, Tacke F, Toure-Kane C, Ka M, Mendy M, Mboup S, Thursz M, Shimakawa Y, Ingiliz P, Lemoine M, , Clinical utility of quantifying hepatitis B surface antigen in African patients with chronic hepatitis B., J Viral Hepat 2021 Jul; 28(7): 1003-1010.

Salje H, Wesolowski A, Brown TS, Kiang MV, Berry IM, Lefrancq N, Fernandez S, Jarman RG, Ruchusatsawat K, Iamsirithaworn S, Vandepitte WP, Suntarattiwong P, Read JM, Klungthong C, Thaisomboonsuk B, Engø-Monsen K, Buckee C, Cauchemez S, Cummings DAT, , Reconstructing unseen transmission events to infer dengue dynamics from viral sequences., Nat Commun 2021 03; 12(1): 1810.

Shen S, Xiao W, Zhang L, Lu J, Funk A, He J, Tu S, Yu J, Yang L, Fontanet A, Bao W, Cheng KK, Qiu X, , Prevalence of congenital microcephaly and its risk factors in an area at risk of Zika outbreaks., BMC Pregnancy Childbirth 2021 Mar; 21(1): 214.

Feghali R, Merhi G, Kwasiborski A, Hourdel V, Ghosn N, Tokajian S, Genomic characterization and phylogenetic analysis of the first SARS-CoV-2 variants introduced in Lebanon., PeerJ 2021 ; 9(): e11015.

Fontanet A, Autran B, Lina B, Kieny MP, Karim SSA, Sridhar D, , SARS-CoV-2 variants and ending the COVID-19 pandemic., Lancet 2021 03; 397(10278): 952-954.

Andronico A, Tran Kiem C, Paireau J, Succo T, Bosetti P, Lefrancq N, Nacher M, Djossou F, Sanna A, Flamand C, Salje H, Rousseau C, Cauchemez S, , Evaluating the impact of curfews and other measures on SARS-CoV-2 transmission in French Guiana., Nat Commun 2021 03; 12(1): 1634.

Denis F, Fontanet A, Le Douarin YM, Le Goff F, Jeanneau S, Lescure FX, , A Self-Assessment Web-Based App to Assess Trends of the COVID-19 Pandemic in France: Observational Study., J Med Internet Res 2021 03; 23(3): e26182.

Touat M, Brun-Buisson C, Opatowski M, Salomon J, Guillemot D, Tuppin P, de Lagasnerie G, Watier L, Costs and Outcomes of 1-year post-discharge care trajectories of patients admitted with infection due to antibiotic-resistant bacteria, J Infect 2021 03; 82(3): 339-345.

Pulford CV, Perez-Sepulveda BM, Canals R, Bevington JA, Bengtsson RJ, Wenner N, Rodwell EV, Kumwenda B, Zhu X, Bennett RJ, Stenhouse GE, Malaka De Silva P, Webster HJ, Bengoechea JA, Dumigan A, Tran-Dien A, Prakash R, Banda HC, Alufandika L, Mautanga MP, Bowers-Barnard A, Beliavskaia AY, Predeus AV, Rowe WPM, Darby AC, Hall N, Weill FX, Gordon MA, Feasey NA, Baker KS, Hinton JCD, , Stepwise evolution of Salmonella Typhimurium ST313 causing bloodstream infection in Africa., Nat Microbiol 2021 Mar; 6(3): 327-338.

Funk AL, Hoen B, Vingdassalom I, Ryan C, Kadhel P, Schepers K, Gaete S, Tressières B, Fontanet A, , Reassessment of the risk of birth defects due to Zika virus in Guadeloupe, 2016., PLoS Negl Trop Dis 2021 Mar; 15(3): e0009048.

Gaymard A, Bosetti P, Feri A, Destras G, Enouf V, Andronico A, Burrel S, Behillil S, Sauvage C, Bal A, Morfin F, Van Der Werf S, Josset L, , , Blanquart F, Coignard B, Cauchemez S, Lina B, , Early assessment of diffusion and possible expansion of SARS-CoV-2 Lineage 20I/501Y.V1 (B.1.1.7, variant of concern 202012/01) in France, January to March 2021., Euro Surveill 2021 03; 26(9): .

Wei X, Yang J, Gao L, Wang L, Liao Q, Qiu Q, Luo K, Yu S, Zhou Y, Liu F, Chen Q, Zhang J, Dai B, Yang H, Zhou J, Xing W, Chen X, He M, Ren L, Guo J, Luo L, Wu P, Chen Z, van Doorn HR, Cauchemez S, Cowling BJ, Yu H, , The transfer and decay of maternal antibodies against enterovirus A71, and dynamics of antibodies due to later natural infections in Chinese infants: a longitudinal, paired mother-neonate cohort study., Lancet Infect Dis 2021 03; 21(3): 418-426.

Vo Quang E, Shimakawa Y, Nahon P, , Epidemiological projections of viral-induced hepatocellular carcinoma in the perspective of WHO global hepatitis elimination., Liver Int 2021 May; 41(5): 915-927.

Huot N, Rascle P, Petitdemange C, Contreras V, Stürzel CM, Baquero E, Harper JL, Passaes C, Legendre R, Varet H, Madec Y, Sauermann U, Stahl-Hennig C, Nattermann J, Saez-Cirion A, Le Grand R, Keith Reeves R, Paiardini M, Kirchhoff F, Jacquelin B, Müller-Trutwin M, , SIV-induced terminally differentiated adaptive NK cells in lymph nodes associated with enhanced MHC-E restricted activity., Nat Commun 2021 02; 12(1): 1282.

Fontanet A, Grant R, Greve-Isdahl M, Sridhar D, , Covid-19: Keeping schools as safe as possible., BMJ 2021 02; 372(): n524.

Labadie T, Grassin Q, Batéjat C, Manuguerra JC, Leclercq I, , Monitoring Influenza Virus Survival Outside the Host Using Real-Time Cell Analysis., J Vis Exp 2021 02; (168): .

Jamet A, Guglielmini J, Brancotte B, Coureuil M, Euphrasie D, Meyer J, Roux J, Barnier JP, Bille E, Ferroni A, Magny JF, Bôle-Feysot C, Charbit A, Nassif X, Brisse S, , High-Resolution Typing of Staphylococcus epidermidis Based on Core Genome Multilocus Sequence Typing To Investigate the Hospital Spread of Multidrug-Resistant Clones., J Clin Microbiol 2021 Feb; 59(3): .

Batisti Biffignandi G, Gibbon MJ, Corbella M, Thorpe HA, Merla C, Castelli M, Kallonen T, Pegrum K, Brisse S, Corander J, Marone P, Feil EJ, Sassera D, , Genome of Superficieibacter maynardsmithii, a novel, antibiotic susceptible representative of Enterobacteriaceae., G3 (Bethesda) 2021 Feb; 11(2): .

Gildas Boris H, Idrissa D, Marie Louise S, Cheikh T, Aliou BM, Fatoumata DS, Rebecca G, Raymond B, Diamilatou T, Vincent R, Oumar F, Abdoulaye S, Muriel V, , Identification of Pathogens Potentially Associated with Non-Malarial Fever in Children: A Pilot Study in Peri-Urban Dakar, Senegal., Am J Trop Med Hyg 2021 Feb; (): .

Borie R, Caro V, Nunes H, Kambouchner M, Cazes A, Antoine M, Crestani B, Leroy K, Copie-Bergman C, Kwasiborski A, Hennequin C, Vandenbogaert M, Hourdel V, Cadranel J, No evidence for a pathogen associated with pulmonary MALT lymphoma: a metagenomics investigation., Infect Agent Cancer 2021 Feb; 16(1): 10.

O'Driscoll M, Ribeiro Dos Santos G, Wang L, Cummings DAT, Azman AS, Paireau J, Fontanet A, Cauchemez S, Salje H, , Age-specific mortality and immunity patterns of SARS-CoV-2., Nature 2021 02; 590(7844): 140-145.

Rosado J, Pelleau S, Cockram C, Merkling SH, Nekkab N, Demeret C, Meola A, Kerneis S, Terrier B, Fafi-Kremer S, de Seze J, Bruel T, Dejardin F, Petres S, Longley R, Fontanet A, Backovic M, Mueller I, White MT, , Multiplex assays for the identification of serological signatures of SARS-CoV-2 infection: an antibody-based diagnostic and machine learning study., Lancet Microbe 2021 Feb; 2(2): e60-e69.

Mafirakureva N, Lim AG, Khalid GG, Aslam K, Campbell L, Zahid H, Van den Bergh R, Falq G, Fortas C, Wailly Y, Auat R, Donchuk D, Loarec A, Coast J, Vickerman P, Walker JG, , Cost-effectiveness of screening and treatment using direct-acting antivirals for chronic Hepatitis C virus in a primary care setting in Karachi, Pakistan., J Viral Hepat 2021 02; 28(2): 268-278.

Jean K, Raad H, Gaythorpe KAM, Hamlet A, Mueller JE, Hogan D, Mengistu T, Whitaker HJ, Garske T, Hocine MN, Assessing the impact of preventive mass vaccination campaigns on yellow fever outbreaks in Africa: A population-level self-controlled case series study., PLoS Med 2021 Feb; 18(2): e1003523.

Raphaël Borie, Valérie Caro, Hilario Nunes, Marianne Kambouchner, Aurélie Cazes, Martine Antoine, Bruno Crestani, Karen Leroy, Christiane Copie-Bergman, Aurelia Kwasiborski, Christophe Hennequin, Mathias Vandenbogaert, Véronique Hourdel, Jacques Cadranel, No evidence for a pathogen associated with pulmonary MALT lymphoma: a metagenomics investigation, Infectious Agents and Cancer, 2021, 16 (1), ⟨10.1186/s13027-021-00351-w⟩.

Godinot LD, Sicsic J, Lachatre M, Bouvet E, Abiteboul D, Rouveix E, Pellissier G, Raude J, Mueller JE, , Quantifying preferences around vaccination against frequent, mild disease with risk for vulnerable persons: A discrete choice experiment among French hospital health care workers., Vaccine 2021 01; 39(5): 805-814.

Heyerdahl LW, Vray M, Leger V, Le Fouler L, Antouly J, Troit V, Giles-Vernick T, , Evaluating the motivation of Red Cross Health volunteers in the COVID-19 pandemic: a mixed-methods study protocol., BMJ Open 2021 01; 11(1): e042579.

Grant R, Fléchelles O, Tressières B, Dialo M, Elenga N, Mediamolle N, Mallard A, Hebert JC, Lachaume N, Couchy E, Hoen B, Fontanet A, , In utero Zika virus exposure and neurodevelopment at 24 months in toddlers normocephalic at birth: a cohort study., BMC Med 2021 Jan; 19(1): 12.

Pierre Garneret,Etienne Coz, Elian Martin, Jean-Claude Manuguerra, Elodie Brient-Litzler, Vincent Enouf, Daniel Felipe González Obando, Jean-Christophe Olivo-Marin, Fabrice Monti, Sylvie van der Werf, Jessica Vanhomwegen, Patrick Tabeling, Performing point-of-care molecular testing for SARS-CoV-2 with RNA extraction and isothermal amplification, PLOS ONE, 16(1), e0243712 - January 2021.

Silva L, Grosso F, Rodrigues C, Ksiezarek M, Ramos H, Peixe L, , The success of particular Acinetobacter baumannii clones: accumulating resistance and virulence inside a sugary shield., J Antimicrob Chemother 2021 01; 76(2): 305-311.

Joste V, Guillochon E, Fraering J, Vianou B, Watier L, Jafari-Guemouri S, Cot M, Houzé S, Aubouy A, Faucher JF, Argy N, Bertin GI, PfEMP1 A-Type ICAM-1-Binding Domains Are Not Associated with Cerebral Malaria in Beninese Children, mBio 2020 11; 11(6):e02103-20.

Barry MA, Arinal F, Talla C, Hedible BG, Sarr FD, Ba IO, Diop B, Dia N, Vray M, , Performance of case definitions and clinical predictors for influenza surveillance among patients followed in a rural cohort in Senegal., BMC Infect Dis 2021 Jan; 21(1): 31.

Luo DS, Li B, Shen XR, Jiang RD, Zhu Y, Wu J, Fan Y, Bourhy H, Hu B, Ge XY, Shi ZL, Dacheux L, , Characterization of Novel Rhabdoviruses in Chinese Bats., Viruses 2021 Jan; 13(1): .

Baillet N, Reynard S, Perthame E, Hortion J, Journeaux A, Mateo M, Carnec X, Schaeffer J, Picard C, Barrot L, Barron S, Vallve A, Duthey A, Jacquot F, Boehringer C, Jouvion G, Pietrosemoli N, Legendre R, Dillies MA, Allan R, Legras-Lachuer C, Carbonnelle C, Raoul H, Baize S, , Systemic viral spreading and defective host responses are associated with fatal Lassa fever in macaques., Commun Biol 2021 Jan; 4(1): 27.

Bosetti P, Kiem CT, Yazdanpanah Y, Fontanet A, Lina B, Colizza V, Cauchemez S, , Impact of mass testing during an epidemic rebound of SARS-CoV-2: a modelling study using the example of France., Euro Surveill 2021 01; 26(1): .

Merdrignac L, Aït El Belghiti F, Pandolfi E, Jané M, Murphy J, Fabiánová K, García Cenoz M, Flem E, Guillot S, Tozzi AE, Carmona G, Habington A, Zavadilová J, Navasués A, Bøås H, Lévy-Brühl D, Ferretti B, Lanaspa M, O'Sullivan N, Křížová P, Fernandino L, Bekkevold T, Hanslik T, Muñoz-Almagro C, Bacci S, Spiteri G, Valenciano M, Moren A, , , , Incidence and severity of pertussis hospitalisations in infants aged less than 1 year in 37 hospitals of six EU/EEA countries, results of PERTINENT sentinel pilot surveillance system, December 2015 to December 2018., Euro Surveill 2021 Jan; 26(4): .

Breurec S, Franck T, Njamkepo E, Mbecko JR, Rauzier J, Sanke-Waïgana H, Kamwiziku G, Piarroux R, Quilici ML, Weill FX, , Seventh Pandemic Vibrio cholerae O1 Sublineages, Central African Republic., Emerg Infect Dis 2021 Jan; 27(1): 262-266.

Anwar WA, El Gaafary M, Girgis SA, Rafik M, Hussein WM, Sos D, Mossad IM, Fontanet A, Temime L, , Hepatitis C virus infection and risk factors among patients and health-care workers of Ain Shams University hospitals, Cairo, Egypt., PLoS One 2021 ; 16(2): e0246836.

Galmiche S, Bruel T, Madec Y, Tondeur L, Grzelak L, Staropoli I, Cailleau I, Ungeheuer MN, Renaudat C, Fernandes Pellerin S, Hoen B, Schwartz O, Fontanet A, , Characteristics Associated with Olfactory and Taste Disorders in COVID-19., Neuroepidemiology 2021 ; 55(5): 381-386.

Kengne-Nde C, Tejiokem MC, Orne-Gliemann J, Melingui B, Koki Ndombo P, Essounga NA, Bissek AC, Cauchemez S, Tchendjou PT, , Couple oriented counselling improves male partner involvement in sexual and reproductive health of a couple: Evidence from the ANRS PRENAHTEST randomized trial., PLoS One 2021 ; 16(7): e0255330.

Mueller JE, Seanehia J, Yaro S, Trotter CL, Borrow R, Giles-Vernick T, Knowledge, beliefs and practices regarding prevention of bacterial meningitis in Burkina Faso, 5 years after MenAfriVac mass campaigns., PLoS One 2021 ; 16(7): e0253263.

Feige L, Sáenz-de-Santa-María I, Regnault B, Lavenir R, Lepelletier A, Halacu A, Rajerison R, Diop S, Nareth C, Reynes JM, Buchy P, Bourhy H, Dacheux L, , Transcriptome Profile During Rabies Virus Infection: Identification of Human CXCL16 as a Potential New Viral Target., Front Cell Infect Microbiol 2021 ; 11(): 761074.

O'Neill MB, Quach H, Pothlichet J, Aquino Y, Bisiaux A, Zidane N, Deschamps M, Libri V, Hasan M, Zhang SY, Zhang Q, Matuozzo D, Cobat A, Abel L, Casanova JL, Naffakh N, Rotival M, Quintana-Murci L, , Single-Cell and Bulk RNA-Sequencing Reveal Differences in Monocyte Susceptibility to Influenza A Virus Infection Between Africans and Europeans., Front Immunol 2021 ; 12(): 768189.

Domenech de Cellès M, Casalegno JS, Lina B, Opatowski L, , Estimating the impact of influenza on the epidemiological dynamics of SARS-CoV-2., PeerJ 2021 ; 9(): e12566.

Osman M, Papon N, Weill FX, , Endocannabinoids Attenuate the Virulence of Certain Enteropathogenic Bacteria., Trends Microbiol 2020 Dec; (): .

Voupawoe G, Varkpeh R, Kamara V, Sieh S, Traoré A, De Battisti C, Angot A, Loureiro LFLJ, Soumaré B, Dauphin G, Abebe W, Coetzer A, Scott T, Nel L, Blanton J, Dacheux L, Bonas S, Bourhy H, Gourlaouen M, Leopardi S, De Benedictis P, Léchenne M, Zinsstag J, Mauti S, , Rabies control in Liberia: Joint efforts towards Zero by 30., Acta Trop 2020 Dec; (): 105787.

Vu Hai V, Shimakawa Y, Kim J, Do Ngoc H, Le Minh Q, Laureillard D, Lemoine M, , Assessment and Simplification of Treatment Eligibility Among Patients With Chronic Hepatitis B Infection in Vietnam., Clin Infect Dis 2021 Sep; 73(5): e1072-e1077.

Ku MW, Bourgine M, Authié P, Lopez J, Nemirov K, Moncoq F, Noirat A, Vesin B, Nevo F, Blanc C, Souque P, Tabbal H, Simon E, Hardy D, Le Dudal M, Guinet F, Fiette L, Mouquet H, Anna F, Martin A, Escriou N, Majlessi L, Charneau P, , Intranasal vaccination with a lentiviral vector protects against SARS-CoV-2 in preclinical animal models., Cell Host Microbe 2021 Feb 10;29(2):236-249: .

Smith DRM, Duval A, Pouwels KB, Guillemot D, Fernandes J, Huynh BT, Temime L, Opatowski L, , , Optimizing COVID-19 surveillance in long-term care facilities: a modelling study., BMC Med 2020 12; 18(1): 386.

Silva L, Rodrigues C, Lira A, Leão M, Mota M, Lopes P, Novais Â, Peixe L, , Fourier transform infrared (FT-IR) spectroscopy typing: a real-time analysis of an outbreak by carbapenem-resistant Klebsiella pneumoniae., Eur J Clin Microbiol Infect Dis 2020 Dec; 39(12): 2471-2475.

Hennart M, Panunzi LG, Rodrigues C, Gaday Q, Baines SL, Barros-Pinkelnig M, Carmi-Leroy A, Dazas M, Wehenkel AM, Didelot X, Toubiana J, Badell E, Brisse S, , Population genomics and antimicrobial resistance in Corynebacterium diphtheriae., Genome Med 2020 11; 12(1): 107.

Galmiche S, Rahbe E, Fontanet A, Dinh A, Bénézit F, Lescure FX, Denis F, , Implementation of a Self-Triage Web Application for Suspected COVID-19 and Its Impact on Emergency Call Centers: Observational Study., J Med Internet Res 2020 11; 22(11): e22924.

Baay M, Lina B, Fontanet A, Marchant A, Saville M, Sabot P, Vandeputte J, Neels P, , Virology, epidemiology, immunology and vaccine development of SARS-CoV-2, update after nine months of pandemic., Biologicals 2020 Nov; (): .

Lataillade LG, Vazeille M, Obadia T, Madec Y, Mousson L, Kamgang B, Chen CH, Failloux AB, Yen PS, , Risk of yellow fever virus transmission in the Asia-Pacific region., Nat Commun 2020 11; 11(1): 5801.

Razafimahatratra SL, Wesolowski A, Rafetrarivony L, Heraud JM, Jones FK, Cauchemez S, Razafindratsimandresy R, Raharinantoanina SJ, Harimanana A, Collard JM, Metcalf CJE, Seroprevalence of pertussis in Madagascar and implications for vaccination., Epidemiol Infect 2020 Nov; 148(): e283.

N'Yetobouko Tabounie SJ, Kango SC, Bouscaillou J, Tricou V, Fontanet A, Kazanji M, Komas NP, , Fatal Outcome in a Hepatitis E Virus/Human Immunodeficiency Virus Co-Infected Malnourished Child in the Central African Republic., Infect Dis Rep 2020 Nov; 12(3): 82-86.

Victor Narat, Katherine R. Amato, Noémie Ranger, Maud Salmona, Séverine Mercier-Delarue, Stephanie Rupp, Philippe Ambata, Richard Njouom, François Simon, Tamara Giles-Vernick & Jérôme LeGoff, A multi-disciplinary comparison of great ape gut microbiota in a central African forest and European zoo, Narat, V., Amato, K.R., Ranger, N. et al. A multi-disciplinary comparison of great ape gut microbiota in a central African forest and European zoo. Sci Rep 10, 19107 (2020). .

Auffret N, Anghel R, Brisse S, Rey B, Schenesse D, Moquet O, , Elizabethkingia anophelis meningitis in a traveler returning from the Americas., Med Mal Infect 2020 Nov; (): .

Pomar L, Lambert V, Madec Y, Vouga M, Pomar C, Matheus S, Fontanet A, Panchaud A, Carles G, Baud D, , Placental infection by Zika virus in French Guiana., Ultrasound Obstet Gynecol 2020 Nov; 56(5): 740-748.

Adam DC, Wu P, Wong JY, Lau EHY, Tsang TK, Cauchemez S, Leung GM, Cowling BJ, , Clustering and superspreading potential of SARS-CoV-2 infections in Hong Kong., Nat Med 2020 11; 26(11): 1714-1719.

Sailleau C, Dumarest M, Vanhomwegen J, Delaplace M, Caro V, Kwasiborski A, Hourdel V, Chevaillier P, Barbarino A, Comtet L, Pourquier P, Klonjkowski B, Manuguerra JC, Zientara S, Le Poder S, First detection and genome sequencing of SARS-CoV-2 in an infected cat in France., Transbound Emerg Dis 2020 Nov; 67(6): 2324-2328.

Opatowski L, Opatowski M, Vong S, Temime L, , A One-Health Quantitative Model to Assess the Risk of Antibiotic Resistance Acquisition in Asian Populations: Impact of Exposure Through Food, Water, Livestock and Humans., Risk Anal 2020 Oct; (): .

Rakotomalala RS, Andrianirina ZZ, Ratsima E, Randrianandraina P, Randrianirina F, Edosoa GT, Rabenandrianina T, Badell E, Toubiana J, Andrianarimanana D, Brisse S, Rasamindrakotroka A, , Corynebacterium diphtheriae Infection in Mahajanga, Madagascar: First Case Report., J Trop Pediatr 2020 Oct; (): .

Oprea* M, Njamkepo* E, Cristea* D, Zhukova* A, Clark CG, Kravetz AN, Monakhova E, Ciontea AS, Cojocaru R, Rauzier J, Damian M, Gascuel O, Quilici ML, Weill FX, , The seventh pandemic of cholera in Europe revisited by microbial genomics., Nat Commun 2020 10; 11(1): 5347.

Serris A, Stass R, Bignon EA, Muena NA, Manuguerra JC, Jangra RK, Li S, Chandran K, Tischler ND, Huiskonen JT, Rey FA, Guardado-Calvo P, The Hantavirus Surface Glycoprotein Lattice and Its Fusion Control Mechanism., Cell 2020 Oct; 183(2): 442-456.e16.

Cauchemez S, Kiem CT, Paireau J, Rolland P, Fontanet A, , Lockdown impact on COVID-19 epidemics in regions across metropolitan France., Lancet 2020 10; 396(10257): 1068-1069.

Gautret P, Diaz-Menendez M, Goorhuis A, Wallace RM, Msimang V, Blanton J, Dacheux L, Parize P, Blumberg L, Bourhy H, Grobusch MP, , Epidemiology of rabies cases among international travellers, 2013-2019: A retrospective analysis of published reports., ; 36(): 101766.

Chaguza C, Yang M, Cornick JE, du Plessis M, Gladstone RA, Kwambana-Adams BA, Lo SW, Ebruke C, Tonkin-Hill G, Peno C, Senghore M, Obaro SK, Ousmane S, Pluschke G, Collard JM, Sigaùque B, French N, Klugman KP, Heyderman RS, McGee L, Antonio M, Breiman RF, von Gottberg A, Everett DB, Kadioglu A, Bentley SD, Bacterial genome-wide association study of hyper-virulent pneumococcal serotype 1 identifies genetic variation associated with neurotropism., Commun Biol 2020 Oct; 3(1): 559.

Biolchi A, De Angelis G, Moschioni M, Tomei S, Brunelli B, Giuliani M, Bambini S, Borrow R, Claus H, Gorla MCO, Hong E, Lemos APS, Lucidarme J, Taha MK, Vogel U, Comanducci M, Budroni S, Giuliani MM, Rappuoli R, Pizza M, Boucher P, , Multicomponent meningococcal serogroup B vaccination elicits cross-reactive immunity in infants against genetically diverse serogroup C, W and Y invasive disease isolates., Vaccine 2020 Oct; (): .

Cohen D, Ghosh S, Shimakawa Y, Ramou N, Garcia PS, Dubois A, Guillot C, Kakwata-Nkor Deluce N, Tilloy V, Durand G, Voegele C, Ndow G, d'Alessandro U, Brochier-Armanet C, Alain S, Le Calvez-Kelm F, Hall J, Zoulim F, Mendy M, Thursz M, Lemoine M, Chemin I, , Hepatitis B virus preS2Δ38-55 variants: A newly identified risk factor for hepatocellular carcinoma., JHEP Rep 2020 Oct; 2(5): 100144.

Willerton L, Lucidarme J, Campbell H, Caugant DA, Claus H, Jacobsson S, Ladhani SN, Mölling P, Neri A, Stefanelli P, Taha MK, Vogel U, Borrow R, , Geographically widespread invasive meningococcal disease caused by a ciprofloxacin resistant non-groupable strain of the ST-175 clonal complex., J Infect 2020 Oct; 81(4): 575-584.

Bohers C, Mousson L, Madec Y, Vazeille M, Rhim A, M'ghirbi Y, Bouattour A, Failloux AB, , The recently introduced Aedes albopictus in Tunisia has the potential to transmit chikungunya, dengue and Zika viruses., PLoS Negl Trop Dis 2020 10; 14(10): e0008475.

Raherindrasana A, Metcalf CJ, Heraud JM, Cauchemez S, Winter A, Wesolowski A, Razafindratsimandresy R, Randriamampionona L, Rafalimanantsoa SA, Masembe Y, Ndiaye C, Rakotonirina J, , Towards better targeting: lessons from a posthoneymoon measles outbreak in Madagascar, 2018-2019., BMJ Glob Health 2020 10; 5(10): .

Levy M, Aouiti Trabelsi M, Taha MK, , Evidence for Multi-Organ Infection During Experimental Meningococcal Sepsis due to ST-11 Isolates in Human Transferrin-Transgenic Mice., Microorganisms 2020 Sep; 8(10): .

de Melo GD, Sonthonnax F, Lepousez G, Jouvion G, Minola A, Zatta F, Larrous F, Kergoat L, Mazo C, Moigneu C, Aiello R, Salomoni A, Brisebard E, De Benedictis P, Corti D, Bourhy H, , A combination of two human monoclonal antibodies cures symptomatic rabies., EMBO Mol Med 2020 Sep; (): e12628.

Lemoine M, Kim JU, Ndow G, Bah S, Forrest K, Rwegasha J, Bouyou M, Napon D, Somda S, Sawadogo A, Sombie R, Shimakawa Y, , Effect of the COVID-19 pandemic on viral hepatitis services in sub-Saharan Africa., Lancet Gastroenterol Hepatol 2020 Nov; 5(11): 966-967.

Pivette M, Taha MK, Barret AS, Polard E, Hautier MB, Dufour JB, Faisant M, King LA, Antona D, Levy-Bruhl D, Tillaut H, Scanff A, Morival C, Aranda Grau JH, Guillaumot P, Gagnière B, , Targeted vaccination campaigns of teenagers after two clusters of B invasive meningococcal disease in Brittany, France, 2017., BMC Public Health 2020 Sep; 20(1): 1382.

Nekkab N, Crépey P, Astagneau P, Opatowski L, Temime L, , Assessing the role of inter-facility patient transfer in the spread of carbapenemase-producing Enterobacteriaceae: the case of France between 2012 and 2015., Sci Rep 2020 09; 10(1): 14910.

Fontanet A, Cauchemez S, , COVID-19 herd immunity: where are we?, Nat Rev Immunol 2020 10; 20(10): 583-584.

Huynh BT, Passet V, Rakotondrasoa A, Diallo T, Kerleguer A, Hennart M, Lauzanne A, Herindrainy P, Seck A, Bercion R, Borand L, Pardos de la Gandara M, Delarocque-Astagneau E, Guillemot D, Vray M, Garin B, Collard JM, Rodrigues C, Brisse S, Klebsiella pneumoniae carriage in low-income countries: antimicrobial resistance, genomic diversity and risk factors., Gut Microbes 2020 Sep; 11(5): 1287-1299.

Grzelak L, Temmam S, Planchais C, Demeret C, Tondeur L, Huon C, Guivel-Benhassine F, Staropoli I, Chazal M, Dufloo J, Planas D, Buchrieser J, Rajah MM, Robinot R, Porrot F, Albert M, Chen KY, Crescenzo-Chaigne B, Donati F, Anna F, Souque P, Gransagne M, Bellalou J, Nowakowski M, Backovic M, Bouadma L, Le Fevre L, Le Hingrat Q, Descamps D, Pourbaix A, Laouénan C, Ghosn J, Yazdanpanah Y, Besombes C, Jolly N, Pellerin-Fernandes S, Cheny O, Ungeheuer MN, Mellon G, Morel P, Rolland S, Rey FA, Behillil S, Enouf V, Lemaitre A, Créach MA, Petres S, Escriou N, Charneau P, Fontanet A, Hoen B, Bruel T, Eloit M, Mouquet H, Schwartz O, van der Werf S, A comparison of four serological assays for detecting anti-SARS-CoV-2 antibodies in human serum samples from different populations., Sci Transl Med 2020 Sep; 12(559): .

Tubiana S, Varon E, Biron C, Ploy MC, Mourvillier B, Taha MK, Revest M, Poyart C, Martin-Blondel G, Lecuit M, Cua E, Pasquet B, Preau M, Hoen B, Duval X, , , Community-acquired bacterial meningitis in adults: in-hospital prognosis, long-term disability and determinants of outcome in a multicentre prospective cohort., Clin Microbiol Infect 2020 Sep; 26(9): 1192-1200.

Fafi-Kremer S, Bruel T, Madec Y, Grant R, Tondeur L, Grzelak L, Staropoli I, Anna F, Souque P, Fernandes-Pellerin S, Jolly N, Renaudat C, Ungeheuer MN, Schmidt-Mutter C, Collongues N, Bolle A, Velay A, Lefebvre N, Mielcarek M, Meyer N, Rey D, Charneau P, Hoen B, De Seze J, Schwartz O, Fontanet A, , Serologic responses to SARS-CoV-2 infection among hospital staff with mild disease in eastern France., EBioMedicine 2020 Sep; 59(): 102915.

Dussart P, Duong V, Bleakley K, Fortas C, Lorn Try P, Kim KS, Choeung R, In S, Andries AC, Cantaert T, Flamand M, Buchy P, Sakuntabhai A, , Comparison of dengue case classification schemes and evaluation of biological changes in different dengue clinical patterns in a longitudinal follow-up of hospitalized children in Cambodia., PLoS Negl Trop Dis 2020 09; 14(9): e0008603.

Noel G, Badmasti F, Nikbin VS, Zahraei SM, Madec Y, Tavel D, Aït-Ahmed M, Guiso N, Shahcheraghi F, Taieb F, Transversal sero-epidemiological study of Bordetella pertussis in Tehran, Iran., PLoS One 2020 ; 15(9): e0238398.

Feagins AR, Ronveaux O, Taha MK, Caugant DA, Smith V, Fernandez K, Glennie L, Fox LM, Wang X, , Next generation rapid diagnostic tests for meningitis diagnosis., J Infect 2020 Sep; (): .

Grant R, Nguyen LL, Breban R, , Modelling human-to-human transmission of monkeypox., Bull World Health Organ 2020 Sep; 98(9): 638-640.

Guillier L, Martin-Latil S, Chaix E, Thébault A, Pavio N, Le Poder S, Batéjat C, Biot F, Koch L, Schaffner DW, Sanaa M, , , Modeling the Inactivation of Viruses from the Coronaviridae Family in Response to Temperature and Relative Humidity in Suspensions or on Surfaces., Appl Environ Microbiol 2020 09; 86(18): .

Taha M-K, Deghman A-E, Impact of COVID-19 pandemic and the lockdown on invasive meningococcal disease, BMC Res Notes.

Shimakawa Y, Lemoine M, , Reply to: “Validation of the TREAT-B score for hepatitis B treatment eligibility in a large Asian cohort: TREAT-B improves with age”., J Hepatol 2020 Nov; 73(5): 1284-1285.

Tchatchouang S, Nzouankeu A, Hong E, Terrade A, Denizon M, Deghmane AE, Ndiang SMT, Pefura-Yone EW, Penlap Beng V, Njouom R, Fonkoua MC, Taha MK, , Analysis of Haemophilus species in patients with respiratory tract infections in Yaoundé, Cameroon., Int J Infect Dis 2020 Aug; 100(): 12-20.

Funk AL, Lu Y, Yoshida K, Zhao T, Boucheron P, van Holten J, Chou R, Bulterys M, Shimakawa Y, , Efficacy and safety of antiviral prophylaxis during pregnancy to prevent mother-to-child transmission of hepatitis B virus: a systematic review and meta-analysis., Lancet Infect Dis 2021 Jan; 21(1): 70-84.

Boucheron P, Lu Y, Yoshida K, Zhao T, Funk AL, Lunel-Fabiani F, Guingané A, Tuaillon E, van Holten J, Chou R, Bulterys M, Shimakawa Y, , Accuracy of HBeAg to identify pregnant women at risk of transmitting hepatitis B virus to their neonates: a systematic review and meta-analysis., Lancet Infect Dis 2021 Jan; 21(1): 85-96.

Mashe T, Domman D, Tarupiwa A, Manangazira P, Phiri I, Masunda K, Chonzi P, Njamkepo E, Ramudzulu M, Mtapuri-Zinyowera S, Smith AM, Weill FX, , Highly Resistant Cholera Outbreak Strain in Zimbabwe., N. Engl. J. Med. 2020 08; 383(7): 687-689.

Izdebski R, Sitkiewicz M, Urbanowicz P, Krawczyk M, Brisse S, Gniadkowski M, , Genomic background of the Klebsiella pneumoniae NDM-1 outbreak in Poland, 2012-18., J. Antimicrob. Chemother. 2020 Aug; (): .

Parize P, Travecedo Robledo IC, Cervantes-Gonzalez M, Kergoat L, Larrous F, Serra-Cobo J, Dacheux L, Bourhy H, , Circumstances of Human-Bat interactions and risk of lyssavirus transmission in metropolitan France., 2020 Aug; (): .

Pierre Garneret, Etienne Coz, Elian Martin, Jean-Claude Manuguerra, Elodie Brient-Litzler, Vincent Enouf, Daniel Felipe Gonzalez Obando, Jean-Christophe Olivo-Marin, Fabrice Monti, Sylvie Van der Werf, Jessica Vanhomwegen, Patrick Jean Tabeling, Highly performing point-of-care molecular testing for SARS-CoV-2 with RNA extraction and isothermal amplification., medRxiv 2020.08.01.20166538.

Aguilar-Rojas A, Castellanos-Castro S, Matondo M, Gianetto QG, Varet H, Sismeiro O, Legendre R, Fernandes J, Hardy D, Coppée JY, Olivo-Marin JC, Guillen N, , Insights into amebiasis using a human 3D-intestinal model., Cell Microbiol 2020 Aug; 22(8): e13203.

Vallès X, Stenseth NC, Demeure C, Horby P, Mead PS, Cabanillas O, Ratsitorahina M, Rajerison M, Andrianaivoarimanana V, Ramasindrazana B, Pizarro-Cerda J, Scholz HC, Girod R, Hinnebusch BJ, Vigan-Womas I, Fontanet A, Wagner DM, Telfer S, Yazdanpanah Y, Tortosa P, Carrara G, Deuve J, Belmain SR, D'Ortenzio E, Baril L, Human plague: An old scourge that needs new answers., PLoS Negl Trop Dis 2020 Aug; 14(8): e0008251.

Rodrigues C, d'Humières C, Papin G, Passet V, Ruppé E, Brisse S, , Community-acquired infection caused by the uncommon hypervirulent Klebsiella pneumoniae ST66-K2 lineage., Microb Genom 2020 08; 6(8): .

Guillot S, Mizrahi A, Armatys N, Chat L, Le Monnier A, Brisse S, Toubiana J, , Low Detection Rate of Bordetella pertussis Using the BioFire FilmArray Respiratory Panel 2plus., Open Forum Infect Dis 2020 Aug; 7(8): ofaa267.

Chang YY, Stévenin V, Duchateau M, Giai Gianetto Q, Hourdel V, Rodrigues CD, Matondo M, Reiling N, Enninga J, Shigella hijacks the exocyst to cluster macropinosomes for efficient vacuolar escape., PLoS Pathog 2020 Aug; 16(8): e1008822.

Legros V, Jeannin P, Burlaud-Gaillard J, Chaze T, Gianetto QG, Butler-Browne G, Mouly V, Zoladek J, Afonso PV, Gonzàlez MN, Matondo M, Riederer I, Roingeard P, Gessain A, Choumet V, Ceccaldi PE, , Differentiation-dependent susceptibility of human muscle cells to Zika virus infection., PLoS Negl Trop Dis 2020 08; 14(8): e0008282.

Escolano S, Mueller JE, Tubert-Bitter P, , Accounting for indirect protection in the benefit-risk ratio estimation of rotavirus vaccination in children under the age of 5 years, France, 2018., Euro Surveill 2020 08; 25(33): .

Metcalf CJE, Wesolowski A, Winter AK, Lessler J, Cauchemez S, Moss WJ, McLean AR, Grenfell BT, , Using Serology to Anticipate Measles Post-honeymoon Period Outbreaks., Trends Microbiol 2020 08; 28(8): 597-600.

Borrow R, Taha MK, Giuliani MM, Pizza M, Banzhoff A, Bekkat-Berkani R, , Methods to evaluate serogroup B meningococcal vaccines: From predictions to real-world evidence., J Infect 2020 Jul; (): .

Huus KE, Rodriguez-Pozo A, Kapel N, Nestoret A, Habib A, Dede M, Manges A, Collard JM, Sansonetti PJ, Vonaesch P, Finlay BB, Immunoglobulin recognition of fecal bacteria in stunted and non-stunted children: findings from the Afribiota study., Microbiome 2020 Jul; 8(1): 113.

Parize P, Poujol P, Morineau Le Houssine P, Goesch J, Lucet C, Basuyau L, Cailhol J, Dacheux L, Bourhy H, Consigny PH, , Immune response to rabies post-exposure prophylaxis in patients with non-HIV secondary immunodeficiencies., 2020 Jul; 38(33): 5091-5094.

Leo S, Lazarevic V, Girard M, Getaz-Jimenez Velasco GC, Gaïa N, Renzi G, Cherkaoui A, Hong E, Taha MK, Schrenzel J, , Strain coverage of Bexsero vaccine assessed by whole-genome sequencing over a cohort of invasive meningococci of serogroups B and W isolated in Switzerland., Vaccine 2020 Jul; 38(33): 5324-5331.

Salje H, Tran Kiem C, Lefrancq N, Courtejoie N, Bosetti P, Paireau J, Andronico A, Hozé N, Richet J, Dubost CL, Le Strat Y, Lessler J, Levy-Bruhl D, Fontanet A, Opatowski L, Boelle PY, Cauchemez S, , Estimating the burden of SARS-CoV-2 in France., Science 2020 07; 369(6500): 208-211.

Lee KH, Nikolay B, Sazzad HMS, Hossain MJ, Khan AKMD, Rahman M, Satter SM, Nichol ST, Klena JD, Pulliam JRC, Kilpatrick AM, Sultana S, Afroj S, Daszak P, Luby S, Cauchemez S, Salje H, Gurley ES, , Changing Contact Patterns Over Disease Progression: Nipah Virus as a Case Study., J Infect Dis 2020 07; 222(3): 438-442.

Alberto C, Osdoit S, Villani AP, Bellec L, Belmonte O, Badell E, Brisse S, Toubiana J, Schrenzel J, Bagny K, , Cutaneous ulcers revealing diphtheria: A re-emerging disease imported from Indian Ocean countries?, Ann Dermatol Venereol 2020 Jul; (): .

Rakotondrasoa A, Passet V, Herindrainy P, Garin B, Kermorvant-Duchemin E, Delarocque-Astagneau E, Guillemot D, Huynh BT, Brisse S, Collard JM, Characterization of Klebsiella pneumoniae isolates from a mother-child cohort in Madagascar., J Antimicrob Chemother 2020 Jul; 75(7): 1736-1746.

Besombes C, Njouom R, Paireau J, Lachenal G, Texier G, Tejiokem M, Cauchemez S, Pépin J, Fontanet A, , The epidemiology of hepatitis delta virus infection in Cameroon., Gut 2020 07; 69(7): 1294-1300.

Baay M, Lina B, Fontanet A, Marchant A, Saville M, Sabot P, Duclos P, Vandeputte J, Neels P, , SARS-CoV-2: Virology, epidemiology, immunology and vaccine development., Biologicals 2020 Jul; 66(): 35-40.

Nguyen-Van-Tam JS, Killingley B, Enstone J, Hewitt M, Pantelic J, Grantham ML, Bueno de Mesquita PJ, Lambkin-Williams R, Gilbert A, Mann A, Forni J, Noakes CJ, Levine MZ, Berman L, Lindstrom S, Cauchemez S, Bischoff W, Tellier R, Milton DK, , , Minimal transmission in an influenza A (H3N2) human challenge-transmission model within a controlled exposure environment., PLoS Pathog 2020 07; 16(7): e1008704.

Rodgers E, Bentley SD, Borrow R, Bratcher HB, Brisse S, Brueggemann AB, Caugant DA, Findlow J, Fox L, Glennie L, Harrison LH, Harrison OB, Heyderman RS, van Rensburg MJ, Jolley KA, Kwambana-Adams B, Ladhani S, LaForce M, Levin M, Lucidarme J, MacAlasdair N, Maclennan J, Maiden MCJ, Maynard-Smith L, Muzzi A, Oster P, Rodrigues CMC, Ronveaux O, Serino L, Smith V, van der Ende A, Vázquez J, Wang X, Yezli S, Stuart JM, , The global meningitis genome partnership., J. Infect. 2020 Jun; (): .

Mauti S, Léchenne M, Naïssengar S, Traoré A, Kallo V, Kouakou C, Couacy-Hymann E, Gourlaouen M, Mbilo C, Pyana PP, Madaye E, Dicko I, Cozette P, De Benedictis P, Bourhy H, Zinsstag J, Dacheux L, , Field Postmortem Rabies Rapid Immunochromatographic Diagnostic Test for Resource-Limited Settings with Further Molecular Applications., 2020 06; (160): .

Vega-Rúa A, Marconcini M, Madec Y, Manni M, Carraretto D, Gomulski LM, Gasperi G, Failloux AB, Malacrida AR, , Vector competence of Aedes albopictus populations for chikungunya virus is shaped by their demographic history., Commun Biol 2020 Jun; 3(1): 326.

Pallandre L, Luo D, Feuvrier C, Lieffrig F, Pozet F, Dacheux L, Bigarré L, , Revisiting the Classification of Percid Perhabdoviruses Using New Full-Length Genomes., 2020 06; 12(6): .

Dieng I, Hedible BG, Diagne MM, El Wahed AA, Diagne CT, Fall C, Richard V, Vray M, Weidmann M, Faye O, Sall AA, Faye O, , Mobile Laboratory Reveals the Circulation of Dengue Virus Serotype I of Asian Origin in Medina Gounass (Guediawaye), Senegal., Diagnostics (Basel) 2020 Jun; 10(6): .

Bassoum O, Kimura M, Tal Dia A, Lemoine M, Shimakawa Y, , Coverage and Timeliness of Birth Dose Vaccination in Sub-Saharan Africa: A Systematic Review and Meta-Analysis., Vaccines (Basel) 2020 Jun; 8(2): .

Denis F, Galmiche S, Dinh A, Fontanet A, Scherpereel A, Benezit F, Lescure FX, , Epidemiological Observations on the Association Between Anosmia and COVID-19 Infection: Analysis of Data From a Self-Assessment Web Application., J Med Internet Res 2020 06; 22(6): e19855.

Hozé N, Salje H, Rousset D, Fritzell C, Vanhomwegen J, Bailly S, Najm M, Enfissi A, Manuguerra JC, Flamand C, Cauchemez S, , Reconstructing Mayaro virus circulation in French Guiana shows frequent spillovers., Nat Commun 2020 06; 11(1): 2842.

Filippone C, Legros V, Jeannin P, Choumet V, Butler-Browne G, Zoladek J, Mouly V, Gessain A, Ceccaldi PE, , Arboviruses and Muscle Disorders: From Disease to Cell Biology., Viruses 2020 06; 12(6): .

Silvia Castellanos-Castro, Arturo Aguilar-Rojas, Mariette Matondo, Quentin Gian Gianetto, Hugo Varet, Odile Sismeiro, Rachel Legendre, Julien Fernandes, David Hardy, Jean Yves Coppée, Jean Christophe Olivo-Marin, Nancy Guillen, Human Immune Response Triggered by Entamoeba histolytica in a 3D-Intestinal Model, Eukaryome Impact on Human Intestine Homeostasis and Mucosal Immunology. Springer, Cham.

Castellanos LR, van der Graaf-van Bloois L, Donado-Godoy P, Veldman K, Duarte F, Acuña MT, Jarquín C, Weill FX, Mevius DJ, Wagenaar JA, Hordijk J, Zomer AL, , Antimicrobial Resistance in Salmonella enterica Serovar Paratyphi B Variant Java in Poultry from Europe and Latin America., Emerging Infect. Dis. 2020 Jun; 26(6): 1164-1173.

Salam AP, Raberahona M, Andriantsalama P, Read L, Andrianarintsiferantsoa F, Razafinambinintsoa T, Rakotomalala R, Hasiniatsy RNE, Razafimandimby D, Castle L, Funk A, Mangahasimbola RT, Renaud B, Bertherat E, Lovering A, Heraud JM, Andrianaivoarimanana V, Frédérique R, Razanajatovo N, Baril L, Fontanet A, Rajerison M, Horby P, Randria M, Randremanana R, , Factors Influencing Atypical Clinical Presentations during the 2017 Madagascar Pneumonic Plague Outbreak: A Prospective Cohort Study., Am J Trop Med Hyg 2020 06; 102(6): 1309-1315.

Temime L, Gustin MP, Duval A, Buetti N, Crépey P, Guillemot D, Thiébaut R, Vanhems P, Zahar JR, Smith DRM, Opatowski L, , A Conceptual Discussion About the Basic Reproduction Number of Severe Acute Respiratory Syndrome Coronavirus 2 in Healthcare Settings., Clin Infect Dis 2021 01; 72(1): 141-143.

C. Demichelis, J. Oszwald, V. Narat, F. Pennec, J.C., T. Giles-Vernick, Multidimensional analysis of landscape dynamics in a Central African forest-savanna mosaic, African Journal of Ecology .

Ramassamy JL, Tortevoye P, Ntab B, Seve B, Carles G, Gaquière D, Madec Y, Fontanet A, Gessain A, , Adult T-cell leukemia/lymphoma incidence rate in French Guiana: a prospective cohort of women infected with HTLV-1., Blood Adv 2020 05; 4(9): 2044-2048.

Nikolay B, Salje H, Khan AKMD, Sazzad HMS, Satter SM, Rahman M, Doan S, Knust B, Flora MS, Luby SP, Cauchemez S, Gurley ES, , A Framework to Monitor Changes in Transmission and Epidemiology of Emerging Pathogens: Lessons From Nipah Virus., J Infect Dis 2020 05; 221(Suppl 4): S363-S369.

Tran TH, Nguyen BT, Nguyen TA, Pham TTP, Nguyen TTT, Mai HTB, Pham HB, Nguyen TM, Phan HTT, Do NT, Ait-Ahmed M, Taieb F, Madec Y, Dried blood spots perform well to identify patients with active HCV infection in Vietnam., J Viral Hepat 2020 May; 27(5): 514-519.

Bouyer B, Arvieu R, Gerlinger MP, Watier L, Kassis N, Nerome S, Diop A, Mainardi JL, Durieux P, Guigui P, Individual decontamination measures reduce by two the incidence of surgical site infections in spinal surgery, Orthop Traumatol Surg Res. 2020 May 1;S1877-0568(20)30073-6.

Diarra I, Nurtop E, Sangaré AK, Sagara I, Pastorino B, Sacko S, Zeguimé A, Coulibaly D, Fofana B, Gallian P, Priet S, Drexler JF, Failloux AB, Dabo A, Thera MA, Djimdé A, Kouriba B, Cauchemez S, de Lamballerie X, Hozé N, Doumbo OK, , Zika Virus Circulation in Mali., Emerg Infect Dis 2020 05; 26(5): 945-952.

Deghmane AE, Haeghebaert S, Hong E, Jousset A, Barret AS, Taha MK, , Emergence of new genetic lineage, ST-9316, of Neisseria meningitidis group W in Hauts-de-France region, France 2013-2018., J Infect 2020 May; 80(5): 519-526.

Du Z, Wang L, Cauchemez S, Xu X, Wang X, Cowling BJ, Meyers LA, , Risk for Transportation of Coronavirus Disease from Wuhan to Other Cities in China., Emerg Infect Dis 2020 05; 26(5): 1049-1052.

Yoshida K, Desbiolles A, Feldman SF, Ahn SH, Alidjinou EK, Atsukawa M, Bocket L, Brunetto MR, Buti M, Carey I, Caviglia GP, Chen EQ, Cornberg M, Enomoto M, Honda M, Zu Siederdissen CH, Ishigami M, Janssen HLA, Maasoumy B, Matsui T, Matsumoto A, Nishiguchi S, Riveiro-Barciela M, Takaki A, Tangkijvanich P, Toyoda H, van Campenhout MJH, Wang B, Wei L, Yang HI, Yano Y, Yatsuhashi H, Yuen MF, Tanaka E, Lemoine M, Tanaka Y, Shimakawa Y, , Hepatitis B Core-Related Antigen to Indicate High Viral Load: Systematic Review and Meta-Analysis of 10,397 Individual Participants., Clin Gastroenterol Hepatol 2021 Jan; 19(1): 46-60.e8.

Pérot P, Falguieres M, Arowas L, Laude H, Foy JP, Goudot P, Corre-Catelin N, Ungeheuer MN, Caro V, Heard I, Eloit M, Gessain A, Bertolus C, Berthet N, Investigation of viral etiology in potentially malignant disorders and oral squamous cell carcinomas in non-smoking, non-drinking patients, PLoS ONE 2020;15(4):e0232138.

Kraemer MUG, Pigott DM, Hill SC, Vanderslott S, Reiner RC, Stasse S, Brownstein JS, Gutierrez B, Dennig F, Hay SI, Wint GRW, Pybus OG, Castro MC, Vinck P, Pham PN, Nilles EJ, Cauchemez S, , Dynamics of conflict during the Ebola outbreak in the Democratic Republic of the Congo 2018-2019., BMC Med 2020 04; 18(1): 113.

Domenech de Cellès M, Campbell H, Borrow R, Taha MK, Opatowski L, , Transmissibility and pathogenicity of the emerging meningococcal serogroup W sequence type-11 complex South American strain: a mathematical modeling study., BMC Med 2020 Apr; 18(1): 109.

Eriksson L, Stenmark B, Deghmane AE, Thulin Hedberg S, Säll O, Fredlund H, Mölling P, Taha MK, , Difference in virulence between Neisseria meningitidis serogroups W and Y in transgenic mice., BMC Microbiol 2020 Apr; 20(1): 92.

Raman J, Gast L, Balawanth R, Tessema S, Brooke B, Maharaj R, Munhenga G, Tshikae P, Lakan V, Mwamba T, Makowa H, Sangweni L, Mkhabela M, Zondo N, Mohulatsi E, Nyawo Z, Ngxongo S, Msimang S, Dagata N, Greenhouse B, Birkholtz LM, Shirreff G, Graffy R, Qwabe B, Moonasar D, High levels of imported asymptomatic malaria but limited local transmission in KwaZulu-Natal, a South African malaria-endemic province nearing malaria elimination., Malar J 2020 Apr; 19(1): 152.

Pierre-Audigier C, Talla C, Alame-Emane AK, Audigier B, Grall N, Ruimy R, Andremont A, Cadet-Daniel V, Sola C, Takiff H, Gicquel B, Vray M, Armand-Lefevre L, , Tuberculosis trends in a hot-spot region in Paris, France., Int J Tuberc Lung Dis 2020 04; 24(4): 428-435.

Taha MK, Gaudelus J, Deghmane AE, Caron F, , Recent changes of invasive meningococcal disease in France: arguments to revise the vaccination strategy in view of those of other countries., Hum Vaccin Immunother 2020 Mar; (): 1-6.

Rodrigues C, Sousa C, Lopes JA, Novais Â, Peixe L, , A Front Line on Klebsiella pneumoniae Capsular Polysaccharide Knowledge: Fourier Transform Infrared Spectroscopy as an Accurate and Fast Typing Tool., mSystems 2020 Mar; 5(2): .

Barbier E, Rodrigues C, Depret G, Passet V, Gal L, Piveteau P, Brisse S, , The ZKIR Assay, a Real-Time PCR Method for the Detection of Klebsiella pneumoniae and Closely Related Species in Environmental Samples., Appl Environ Microbiol 2020 03; 86(7): .

Kouanfack C, Unal G, Schaeffer L, Kfutwah A, Aghokeng A, Mougnutou R, Tchemgui-Noumsi N, Alessandri-Gradt E, Delaporte E, Simon F, Vray M, Plantier JC, , , Comparative Immunovirological and Clinical Responses to Antiretroviral Therapy Between HIV-1 Group O and HIV-1 Group M Infected Patients., Clin Infect Dis 2020 Mar; 70(7): 1471-1477.

Rasolonjatovo FS, Guis H, Rajeev M, Dacheux L, Arivony Nomenjanahary L, Razafitrimo G, Rafisandrantantsoa JT, Cêtre-Sossah C, Heraud JM, Andriamandimby SF, Enabling animal rabies diagnostic in low-access areas: Sensitivity and specificity of a molecular diagnostic test from cerebral tissue dried on filter paper, PLoS Negl Trop Dis 2020 Mar;14(3):e0008116.

Kraemer MUG, Yang CH, Gutierrez B, Wu CH, Klein B, Pigott DM, , du Plessis L, Faria NR, Li R, Hanage WP, Brownstein JS, Layan M, Vespignani A, Tian H, Dye C, Cauchemez S, Pybus OG, Scarpino SV, , The effect of human mobility and control measures on the COVID-19 epidemic in China., medRxiv 2020 Mar; (): .

Boye S, Shimakawa Y, Vray M, Giles-Vernick T, , Limited Awareness of Hepatitis B but Widespread Recognition of Its Sequelae in Rural Senegal: A Qualitative Study., Am J Trop Med Hyg 2020 Mar; 102(3): 637-643.

Shah R, Boucheron P, Mandaliya K, Kattamaiyo A, Chevaliez S, Shimakawa Y, Songok E, Lemoine M, , Hepatitis C virus infection in people who inject drugs in Africa., Lancet Infect Dis 2020 Mar; 20(3): 282-283.

Chen J, Zhu H, Horby PW, Wang Q, Zhou J, Jiang H, Liu L, Zhang T, Zhang Y, Chen X, Deng X, Nikolay B, Wang W, Cauchemez S, Guan Y, Uyeki TM, Yu H, , Specificity, kinetics and longevity of antibody responses to avian influenza A(H7N9) virus infection in humans., J Infect 2020 03; 80(3): 310-319.

Lim AG, Walker JG, Mafirakureva N, Khalid GG, Qureshi H, Mahmood H, Trickey A, Fraser H, Aslam K, Falq G, Fortas C, Zahid H, Naveed A, Auat R, Saeed Q, Davies CF, Mukandavire C, Glass N, Maman D, Martin NK, Hickman M, May MT, Hamid S, Loarec A, Averhoff F, Vickerman P, , Effects and cost of different strategies to eliminate hepatitis C virus transmission in Pakistan: a modelling analysis., Lancet Glob Health 2020 03; 8(3): e440-e450.

Tchuinte PLS, Rabenandrasana MAN, Ramparany L, Ratsima E, Enouf V, Randrianirina F, Collard JM, Genome-based insights into the resistomes and mobilomes of two Providencia rettgeri strains isolated from wound infections in Madagascar., J Glob Antimicrob Resist 2020 Mar; 20(): 178-182.

Bénédicte Melot, Sylvaine Bastian, Eric Valade, Nathalie Dournon, Olivier Gorgé, Anne Le Fleche-Mateos, Charlotte Idier, Mireille Vernier, Elisabeth Fernandes, Bruno Hoen, Sébastien Breurec, Michel Carles, Three New Cases of Melioidosis, Guadeloupe, French West Indies, Emerging Infectious Diseases, 2020, 26 (3), pp.617-619. ⟨10.3201/eid2603.190718⟩.

Badell E, Hennart M, Rodrigues C, Passet V, Dazas M, Panunzi L, Bouchez V, Carmi-Leroy A, Toubiana J, Brisse S, , Corynebacterium rouxii sp. nov., a novel member of the diphtheriae species complex., Res Microbiol ; 171(3-4): 122-127.

Haddar CH, Terrade A, Verhoeven P, Njanpop-Lafourcade BM, Dosso M, Sidikou F, Mahamane AE, Lombart JP, Razki A, Hong E, Agnememel A, Begaud E, Germani Y, Pozzetto B, Taha MK, , Validation of a New Rapid Detection Test for Detection of Neisseria meningitidis A/C/W/X/Y Antigens in Cerebrospinal Fluid., J Clin Microbiol 2020 02; 58(3): .

Du Z, Wang L, Cauchemez S, Xu X, Wang X, Cowling BJ, Meyers LA, , Risk for Transportation of 2019 Novel Coronavirus (COVID-19) from Wuhan to Cities in China., medRxiv 2020 Feb; (): .

Pellis L, Cauchemez S, Ferguson NM, Fraser C, , Systematic selection between age and household structure for models aimed at emerging epidemic predictions., Nat Commun 2020 02; 11(1): 906.

Sow A, Nikolay B, Faye O, Cauchemez S, Cano J, Diallo M, Faye O, Sadio B, Ndiaye O, Weaver SC, Dia AT, Sall AA, Malvy D, , Changes in the Transmission Dynamic of Chikungunya Virus in Southeastern Senegal., Viruses 2020 02; 12(2): .

Bastard J, Andraud M, Chauvin C, Glaser P, Opatowski L, Temime L, Dynamics of livestock-associated methicillin resistant Staphylococcus aureus in pig movement networks: Insight from mathematical modeling and French data, Epidemics 2020 Feb;31:100389.

Capai L, Hozé N, Chiaroni J, Gross S, Djoudi R, Charrel R, Izopet J, Bosseur F, Priet S, Cauchemez S, de Lamballerie X, Falchi A, Gallian P, Seroprevalence of hepatitis E virus among blood donors on Corsica, France, 2017, Euro Surveill 2020 Feb; 25(5): .

Williams AH, Wheeler R, Deghmane AE, Santecchia I, Schaub RE, Hicham S, Moya Nilges M, Malosse C, Chamot-Rooke J, Haouz A, Dillard JP, Robins WP, Taha MK, Gomperts Boneca I, Defective lytic transglycosylase disrupts cell morphogenesis by hindering cell wall de-O-acetylation in Neisseria meningitidis., Elife 2020 Feb; 9(): .

Bottai D, Frigui W, Sayes F, Di Luca M, Spadoni D, Pawlik A, Zoppo M, Orgeur M, Khanna V, Hardy D, Mangenot S, Barbe V, Medigue C, Ma L, Bouchier C, Tavanti A, Larrouy-Maumus G, Brosch R, TbD1 deletion as a driver of the evolutionary success of modern epidemic Mycobacterium tuberculosis lineages, Nat Commun 2020 Feb;11(1):684.

Matet A, Le Flèche-Matéos A, Doz F, Dureau P, Cassoux N, Ocular Spiroplasma ixodetis in Newborns, France., Emerg Infect Dis 2020 Feb; 26(2): 340-344.

Alexandre Matet, Anne Le Fleche-Mateos, Francois Doz, Pascal Dureau, Nathalie Cassoux, Ocular Spiroplasma Ixodetis in Newborns, France, Emerging Infectious Diseases, 2020, 26 (2), pp.340-344. ⟨10.3201/eid2602.191097⟩.

Miro E, Rossen JWA, Chlebowicz MA, Harmsen D, Brisse S, Passet V, Navarro F, Friedrich AW, García-Cobos S, , Core/Whole Genome Multilocus Sequence Typing and Core Genome SNP-Based Typing of OXA-48-Producing Klebsiella pneumoniae Clinical Isolates From Spain., Front Microbiol 2019 ; 10(): 2961.

Hellert J, Buchrieser J, Larrous F, Minola A, de Melo GD, Soriaga L, England P, Haouz A, Telenti A, Schwartz O, Corti D, Bourhy H, Rey FA, , Structure of the prefusion-locking broadly neutralizing antibody RVC20 bound to the rabies virus glycoprotein., Nat Commun 2020 01; 11(1): 596.

Wong A, Opinel A, Combes SJ, Toubiana J, Brisse S, Determining Factors for Pertussis Vaccination Policy: A Study in Five EU Countries, Vaccines (Basel) 2020 Jan;8(1).

Mohamed Z, Al-Kurdi D, Nelson M, Shimakawa Y, Selvapatt N, Lacey J, Thursz MR, Lemoine M, Brown AS, , Time matters: Point of care screening and streamlined linkage to care dramatically improves hepatitis C treatment uptake in prisoners in England., Int J Drug Policy 2020 Jan; 75(): 102608.

O'Brien DP, Hourdel V, Chenal A, Brier S, Hydrogen/Deuterium Exchange Mass Spectrometry for the Structural Analysis of Detergent-Solubilized Membrane Proteins., Methods Mol Biol 2020 ; 2127(): 339-358.

Besson B, Basset J, Gatellier S, Chabrolles H, Chaze T, Hourdel V, Matondo M, Pardigon N, Choumet V, Comparison of a human neuronal model proteome upon Japanese encephalitis or West Nile Virus infection and potential role of mosquito saliva in neuropathogenesis., PLoS One 2020 ; 15(5): e0232585.

Zhou Z, Alikhan NF, Mohamed K, Fan Y, , Achtman M, , The EnteroBase user’s guide, with case studies on Salmonella transmissions, Yersinia pestis phylogeny, and Escherichia core genomic diversity., Genome Res. 2020 01; 30(1): 138-152.

Topaz N, Caugant DA, Taha MK, Brynildsrud OB, Debech N, Hong E, Deghmane AE, Ouédraogo R, Ousmane S, Gamougame K, Njanpop-Lafourcade BM, Diarra S, Fox LM, Wang X, , Corrigendum to “Phylogenetic relationships and regional spread of meningococcal strains in the meningitis belt, 2011-2016” EBioMedicine 41 (2019) 488-496., EBioMedicine 2020 01; 51(): 102564.

Nguyen TA, Tran TH, Nguyen BT, Pham TTP, Hong Le NT, Ta DV, Phan HTT, Nguyen LH, Ait-Ahmed M, Ho HT, Taieb F, Madec Y, Feasibility of dried blood spots for HIV viral load monitoring in decentralized area in North Vietnam in a test-and-treat era, the MOVIDA project., PLoS One 2020 ; 15(4): e0230968.

Benjelloun F, Quillay H, Cannou C, Marlin R, Madec Y, Fernandez H, Chrétien F, Le Grand R, Barré-Sinoussi F, Nugeyre MT, Menu E, , Activation of Toll-Like Receptors Differentially Modulates Inflammation in the Human Reproductive Tract: Preliminary Findings., Front Immunol 2020 ; 11(): 1655.

Hourdel V, Kwasiborski A, Balière C, Matheus S, Batéjat CF, Manuguerra JC, Vanhomwegen J, Caro V, Rapid Genomic Characterization of SARS-CoV-2 by Direct Amplicon-Based Sequencing Through Comparison of MinION and Illumina iSeq100TM System., Front Microbiol 2020 ; 11(): 571328.

Labadie T, Batéjat C, Leclercq I, Manuguerra JC, , Historical Discoveries on Viruses in the Environment and Their Impact on Public Health., Intervirology 2020 ; 63(1-6): 17-32.

LeMasters K, Dussault J, Barrington C, Bengtson A, Gaynes B, Go V, Hosseinipour MC, Kulisewa K, Kutengule A, Meltzer-Brody S, Midiani D, Mphonda S, Udedi M, Pence B, “Pain in my heart”: Understanding perinatal depression among women living with HIV in Malawi., PLoS One 2020 ; 15(6): e0227935.

Frank T, Gil-Cuesta J, Mbecko JR, Sanke H, Lakis C, Flèche-Matéos AL, Berlioz-Arthaud A, First cases of Burkholderia cenocepacia IIIA neonatal sepsis in Central African Republic., Pan Afr Med J 2020 ; 36(): 330.

Cantaert T, Borand L, Kergoat L, Leng C, Ung S, In S, Peng Y, Phoeun C, Hing C, Taing CN, Saman M, Ong S, Mey C, Choeung R, Ly S, Dussart P, Bourhy H, Tarantola A, , A 1-week intradermal dose-sparing regimen for rabies post-exposure prophylaxis (RESIST-2): an observational cohort study., Lancet Infect Dis 2019 Dec; 19(12): 1355-1362.

Van Steenwinckel J, Schang AL, Krishnan ML, Degos V, Delahaye-Duriez A, Bokobza C, Csaba Z, Verdonk F, Montané A, Sigaut S, Hennebert O, Lebon S, Schwendimann L, Le Charpentier T, Hassan-Abdi R, Ball G, Aljabar P, Saxena A, Holloway RK, Birchmeier W, Baud O, Rowitch D, Miron V, Chretien F, Leconte C, Besson VC, Petretto EG, Edwards AD, Hagberg H, Soussi-Yanicostas N, Fleiss B, Gressens P, Decreased microglial Wnt/β-catenin signalling drives microglial pro-inflammatory activation in the developing brain, Brain 2019 Dec;142(12):3806-3833.

Breurec S, Reynaud Y, Frank T, Farra A, Costilhes G, Weill FX, Le Hello S, , Serotype distribution and antimicrobial resistance of human Salmonella enterica in Bangui, Central African Republic, from 2004 to 2013., PLoS Negl Trop Dis 2019 12; 13(12): e0007917.

Thompson RN, Stockwin JE, van Gaalen RD, Polonsky JA, Kamvar ZN, Demarsh PA, Dahlqwist E, Li S, Miguel E, Jombart T, Lessler J, Cauchemez S, Cori A, , Improved inference of time-varying reproduction numbers during infectious disease outbreaks., Epidemics 2019 12; 29(): 100356.

Cousien A, Ledien J, Souv K, Leang R, Huy R, Fontenille D, Ly S, Duong V, Dussart P, Piola P, Cauchemez S, Tarantola A, , Predicting Dengue Outbreaks in Cambodia., Emerg Infect Dis 2019 12; 25(12): 2281-2283.

Mohamed Z, Mbwambo J, Rwegasha J, Mgina N, Doulla B, Mwakale P, Tuaillon E, Chevaliez S, Shimakawa Y, Taylor-Robinson SD, Thursz MR, Brown AS, Lemoine M, , In-field evaluation of Xpert® HCV viral load Fingerstick assay in people who inject drugs in Tanzania., Liver Int 2020 Mar; 40(3): 514-521.

Hossain MA, Larrous F, Rawlinson SM, Zhan J, Sethi A, Ibrahim Y, Aloi M, Lieu KG, Mok YF, Griffin MDW, Ito N, Ose T, Bourhy H, Moseley GW, Gooley PR, Structural Elucidation of Viral Antagonism of Innate Immunity at the STAT1 Interface, Cell Rep 2019 Nov;29(7):1934-1945.e8.

Mughini-Gras L, Kooh P, Fravalo P, Augustin JC, Guillier L, David J, Thébault A, Carlin F, Leclercq A, Jourdan-Da-Silva N, Pavio N, Villena I, Sanaa M, Watier L, , Critical Orientation in the Jungle of Currently Available Methods and Types of Data for Source Attribution of Foodborne Diseases., Front Microbiol 2019 ; 10(): 2578.

Nayagam S, Shimakawa Y, Lemoine M, , Mother-to-child transmission of hepatitis B: What more needs to be done to eliminate it around the world?, J Viral Hepat 2020 Apr; 27(4): 342-349.

Hoen B, Carpentier M, Gaete S, Tressières B, Herrmann-Storck C, Vingadassalom I, Huc-Anaïs P, Funk AL, Fontanet A, de Lamballerie X, , Kinetics of Anti-Zika Virus Antibodies after Acute Infection in Pregnant Women., J Clin Microbiol 2019 11; 57(11): .

Comandatore F, Sassera D, Bayliss SC, Scaltriti E, Gaiarsa S, Cao X, Gales A, Saito R, Pongolini S, Brisse S, Feil E, Bandi C, Gene composition as a potential barrier to large recombinations in the bacterial pathogen Klebsiella pneumoniae, Genome Biol Evol 2019 Oct;.

Chung The H, Boinett C, Pham Thanh D, Jenkins C, Weill FX, Howden BP, Valcanis M, De Lappe N, Cormican M, Wangchuk S, Bodhidatta L, Mason CJ, Nguyen TNT, Ha Thanh T, Voong VP, Duong VT, Nguyen PHL, Turner P, Wick R, Ceyssens PJ, Thwaites G, Holt KE, Thomson NR, Rabaa MA, Baker S, , Dissecting the molecular evolution of fluoroquinolone-resistant Shigella sonnei., Nat Commun 2019 10; 10(1): 4828.

Laurence Baril, Xavier Vallès, Nils Christian Stenseth, Minoarisoa Rajerison, Maherisoa Ratsitorahina, Javier Pizarro-Cerdá, Christian E. Demeure, Steve Belmain, Holger Scholz, Romain Girod, Joseph Hinnebusch, Inès Vigan-Womas, Eric Bertherat, Arnaud Fontanet, Yazdan Yazadanpanah, Guia Carrara, Jane Lynda Deuve, Eric d'Ortenzio, Jose Oswaldo Cabanillas Angulo, Paul Mead, Peter W Horby, Can we make human plague history? A call to action, BMJ Global Health, 2019, 4 (6), pp.e001984. ⟨10.1136/bmjgh-2019-001984⟩.

Rodrigues C, Passet V, Rakotondrasoa A, Diallo TA, Criscuolo A, Brisse S, , Erratum to “Description of Klebsiella africanensis sp. nov., Klebsiella variicola subsp. tropicalensis subsp. nov. and Klebsiella variicola subsp. variicola subsp. nov.” [Res Microbiol 170 (3) (2019) 165-170]., Res Microbiol ; 170(6-7): 300.

Savin C, Criscuolo A, Guglielmini J, Le Guern AS, Carniel E, Pizarro-Cerdá J, Brisse S, Genus-wide Yersinia core-genome multilocus sequence typing for species identification and strain characterization, Microb Genom 2019 Oct;.

Shimakawa Y, Boucheron P, Luong Nguyen LB, Lemoine M, Sombié R, , Performance of two simplified HBV treatment criteria (TREAT-B score and WHO guidelines) in Burkina Faso, West Africa., J Hepatol 2019 Oct; 71(4): 842-844.

Courtejoie N, Cauchemez S, Zanella G, Durand B, , A network-based approach to modelling bluetongue spread in France., Prev Vet Med 2019 Oct; 170(): 104744.

Hardy D, Fefeu M, Besnard A, Briand D, Gasse P, Arenzana-Seisdedos F, Rocheteau P & Chrétien F, Defective angiogenesis in CXCL12 mutant mice impairs skeletal muscle regeneration, https://skeletalmusclejournal.biomedcentral.com/articles/10.1186/s13395-019-0210-5.

Dellicour S, Troupin C, Jahanbakhsh F, Salama A, Massoudi S, Moghaddam MK, Baele G, Lemey P, Gholami A, Bourhy H, Using phylogeographic approaches to analyse the dispersal history, velocity and direction of viral lineages – Application to rabies virus spread in Iran, Mol. Ecol. 2019 Sep;28(18):4335-4350.

Chabanne R, Fernandez-Canal C, Degos V, Lukaszewicz AC, Velly L, Mrozek S, Perrigault PF, Molliex S, Tavernier B, Dahyot-Fizelier C, Verdonk F, Caumon E, Masgrau A, Begard M, Chabert E, Ferrier A, Jaber S, Bazin JE, Pereira B, Futier E, , Sedation versus general anaesthesia in endovascular therapy for anterior circulation acute ischaemic stroke: the multicentre randomised controlled AMETIS trial study protocol, BMJ Open 2019 Sep;9(9):e027561.

Badell E, Guillot S, Tulliez M, Pascal M, Panunzi LG, Rose S, Litt D, Fry NK, Brisse S, Improved quadruplex real-time PCR assay for the diagnosis of diphtheria, J. Med. Microbiol. 2019 Sep;.

Ben Fraj I, Bouchez V, Smaoui H, Kechrid A, Brisse S, , Genome characteristics of Bordetella pertussis isolates from Tunisia., J. Med. Microbiol. 2019 Sep; 68(9): 1320-1323.

Pouzol S, Tanmoy AM, Ahmed D, Khanam F, Brooks WA, Bhuyan GS, Fabre L, Bryant JE, Gustin MP, Vanhems P, Carman B, Weill FX, Qadri F, Saha S, Endtz H, , Clinical Evaluation of a Multiplex PCR for the Detection of Salmonella enterica Serovars Typhi and Paratyphi A from Blood Specimens in a High-Endemic Setting., Am. J. Trop. Med. Hyg. 2019 09; 101(3): 513-520.

Pulford CV, Perez-Sepulveda BM, Rodwell EV, Weill FX, Baker KS, Hinton JCD, , Salmonella enterica Serovar Panama, an Understudied Serovar Responsible for Extraintestinal Salmonellosis Worldwide., Infect. Immun. 2019 09; 87(9): .

Donnelly CA, Malik MR, Elkholy A, Cauchemez S, Van Kerkhove MD, , Worldwide Reduction in MERS Cases and Deaths since 2016., Emerg Infect Dis 2019 09; 25(9): 1758-1760.

Andronico A, Courcoul A, Bronner A, Scoizec A, Lebouquin-Leneveu S, Guinat C, Paul MC, Durand B, Cauchemez S, , Highly pathogenic avian influenza H5N8 in south-west France 2016-2017: A modeling study of control strategies., Epidemics 2019 09; 28(): 100340.

Hommel B, Sturny-Leclère A, Volant S, Veluppillai N, Duchateau M, Yu CH, Hourdel V, Varet H, Matondo M, Perfect JR, Casadevall A, Dromer F, Alanio A, Correction: Cryptococcus neoformans resists to drastic conditions by switching to viable but non-culturable cell phenotype., PLoS Pathog 2019 Sep; 15(9): e1008070.

Rabenandrasana MAN, Rafetrarivony LF, Rivoarilala LO, Enouf V, Robinson AL, Rakotozanany A, Vanhomwegen J, Caro V, Von Platen C, Manuguerra JC, Collard JM, Draft Genome Sequence of a Chryseobacterium indologenes Strain Isolated from a Blood Culture of a Hospitalized Child in Antananarivo, Madagascar., Microbiol Resour Announc 2019 Aug; 8(35): .

Dacheux L, Dommergues L, Chouanibou Y, Doméon L, Schuler C, Bonas S, Luo D, Maufrais C, Cetre-Sossah C, Cardinale E, Bourhy H, Métras R, Co-circulation and characterization of novel African arboviruses (genus Ephemerovirus) in cattle, Mayotte island, Indian Ocean, 2017, Transbound Emerg Dis 2019 Nov;66(6):2601-2604.

Sonthonnax F, Besson B, Bonnaud E, Jouvion G, Merino D, Larrous F, Bourhy H, Lyssavirus matrix protein cooperates with phosphoprotein to modulate the Jak-Stat pathway, Sci Rep 2019 Aug;9(1):12171.

Mongardon N, Bouglé A, Sola C, Bouroche G, Verdonk F, Le Gall A, Bataille A, Beylacq L, Bourgeois E, Charbit J, Guerci P, Chousterman BG, , Publication outcome of abstracts presented at an Anesthesiology and Critical Care Medicine meeting: Does being a junior presenter matter?, J Clin Anesth 2019 Aug;60:49-50.

Flamand C, Bailly S, Fritzell C, Berthelot L, Vanhomwegen J, Salje H, Paireau J, Matheus S, Enfissi A, Fernandes-Pellerin S, Djossou F, Linares S, Carod JF, Kazanji M, Manuguerra JC, Cauchemez S, Rousset D, , Impact of Zika Virus Emergence in French Guiana: A Large General Population Seroprevalence Survey., J Infect Dis 2019 11; 220(12): 1915-1925.

Maury MM, Bracq-Dieye H, Huang L, Vales G, Lavina M, Thouvenot P, Disson O, Leclercq A, Brisse S, Lecuit M, , Author Correction: Hypervirulent Listeria monocytogenes clones’ adaptation to mammalian gut accounts for their association with dairy products., Nat Commun 2019 Aug; 10(1): 3619.

Alari A, Cheysson F, Le Fouler L, Lanotte P, , Varon E, Opatowski L, Guillemot D, Watier L, Association of Pneumococcal Conjugate Vaccine Coverage With Pneumococcal Meningitis: An Analysis of French Administrative Areas, 2001-2016, Am. J. Epidemiol. 2019 Aug;188(8):1466-1474.

Criscuolo A, Issenhuth-Jeanjean S, Didelot X, Thorell K, Hale J, Parkhill J, Thomson NR, Weill FX, Falush D, Brisse S, , The speciation and hybridization history of the genus Salmonella., Microb Genom 2019 08; 5(8): .

Besombes C, Gonofio E, Konamna X, Selekon B, Grant R, Gessain A, Berthet N, Manuguerra JC, Fontanet A, Nakouné E, Intrafamily Transmission of Monkeypox Virus, Central African Republic, 2018., Emerg Infect Dis 2019 Aug; 25(8): 1602-1604.

C Joron, B Roméo, Anne Le Fleche-Mateos, C Rames, Y El Samad, F Hamdad, Dermacoccus Nishinomiyaensis as a Cause of Persistent Paediatric Catheter-Related Bacteraemia, Clinical Microbiology and Infection, 2019, 25 (8), pp.1054-1055. ⟨10.1016/j.cmi.2019.02.023⟩.

Brehony C, McGrath E, Brennan W, Tuohy A, Whyte T, Brisse S, Maiden M, Jolley K, Morris D, Cormican M, , An MLST approach to support tracking of plasmids carrying OXA-48-like carbapenemase., J. Antimicrob. Chemother. 2019 07; 74(7): 1856-1862.

Ly S, Fortas C, Duong V, Benmarhnia T, Sakuntabhai A, Paul R, Huy R, Sorn S, Nguon K, Chan S, Kimsan S, Ong S, Kim KS, Buoy S, Voeung L, Dussart P, Buchy P, Tarantola A, , Asymptomatic Dengue Virus Infections, Cambodia, 2012-2013., Emerg Infect Dis 2019 07; 25(7): 1354-1362.

Hommel B, Sturny-Leclère A, Volant S, Veluppillai N, Duchateau M, Yu CH, Hourdel V, Varet H, Matondo M, Perfect JR, Casadevall A, Dromer F, Alanio A, Cryptococcus neoformans resists to drastic conditions by switching to viable but non-culturable cell phenotype., PLoS Pathog 2019 Jul; 15(7): e1007945.

Hawkey J, Le Hello S, Doublet B, Granier SA, Hendriksen RS, Fricke WF, Ceyssens PJ, Gomart C, Billman-Jacobe H, Holt KE, Weill FX, , Global phylogenomics of multidrug-resistant Salmonella enterica serotype Kentucky ST198., Microb Genom 2019 07; 5(7): .

Deghmane AE, Hong E, Chehboub S, Terrade A, Falguières M, Sort M, Harrison O, Jolley KA, Taha MK, , High diversity of invasive Haemophilus influenzae isolates in France and the emergence of resistance to third generation cephalosporins by alteration of ftsI gene., J Infect 2019 07; 79(1): 7-14.

Cousien A, Abel S, Monthieux A, Andronico A, Calmont I, Cervantes M, Césaire R, Gallian P, de Lamballerie X, Laouénan C, Najioullah F, Pierre-François S, Pircher M, Salje H, Ten Bosch QA, Cabié A, Cauchemez S, , Assessing Zika Virus Transmission Within Households During an Outbreak in Martinique, 2015-2016., Am J Epidemiol 2019 07; 188(7): 1389-1396.

Mahon BM, Brehony C, Cahill N, McGrath E, O'Connor L, Varley A, Cormican M, Ryan S, Hickey P, Keane S, Mulligan M, Ruane B, Jolley KA, Maiden MC, Brisse S, Morris D, Detection of OXA-48-like-producing Enterobacterales in Irish recreational water, Sci. Total Environ. 2019 Nov;690:1-6.

Verdonk F, Petit AC, Abdel-Ahad P, Vinckier F, Jouvion G, de Maricourt P, De Medeiros GF, Danckaert A, Van Steenwinckel J, Blatzer M, Maignan A, Langeron O, Sharshar T, Callebert J, Launay JM, Chrétien F, Gaillard R., Microglial production of quinolinic acid as a target and a biomarker of the antidepressant effect of ketamine., Brain Behav Immun. 2019 Jun 28.

Bouglé A, Rocheteau P, Briand D, Hardy D, Verdonk F, Tremolada C, Hivelin M, Chretien F, Beneficial role of adipose-derived mesenchymal stem cells from micro-fragmented fat in a murine model of Duchenne Muscular Dystrophy., Muscle Nerve. 2019 Jun 22. doi: 10.1002/mus.26614.

Bonnaud EM, Troupin C, Dacheux L, Holmes EC, Monchatre-Leroy E, Tanguy M, Bouchier C, Cliquet F, Barrat J, Bourhy H, Comparison of intra- and inter-host genetic diversity in rabies virus during experimental cross-species transmission, PLoS Pathog. 2019 06;15(6):e1007799.

Maury MM, Bracq-Dieye H, Huang L, Vales G, Lavina M, Thouvenot P, Disson O, Leclercq A, Brisse S, Lecuit M, , Hypervirulent Listeria monocytogenes clones’ adaption to mammalian gut accounts for their association with dairy products., Nat Commun 2019 Jun; 10(1): 2488.

Touat M, Opatowski M, Brun-Buisson C, Cosker K, Guillemot D, Salomon J, Tuppin P, de Lagasnerie G, Watier L, A Payer Perspective of the Hospital Inpatient Additional Care Costs of Antimicrobial Resistance in France: A Matched Case-Control Study, Appl Health Econ Health Policy 2019 Jun;17(3):381-389.

Bonneault M, Andrianoelina VH, Herindrainy P, Rabenandrasana MAN, Garin B, Breurec S, Delarocque-Astagneau E, Guillemot D, Andrianirina ZZ, Collard JM, Huynh BT, Opatowski L, Transmission Routes of Extended-Spectrum Beta-Lactamase-Producing Enterobacteriaceae in a Neonatology Ward in Madagascar., Am J Trop Med Hyg 2019 Jun; 100(6): 1355-1362.

De Benedictis P, Bourhy H, Echevarría JE, Fooks AR, Freuling C, Serra-Cobo J, Müller T, Comments to “Detection and phylogenetic characterization of astroviruses in insectivorous bats from Central-Southern Italy”, Zoonoses Public Health 2019 06;66(4):355-358.

Matheus S, Talla C, Labeau B, de Laval F, Briolant S, Berthelot L, Vray M, Rousset D, , Performance of 2 Commercial Serologic Tests for Diagnosing Zika Virus Infection., Emerg Infect Dis 2019 06; 25(6): 1153-1160.

M. Imran, N. Desmasures, M. Coton, Anne Le Fleche-Mateos, F. Irlinger, C. Delbès-Paus, V. Stahl, M. Montel, Jean-Paul Vernoux, Safety assessment of Gram-negative bacteria associated with traditional French cheeses, Food Microbiology, 2019, 79, pp.1-10. ⟨10.1016/j.fm.2018.11.001⟩.

Duval A, Obadia T, Boëlle PY, Fleury E, Herrmann JL, Guillemot D, Temime L, Opatowski L, , Close proximity interactions support transmission of ESBL-K. pneumoniae but not ESBL-E. coli in healthcare settings, PLoS Comput. Biol. 2019 05;15(5):e1006496.

Besson B, Kim S, Kim T, Ko Y, Lee S, Larrous F, Song J, Shum D, Grailhe R, Bourhy H, Kinome-Wide RNA Interference Screening Identifies Mitogen-Activated Protein Kinases and Phosphatidylinositol Metabolism as Key Factors for Rabies Virus Infection, mSphere 2019 05;4(3).

Pinotti F, Fleury É, Guillemot D, Böelle PY, Poletto C, Host contact dynamics shapes richness and dominance of pathogen strains, PLoS Comput. Biol. 2019 May;15(5):e1006530.

Shimakawa Y, Ndow G, Njie R, Njai HF, Takahashi K, Akbar SMF, Cohen D, Nayagam S, Jeng A, Ceesay A, Sanneh B, Baldeh I, Imaizumi M, Moriyama K, Aoyagi K, D'Alessandro U, Mishiro S, Chemin I, Mendy M, Thursz MR, Lemoine M, , Hepatitis B Core-related Antigen: An Alternative to Hepatitis B Virus DNA to Assess Treatment Eligibility in Africa., Clin Infect Dis 2020 Mar; 70(7): 1442-1452.

Amato KR, Maurice CF, Guillemin K, Giles-Vernick T, Multidisciplinarity in Microbiome Research: A Challenge and Opportunity to Rethink Causation, Variability, and Scale, Bioessays 2019 May;:e1900007.

Courtejoie N, Bournez L, Zanella G, Durand B, Quantifying bluetongue vertical transmission in French cattle from surveillance data, Vet. Res. 2019 May;50(1):34.

Bernard-Stoecklin S, Nikolay B, Assiri A, Bin Saeed AA, Ben Embarek PK, El Bushra H, Ki M, Malik MR, Fontanet A, Cauchemez S, Van Kerkhove MD, , Comparative Analysis of Eleven Healthcare-Associated Outbreaks of Middle East Respiratory Syndrome Coronavirus (Mers-Cov) from 2015 to 2017., Sci Rep 2019 05; 9(1): 7385.

Nikolay B, Salje H, Hossain MJ, Khan AKMD, Sazzad HMS, Rahman M, Daszak P, Ströher U, Pulliam JRC, Kilpatrick AM, Nichol ST, Klena JD, Sultana S, Afroj S, Luby SP, Cauchemez S, Gurley ES, , Transmission of Nipah Virus – 14 Years of Investigations in Bangladesh., N Engl J Med 2019 05; 380(19): 1804-1814.

Thiry D, Passet V, Danis-Wlodarczyk K, Lood C, Wagemans J, De Sordi L, van Noort V, Dufour N, Debarbieux L, Mainil JG, Brisse S, Lavigne R, , New Bacteriophages against Emerging Lineages ST23 and ST258 of Klebsiella pneumoniae and Efficacy Assessment in Galleria mellonella Larvae., Viruses 2019 05; 11(5): .

Gaiarsa S, Batisti Biffignandi G, Esposito EP, Castelli M, Jolley KA, Brisse S, Sassera D, Zarrilli R, , Comparative Analysis of the Two Acinetobacter baumannii Multilocus Sequence Typing (MLST) Schemes., Front Microbiol 2019 ; 10(): 930.

Giles-Vernick T, Kutalek R, Napier D, Kaawa-Mafigiri D, Dückers M, Paget J, Ahmed SM, Cheah PY, Desclaux A, De Vries D, Hardon A, MacGregor H, Pell C, Rashid SF, Rodyna R, Schultsz C, Sow K, Wilkinson A, A new social sciences network for infectious threats, Lancet Infect Dis 2019 May;19(5):461-463.

Cohen D, Shimakawa Y, Ndow G, Sow A, Tamba S, Njie R, Lo G, Ghosh S, Toure-Kane C, Ka M, Mboup S, Okeke E, Toure S, Diop M, D'Alessandro U, Taylor-Robinson S, Mendy M, Zoulim F, Thursz MR, Lemoine M, Chemin I, , [Prevention of liver fibrosis and liver cancer linked to hepatitis B virus in Africa: the Prolifica study]., Med Sci (Paris) 2019 May; 35(5): 431-439.

Kraemer MUG, Reiner RC, Brady OJ, Messina JP, Gilbert M, Pigott DM, Yi D, Johnson K, Earl L, Marczak LB, Shirude S, Weaver ND, Bisanzio D, Perkins TA, Lai S, Lu X, Jones P, Coelho GE, Carvalho RG, Van Bortel W, Marsboom C, Hendrickx G, Schaffner F, Moore CG, Nax HH, Bengtsson L, Wetter E, Tatem AJ, Brownstein JS, Smith DL, Lambrechts L, Cauchemez S, Linard C, Faria NR, Pybus OG, Scott TW, Liu Q, Yu H, Wint GRW, Hay SI, Golding N, , Publisher Correction: Past and future spread of the arbovirus vectors Aedes aegypti and Aedes albopictus., Nat Microbiol 2019 May; 4(5): 901.

Kraemer MUG, Reiner RC, Brady OJ, Messina JP, Gilbert M, Pigott DM, Yi D, Johnson K, Earl L, Marczak LB, Shirude S, Weaver ND, Bisanzio D, Perkins TA, Lai S, Lu X, Jones P, Coelho GE, Carvalho RG, Van Bortel W, Marsboom C, Hendrickx G, Schaffner F, Moore CG, Nax HH, Bengtsson L, Wetter E, Tatem AJ, Brownstein JS, Smith DL, Lambrechts L, Cauchemez S, Linard C, Faria NR, Pybus OG, Scott TW, Liu Q, Yu H, Wint GRW, Hay SI, Golding N, , Publisher Correction: Past and future spread of the arbovirus vectors Aedes aegypti and Aedes albopictus., Nat Microbiol 2019 May; 4(5): 900.

Ribeiro TG, Novais Â, Rodrigues C, Nascimento R, Freitas F, Machado E, Peixe L, , Dynamics of clonal and plasmid backgrounds of Enterobacteriaceae producing acquired AmpC in Portuguese clinical settings over time., Int J Antimicrob Agents 2019 May; 53(5): 650-656.

Galmiche S, Buob D, Fellahi S, Bastard JP, Grateau G, Georgin-Lavialle S, , Rheumatoid arthritis revealed by polyadenopathy, diarrhea and digestive AA amyloidosis., Joint Bone Spine 2019 05; 86(3): 397-398.

Pivot D, Fanton A, Badell-Ocando E, Benouachkou M, Astruc K, Huet F, Amoureux L, Neuwirth C, Criscuolo A, Aho S, Toubiana J, Brisse S, Carriage of a Single Strain of Nontoxigenic Corynebacterium diphtheriae bv. Belfanti (Corynebacterium belfantii) in Four Patients with Cystic Fibrosis, J. Clin. Microbiol. 2019 May;57(5).

Yoshida K, Post G, Shimakawa Y, Thursz M, Brown A, Ingiliz P, Lemoine M, , Clinical utility of TREAT-B score in African and non-African HBV-infected patients living in Europe., J Hepatol 2019 Jun; 70(6): 1295-1297.

Vray M, Hedible BG, Adam P, Tondeur L, Manirazika A, Randremanana R, Mainassara H, Briend A, Artaud C, von Platen C, Altmann M, Jambou R, , Correction to: A multicenter, randomized controlled comparison of three renutrition strategies for the management of moderate acute malnutrition among children aged from 6 to 24 months (the MALINEA project)., Trials 2019 04; 20(1): 211.

Post G, Shalev N, Baumgarten A, Shimakawa Y, Lemoine M, Krznaric I, Dupke S, Carganico A, Arastéh K, Ingiliz P, , Indication for treatment and severity of disease in treatment-naive patients with chronic hepatitis B virus infection., Eur J Gastroenterol Hepatol 2019 Jun; 31(6): 723-728.

Cahill N, O'Connor L, Mahon B, Varley Á, McGrath E, Ryan P, Cormican M, Brehony C, Jolley KA, Maiden MC, Brisse S, Morris D, Hospital effluent: A reservoir for carbapenemase-producing Enterobacterales?, Sci. Total Environ. 2019 Apr;672:618-624.

Guglielmini J, Bourhy P, Schiettekatte O, Zinini F, Brisse S, Picardeau M, , Genus-wide Leptospira core genome multilocus sequence typing for strain taxonomy and global surveillance., PLoS Negl Trop Dis 2019 04; 13(4): e0007374.

Parize P, Dacheux L, Bourhy H, [Rabies], Rev Prat 2019 Apr;69(4):423-428.

Mueller JE, , Meningococcal strain evolution, dusty dry air and respiratory tract infections: An explosive relationship., EBioMedicine 2019 04; 42(): 34-35.

Churakov M, Villabona-Arenas CJ, Kraemer MUG, Salje H, Cauchemez S, , Spatio-temporal dynamics of dengue in Brazil: Seasonal travelling waves and determinants of regional synchrony., PLoS Negl Trop Dis 2019 04; 13(4): e0007012.

Sadeuh-Mba SA, Yonga MG, Els M, Batejat C, Eyangoh S, Caro V, Etoundi A, Carniel E, Njouom R, , Monkeypox virus phylogenetic similarities between a human case detected in Cameroon in 2018 and the 2017-2018 outbreak in Nigeria., Infect Genet Evol 2019 04; 69(): 8-11.

Cooper LV, Robson A, Trotter CL, Aseffa A, Collard JM, Daugla DM, Diallo A, Hodgson A, Jusot JF, Omotara B, Sow S, Hassan-King M, Manigart O, Nascimento M, Woukeu A, Chandramohan D, Borrow R, Maiden MCJ, Greenwood B, Stuart JM, Risk factors for acquisition of meningococcal carriage in the African meningitis belt., Trop Med Int Health 2019 Apr; 24(4): 392-400.

Randremanana R, Andrianaivoarimanana V, Nikolay B, Ramasindrazana B, Paireau J, Ten Bosch QA, Rakotondramanga JM, Rahajandraibe S, Rahelinirina S, Rakotomanana F, Rakotoarimanana FM, Randriamampionona LB, Razafimbia V, De Dieu Randria MJ, Raberahona M, Mikaty G, Le Guern AS, Rakotonjanabelo LA, Ndiaye CF, Rasolofo V, Bertherat E, Ratsitorahina M, Cauchemez S, Baril L, Spiegel A, Rajerison M, , Epidemiological characteristics of an urban plague epidemic in Madagascar, August-November, 2017: an outbreak report., Lancet Infect Dis 2019 05; 19(5): 537-545.

Taylor E, Banyard AC, Bourhy H, Cliquet F, Ertl H, Fehlner-Gardiner C, Horton DL, Mani RS, Müller T, Rupprecht CE, Schnell MJ, Del Rio Vilas V, Fooks AR, Avoiding preventable deaths: The scourge of counterfeit rabies vaccines, Vaccine 2019 Apr;37(17):2285-2287.

Toubiana J, Azarnoush S, Bouchez V, Landier A, Guillot S, Matczak S, Bonacorsi S, Brisse S, , Bordetella parapertussis Bacteremia: Clinical Expression and Bacterial Genomics., Open Forum Infect Dis 2019 Apr; 6(4): ofz122.

Frémeaux-Bacchi V, Sellier-Leclerc AL, Vieira-Martins P, Limou S, Kwon T, Lahoche A, Novo R, Llanas B, Nobili F, Roussey G, Cailliez M, Ulinski T, Deschênes G, Alberti C, Weill FX, Mariani P, Loirat C, , Complement Gene Variants and Shiga Toxin-Producing Escherichia coli-Associated Hemolytic Uremic Syndrome: Retrospective Genetic and Clinical Study., Clin J Am Soc Nephrol 2019 03; 14(3): 364-377.

Kraemer MUG, Reiner RC, Brady OJ, Messina JP, Gilbert M, Pigott DM, Yi D, Johnson K, Earl L, Marczak LB, Shirude S, Davis Weaver N, Bisanzio D, Perkins TA, Lai S, Lu X, Jones P, Coelho GE, Carvalho RG, Van Bortel W, Marsboom C, Hendrickx G, Schaffner F, Moore CG, Nax HH, Bengtsson L, Wetter E, Tatem AJ, Brownstein JS, Smith DL, Lambrechts L, Cauchemez S, Linard C, Faria NR, Pybus OG, Scott TW, Liu Q, Yu H, Wint GRW, Hay SI, Golding N, , Past and future spread of the arbovirus vectors Aedes aegypti and Aedes albopictus., Nat Microbiol 2019 05; 4(5): 854-863.

Topaz N, Caugant DA, Taha MK, Brynildsrud OB, Debech N, Hong E, Deghmane AE, Ouédraogo R, Ousmane S, Gamougame K, Njanpop-Lafourcade BM, Diarra S, Fox LM, Wang X, , Phylogenetic relationships and regional spread of meningococcal strains in the meningitis belt, 2011-2016., EBioMedicine 2019 Mar; 41(): 488-496.

Mueller JE, , Long-term effectiveness of MenAfriVac., Lancet Infect Dis 2019 03; 19(3): 228-229.

Novais Â, Freitas AR, Rodrigues C, Peixe L, , Fourier transform infrared spectroscopy: unlocking fundamentals and prospects for bacterial strain typing., Eur J Clin Microbiol Infect Dis 2019 Mar; 38(3): 427-448.

Ouattara M, Whaley MJ, Jenkins LT, Schwartz SB, Traoré RO, Diarra S, Collard JM, Sacchi CT, Wang X, Triplex real-time PCR assay for the detection of Streptococcus pneumoniae, Neisseria meningitidis and Haemophilus influenzae directly from clinical specimens without extraction of DNA., Diagn Microbiol Infect Dis 2019 Mar; 93(3): 188-190.

Rodrigues C, Passet V, Rakotondrasoa A, Diallo TA, Criscuolo A, Brisse S, , Description of Klebsiella africanensis sp. nov., Klebsiella variicola subsp. tropicalensis subsp. nov. and Klebsiella variicola subsp. variicola subsp. nov., Res Microbiol ; 170(3): 165-170.

Davies C, Graffy R, Shandukani M, Baloyi E, Gast L, Kok G, Mbokazi F, Zita A, Zwane M, Magagula R, Mabuza A, Ramkrishna W, Morris N, Porteous J, Shirreff G, Blumberg L, Misiani E, Moonasar D, Effectiveness of 24-h mobile reporting tool during a malaria outbreak in Mpumalanga Province, South Africa., Malar J 2019 Feb; 18(1): 45.

Ryan MJ, Giles-Vernick T, Graham JE, Technologies of trust in epidemic response: openness, reflexivity and accountability during the 2014-2016 Ebola outbreak in West Africa, BMJ Glob Health 2019;4(1):e001272.

Cauchemez S, Hoze N, Cousien A, Nikolay B, Ten Bosch Q, , How Modelling Can Enhance the Analysis of Imperfect Epidemic Data., Trends Parasitol 2019 05; 35(5): 369-379.

Mohamed Z, Kim JU, Magesa A, Kasubi M, Feldman SF, Chevaliez S, Mwakale P, Taylor-Robinson SD, Thursz MR, Shimakawa Y, Rwegasha J, Lemoine M, , High prevalence and poor linkage to care of transfusion-transmitted infections among blood donors in Dar-es-Salaam, Tanzania., J Viral Hepat 2019 Jun; 26(6): 750-756.

Painset A, Björkman JT, Kiil K, Guillier L, Mariet JF, Félix B, Amar C, Rotariu O, Roussel S, Perez-Reche F, Brisse S, Moura A, Lecuit M, Forbes K, Strachan N, Grant K, Møller-Nielsen E, Dallman TJ, , LiSEQ – whole-genome sequencing of a cross-sectional survey of Listeria monocytogenes in ready-to-eat foods and human clinical cases in Europe., Microb Genom 2019 Feb; 5(2): .

Cooke GS, Andrieux-Meyer I, Applegate TL, Atun R, Burry JR, Cheinquer H, Dusheiko G, Feld JJ, Gore C, Griswold MG, Hamid S, Hellard ME, Hou J, Howell J, Jia J, Kravchenko N, Lazarus JV, Lemoine M, Lesi OA, Maistat L, McMahon BJ, Razavi H, Roberts T, Simmons B, Sonderup MW, Spearman CW, Taylor BE, Thomas DL, Waked I, Ward JW, Wiktor SZ, , , Accelerating the elimination of viral hepatitis: a Lancet Gastroenterology & Hepatology Commission., Lancet Gastroenterol Hepatol 2019 Feb; 4(2): 135-184.

Barkoff AM, Mertsola J, Pierard D, Dalby T, Hoegh SV, Guillot S, Stefanelli P, van Gent M, Berbers G, Vestrheim D, Greve-Isdahl M, Wehlin L, Ljungman M, Fry NK, Markey K, He Q, Pertactin-deficient Bordetella pertussis isolates: evidence of increased circulation in Europe, 1998 to 2015., Euro Surveill 2019 Feb; 24(7): .

Nadimpalli M, Fabre L, Yith V, Sem N, Gouali M, Delarocque-Astagneau E, Sreng N, Le Hello S, CTX-M-55-type ESBL-producing Salmonella enterica are emerging among retail meats in Phnom Penh, Cambodia., J Antimicrob Chemother 2019 Feb; 74(2): 342-348.

Nadimpalli M, Vuthy Y, de Lauzanne A, Fabre L, Criscuolo A, Gouali M, Huynh BT, Naas T, Phe T, Borand L, Jacobs J, Kerléguer A, Piola P, Guillemot D, Le Hello S, Delarocque-Astagneau E, Meat and Fish as Sources of Extended-Spectrum β-Lactamase-Producing Escherichia coli, Cambodia., Emerg Infect Dis 2019 Jan; 25(1): 126-31.

Colombi D, Serra-Cobo J, Métras R, Apolloni A, Poletto C, López-Roig M, Bourhy H, Colizza V, Mechanisms for lyssavirus persistence in non-synanthropic bats in Europe: insights from a modeling study, Sci Rep 2019 Jan;9(1):537.

Haw DJ, Cummings DAT, Lessler J, Salje H, Read JM, Riley S, Differential mobility and local variation in infection attack rate, PLoS Comput. Biol. 2019 01;15(1):e1006600.

Lepuschitz S, Schill S, Stoeger A, Pekard-Amenitsch S, Huhulescu S, Inreiter N, Hartl R, Kerschner H, Sorschag S, Springer B, Brisse S, Allerberger F, Mach RL, Ruppitsch W, Whole genome sequencing reveals resemblance between ESBL-producing and carbapenem resistant Klebsiella pneumoniae isolates from Austrian rivers and clinical isolates from hospitals, Sci. Total Environ. 2019 Jan;662:227-235.

Muzzi A, Brozzi A, Serino L, Bodini M, Abad R, Caugant D, Comanducci M, Lemos AP, Gorla MC, Křížová P, Mikula C, Mulhall R, Nissen M, Nohynek H, Simões MJ, Skoczyńska A, Stefanelli P, Taha MK, Toropainen M, Tzanakaki G, Vadivelu-Pechai K, Watson P, Vazquez JA, Rajam G, Rappuoli R, Borrow R, Medini D, , Genetic Meningococcal Antigen Typing System (gMATS): A genotyping tool that predicts 4CMenB strain coverage worldwide., Vaccine 2019 02; 37(7): 991-1000.

Domenech de Cellès M, Arduin H, Lévy-Bruhl D, Georges S, Souty C, Guillemot D, Watier L, Opatowski L, Unraveling the seasonal epidemiology of pneumococcus, Proc. Natl. Acad. Sci. U.S.A. 2019 01;116(5):1802-1807.

Taha MK, Deghmane AE, Knol M, van der Ende A, Whole genome sequencing reveals Trans-European spread of an epidemic Neisseria meningitidis serogroup W clone, Clin. Microbiol. Infect. 2019 Jan;.

Tsang TK, Fang VJ, Ip DKM, Perera RAPM, So HC, Leung GM, Peiris JSM, Cowling BJ, Cauchemez S, , Indirect protection from vaccinating children against influenza in households., Nat Commun 2019 01; 10(1): 106.

Weill FX, Domman D, Njamkepo E, Almesbahi AA, Naji M, Nasher SS, Rakesh A, Assiri AM, Sharma NC, Kariuki S, Pourshafie MR, Rauzier J, Abubakar A, Carter JY, Wamala JF, Seguin C, Bouchier C, Malliavin T, Bakhshi B, Abulmaali HHN, Kumar D, Njoroge SM, Malik MR, Kiiru J, Luquero FJ, Azman AS, Ramamurthy T, Thomson NR, Quilici ML, , Genomic insights into the 2016-2017 cholera epidemic in Yemen., Nature 2019 01; 565(7738): 230-233.

Mitchell PK, Mier-Y-Teran-Romero L, Biggerstaff BJ, Delorey MJ, Aubry M, Cao-Lormeau VM, Lozier MJ, Cauchemez S, Johansson MA, , Reassessing Serosurvey-Based Estimates of the Symptomatic Proportion of Zika Virus Infections., Am J Epidemiol 2019 01; 188(1): 206-213.

Ung A, Baidjoe AY, Van Cauteren D, Fawal N, Fabre L, Guerrisi C, Danis K, Morand A, Donguy MP, Lucas E, Rossignol L, Lefèvre S, Vignaud ML, Cadel-Six S, Lailler R, Jourdan-Da Silva N, Le Hello S, , Disentangling a complex nationwide Salmonella Dublin outbreak associated with raw-milk cheese consumption, France, 2015 to 2016., Euro Surveill 2019 Jan; 24(3): .

Deghmane AE, Hong E, Taha MK, , Diagnosis of Meningococcal Infection Using Internally Controlled Multiplex Real-Time PCR., Methods Mol Biol 2019 ; 1969(): 17-31.

Merla C, Rodrigues C, Passet V, Corbella M, Thorpe HA, Kallonen TVS, Zong Z, Marone P, Bandi C, Sassera D, Corander J, Feil EJ, Brisse S, , Description of Klebsiella spallanzanii sp. nov. and of Klebsiella pasteurii sp. nov., Front Microbiol 2019 ; 10(): 2360.

Opatowski M, Tuppin P, Cosker K, Touat M, De Lagasnerie G, Guillemot D, Salomon J, Brun-Buisson C, Watier L, Hospitalisations with infections related to antimicrobial-resistant bacteria from the French nationwide hospital discharge database, 2016, Epidemiol. Infect. 2019 Jan;147:e144.

Guyomard-Rabenirina S, Weill FX, Le Hello S, Bastian S, Berger F, Ferdinand S, Legreneur P, Loraux C, Malpote E, Muanza B, Richard V, Talarmin A, Breurec S, , Reptiles in Guadeloupe (French West Indies) are a reservoir of major human Salmonella enterica serovars., PLoS ONE 2019 ; 14(7): e0220145.

Ramamurthy T, Mutreja A, Weill FX, Das B, Ghosh A, Nair GB, , Revisiting the Global Epidemiology of Cholera in Conjuction With the Genomics of Vibrio cholerae., Front Public Health 2019 ; 7(): 203.

Goldschmidt-Clermont PJ, Lemonne JR, Fontanet A, Stevenson M, , Virus Cooperation, ZIKV Viremia and in Utero Fetus Infection., Women Health Care Issues 2019 ; 2(2): .

Obam Mekanda FM, Monamele CG, Simo Nemg FB, Yonga GM, Ouapi D, Penlap Beng V, Batéjat C, Caro V, Manuguerra JC, Demanou M, , Molecular characterization of measles virus strains circulating in Cameroon during the 2013-2016 epidemics., PLoS One 2019 ; 14(9): e0222428.

Simo Tchuinte PL, Rabenandrasana MAN, Kowalewicz C, Andrianoelina VH, Rakotondrasoa A, Andrianirina ZZ, Enouf V, Ratsima EH, Randrianirina F, Collard JM, Phenotypic and molecular characterisations of carbapenem-resistant Acinetobacter baumannii strains isolated in Madagascar., Antimicrob Resist Infect Control 2019 ; 8(): 31.

Thierry Frank, Alain Farra, Pierre-Alain Rubbo, Jean-Robert Mbecko, Hugues Sanke, Anne Le Fleche-Mateos, Jean-Pierre Lombart, Alain Berlioz-Arthaud, Burkholderia cepacia meningitis in the Central African Republic, The Pan African Medical Journal, 2019, 32, pp.12. ⟨10.11604/pamj.2019.32.12.16552⟩.

Frank T, Farra A, Rubbo PA, Mbecko JR, Sanke H, Le Flèche-Matéos A, Lombart JP, Berlioz-Arthaud A, Burkholderia cepacia meningitis in the Central African Republic., Pan Afr Med J 2019 ; 32(): 12.

Sevestre J, Diene SM, Aouiti-Trabelsi M, Deghmane AE, Tournier I, François P, Caron F, Taha MK, , Differential expression of hemoglobin receptor, HmbR, between carriage and invasive isolates of Neisseria meningitidis contributes to virulence: lessons from a clonal outbreak., Virulence 2018 Dec; 9(1): 923-929.

Kesanopoulos K, Bratcher HB, Hong E, Xirogianni A, Papandreou A, Taha MK, Maiden MCJ, Tzanakaki G, Characterization of meningococcal carriage isolates from Greece by whole genome sequencing: Implications for 4CMenB vaccine implementation, PLoS ONE 2018;13(12):e0209919.

Narat V, Kampo M, Heyer T, Rupp S, Ambata P, Njouom R, Giles-Vernick T, Using physical contact heterogeneity and frequency to characterize dynamics of human exposure to nonhuman primate bodily fluids in central Africa, PLoS Negl Trop Dis 2018 12;12(12):e0006976.

Acevedo R, Bai X, Borrow R, Caugant DA, Carlos J, Ceyhan M, Christensen H, Climent Y, De Wals P, Dinleyici EC, Echaniz-Aviles G, Hakawi A, Kamiya H, Karachaliou A, Lucidarme J, Meiring S, Mironov K, Sáfadi MAP, Shao Z, Smith V, Steffen R, Stenmark B, Taha MK, Trotter C, Vázquez JA, Zhu B, , The Global Meningococcal Initiative meeting on prevention of meningococcal disease worldwide: Epidemiology, surveillance, hypervirulent strains, antibiotic resistance and high-risk populations., Expert Rev Vaccines 2019 01; 18(1): 15-30.

Pardo E, El Behi H, Boizeau P, Verdonk F, Alberti C, Lescot T, Reliability of ultrasound measurements of quadriceps muscle thickness in critically ill patients, BMC Anesthesiol 2018 12;18(1):205.

Scheifer C, Rolland-Debord C, Badell E, Reibel F, Aubry A, Perignon A, Patey O, Brisse S, Caumes E, Re-emergence of Corynebacterium diphtheriae, Med Mal Infect 2019 Sep;49(6):463-466.

Domenech de Cellès M, King AA, Rohani P, Response to Comment on “The impact of past vaccination coverage and immunity on pertussis resurgence”, Sci Transl Med 2018 Dec;10(472).

Cori A, Nouvellet P, Garske T, Bourhy H, Nakouné E, Jombart T, A graph-based evidence synthesis approach to detecting outbreak clusters: An application to dog rabies, PLoS Comput. Biol. 2018 12;14(12):e1006554.

Serra-Cobo J, López-Roig M, Lavenir R, Abdelatif E, Boucekkine W, Elharrak M, Harif B, El Ayachi S, Salama AA, Nayel MA, Elsify A, El Rashedy SG, De Benedictis P, Mutinelli F, Zecchin B, Scaravelli D, Balhoul C, Zaghawa A, Hassan HY, Zaghloul AH, Bourhy H, Active sero-survey for European bat lyssavirus type-1 circulation in North African insectivorous bats, Emerg Microbes Infect 2018 Dec;7(1):213.

Ben Fraj I, Kechrid A, Guillot S, Bouchez V, Brisse S, Guiso N, Smaoui H, Pertussis epidemiology in Tunisian infants and children and characterization of Bordetella pertussis isolates: results of a 9-year surveillance study, 2007 to 2016, J. Med. Microbiol. 2019 Feb;68(2):241-247.

Vray M, Hedible BG, Adam P, Tondeur L, Manirazika A, Randremanana R, Mainassara H, Briend A, Artaud C, von Platen C, Altmann M, Jambou R, A multicenter, randomized controlled comparison of three renutrition strategies for the management of moderate acute malnutrition among children aged from 6 to 24 months (the MALINEA project), Trials 2018 Dec;19(1):666.

Leopardi S, Priori P, Zecchin B, Poglayen G, Trevisiol K, Lelli D, Zoppi S, Scicluna MT, D'Avino N, Schiavon E, Bourhy H, Serra-Cobo J, Mutinelli F, Scaravelli D, De Benedictis P, Active and passive surveillance for bat lyssaviruses in Italy revealed serological evidence for their circulation in three bat species, Epidemiol. Infect. 2018 Dec;:1-6.

Darrivere L, Lapidus N, Colignon N, Chafai N, Chaput U, Verdonk F, Paye F, Lescot T, Minimally invasive drainage in critically ill patients with severe necrotizing pancreatitis is associated with better outcomes: an observational study, Crit Care 2018 11;22(1):321.

Cauchemez S, Bourhy H, , Improving the provision of rabies post-exposure prophylaxis., Lancet Infect Dis 2019 01; 19(1): 12-13.

Domenech de Cellès M, King AA, Rohani P, Commentary: resolving pertussis resurgence and vaccine immunity using mathematical transmission models, Hum Vaccin Immunother 2018 Nov;.

Demeure CE, Derbise A, Guillas C, Gerke C, Cauchemez S, Carniel E, Pizarro-Cerdá J, , Humoral and cellular immune correlates of protection against bubonic plague by a live Yersinia pseudotuberculosis vaccine., Vaccine 2019 01; 37(1): 123-129.

Tarantola A, Ly S, Chan M, In S, Peng Y, Hing C, Taing CN, Phoen C, Ly S, Cauchemez S, Buchy P, Dussart P, Bourhy H, Mary JY, , Intradermal rabies post-exposure prophylaxis can be abridged with no measurable impact on clinical outcome in Cambodia, 2003-2014., Vaccine 2019 10; 37 Suppl 1(): A118-A127.

Bouchez V, Baines SL, Guillot S, Brisse S, Complete Genome Sequences of Bordetella pertussis Clinical Isolate FR5810 and Reference Strain Tohama from Combined Oxford Nanopore and Illumina Sequencing, Microbiol Resour Announc 2018 Nov;7(19).

Kraemer MUG, Cummings DAT, Funk S, Reiner RC, Faria NR, Pybus OG, Cauchemez S, , Reconstruction and prediction of viral disease epidemics., Epidemiol Infect 2018 Nov; 147(): e34.

Voegele A, O'Brien DP, Subrini O, Sapay N, Cannella SE, Enguéné VYN, Hessel A, Karst J, Hourdel V, Perez ACS, Davi M, Veneziano R, Chopineau J, Vachette P, Durand D, Brier S, Ladant D, Chenal A, Translocation and calmodulin-activation of the adenylate cyclase toxin (CyaA) of Bordetella pertussis., Pathog Dis 2018 Nov; 76(8): .

Frank T, Hong E, Mbecko JR, Lombart JP, Taha MK, Rubbo PA, Emergence of Neisseria meningitidis Serogroup W, Central African Republic, 2015-2016, Emerging Infect. Dis. 2018 11;24(11):2080-2083.

Vincent JP, Komaki-Yasuda K, Existe AV, Boncy J, Kano S, No Plasmodium falciparum Chloroquine Resistance Transporter and Artemisinin Resistance Mutations, Haiti., Emerg Infect Dis 2018 Nov; 24(11): 2124-2126.

Pomar L, Vouga M, Lambert V, Pomar C, Hcini N, Jolivet A, Benoist G, Rousset D, Matheus S, Malinger G, Panchaud A, Carles G, Baud D, Maternal-fetal transmission and adverse perinatal outcomes in pregnant women infected with Zika virus: prospective cohort study in French Guiana, BMJ 2018 Oct;363:k4431.

Lam MMC, Wyres KL, Judd LM, Wick RR, Jenney A, Brisse S, Holt KE, Tracking key virulence loci encoding aerobactin and salmochelin siderophore synthesis in Klebsiella pneumoniae, Genome Med 2018 10;10(1):77.

Taieb F, Dub T, Madec Y, Tondeur L, Chippaux JP, Lebreton M, Medang R, Foute FNN, Tchoffo D, Potet J, Alcoba G, Comte E, Einterz EM, Nkwescheu AS, Knowledge, attitude and practices of snakebite management amongst health workers in Cameroon: Need for continuous training and capacity building., PLoS Negl Trop Dis 2018 Oct; 12(10): e0006716.

Rogée S, Larrous F, Jochmans D, Ben-Khalifa Y, Neyts J, Bourhy H, Pyrimethamine inhibits rabies virus replication in vitro, Antiviral Res. 2019 01;161:1-9.

Dazas M, Badell E, Carmi-Leroy A, Criscuolo A, Brisse S, Taxonomic status of Corynebacterium diphtheriae biovar Belfanti and proposal of Corynebacterium belfantii sp. nov, Int. J. Syst. Evol. Microbiol. 2018 Dec;68(12):3826-3831.

Katzelnick LC, Coello Escoto A, McElvany BD, Chávez C, Salje H, Luo W, Rodriguez-Barraquer I, Jarman R, Durbin AP, Diehl SA, Smith DJ, Whitehead SS, Cummings DAT, Viridot: An automated virus plaque (immunofocus) counter for the measurement of serological neutralizing responses with application to dengue virus, PLoS Negl Trop Dis 2018 10;12(10):e0006862.

Vincent JP, Komaki-Yasuda K, Iwagami M, Kawai S, Kano S, Combination of PURE-DNA extraction and LAMP-DNA amplification methods for accurate malaria diagnosis on dried blood spots., Malar J 2018 Oct; 17(1): 373.

Gao X, Huynh BT, Guillemot D, Glaser P, Opatowski L, Inference of Significant Microbial Interactions From Longitudinal Metagenomics Data, Front Microbiol 2018;9:2319.

Weidmann M, Faye O, Faye O, Abd El Wahed A, Patel P, Batejat C, Manugerra JC, Adjami A, Niedrig M, Hufert FT, Sall AA, , Development of Mobile Laboratory for Viral Hemorrhagic Fever Detection in Africa., J Infect Dis 2018 10; 218(10): 1622-1630.

Basurko C, Everhard S, Matheus S, Restrepo M, Hildéral H, Lambert V, Boukhari R, Duvernois JP, Favre A, Valmy L, Nacher M, Carles G, A prospective matched study on symptomatic dengue in pregnancy, PLoS ONE 2018;13(10):e0202005.

O'Reilly KM, Lowe R, Edmunds WJ, Mayaud P, Kucharski A, Eggo RM, Funk S, Bhatia D, Khan K, Kraemer MUG, Wilder-Smith A, Rodrigues LC, Brasil P, Massad E, Jaenisch T, Cauchemez S, Brady OJ, Yakob L, , Projecting the end of the Zika virus epidemic in Latin America: a modelling analysis., BMC Med 2018 10; 16(1): 180.

Hong E, Bakhalek Y, Taha MK, Identification of Neisseria meningitidis by MALDI-TOF MS may not be reliable, Clin. Microbiol. Infect. 2018 Oct;.

Winter AK, Wesolowski AP, Mensah KJ, Ramamonjiharisoa MB, Randriamanantena AH, Razafindratsimandresy R, Cauchemez S, Lessler J, Ferrari MJ, Metcalf CJE, Héraud JM, , Revealing Measles Outbreak Risk With a Nested Immunoglobulin G Serosurvey in Madagascar., Am J Epidemiol 2018 10; 187(10): 2219-2226.

Gaschignard J, Hassani N, El Sissy C, Bonacorsi S, Dauger S, Chomton M, Taha MK, Levy M, , Delayed Generalized Necrotic Purpuric Rash in a C6-deficient 12-year-old Girl Treated for Group W Meningococcal Disease., Pediatr Infect Dis J 2018 10; 37(10): 1014-1015.

Djuicy DD, Mouinga-Ondémé A, Cassar O, Ramassamy JL, Idam Mamimandjiami A, Bikangui R, Fontanet A, Gessain A, , Risk factors for HTLV-1 infection in Central Africa: A rural population-based survey in Gabon., PLoS Negl Trop Dis 2018 10; 12(10): e0006832.

Guiddir T, Gros M, Hong E, Terrade A, Denizon M, Deghmane AE, Taha MK, , Unusual Initial Abdominal Presentations of Invasive Meningococcal Disease., Clin Infect Dis 2018 09; 67(8): 1220-1227.

Perbet S, Verdonk F, Godet T, Jabaudon M, Chartier C, Cayot S, Guerin R, Morand D, Bazin JE, Futier E, Pereira B, Constantin JM, Low doses of ketamine reduce delirium but not opiate consumption in mechanically ventilated and sedated ICU patients: A randomised double-blind control trial, Anaesth Crit Care Pain Med 2018 12;37(6):589-595.

Ihantamalala FA, Herbreteau V, Rakotoarimanana FMJ, Rakotondramanga JM, Cauchemez S, Rahoilijaona B, Pennober G, Buckee CO, Rogier C, Metcalf CJE, Wesolowski A, , Estimating sources and sinks of malaria parasites in Madagascar., Nat Commun 2018 09; 9(1): 3897.

Llibre A, Shimakawa Y, Duffy D, , Potential utility of the Genedrive point-of-care test for HCV RNA detection., Gut 2019 Oct; 68(10): 1903-1904.

Fontaine A, de Laval F, Belleoud D, Briolant S, Matheus S, Duration of Zika Viremia in Serum, Clin. Infect. Dis. 2018 Sep;67(7):1143-1144.

Sauvage V, Gomez J, Barray A, Vandenbogaert M, Boizeau L, Tagny CT, Rakoto O, Bizimana P, Guitteye H, Ciré BB, Soumana H, Tchomba JS, Caro V, Laperche S, High prevalence of cyclovirus Vietnam (CyCV-VN) in plasma samples from Madagascan healthy blood donors, Infect. Genet. Evol. 2018 12;66:9-12.

Vonaesch P, Morien E, Andrianonimiadana L, Sanke H, Mbecko JR, Huus KE, Naharimanananirina T, Gondje BP, Nigatoloum SN, Vondo SS, Kaleb Kandou JE, Randremanana R, Rakotondrainipiana M, Mazel F, Djorie SG, Gody JC, Finlay BB, Rubbo PA, Wegener Parfrey L, Collard JM, Sansonetti PJ, Stunted childhood growth is associated with decompartmentalization of the gastrointestinal tract and overgrowth of oropharyngeal taxa., Proc Natl Acad Sci U S A 2018 Sep; 115(36): E8489-E8498.

Mughini-Gras L, Kooh P, Augustin JC, David J, Fravalo P, Guillier L, Jourdan-Da-Silva N, Thébault A, Sanaa M, Watier L, , Source Attribution of Foodborne Diseases: Potentialities, Hurdles, and Future Expectations, Front Microbiol 2018;9:1983.

Matheus S, Kallel H, Roux A, Bremand L, Labeau B, Moua D, Rousset D, Donato D, Lacoste V, Houcke S, Mayence C, de Thoisy B, Hommel D, Lavergne A, Maripa Virus RNA Load and Antibody Response in Hantavirus Pulmonary Syndrome, French Guiana, Emerging Infect. Dis. 2018 09;24(9):1734-1736.

Parize P, Dacheux L, Larrous F, Bourhy H, , The shift in rabies epidemiology in France: time to adjust rabies post-exposure risk assessment, Euro Surveill. 2018 09;23(39).

Hong E, Deghmane AE, Taha MK, , Acquisition of Beta-Lactamase by Neisseria meningitidis through Possible Horizontal Gene Transfer., Antimicrob Agents Chemother 2018 09; 62(9): .

Nikolay B, Cauchemez S, , Enterovirus outbreak dynamics., Science 2018 08; 361(6404): 755-756.

Faria NR, Kraemer MUG, Hill SC, Goes de Jesus J, Aguiar RS, Iani FCM, Xavier J, Quick J, du Plessis L, Dellicour S, Thézé J, Carvalho RDO, Baele G, Wu CH, Silveira PP, Arruda MB, Pereira MA, Pereira GC, Lourenço J, Obolski U, Abade L, Vasylyeva TI, Giovanetti M, Yi D, Weiss DJ, Wint GRW, Shearer FM, Funk S, Nikolay B, Fonseca V, Adelino TER, Oliveira MAA, Silva MVF, Sacchetto L, Figueiredo PO, Rezende IM, Mello EM, Said RFC, Santos DA, Ferraz ML, Brito MG, Santana LF, Menezes MT, Brindeiro RM, Tanuri A, Dos Santos FCP, Cunha MS, Nogueira JS, Rocco IM, da Costa AC, Komninakis SCV, Azevedo V, Chieppe AO, Araujo ESM, Mendonça MCL, Dos Santos CC, Dos Santos CD, Mares-Guia AM, Nogueira RMR, Sequeira PC, Abreu RG, Garcia MHO, Abreu AL, Okumoto O, Kroon EG, de Albuquerque CFC, Lewandowski K, Pullan ST, Carroll M, de Oliveira T, Sabino EC, Souza RP, Suchard MA, Lemey P, Trindade GS, Drumond BP, Filippis AMB, Loman NJ, Cauchemez S, Alcantara LCJ, Pybus OG, , Genomic and epidemiological monitoring of yellow fever virus transmission potential., Science 2018 08; 361(6405): 894-899.

Paireau J, Pelat C, Caserio-Schönemann C, Pontais I, Le Strat Y, Lévy-Bruhl D, Cauchemez S, , Mapping influenza activity in emergency departments in France using Bayesian model-based geostatistics., Influenza Other Respir Viruses 2018 11; 12(6): 772-779.

Nielsen HL, Tarpgaard IH, Fuglsang-Damgaard D, Thomsen PK, Brisse S, Dalager-Pedersen M, , Rare Elizabethkingia anophelis meningitis case in a Danish male., JMM Case Rep 2018 Aug; 5(8): e005163.

Mayeuf-Louchart A, Hardy D, Thorel Q, Roux P, Gueniot L, Briand D, Mazeraud A, Bouglé A, Shorte SL, Staels B, Chrétien F, Duez H, Danckaert A, MuscleJ: a high-content analysis method to study skeletal muscle with a new Fiji tool, Skelet Muscle 2018 Aug;8(1):25.

Zhou Z, Lundstrøm I, Tran-Dien A, Duchêne S, Alikhan NF, Sergeant MJ, Langridge G, Fotakis AK, Nair S, Stenøien HK, Hamre SS, Casjens S, Christophersen A, Quince C, Thomson NR, Weill FX, Ho SYW, Gilbert MTP, Achtman M, Pan-genome Analysis of Ancient and Modern Salmonella enterica Demonstrates Genomic Stability of the Invasive Para C Lineage for Millennia, Curr Biol. 2018 Aug 6;28(15):2420-2428.e10.

Phan NT, Gouilh MA, Paireau J, Phuong L, Cheval J, Ngu ND, Hébert C, Nguyen TH, Lortholary O, Tondeur L, Manuguerra JC, Barouki R, Sander J, Janzen N, Nguyen HT, Brey PT, Fontanet A, Eloit M, Hypoglycemic Toxins and Enteroviruses as Causes of Outbreaks of Acute Encephalitis-Like Syndrome in Children, Bac Giang Province, Northern Vietnam, Emerging Infect. Dis. 2018 08;24(8):1435-1443.

Levy M, Deghmane AE, Aouiti-Trabelsi M, Dauger S, Faye A, Mariani-Kurkdjian P, Taha MK, , Analysis of the impact of corticosteroids adjuvant treatment during experimental invasive meningococcal infection in mice., Steroids 2018 Aug; 136(): 32-39.

Dacheux L, Bourhy H, Diagnostic tests for human rabies, Rev. - Off. Int. Epizoot. 2018 Aug;37(2):581-593.

Jean-Pierre Lepargneur, Anne Le Fleche-Mateos, NOUVEAUTÉS DANS LA FAMILLE N° 112 DES BIFIDOBACTERIACEAE : AERISCARDOVIA, ALLOSCARDOVIA, METASCARDOVIA, PARASCARDOVIA, SCARDOVIA ET BIFIDOBACTERIUM SCARDOVII, Jean Freney, Philippe Riegel. Précis de Bactériologie Clinique, ESKA, 2018, 978-2-7472-2806-0.

Romette JL, Prat CM, Gould EA, de Lamballerie X, Charrel R, Coutard B, Fooks AR, Bardsley M, Carroll M, Drosten C, Drexler JF, Günther S, Klempa B, Pinschewer D, Klimkait T, Avsic-Zupanc T, Capobianchi MR, Dicaro A, Ippolito G, Nitsche A, Koopmans M, Reusken C, Gorbalenya A, Raoul H, Bourhy H, Mettenleiter T, Reiche S, Batten C, Sabeta C, Paweska JT, Eropkin M, Zverev V, Hu Z, Mac Cullough S, Mirazimi A, Pradel F, Lieutaud P, The European Virus Archive goes global: A growing resource for research, Antiviral Res. 2018 10;158:127-134.

Vonaesch P, Randremanana R, Gody JC, Collard JM, Giles-Vernick T, Doria M, Vigan-Womas I, Rubbo PA, Etienne A, Andriatahirintsoa EJ, Kapel N, Brown E, Huus KE, Duffy D, Finlay BB, Hasan M, Hunald FA, Robinson A, Manirakiza A, Wegener-Parfrey L, Vray M, Sansonetti PJ, Identifying the etiology and pathophysiology underlying stunting and environmental enteropathy: study protocol of the AFRIBIOTA project., BMC Pediatr 2018 Jul; 18(1): 236.

Martin P, Bladier C, Meek B, Bruyere O, Feinblatt E, Touvier M, Watier L, Makowski D, Weight of Evidence for Hazard Identification: A Critical Review of the Literature, Environ. Health Perspect. 2018 07;126(7):076001.

Lam MMC, Wyres KL, Duchêne S, Wick RR, Judd LM, Gan YH, Hoh CH, Archuleta S, Molton JS, Kalimuddin S, Koh TH, Passet V, Brisse S, Holt KE, Population genomics of hypervirulent Klebsiella pneumoniae clonal-group 23 reveals early emergence and rapid global dissemination, Nat Commun 2018 07;9(1):2703.

Lam MMC, Wick RR, Wyres KL, Gorrie CL, Judd LM, Jenney AWJ, Brisse S, Holt KE, Genetic diversity, mobilisation and spread of the yersiniabactin-encoding mobile element ICEKp in Klebsiella pneumoniae populations, Microb Genom 2018 Sep;4(9).

Mohamed Z, Rwegasha J, Kim JU, Shimakawa Y, Poiteau L, Chevaliez S, Bhagani S, Taylor-Robinson SD, Thursz MR, Mbwambo J, Lemoine M, , The hepatitis C cascade of care in people who inject drugs in Dar es Salaam, Tanzania., J Viral Hepat 2018 Dec; 25(12): 1438-1445.

Thabuis A, Tararbit K, Taha MK, Dejour-Salamanca D, Ronin V, Parent du Chatelet I, Spaccaferri G, , Community outbreak of serogroup B invasive meningococcal disease in Beaujolais, France, February to June 2016: from alert to targeted vaccination., Euro Surveill 2018 07; 23(28): .

Cheysson F, Vibet MA, Guillemot D, Watier L, Estimation of exposure-attributable fractions from time series: A simulation study, Stat Med 2018 Oct;37(24):3437-3454.

Razki A, Hong E, Zerouali K, Belabbes H, Aitmouss K, Terrade A, Zaki B, Deghmane AE, Elmdaghri N, Taha MK, , Molecular Characterization of Invasive Isolates of Neisseria meningitidis in Casablanca, Morocco., J Clin Microbiol 2018 07; 56(7): .

Breurec S, Rafaï C, Onambele M, Frank T, Farra A, Legrand A, Weill FX., Serotype Distribution and Antimicrobial Resistance of Shigella Species in Bangui, Central African Republic, from 2002 to 2013., Am J Trop Med Hyg. 2018 Aug;99(2):283-286..

Rodrigues, Passet and Brisse, Identification of Klebsiella pneumoniae complex members using MALDI-TOF mass spectrometry, BioRxiv doi: https://doi.org/10.1101/350579 .

Shimakawa Y, Njie R, Ndow G, Vray M, Mbaye PS, Bonnard P, Sombié R, Nana J, Leroy V, Bottero J, Ingiliz P, Post G, Sanneh B, Baldeh I, Suso P, Ceesay A, Jeng A, Njai HF, Nayagam S, D'Alessandro U, Chemin I, Mendy M, Thursz M, Lemoine M, , Development of a simple score based on HBeAg and ALT for selecting patients for HBV treatment in Africa., J Hepatol 2018 Oct; 69(4): 776-784.

Halby L, Marechal N, Pechalrieu D, Cura V, Franchini DM, Faux C, Alby F, Troffer-Charlier N, Kudithipudi S, Jeltsch A, Aouadi W, Decroly E, Guillemot JC, Page P, Ferroud C, Bonnefond L, Guianvarc'h D, Cavarelli J, Arimondo PB, , , Philos Trans R Soc Lond B Biol Sci 2018 06; 373(1748): .

El Kassas M, Funk AL, Salaheldin M, Shimakawa Y, Eltabbakh M, Jean K, El Tahan A, Sweedy AT, Afify S, Youssef NF, Esmat G, Fontanet A, , Increased recurrence rates of hepatocellular carcinoma after DAA therapy in a hepatitis C-infected Egyptian cohort: A comparative analysis., J Viral Hepat 2018 Jun; 25(6): 623-630.

Bouchez V, Guglielmini J, Dazas M, Landier A, Toubiana J, Guillot S, Criscuolo A, Brisse S, Genomic Sequencing of Bordetella pertussis for Epidemiology and Global Surveillance of Whooping Cough, Emerging Infect. Dis. 2018 Jun;24(6):988-994.

Succo T, Noël H, Nikolay B, Maquart M, Cochet A, Leparc-Goffart I, Catelinois O, Salje H, Pelat C, de Crouy-Chanel P, de Valk H, Cauchemez S, Rousseau C, , Dengue serosurvey after a 2-month long outbreak in Nîmes, France, 2015: was there more than met the eye?, Euro Surveill 2018 06; 23(23): .

El Kassas M, Funk AL, Abd El Latif Y, Vasiliu A, Sherief A, Shimakawa Y, Youssef N, El Tahan A, Elbadry M, Farid AM, El Shazly Y, Doss W, Esmat G, Fontanet A, , Letter: concordance of SVR4 and SVR12 following direct-acting anti-viral treatment in Egypt., Aliment Pharmacol Ther 2018 Jun; 47(11): 1564-1566.

Andrade LN, Novais Â, Stegani LMM, Ferreira JC, Rodrigues C, Darini ALC, Peixe L, , Virulence genes, capsular and plasmid types of multidrug-resistant CTX-M(-2, -8, -15) and KPC-2-producing Klebsiella pneumoniae isolates from four major hospitals in Brazil., Diagn Microbiol Infect Dis 2018 Jun; 91(2): 164-168.

Gaidet N, Leclercq I, Batéjat C, Grassin Q, Daufresne T, Manuguerra JC, , Avian Influenza Virus Surveillance in High Arctic Breeding Geese, Greenland., Avian Dis 2018 06; 62(2): 237-240.

Seck A, Ndiaye F, Maylin S, Ndiaye B, Simon F, Funk AL, Fontanet A, Takahashi K, Akbar SMF, Mishiro S, Bercion R, Vray M, Shimakawa Y, , Poor Sensitivity of Commercial Rapid Diagnostic Tests for Hepatitis B e Antigen in Senegal, West Africa., Am J Trop Med Hyg 2018 Aug; 99(2): 428-434.

Bouglé A, Rocheteau P, Hivelin M, Haroche A, Briand D, Tremolada C, Mantz J, Chrétien F, Micro-fragmented fat injection reduces sepsis-induced acute inflammatory response in a mouse model, Br J Anaesth 2018 Dec;121(6):1249-1259.

Courtejoie N, Zanella G, Durand B, Bluetongue transmission and control in Europe: A systematic review of compartmental mathematical models, Prev. Vet. Med. 2018 Aug;156:113-125.

Salje H, Cummings DAT, Rodriguez-Barraquer I, Katzelnick LC, Lessler J, Klungthong C, Thaisomboonsuk B, Nisalak A, Weg A, Ellison D, Macareo L, Yoon IK, Jarman R, Thomas S, Rothman AL, Endy T, Cauchemez S, , Reconstruction of antibody dynamics and infection histories to evaluate dengue risk., Nature 2018 05; 557(7707): 719-723.

Baker S, Thomson N, Weill FX, Holt KE, Genomic insights into the emergence and spread of antimicrobial-resistant bacterial pathogens, Science 2018 05;360(6390):733-738.

Lesourd A, Magne N, Soares A, Lemaitre C, Taha MK, Gueit I, Wolff M, Caron F, , Primary bacterial ventriculitis in adults, an emergent diagnosis challenge: report of a meningoccal case and review of the literature., BMC Infect Dis 2018 05; 18(1): 226.

Courtejoie N, Salje H, Durand B, Zanella G, Cauchemez S, , Using serological studies to reconstruct the history of bluetongue epidemic in French cattle under successive vaccination campaigns., Epidemics 2018 12; 25(): 54-60.

Depoux A, Philibert A, Rabier S, Philippe HJ, Fontanet A, Flahault A, A multi-faceted pandemic: a review of the state of knowledge on the Zika virus, Public Health Rev 2018;39:10.

Azman AS, Luquero FJ, Salje H, Naibei Mbaïbardoum N, Adalbert N, Ali M, Bertuzzo E, Finger F, Toure B, Massing LA, Ramazani R, Saga B, Allan M, Olson D, Leglise J, Porten K, Lessler J, Micro-hotspots of Risk in Urban Cholera Epidemics, J. Infect. Dis. 2018 May;.

Ali ST, Wu P, Cauchemez S, He D, Fang VJ, Cowling BJ, Tian L, , Ambient ozone and influenza transmissibility in Hong Kong., Eur Respir J 2018 05; 51(5): .

Baker KS, Dallman TJ, Field N, Childs T, Mitchell H, Day M, Weill FX, Lefèvre S, Tourdjman M, Hughes G, Jenkins C, Thomson N, Genomic epidemiology of Shigella in the United Kingdom shows transmission of pathogen sublineages and determinants of antimicrobial resistance, Sci Rep 2018 May;8(1):7389.

El Kassas M, Shimakawa Y, Ali-Eldin Z, Funk AL, Wifi MN, Zaky S, El-Raey F, Esmat G, Fontanet A, , Risk of hepatitis B virus reactivation with direct-acting antivirals against hepatitis C virus: A cohort study from Egypt and meta-analysis of published data., Liver Int 2018 Dec; 38(12): 2159-2169.

Bratcher HB, Brehony C, Heuberger S, Pieridou-Bagatzouni D, Křížová P, Hoffmann S, Toropainen M, Taha MK, Claus H, Tzanakaki G, Erdôsi T, Galajeva J, van der Ende A, Skoczyńska A, Pana M, Vaculíková A, Paragi M, Maiden MC, Caugant DA, Establishment of the European meningococcal strain collection genome library (EMSC-GL) for the 2011 to 2012 epidemiological year, Euro Surveill. 2018 May;23(20).

Pollett S, Melendrez MC, Maljkovic Berry I, Duchêne S, Salje H, Cummings DAT, Jarman RG, Understanding dengue virus evolution to support epidemic surveillance and counter-measure development, Infect. Genet. Evol. 2018 Apr;62:279-295.

Barkoff AM, Mertsola J, Pierard D, Dalby T, Hoegh SV, Guillot S, Stefanelli P, van Gent M, Berbers G, Vestrheim DF, Greve-Isdahl M, Wehlin L, Ljungman M, Fry NK, Markey K, Auranen K, He Q, Surveillance of Circulating Bordetella pertussis Strains in Europe during 1998 to 2015, J. Clin. Microbiol. 2018 05;56(5).

Garcia-Hermoso D, Criscuolo A, Lee SC, Legrand M, Chaouat M, Denis B, Lafaurie M, Rouveau M, Soler C, Schaal JV, Mimoun M, Mebazaa A, Heitman J, Dromer F, Brisse S, Bretagne S, Alanio A, , Outbreak of Invasive Wound Mucormycosis in a Burn Unit Due to Multiple Strains of Mucor circinelloides f. circinelloides Resolved by Whole-Genome Sequencing., mBio 2018 04; 9(2): .

Basurko C, Matheus S, Hildéral H, Everhard S, Restrepo M, Cuadro-Alvarez E, Lambert V, Boukhari R, Duvernois JP, Favre A, Nacher M, Carles G, Estimating the Risk of Vertical Transmission of Dengue: A Prospective Study, Am. J. Trop. Med. Hyg. 2018 Jun;98(6):1826-1832.

Njouom R, Siffert I, Texier G, Lachenal G, Tejiokem MC, Pépin J, Fontanet A, The burden of hepatitis C virus in Cameroon: Spatial epidemiology and historical perspective, J. Viral Hepat. 2018 08;25(8):959-968.

Baker KS, Dallman TJ, Field N, Childs T, Mitchell H, Day M, Weill FX, Lefèvre S, Tourdjman M, Hughes G, Jenkins C, Thomson N, Horizontal antimicrobial resistance transfer drives epidemics of multiple Shigella species, Nat Commun 2018 Apr;9(1):1462.

Cortes MC, Cauchemez S, Lefrancq N, Luby SP, Jahangir Hossain M, Sazzad HMS, Rahman M, Daszak P, Salje H, Gurley ES, , Characterization of the Spatial and Temporal Distribution of Nipah Virus Spillover Events in Bangladesh, 2007-2013., J Infect Dis 2018 04; 217(9): 1390-1394.

Belkacem N, Bourdet-Sicard R, Taha MK, Lactobacillus paracasei feeding improves the control of secondary experimental meningococcal infection in flu-infected mice, BMC Infect. Dis. 2018 04;18(1):167.

Llibre A, Shimakawa Y, Mottez E, Ainsworth S, Buivan TP, Firth R, Harrison E, Rosenberg AR, Meritet JF, Fontanet A, Castan P, Madejón A, Laverick M, Glass A, Viana R, Pol S, McClure CP, Irving WL, Miele G, Albert ML, Duffy D, , Development and clinical validation of the Genedrive point-of-care test for qualitative detection of hepatitis C virus., Gut 2018 Nov; 67(11): 2017-2024.

Huynh BT, Kermorvant-Duchemin E, Herindrainy P, Padget M, Rakotoarimanana FMJ, Feno H, Hariniaina-Ratsima E, Raheliarivao T, Ndir A, Goyet S, Piola P, Randrianirina F, Garin B, Collard JM, Guillemot D, Delarocque-Astagneau E, Bacterial Infections in Neonates, Madagascar, 2012-2014, Emerging Infect. Dis. 2018 04;24(4):710-717.

Huynh BT, Kermorvant-Duchemin E, Herindrainy P, Padget M, Rakotoarimanana FMJ, Feno H, Hariniaina-Ratsima E, Raheliarivao T, Ndir A, Goyet S, Piola P, Randrianirina F, Garin B, Collard JM, Guillemot D, Delarocque-Astagneau E, Bacterial Infections in Neonates, Madagascar, 2012-2014, Emerging Infect. Dis. 2018 04;24(4):710-717.

Huynh BT, Kermorvant-Duchemin E, Herindrainy P, Padget M, Rakotoarimanana FMJ, Feno H, Hariniaina-Ratsima E, Raheliarivao T, Ndir A, Goyet S, Piola P, Randrianirina F, Garin B, Collard JM, Guillemot D, Delarocque-Astagneau E, Bacterial Infections in Neonates, Madagascar, 2012-2014, Emerging Infect. Dis. 2018 04;24(4):710-717.

Mendes AC, Novais Â, Campos J, Rodrigues C, Santos C, Antunes P, Ramos H, Peixe L, , mcr-1 in Carbapenemase-Producing Klebsiella pneumoniae with Hospitalized Patients, Portugal, 2016-2017., Emerg Infect Dis 2018 04; 24(4): 762-766.

Domenech de Cellès M, Magpantay FMG, King AA, Rohani P, The impact of past vaccination coverage and immunity on pertussis resurgence, Sci Transl Med 2018 Mar;10(434).

da Costa A, Prehaud C, Khou C, Pardigon N, Saulnier A, Nougarede N, Lafon M, Innovative in cellulo method as an alternative to in vivo neurovirulence test for the characterization and quality control of human live Yellow Fever virus vaccines: A pilot study, Biologicals 2018 May;53:19-29.

Sauvage V, Boizeau L, Candotti D, Vandenbogaert M, Servant-Delmas A, Caro V, Laperche S, Early MinION™ nanopore single-molecule sequencing technology enables the characterization of hepatitis B virus genetic complexity in clinical samples, PLoS ONE 2018;13(3):e0194366.

Petit AC, El Asmar K, David DJ, Gardier AM, Becquemont L, Fève B, Verstuyft C, Corruble E, The association of β-arrestin2 polymorphisms with response to antidepressant treatment in depressed patients, Prog. Neuropsychopharmacol. Biol. Psychiatry 2018 Feb;81:74-79.

Hoen B, Schaub B, Funk AL, Ardillon V, Boullard M, Cabié A, Callier C, Carles G, Cassadou S, Césaire R, Douine M, Herrmann-Storck C, Kadhel P, Laouénan C, Madec Y, Monthieux A, Nacher M, Najioullah F, Rousset D, Ryan C, Schepers K, Stegmann-Planchard S, Tressières B, Voluménie JL, Yassinguezo S, Janky E, Fontanet A, Pregnancy Outcomes after ZIKV Infection in French Territories in the Americas, N. Engl. J. Med. 2018 03;378(11):985-994.

McNeil LK, Donald RGK, Gribenko A, French R, Lambert N, Harris SL, Jones TR, Li S, Zlotnick G, Vogel U, Claus H, Abad R, Vazquez JA, Borrow R, Findlow J, Taha MK, Deghmane AE, Caugant DA, Kriz P, Musilek M, Wang X, Vuong J, Mayer LW, Pride MW, Jansen KU, Anderson AS, , Predicting the Susceptibility of Meningococcal Serogroup B Isolates to Bactericidal Antibodies Elicited by Bivalent rLP2086, a Novel Prophylactic Vaccine., mBio 2018 03; 9(2): .

Shimakawa Y, Seck A, Nayagam S, Toure-Kane C, Lemoine M, , Screening strategies to prevent mother-to-child transmission of hepatitis B in sub-Saharan Africa., Lancet Gastroenterol Hepatol 2018 Apr; 3(4): 222-223.

Lemoine M, Mohamed Z, Chevaliez S, Shimakawa Y, Rwegasha J, , Role of hepatitis C virus core antigen assay in hepatitis C care in Africa., Lancet Gastroenterol Hepatol 2018 Apr; 3(4): 223-224.

Rakotondrasoa A, Issack MI, Garin B, Biot F, Valade E, Wattiau P, Allou N, Belmonte O, Bibi J, Price EP, Collard JM, Melioidosis in the Western Indian Ocean and the Importance of Improving Diagnosis, Surveillance, and Molecular Typing., Trop Med Infect Dis 2018 Mar; 3(1): .

Rivoisy C, Vena A, Schaeffer L, Charlier C, Fontanet A, Delahaye F, Bouza E, Lortholary O, Munoz P, Lefort A, , Prosthetic Valve Candida spp. Endocarditis: New Insights Into Long-term Prognosis-The ESCAPE Study, Clin. Infect. Dis. 2018 Mar;66(6):825-832.

Nadimpalli M, Delarocque-Astagneau E, Love DC, Price LB, Huynh BT, Collard JM, Lay KS, Borand L, Ndir A, Walsh TR, Guillemot D, Combating Global Antibiotic Resistance: Emerging One Health Concerns in Lower- and Middle-Income Countries., Clin Infect Dis 2018 Mar; 66(6): 963-969.

Herindrainy P, Rabenandrasana MAN, Andrianirina ZZ, Rakotoarimanana FMJ, Padget M, de Lauzanne A, Ndir A, Kermorvant-Duchemin E, Garin B, Piola P, Collard JM, Guillemot D, Huynh BT, Delarocque-Astagneau E, Acquisition of extended spectrum beta-lactamase-producing enterobacteriaceae in neonates: A community based cohort in Madagascar., PLoS One 2018 ; 13(3): e0193325.

Williams AH, Wheeler R, Rateau L, Malosse C, Chamot-Rooke J, Haouz A, Taha MK, Boneca IG, , A step-by-step in crystallo guide to bond cleavage and 1,6-anhydro-sugar product synthesis by a peptidoglycan-degrading lytic transglycosylase., J Biol Chem 2018 04; 293(16): 6000-6010.

Smith DRM, Dolk FCK, Smieszek T, Robotham JV, Pouwels KB, Understanding the gender gap in antibiotic prescribing: a cross-sectional analysis of English primary care, BMJ Open 2018 02;8(2):e020203.

Opatowski L, Baguelin M, Eggo RM, Influenza interaction with cocirculating pathogens and its impact on surveillance, pathogenesis, and epidemic profile: A key role for mathematical modelling, PLoS Pathog. 2018 02;14(2):e1006770.

Abraham P, Verdonk F, Buleon C, Tesniere A, Lilot M, Implementation of a novel synchronous multi-site all day high-fidelity simulation, Adv Simul (Lond) 2018;3:2.

Li J, Shao Z, Liu G, Bai X, Borrow R, Chen M, Guo Q, Han Y, Li Y, Taha MK, Xu X, Xu X, Zheng H, Meningococcal disease and control in China: Findings and updates from the Global Meningococcal Initiative (GMI), J. Infect. 2018 May;76(5):429-437.

Shirley M, Taha MK, , MenB-FHbp Meningococcal Group B Vaccine (Trumenba®): A Review in Active Immunization in Individuals Aged ≥ 10 Years., Drugs 2018 Feb; 78(2): 257-268.

Hong E, Barret AS, Terrade A, Denizon M, Antona D, Aouiti-Trabelsi M, Deghmane AE, Parent du Châtelet I, Levy-Bruhl D, Taha MK, , Clonal replacement and expansion among invasive meningococcal isolates of serogroup W in France., J Infect 2018 Feb; 76(2): 149-158.

Smieszek T, Pouwels KB, Dolk FCK, Smith DRM, Hopkins S, Sharland M, Hay AD, Moore MV, Robotham JV, Potential for reducing inappropriate antibiotic prescribing in English primary care, J. Antimicrob. Chemother. 2018 Feb;73(suppl_2):ii36-ii43.

Pouwels KB, Dolk FCK, Smith DRM, Smieszek T, Robotham JV, Explaining variation in antibiotic prescribing between general practices in the UK, J. Antimicrob. Chemother. 2018 Feb;73(suppl_2):ii27-ii35.

Pouwels KB, Dolk FCK, Smith DRM, Robotham JV, Smieszek T, Actual versus ‘ideal’ antibiotic prescribing for common conditions in English primary care, J. Antimicrob. Chemother. 2018 Feb;73(suppl_2):19-26.

Dolk FCK, Pouwels KB, Smith DRM, Robotham JV, Smieszek T, Antibiotics in primary care in England: which antibiotics are prescribed and for which conditions?, J. Antimicrob. Chemother. 2018 Feb;73(suppl_2):ii2-ii10.

Smith DRM, Dolk FCK, Pouwels KB, Christie M, Robotham JV, Smieszek T, Defining the appropriateness and inappropriateness of antibiotic prescribing in primary care, J. Antimicrob. Chemother. 2018 Feb;73(suppl_2):ii11-ii18.

Ihantamalala FA, Rakotoarimanana FMJ, Ramiadantsoa T, Rakotondramanga JM, Pennober G, Rakotomanana F, Cauchemez S, Metcalf CJE, Herbreteau V, Wesolowski A, , Spatial and temporal dynamics of malaria in Madagascar., Malar J 2018 Feb; 17(1): 58.

Tarantola A, Blanchi S, Cappelle J, Ly S, Chan M, In S, Peng Y, Hing C, Taing CN, Ly S, Bourhy H, Buchy P, Dussart P, Mary JY, Rabies Postexposure Prophylaxis Noncompletion After Dog Bites: Estimating the Unseen to Meet the Needs of the Underserved, Am. J. Epidemiol. 2018 02;187(2):306-315.

Kühnert D, Kouyos R, Shirreff G, Pečerska J, Scherrer AU, Böni J, Yerly S, Klimkait T, Aubert V, Günthard HF, Stadler T, Bonhoeffer S, Quantifying the fitness cost of HIV-1 drug resistance mutations through phylodynamics., PLoS Pathog 2018 Feb; 14(2): e1006895.

Corelli B, Almeida AS, Sonego F, Castiglia V, Fevre C, Brisse S, Sansonetti PJ, Tournebize R, Rhinoscleroma pathogenesis: The type K3 capsule of Klebsiella rhinoscleromatis is a virulence factor not involved in Mikulicz cells formation, PLoS Negl Trop Dis 2018 Jan;12(1):e0006201.

Yan J, Grantham M, Pantelic J, Bueno de Mesquita PJ, Albert B, Liu F, Ehrman S, Milton DK, , , Infectious virus in exhaled breath of symptomatic seasonal influenza cases from a college community., Proc Natl Acad Sci U S A 2018 01; 115(5): 1081-1086.

Duval A, Obadia T, Martinet L, Boëlle PY, Fleury E, Guillemot D, Opatowski L, Temime L, , Measuring dynamic social contacts in a rehabilitation hospital: effect of wards, patient and staff characteristics, Sci Rep 2018 01;8(1):1686.

O'Brien DP, Perez ACS, Karst J, Cannella SE, Enguéné VYN, Hessel A, Raoux-Barbot D, Voegele A, Subrini O, Davi M, Guijarro JI, Raynal B, Baron B, England P, Hernandez B, Ghomi M, Hourdel V, Malosse C, Chamot-Rooke J, Vachette P, Durand D, Brier S, Ladant D, Chenal A, Calcium-dependent disorder-to-order transitions are central to the secretion and folding of the CyaA toxin of Bordetella pertussis, the causative agent of whooping cough., Toxicon 2018 Jul; 149(): 37-44.

Tavares M, Carvalho AC, Almeida JP, Andrade P, São-Simão R, Soares P, Alves C, Pinto R, Fontanet A, Watier L, Implementation and impact of an audit and feedback antimicrobial stewardship intervention in the orthopaedics department of a tertiary-care hospital: a controlled interrupted time series study, Int. J. Antimicrob. Agents 2018 Jun;51(6):925-931.

McElhinney LM, Marston DA, Wise EL, Freuling CM, Bourhy H, Zanoni R, Moldal T, Kooi EA, Neubauer-Juric A, Nokireki T, Müller T, Fooks AR, Molecular Epidemiology and Evolution of European Bat Lyssavirus 2, Int J Mol Sci 2018 Jan;19(1).

Nicholson AC, Gulvik CA, Whitney AM, Humrighouse BW, Graziano J, Emery B, Bell M, Loparev V, Juieng P, Gartin J, Bizet C, Clermont D, Criscuolo A, Brisse S, McQuiston JR, , Revisiting the taxonomy of the genus Elizabethkingia using whole-genome sequencing, optical mapping, and MALDI-TOF, along with proposal of three novel Elizabethkingia species: Elizabethkingia bruuniana sp. nov., Elizabethkingia ursingii sp. nov., and Elizabethkingia occulta sp. nov., Antonie Van Leeuwenhoek 2018 Jan; 111(1): 55-72.

Rodrigues C, Passet V, Rakotondrasoa A, Brisse S, , Identification of Klebsiella pneumoniae, Klebsiella quasipneumoniae, Klebsiella variicola and Related Phylogroups by MALDI-TOF Mass Spectrometry., Front Microbiol 2018 ; 9(): 3000.

Labadie T, Batéjat C, Manuguerra JC, Leclercq I, , Influenza Virus Segment Composition Influences Viral Stability in the Environment., Front Microbiol 2018 ; 9(): 1496.

Diallo K, Coulibaly MD, Rebbetts LS, Harrison OB, Lucidarme J, Gamougam K, Tekletsion YK, Bugri A, Toure A, Issaka B, Dieng M, Trotter C, Collard JM, Sow SO, Wang X, Mayer LW, Borrow R, Greenwood BM, Maiden MCJ, Manigart O, Development of a PCR algorithm to detect and characterize Neisseria meningitidis carriage isolates in the African meningitis belt., PLoS One 2018 ; 13(12): e0206453.

Komaki-Yasuda K, Vincent JP, Nakatsu M, Kato Y, Ohmagari N, Kano S, A novel PCR-based system for the detection of four species of human malaria parasites and Plasmodium knowlesi., PLoS One 2018 ; 13(1): e0191886.

Zinsstag J, Lechenne M, Laager M, Mindekem R, Naïssengar S, Oussiguéré A, Bidjeh K, Rives G, Tessier J, Madjaninan S, Ouagal M, Moto DD, Alfaroukh IO, Muthiani Y, Traoré A, Hattendorf J, Lepelletier A, Kergoat L, Bourhy H, Dacheux L, Stadler T, Chitnis N, Vaccination of dogs in an African city interrupts rabies transmission and reduces human exposure, Sci Transl Med 2017 Dec;9(421).

Dupont-Rouzeyrol M, Diancourt L, Calvez E, Vandenbogaert M, O'Connor O, Teissier A, Pol M, Aubry M, Faye O, Tou D, Cao-Lormeau VM, Caro V, Zika virus evolution on the edges of the Pacific ocean, Emerg Microbes Infect 2017 12;6(12):e111.

Passet V, Brisse S, Description of Klebsiella grimontii sp. nov, Int. J. Syst. Evol. Microbiol. 2018 Jan;68(1):377-381.

Tran-Dien A, Le Hello S, Bouchier C, Weill FX, Early transmissible ampicillin resistance in zoonotic Salmonella enterica serotype Typhimurium in the late 1950s: a retrospective, whole-genome sequencing study, Lancet Infect Dis 2018 Feb;18(2):207-214.

Rosello A, Pouwels KB, Domenech DE Cellès M, VAN Kleef E, Hayward AC, Hopkins S, Robotham JV, Smieszek T, Opatowski L, Deeny SR, Seasonality of urinary tract infections in the United Kingdom in different age groups: longitudinal analysis of The Health Improvement Network (THIN), Epidemiol. Infect. 2018 01;146(1):37-45.

van der Vorst EP, Theodorou K, Wu Y, Hoeksema MA, Goossens P, Bursill CA, Aliyev T, Huitema LF, Tas SW, Wolfs IM, Kuijpers MJ, Gijbels MJ, Schalkwijk CG, Koonen DP, Abdollahi-Roodsaz S, McDaniels K, Wang CC, Leitges M, Lawrence T, Plat J, Van Eck M, Rye KA, Touqui L, de Winther MP, Biessen EA, Donners MM, High-Density Lipoproteins Exert Pro-inflammatory Effects on Macrophages via Passive Cholesterol Depletion and PKC-NF-κB/STAT1-IRF1 Signaling, Cell Metab. 2017 Jan;25(1):197-207.

Narat V, Alcayna-Stevens L, Rupp S, Giles-Vernick T, Rethinking Human-Nonhuman Primate Contact and Pathogenic Disease Spillover, Ecohealth 2017 Dec;14(4):840-850.

Matheus S, de Laval F, Moua D, N'Guyen C, Martinez E, Rousset D, Briolant S, Zika Virus Persistence and Higher Viral Loads in Cutaneous Capillaries Than in Venous Blood, Emerging Infect. Dis. 2017 11;23(11).

Andronico A, Dorléans F, Fergé JL, Salje H, Ghawché F, Signate A, Daudens-Vaysse E, Baudouin L, Dub T, Aubry M, Cao-Lormeau VM, Ledrans M, Noel H, Mallet HP, Fontanet A, Cabié A, Cauchemez S, , Real-Time Assessment of Health-Care Requirements During the Zika Virus Epidemic in Martinique., Am J Epidemiol 2017 Nov; 186(10): 1194-1203.

Samuelsen Ø, Overballe-Petersen S, Bjørnholt JV, Brisse S, Doumith M, Woodford N, Hopkins KL, Aasnæs B, Haldorsen B, Sundsfjord A, , Molecular and epidemiological characterization of carbapenemase-producing Enterobacteriaceae in Norway, 2007 to 2014, PLoS ONE 2017;12(11):e0187832.

Grosse-Kock S, Kolodkina V, Schwalbe EC, Blom J, Burkovski A, Hoskisson PA, Brisse S, Smith D, Sutcliffe IC, Titov L, Sangal V, Genomic analysis of endemic clones of toxigenic and non-toxigenic Corynebacterium diphtheriae in Belarus during and after the major epidemic in 1990s, BMC Genomics 2017 Nov;18(1):873.

Domman D, Quilici ML, Dorman MJ, Njamkepo E, Mutreja A, Mather AE, Delgado G, Morales-Espinosa R, Grimont PAD, Lizárraga-Partida ML, Bouchier C, Aanensen DM, Kuri-Morales P, Tarr CL, Dougan G, Parkhill J, Campos J, Cravioto A, Weill FX, Thomson NR, Integrated view of Vibrio cholerae in the Americas, Science 2017 11;358(6364):789-793.

Weill FX, Domman D, Njamkepo E, Tarr C, Rauzier J, Fawal N, Keddy KH, Salje H, Moore S, Mukhopadhyay AK, Bercion R, Luquero FJ, Ngandjio A, Dosso M, Monakhova E, Garin B, Bouchier C, Pazzani C, Mutreja A, Grunow R, Sidikou F, Bonte L, Breurec S, Damian M, Njanpop-Lafourcade BM, Sapriel G, Page AL, Hamze M, Henkens M, Chowdhury G, Mengel M, Koeck JL, Fournier JM, Dougan G, Grimont PAD, Parkhill J, Holt KE, Piarroux R, Ramamurthy T, Quilici ML, Thomson NR, Genomic history of the seventh pandemic of cholera in Africa, Science 2017 11;358(6364):785-789.

Opatowski L, Baguelin M, Eggo R, Influenza Interaction with Cocirculating Pathogens, and Its Impact on Surveillance, Pathogenesis and Epidemic Profile: A Key Role for Mathematical Modeling (accepted PLOS Pathogens), bioRxiv. 2017. doi: https://doi.org/10.1101/203265.

Watier L, Cavalié P, Coignard B, Brun-Buisson C, Comparing antibiotic consumption between two European countries: are packages an adequate surrogate for prescriptions?, Euro Surveill. 2017 Nov;22(46).

Flamand C, Fritzell C, Matheus S, Dueymes M, Carles G, Favre A, Enfissi A, Adde A, Demar M, Kazanji M, Cauchemez S, Rousset D, , The proportion of asymptomatic infections and spectrum of disease among pregnant women infected by Zika virus: systematic monitoring in French Guiana, 2016., Euro Surveill 2017 Nov; 22(44): .

Troupin C, Picard-Meyer E, Dellicour S, Casademont I, Kergoat L, Lepelletier A, Dacheux L, Baele G, Monchâtre-Leroy E, Cliquet F, Lemey P, Bourhy H, Host Genetic Variation Does Not Determine Spatio-Temporal Patterns of European Bat 1 Lyssavirus, Genome Biol Evol 2017 11;9(11):3202-3213.

Rodrigues C, Machado E, Fernandes S, Peixe L, Novais Â, , Different Escherichia coli B2-ST131 clades (B and C) producing extended-spectrum β-lactamases (ESBL) colonizing residents of Portuguese nursing homes., Epidemiol Infect 2017 11; 145(15): 3303-3306.

Prezado Y, Jouvion G, Hardy D, Patriarca A, Nauraye C, Bergs J, González W, Guardiola C, Juchaux M, Labiod D, Dendale R, Jourdain L, Sebrie C, Pouzoulet F, Proton minibeam radiation therapy spares normal rat brain: Long-Term Clinical, Radiological and Histopathological Analysis, Sci Rep 2017 Oct;7(1):14403.

Filomena A, Göpfert JC, Duffy D, Pol S, Abdel-Hamid M, Esmat G, Fontanet A, Albert ML, Joos TO, Schneiderhan-Marra N, Study of the Humoral Immune Response towards HCV Genotype 4 Using a Bead-Based Multiplex Serological Assay, High Throughput 2017 Oct;6(4).

Domenech de Cellès M, Arduin H, Varon E, Souty C, Boëlle PY, Lévy-Bruhl D, van der Werf S, Soulary JC, Guillemot D, Watier L, Opatowski L, Characterizing and Comparing the Seasonality of Influenza-Like Illnesses and Invasive Pneumococcal Diseases Using Seasonal Waveforms, Am. J. Epidemiol. 2018 05;187(5):1029-1039.

Khou C, Pardigon N, Identifying Attenuating Mutations: Tools for a New Vaccine Design against Flaviviruses, Intervirology 2017;60:8-18.

Besson B, Sonthonnax F, Duchateau M, Ben Khalifa Y, Larrous F, Eun H, Hourdel V, Matondo M, Chamot-Rooke J, Grailhe R, Bourhy H, Regulation of NF-κB by the p105-ABIN2-TPL2 complex and RelAp43 during rabies virus infection., PLoS Pathog 2017 Oct; 13(10): e1006697.

Chatre L, Verdonk F, Rocheteau P, Crochemore C, Chrétien F, Ricchetti M, , A novel paradigm links mitochondrial dysfunction with muscle stem cell impairment in sepsis., Biochim Biophys Acta Mol Basis Dis 2017 10; 1863(10 Pt B): 2546-2553.

Matheus S, Kallel H, Mayence C, Bremand L, Houcke S, Rousset D, Lacoste V, de Thoisy B, Hommel D, Lavergne A, Hantavirus Pulmonary Syndrome Caused by Maripa Virus in French Guiana, 2008-2016, Emerging Infect. Dis. 2017 10;23(10):1722-1725.

Dellicour S, Rose R, Faria NR, Vieira LFP, Bourhy H, Gilbert M, Lemey P, Pybus OG, Using Viral Gene Sequences to Compare and Explain the Heterogeneous Spatial Dynamics of Virus Epidemics, Mol. Biol. Evol. 2017 10;34(10):2563-2571.

Guiso N, Levy C, Romain O, Guillot S, Werner A, Rondeau MC, Béchet S, Cohen R, Whooping cough surveillance in France in pediatric private practice in 2006-2015, Vaccine 2017 10;35(45):6083-6088.

Bouchez V, Douché T, Dazas M, Delaplane S, Matondo M, Chamot-Rooke J, Guiso N, , Characterization of Post-Translational Modifications and Cytotoxic Properties of the Adenylate-Cyclase Hemolysin Produced by Various Bordetella pertussis and Bordetella parapertussis Isolates., Toxins (Basel) 2017 09; 9(10): .

Goujon C, Gougeon ML, Tondeur L, Poirier B, Seffer V, Desprès P, Consigny PH, Vray M, , CHRONOVAC VOYAGEUR: A study of the immune response to yellow fever vaccine among infants previously immunized against measles, Vaccine 2017 10;35(45):6166-6171.

Courtejoie N, Durand B, Bréard E, Sailleau C, Vitour D, Zientara S, Gorlier A, Baurier F, Gourmelen C, Benoit F, Achour H, Milard C, Poliak S, Pagneux C, Viarouge C, Zanella G, Serological status for BTV-8 in French cattle prior to the 2015 re-emergence, Transbound Emerg Dis 2018 Feb;65(1):e173-e182.

Belkacem N, Serafini N, Wheeler R, Derrien M, Boucinha L, Couesnon A, Cerf-Bensussan N, Gomperts Boneca I, Di Santo JP, Taha MK, Bourdet-Sicard R, , Lactobacillus paracasei feeding improves immune control of influenza infection in mice., PLoS One 2017 ; 12(9): e0184976.

Kuijpers LMF, Phe T, Veng CH, Lim K, Ieng S, Kham C, Fawal N, Fabre L, Le Hello S, Vlieghe E, Weill FX, Jacobs J, Peetermans WE, The clinical and microbiological characteristics of enteric fever in Cambodia, 2008-2015, PLoS Negl Trop Dis 2017 Sep;11(9):e0005964.

Mohamed Z, Mbwambo J, Shimakawa Y, Poiteau L, Chevaliez S, Pawlotsky JM, Rwegasha J, Bhagani S, Taylor-Robinson SD, Makani J, Thursz MR, Lemoine M, , Clinical utility of HCV core antigen detection and quantification using serum samples and dried blood spots in people who inject drugs in Dar-es-Salaam, Tanzania., J Int AIDS Soc 2017 Sep; 20(1): 21856.

Eggerbauer E, Troupin C, Passior K, Pfaff F, Höper D, Neubauer-Juric A, Haberl S, Bouchier C, Mettenleiter TC, Bourhy H, Müller T, Dacheux L, Freuling CM, The Recently Discovered Bokeloh Bat Lyssavirus: Insights Into Its Genetic Heterogeneity and Spatial Distribution in Europe and the Population Genetics of Its Primary Host, Adv. Virus Res. 2017;99:199-232.

Duffy D, Mottez E, Ainsworth S, Buivan TP, Baudin A, Vray M, Reed B, Fontanet A, Rohel A, Petrov-Sanchez V, Abel L, Theodorou I, Miele G, Pol S, Albert ML, An in vitro diagnostic certified point of care single nucleotide test for IL28B polymorphisms, PLoS ONE 2017;12(9):e0183084.

Moura A, Tourdjman M, Leclercq A, Hamelin E, Laurent E, Fredriksen N, Van Cauteren D, Bracq-Dieye H, Thouvenot P, Vales G, Tessaud-Rita N, Maury MM, Alexandru A, Criscuolo A, Quevillon E, Donguy MP, Enouf V, de Valk H, Brisse S, Lecuit M, , Real-Time Whole-Genome Sequencing for Surveillance of Listeria monocytogenes, France., Emerg Infect Dis 2017 Sep; 23(9): 1462-1470.

Gurley ES, Hegde ST, Hossain K, Sazzad HMS, Hossain MJ, Rahman M, Sharker MAY, Salje H, Islam MS, Epstein JH, Khan SU, Kilpatrick AM, Daszak P, Luby SP, Convergence of Humans, Bats, Trees, and Culture in Nipah Virus Transmission, Bangladesh, Emerging Infect. Dis. 2017 Sep;23(9):1446-1453.

Rodrigues C, Mendes AC, Sima F, Bavlovič J, Machado E, Novais Â, Peixe L, , Long-Term Care Facility (LTCF) Residents Colonized With Multidrug-Resistant (MDR) Klebsiella pneumoniae Lineages Frequently Causing Infections in Portuguese Clinical Institutions., Infect Control Hosp Epidemiol 2017 09; 38(9): 1127-1130.

Raharimalala FN, Andrianinarivomanana TM, Rakotondrasoa A, Collard JM, Boyer S, Usefulness and accuracy of MALDI-TOF mass spectrometry as a supplementary tool to identify mosquito vector species and to invest in development of international database., Med Vet Entomol 2017 Sep; 31(3): 289-298.

Simonnet C, Okandze A, Matheus S, Djossou F, Nacher M, Mahamat A, Prospective evaluation of the SD BIOLINE Dengue Duo rapid test during a dengue virus epidemic, Eur. J. Clin. Microbiol. Infect. Dis. 2017 Dec;36(12):2441-2447.

de Laval F, Matheus S, Labrousse T, Enfissi A, Rousset D, Briolant S, Kinetics of Zika Viral Load in Semen, N. Engl. J. Med. 2017 08;377(7):697-699.

Otsuka N, Guiso N, Bouchez V, The length of poly(C) stretch in the Bordetella pertussis Pfim3 promoter determines the vag or vrg function of the fim3 gene, Microbiology (Reading, Engl.) 2017 Sep;163(9):1364-1368.

Cheddani H, Desgabriel AL, Coffin E, Taha MK, Verdet C, Bachmeyer C, Flejou JF, Amiot X, No Neck Pain: Meningococcemia, Am. J. Med. 2018 Jan;131(1):37-40.

Vonaesch P, Tondeur L, Breurec S, Bata P, Nguyen LBL, Frank T, Farra A, Rafaï C, Giles-Vernick T, Gody JC, Gouandjika-Vasilache I, Sansonetti P, Vray M, , Factors associated with stunting in healthy children aged 5 years and less living in Bangui (RCA)., PLoS One 2017 ; 12(8): e0182363.

Andriamandimby SF, Olive MM, Shimakawa Y, Rakotomanana F, Razanajatovo IM, Andrianinarivomanana TM, Ravalohery JP, Andriamamonjy S, Rogier C, Héraud JM, , Prevalence of chronic hepatitis B virus infection and infrastructure for its diagnosis in Madagascar: implication for the WHO’s elimination strategy., BMC Public Health 2017 Aug; 17(1): 636.

Le Coupanec A, Tchankouo-Nguetcheu S, Roux P, Khun H, Huerre M, Morales-Vargas R, Enguehard M, Lavillette D, Missé D, Choumet V, , Co-Infection of Mosquitoes with Chikungunya and Dengue Viruses Reveals Modulation of the Replication of Both Viruses in Midguts and Salivary Glands of Aedes aegypti Mosquitoes., Int J Mol Sci 2017 Aug; 18(8): .

Dick J, Hebling S, Becam J, Taha MK, Schubert-Unkmeir A, , Comparison of the inflammatory response of brain microvascular and peripheral endothelial cells following infection with Neisseria meningitidis., Pathog Dis 2017 07; 75(5): .

Bialek-Davenet S, Mayer N, Vergalli J, Duprilot M, Brisse S, Pagès JM, Nicolas-Chanoine MH, In-vivo loss of carbapenem resistance by extensively drug-resistant Klebsiella pneumoniae during treatment via porin expression modification, Sci Rep 2017 Jul;7(1):6722.

Bassi C, Taha MK, Merle C, Hong E, Lévy-Bruhl D, Barret AS, Mounchetrou Njoya I, , A cluster of invasive meningococcal disease (IMD) caused by Neisseria meningitidis serogroup W among university students, France, February to May 2017., Euro Surveill 2017 Jul; 22(28): .

Saffarian A, Touchon M, Mulet C, Tournebize R, Passet V, Brisse S, Rocha EPC, Sansonetti PJ, Pédron T, Comparative genomic analysis of Acinetobacter strains isolated from murine colonic crypts, BMC Genomics 2017 07;18(1):525.

Magro L, Escadafal C, Garneret P, Jacquelin B, Kwasiborski A, Manuguerra JC, Monti F, Sakuntabhai A, Vanhomwegen J, Lafaye P, Tabeling P, Paper microfluidics for nucleic acid amplification testing (NAAT) of infectious diseases., Lab Chip 2017 Jul; 17(14): 2347-2371.

Poppleton DI, Duchateau M, Hourdel V, Matondo M, Flechsler J, Klingl A, Beloin C, Gribaldo S, Outer Membrane Proteome of Veillonella parvula: A Diderm Firmicute of the Human Microbiome., Front Microbiol 2017 ; 8(): 1215.

Pardigon N, Pathophysiological mechanisms of Flavivirus infection of the central nervous system, Transfus Clin Biol 2017 Sep;24(3):96-100.

Shimakawa Y, Pourette D, Bainilago L, Enel C, Sombié R, Rado R, Lemoine M, Giles-Vernick T, , Improving communication about viral hepatitis in Africa., Lancet Infect Dis 2017 Jul; 17(7): 688-689.

Fonteneau L, Le Meur N, Cohen-Akenine A, Pessel C, Brouard C, Delon F, Desjeux G, Durand J, Kirchgesner J, Lapidus N, Lemaitre M, Tala S, Thiébaut A, Watier L, Rudant J, Guillon-Grammatico L, [The use of administrative health databases in infectious disease epidemiology and public health], Rev Epidemiol Sante Publique 2017 Oct;65 Suppl 4:S174-S182.

Sevestre J, Hong E, Delbos V, Terrade A, Mallet E, Deghmane AE, Lemée L, Taha MK, Caron F, , Durability of immunogenicity and strain coverage of MenBvac, a meningococcal vaccine based on outer membrane vesicles: Lessons of the Normandy campaign., Vaccine 2017 07; 35(32): 4029-4033.

Ndow G, Gore ML, Shimakawa Y, Suso P, Jatta A, Tamba S, Sow A, Touré-Kane C, Sadiq F, Sabally S, Njie R, Thursz MR, Lemoine M, , Hepatitis B testing and treatment in HIV patients in The Gambia-Compliance with international guidelines and clinical outcomes., PLoS One 2017 ; 12(6): e0179025.

Shimakawa Y, Lemoine M, , Early age at diagnosis of hepatocellular carcinoma in sub-Saharan Africa., Lancet Gastroenterol Hepatol 2017 Jun; 2(6): 393.

Mahy P, Collard JM, Gala JL, Herman P, Groof D, Quoilin S, Sneyers M, Health crises due to infectious and communicable diseases : European preparedness and response tools in an international context., J Bus Contin Emer Plan 2017 Jun; 10(4): 353-366.

Perrin A, Larsonneur E, Nicholson AC, Edwards DJ, Gundlach KM, Whitney AM, Gulvik CA, Bell ME, Rendueles O, Cury J, Hugon P, Clermont D, Enouf V, Loparev V, Juieng P, Monson T, Warshauer D, Elbadawi LI, Walters MS, Crist MB, Noble-Wang J, Borlaug G, Rocha EPC, Criscuolo A, Touchon M, Davis JP, Holt KE, McQuiston JR, Brisse S, , Evolutionary dynamics and genomic features of the Elizabethkingia anophelis 2015 to 2016 Wisconsin outbreak strain., Nat Commun 2017 05; 8(): 15483.

Faria NR, Quick J, Claro IM, Thézé J, de Jesus JG, Giovanetti M, Kraemer MUG, Hill SC, Black A, da Costa AC, Franco LC, Silva SP, Wu CH, Raghwani J, Cauchemez S, du Plessis L, Verotti MP, de Oliveira WK, Carmo EH, Coelho GE, Santelli ACFS, Vinhal LC, Henriques CM, Simpson JT, Loose M, Andersen KG, Grubaugh ND, Somasekar S, Chiu CY, Muñoz-Medina JE, Gonzalez-Bonilla CR, Arias CF, Lewis-Ximenez LL, Baylis SA, Chieppe AO, Aguiar SF, Fernandes CA, Lemos PS, Nascimento BLS, Monteiro HAO, Siqueira IC, de Queiroz MG, de Souza TR, Bezerra JF, Lemos MR, Pereira GF, Loudal D, Moura LC, Dhalia R, França RF, Magalhães T, Marques ET, Jaenisch T, Wallau GL, de Lima MC, Nascimento V, de Cerqueira EM, de Lima MM, Mascarenhas DL, Neto JPM, Levin AS, Tozetto-Mendoza TR, Fonseca SN, Mendes-Correa MC, Milagres FP, Segurado A, Holmes EC, Rambaut A, Bedford T, Nunes MRT, Sabino EC, Alcantara LCJ, Loman NJ, Pybus OG, , Establishment and cryptic transmission of Zika virus in Brazil and the Americas., Nature 2017 06; 546(7658): 406-410.

Bouchez V, AlBitar-Nehmé S, Novikov A, Guiso N, Caroff M, Bordetella holmesii: Lipid A Structures and Corresponding Genomic Sequences Comparison in Three Clinical Isolates and the Reference Strain ATCC 51541, Int J Mol Sci 2017 May;18(5).

Arthur RF, Gurley ES, Salje H, Bloomfield LS, Jones JH, Contact structure, mobility, environmental impact and behaviour: the importance of social forces to infectious disease dynamics and disease ecology, Philos. Trans. R. Soc. Lond., B, Biol. Sci. 2017 May;372(1719).

Dub T, Fontanet A, Zika virus and Guillain-Barré syndrome, Rev. Neurol. (Paris) 2017 06;173(6):361-363.

Courtejoie N, Durand B, Bournez L, Gorlier A, Bréard E, Sailleau C, Vitour D, Zientara S, Baurier F, Gourmelen C, Benoit F, Achour H, Milard C, Poliak S, Pagneux C, Viarouge C, Zanella G, Circulation of bluetongue virus 8 in French cattle, before and after the re-emergence in 2015, Transbound Emerg Dis 2018 Feb;65(1):281-284.

Le Flèche-Matéos A, Kügler JH, Hansen SH, Syldatk C, Hausmann R, Lomprez F, Vandenbogaert M, Manuguerra JC, Grimont PAD, Rouxiella badensis sp. nov. and Rouxiella silvae sp. nov. isolated from peat bog soil and emendation description of the genus Rouxiella., Int J Syst Evol Microbiol 2017 May; 67(5): 1255-1259.

Narni-Mancinelli E, Gauthier L, Baratin M, Guia S, Fenis A, Deghmane AE, Rossi B, Fourquet P, Escalière B, Kerdiles YM, Ugolini S, Taha MK, Vivier E, , Complement factor P is a ligand for the natural killer cell-activating receptor NKp46., Sci Immunol 2017 Apr; 2(10): .

Villa L, Feudi C, Fortini D, Brisse S, Passet V, Bonura C, Endimiani A, Mammina C, Ocampo AM, Jimenez JN, Doumith M, Woodford N, Hopkins K, Carattoli A, Diversity, virulence, and antimicrobial resistance of the KPC-producing Klebsiella pneumoniae ST307 clone, Microb Genom 2017 Apr;3(4):e000110.

Borrow R, Caugant DA, Ceyhan M, Christensen H, Dinleyici EC, Findlow J, Glennie L, Von Gottberg A, Kechrid A, Vázquez Moreno J, Razki A, Smith V, Taha MK, Tali-Maamar H, Zerouali K, , , Meningococcal disease in the Middle East and Africa: Findings and updates from the Global Meningococcal Initiative., J Infect 2017 07; 75(1): 1-11.

Rosain J, Hong E, Fieschi C, Martins PV, El Sissy C, Deghmane AE, Ouachée M, Thomas C, Launay D, de Pontual L, Suarez F, Moshous D, Picard C, Taha MK, Frémeaux-Bacchi V, , Strains Responsible for Invasive Meningococcal Disease in Patients With Terminal Complement Pathway Deficiencies., J Infect Dis 2017 04; 215(8): 1331-1338.

Verdonk F, Blet A, Mebazaa A, The new sepsis definition: limitations and contribution to research and diagnosis of sepsis, Curr Opin Anaesthesiol 2017 Apr;30(2):200-204.

Salje H, Lessler J, Maljkovic Berry I, Melendrez MC, Endy T, Kalayanarooj S, A-Nuegoonpipat A, Chanama S, Sangkijporn S, Klungthong C, Thaisomboonsuk B, Nisalak A, Gibbons RV, Iamsirithaworn S, Macareo LR, Yoon IK, Sangarsang A, Jarman RG, Cummings DA, Dengue diversity across spatial and temporal scales: Local structure and the effect of host population size, Science 2017 Mar;355(6331):1302-1306.

Heming N, Mazeraud A, Verdonk F, Bozza FA, Chrétien F, Sharshar T, Neuroanatomy of sepsis-associated encephalopathy, Crit Care 2017 Mar;21(1):65.

Whittaker R, Dias JG, Ramliden M, Ködmön C, Economopoulou A, Beer N, Pastore Celentano L, , The epidemiology of invasive meningococcal disease in EU/EEA countries, 2004-2014, Vaccine 2017 04;35(16):2034-2041.

Parent du Chatelet I, Deghmane AE, Antona D, Hong E, Fonteneau L, Taha MK, Lévy-Bruhl D, Characteristics and changes in invasive meningococcal disease epidemiology in France, 2006-2015, J. Infect. 2017 06;74(6):564-574.

Blin C, Passet V, Touchon M, Rocha EPC, Brisse S, Metabolic diversity of the emerging pathogenic lineages of Klebsiella pneumoniae, Environ. Microbiol. 2017 May;19(5):1881-1898.

Heard I, Tondeur L, Arowas L, Demazoin M, Falguières M, Parent Du Chatelet I, , Effectiveness of Human Papillomavirus Vaccination on Prevalence of Vaccine Genotypes in Young Sexually Active Women in France, J. Infect. Dis. 2017 03;215(5):757-763.

Vandelannoote K, Meehan CJ, Eddyani M, Affolabi D, Phanzu DM, Eyangoh S, Jordaens K, Portaels F, Mangas K, Seemann T, Marsollier L, Marion E, Chauty A, Landier J, Fontanet A, Leirs H, Stinear TP, de Jong BC, Multiple Introductions and Recent Spread of the Emerging Human Pathogen Mycobacterium ulcerans across Africa, Genome Biol Evol 2017 03;9(3):414-426.

Jusot JF, Neill DR, Waters EM, Bangert M, Collins M, Bricio Moreno L, Lawan KG, Moussa MM, Dearing E, Everett DB, Collard JM, Kadioglu A, Airborne dust and high temperatures are risk factors for invasive bacterial disease., J Allergy Clin Immunol 2017 Mar; 139(3): 977-986.e2.

Gachelin G, Garner P, Ferroni E, Verhave JP, Opinel A, Evidence and strategies for malaria prevention and control: a historical analysis., Malar J. 2018 Feb 27;17(1):96.

Williams AH, Wheeler R, Thiriau C, Haouz A, Taha MK, Boneca IG, , Bulgecin A: The Key to a Broad-Spectrum Inhibitor That Targets Lytic Transglycosylases., Antibiotics (Basel) 2017 Feb; 6(1): .

Deflesselle E, Verstuyft C, Petit AC, Hardy P, David DJ, Falissard B, Fève B, Rigal L, Becquemont L, Corruble E, Colle R, No impact of eight NTRK2 genetic polymorphisms on 6-month antidepressant efficacy in depressed patients, Pharmacogenomics 2017 Mar;18(4):349-357.

Flamand C, Fritzell C, Prince C, Abboud P, Ardillon V, Carvalho L, Demar M, Boukhari R, Papaix-Puech M, Elenga N, Rousset D, Matheus S, Nacher M, Quenel P, Djossou F, Epidemiological assessment of the severity of dengue epidemics in French Guiana, PLoS ONE 2017;12(2):e0172267.

Gougeon ML, Poirier-Beaudouin B, Durant J, Lebrun-Frenay C, Saïdi H, Seffer V, Ticchioni M, Chanalet S, Carsenti H, Harvey-Langton A, Laffon M, Cottalorda J, Pradier C, Dellamonica P, Vassallo M, HMGB1/anti-HMGB1 antibodies define a molecular signature of early stages of HIV-Associated Neurocognitive Isorders (HAND), Heliyon 2017 Feb;3(2):e00245.

Smith DR, Mideo N, Modelling the evolution of HIV-1 virulence in response to imperfect therapy and prophylaxis, Evol Appl 2017 Mar;10(3):297-309.

Taha MK, Hawkins JC, Liberator P, Deghmane AE, Andrew L, Hao L, Jones TR, McNeil LK, O'Neill RE, Perez JL, Jansen KU, Anderson AS, , Bactericidal activity of sera from adolescents vaccinated with bivalent rLP2086 against meningococcal serogroup B outbreak strains from France., Vaccine 2017 03; 35(11): 1530-1537.

Cornick JE, Tastan Bishop Ö, Yalcin F, Kiran AM, Kumwenda B, Chaguza C, Govindpershad S, Ousmane S, Senghore M, du Plessis M, Pluschke G, Ebruke C, McGee L, Sigaùque B, Collard JM, Bentley SD, Kadioglu A, Antonio M, von Gottberg A, French N, Klugman KP, Heyderman RS, Alderson M, Everett DB, The global distribution and diversity of protein vaccine candidate antigens in the highly virulent Streptococcus pnuemoniae serotype 1., Vaccine 2017 Feb; 35(6): 972-980.

Faye M, Dacheux L, Weidmann M, Diop SA, Loucoubar C, Bourhy H, Sall AA, Faye O, Development and validation of sensitive real-time RT-PCR assay for broad detection of rabies virus, J. Virol. Methods 2017 05;243:120-130.

Majlessi L, Sayes F, Bureau JF, Pawlik A, Michel V, Jouvion G, Huerre M, Severgnini M, Consolandi C, Peano C, Brosch R, Touati E, Leclerc C, Colonization with Helicobacter is concomitant with modified gut microbiota and drastic failure of the immune control of Mycobacterium tuberculosis, Mucosal Immunol 2017 Sep;10(5):1178-1189.

Rodrigues C, Novais Â, Sousa C, Ramos H, Coque TM, Cantón R, Lopes JA, Peixe L, , Elucidating constraints for differentiation of major human Klebsiella pneumoniae clones using MALDI-TOF MS., Eur J Clin Microbiol Infect Dis 2017 Feb; 36(2): 379-386.

Shirreff G, Wadood MZ, Vaz RG, Sutter RW, Grassly NC, Estimated Effect of Inactivated Poliovirus Vaccine Campaigns, Nigeria and Pakistan, January 2014-April 2016., Emerg Infect Dis 2017 Feb; 23(2): 258-263.

Filippone C, de Oliveira F, Betsem E, Schaeffer L, Fontanet A, Lemée V, Gessain A, Plantier JC, Simian Immunodeficiency Virus seroreactivity in inhabitants from rural Cameroon frequently in contact with non-human primates, Virology 2017 03;503:76-82.

Nikolay B, Salje H, Sturm-Ramirez K, Azziz-Baumgartner E, Homaira N, Ahmed M, Iuliano AD, Paul RC, Rahman M, Hossain MJ, Luby SP, Cauchemez S, Gurley ES, , Evaluating Hospital-Based Surveillance for Outbreak Detection in Bangladesh: Analysis of Healthcare Utilization Data., PLoS Med 2017 Jan; 14(1): e1002218.

Billard-Pomares T, Rouyer C, Walewski V, Badell-Ocando E, Dumas M, Zumelzu C, Jaureguy F, Brisse S, Caux F, Bouchaud O, Carbonnelle E, , Diagnosis in France of a Non-Toxigenic tox Gene-Bearing Strain of Corynebacterium diphtheriae in a Young Male Back From Senegal., Open Forum Infect Dis 2017 ; 4(1): ofw271.

Guilvout I, Brier S, Chami M, Hourdel V, Francetic O, Pugsley AP, Chamot-Rooke J, Huysmans GH, Prepore Stability Controls Productive Folding of the BAM-independent Multimeric Outer Membrane Secretin PulD., J Biol Chem 2017 Jan; 292(1): 328-338.

Nayagam S, Conteh L, Sicuri E, Shimakawa Y, Lemoine M, Hallett TB, Thursz M, , Community-based screening and treatment for chronic hepatitis B in sub-Saharan Africa – Authors’ reply., Lancet Glob Health 2017 Jan; 5(1): e35.

Ribeiro TG, Clermont D, Branquinho R, Machado E, Peixe L, Brisse S, , Citrobacter europaeus sp. nov., isolated from water and human faecal samples., Int J Syst Evol Microbiol 2017 Jan; 67(1): 170-173.

O'Brien DP, Durand D, Voegele A, Hourdel V, Davi M, Chamot-Rooke J, Vachette P, Brier S, Ladant D, Chenal A, Calmodulin fishing with a structurally disordered bait triggers CyaA catalysis., PLoS Biol 2017 Dec; 15(12): e2004486.

Nakoune E, Lampaert E, Ndjapou SG, Janssens C, Zuniga I, Van Herp M, Fongbia JP, Koyazegbe TD, Selekon B, Komoyo GF, Garba-Ouangole SM, Manengu C, Manuguerra JC, Kazanji M, Gessain A, Berthet N, , A Nosocomial Outbreak of Human Monkeypox in the Central African Republic., Open Forum Infect Dis 2017 ; 4(4): ofx168.

Gay N, Belmonte O, Collard JM, Halifa M, Issack MI, Mindjae S, Palmyre P, Ibrahim AA, Rasamoelina H, Flachet L, Filleul L, Cardinale E, Review of Antibiotic Resistance in the Indian Ocean Commission: A Human and Animal Health Issue., Front Public Health 2017 ; 5(): 162.

Cooper LV, Boukary RM, Aseffa A, Mihret W, Collard JM, Daugla D, Hodgson A, Sokhna C, Omotara B, Sow S, Quaye SL, Diallo K, Manigart O, Maiden MCJ, Findlow H, Borrow R, Stuart JM, Greenwood BM, Trotter CL, Investigation of correlates of protection against pharyngeal carriage of Neisseria meningitidis genogroups W and Y in the African meningitis belt., PLoS One 2017 ; 12(8): e0182575.

Hoang Quoc C, Henrik S, Isabel RB, In-Kyu Y, Chau NV, Hung NT, Tuan HM, Lan PT, Willis B, Nisalak A, Kalayanarooj S, Cummings DA, Simmons CP, Synchrony of Dengue Incidence in Ho Chi Minh City and Bangkok, PLoS Negl Trop Dis 2016 Dec;10(12):e0005188.

Kraemer MUG, Faria NR, Reiner RC, Golding N, Nikolay B, Stasse S, Johansson MA, Salje H, Faye O, Wint GRW, Niedrig M, Shearer FM, Hill SC, Thompson RN, Bisanzio D, Taveira N, Nax HH, Pradelski BSR, Nsoesie EO, Murphy NR, Bogoch II, Khan K, Brownstein JS, Tatem AJ, de Oliveira T, Smith DL, Sall AA, Pybus OG, Hay SI, Cauchemez S, , Spread of yellow fever virus outbreak in Angola and the Democratic Republic of the Congo 2015-16: a modelling study., Lancet Infect Dis 2017 03; 17(3): 330-338.

Chiche A, Le Roux I, von Joest M, Sakai H, Aguín SB, Cazin C, Salam R, Fiette L, Alegria O, Flamant P, Tajbakhsh S, Li H, Injury-Induced Senescence Enables In Vivo Reprogramming in Skeletal Muscle, Cell Stem Cell 2017 03;20(3):407-414.e4.

Alari A, Chaussade H, Domenech De Cellès M, Le Fouler L, Varon E, Opatowski L, Guillemot D, Watier L, Impact of pneumococcal conjugate vaccines on pneumococcal meningitis cases in France between 2001 and 2014: a time series analysis, BMC Med 2016 Dec;14(1):211.

Ben Khalifa Y, Luco S, Besson B, Sonthonnax F, Archambaud M, Grimes JM, Larrous F, Bourhy H, The matrix protein of rabies virus binds to RelAp43 to modulate NF-κB-dependent gene expression related to innate immunity, Sci Rep 2016 12;6:39420.

Cécile Troupin, Laurent Dacheux, Marion Tanguy, Claude Sabeta, Hervé Blanc, Christiane Bouchier, Marco Vignuzzi, Sebastián Duchene, Edward C Holmes, Hervé Bourhy, Large-Scale Phylogenomic Analysis Reveals the Complex Evolutionary History of Rabies Virus in Multiple Carnivore Hosts., PLoS Pathogens, 2016, 12 (12), pp.e1006041. ⟨10.1371/journal.ppat.1006041.s014⟩.

Rasoanandrasana S, Raberahona M, Milenkov M, Rakotomahefa Narison ML, Ranaivo Rabetokotany F, Rakotovao L, Randria MJD, Hong E, Paranhos-Baccalà G, Taha MK, Rakoto-Andrianarivelo M, , Resurgence of Neisseria meningitidis serogroup W ST-11 (cc11) in Madagascar, 2015-2016., Int J Infect Dis 2017 Feb; 55(): 1-3.

Melot B, Brisse S, Breurec S, Passet V, Malpote E, Lamaury I, Thiery G, Hoen B, Community-acquired meningitis caused by a CG86 hypervirulent Klebsiella pneumoniae strain: first case report in the Caribbean, BMC Infect. Dis. 2016 Dec;16(1):736.

Maïnassara HB, Oumarou GI, Issaka B, Sidiki A, Idi I, Pelat JM, Fontanet A, Mueller JE, Evaluation of response strategies against epidemics due to Neisseria meningitidis C in Niger, Trop. Med. Int. Health 2017 02;22(2):196-204.

Damien Correia , Olivia Doppelt-Azeroual , Jean-Baptiste Denis , Mathias Vandenbogaert , Valérie Caro, MetaGenSense: A web-application for analysis and exploration of high throughput sequencing metagenomic data, Correia D, Doppelt-Azeroual O, Denis JB et al. MetaGenSense: A web-application for analysis and exploration of high throughput sequencing metagenomic data. F1000Research 2016, 4:86 (doi: 10.12688/f1000research.6139.3) .

, Household transmission of Neisseria meningitidis in the African meningitis belt: a longitudinal cohort study., Lancet Glob Health 2016 Dec; 4(12): e989-e995.

Kuijpers LM, Le Hello S, Fawal N, Fabre L, Tourdjman M, Dufour M, Sar D, Kham C, Phe T, Vlieghe E, Bouchier C, Jacobs J, Weill FX, Genomic analysis of Salmonella enterica serotype Paratyphi A during an outbreak in Cambodia, 2013-2015, Microb Genom 2016 Nov;2(11):e000092.

Borrow R, Alarcón P, Carlos J, Caugant DA, Christensen H, Debbag R, De Wals P, Echániz-Aviles G, Findlow J, Head C, Holt D, Kamiya H, Saha SK, Sidorenko S, Taha MK, Trotter C, Vázquez Moreno JA, von Gottberg A, Sáfadi MA, , , The Global Meningococcal Initiative: global epidemiology, the impact of vaccines on meningococcal disease and the importance of herd protection., Expert Rev Vaccines 2017 04; 16(4): 313-328.

Grantz KH, Rane MS, Salje H, Glass GE, Schachterle SE, Cummings DA, Disparities in influenza mortality and transmission related to sociodemographic factors within Chicago in the pandemic of 1918, Proc. Natl. Acad. Sci. U.S.A. 2016 Nov;113(48):13839-13844.

Lebreton A, Stavru F, Brisse S, Cossart P, 1926-2016: 90 Years of listeriology, Microbes Infect. 2016 Dec;18(12):711-723.

Dreyer M, Aguilar-Bultet L, Rupp S, Guldimann C, Stephan R, Schock A, Otter A, Schüpbach G, Brisse S, Lecuit M, Frey J, Oevermann A, , Listeria monocytogenes sequence type 1 is predominant in ruminant rhombencephalitis., Sci Rep 2016 Nov; 6(): 36419.

Padget M, Tamarelle J, Herindrainy P, Ndir A, Diene Sarr F, Richard V, Piola P, Guillemot D, Delarocque-Astagneau E, A community survey of antibiotic consumption among children in Madagascar and Senegal: the importance of healthcare access and care quality., J Antimicrob Chemother 2017 Feb; 72(2): 564-573.

Reis PA, Alexandre PCB, D'Avila JC, Siqueira LD, Antunes B, Estato V, Tibiriça EV, Verdonk F, Sharshar T, Chrétien F, Castro-Faria-Neto HC, Bozza FA, Statins prevent cognitive impairment after sepsis by reverting neuroinflammation, and microcirculatory/endothelial dysfunction, Brain Behav. Immun. 2017 Feb;60:293-303.

Chaguza C, Cornick JE, Harris SR, Andam CP, Bricio-Moreno L, Yang M, Yalcin F, Ousmane S, Govindpersad S, Senghore M, Ebruke C, Du Plessis M, Kiran AM, Pluschke G, Sigauque B, McGee L, Klugman KP, Turner P, Corander J, Parkhill J, Collard JM, Antonio M, von Gottberg A, Heyderman RS, French N, Kadioglu A, Hanage WP, Everett DB, Bentley SD, Understanding pneumococcal serotype 1 biology through population genomic analysis., BMC Infect Dis 2016 Nov; 16(1): 649.

Salje H, Lessler J, Paul KK, Azman AS, Rahman MW, Rahman M, Cummings D, Gurley ES, Cauchemez S, How social structures, space, and behaviors shape the spread of infectious diseases using chikungunya as a case study, Proc. Natl. Acad. Sci. U.S.A. 2016 11;113(47):13420-13425.

Hong E, Terrade A, Taha MK, , Immunogenicity and safety among laboratory workers vaccinated with Bexsero® vaccine., Hum Vaccin Immunother 2017 03; 13(3): 645-648.

Azman AS, Parker LA, Rumunu J, Tadesse F, Grandesso F, Deng LL, Lino RL, Bior BK, Lasuba M, Page AL, Ontweka L, Llosa AE, Cohuet S, Pezzoli L, Sodjinou DV, Abubakar A, Debes AK, Mpairwe AM, Wamala JF, Jamet C, Lessler J, Sack DA, Quilici ML, Ciglenecki I, Luquero FJ, Effectiveness of one dose of oral cholera vaccine in response to an outbreak: a case-cohort study, Lancet Glob Health 2016 Nov;4(11):e856-e863.

Bilal A, Taha MK, Caeymaex L, Cohen R, Levy C, Durrmeyer X, , , Neonatal Meningococcal Meningitis In France From 2001 To 2013, Pediatr. Infect. Dis. J. 2016 11;35(11):1270-1272.

Giles-Vernick T, Hejoaka F, Sanou A, Shimakawa Y, Bamba I, Traoré A, , Barriers to Linkage to Care for Hepatitis B Virus Infection: A Qualitative Analysis in Burkina Faso, West Africa., Am J Trop Med Hyg 2016 Dec; 95(6): 1368-1375.

Borrow R, Lee JS, Vázquez JA, Enwere G, Taha MK, Kamiya H, Kim HM, Jo DS, , , Meningococcal disease in the Asia-Pacific region: Findings and recommendations from the Global Meningococcal Initiative., Vaccine 2016 11; 34(48): 5855-5862.

Durand E, Watier L, Lécu A, Fix M, Weiss JJ, Chevignard M, Pradat-Diehl P, Traumatic brain injury among female offenders in a prison population: results of the FleuryTBI study, Brain Behav 2017 Jan;7(1):e00535.

Martin RM, Cao J, Brisse S, Passet V, Wu W, Zhao L, Malani PN, Rao K, Bachman MA, Molecular Epidemiology of Colonizing and Infecting Isolates of Klebsiella pneumoniae, mSphere 2016 Sep-Oct;1(5).

Deghmane AE, Hong E, Taha MK, , Emergence of meningococci with reduced susceptibility to third-generation cephalosporins., J Antimicrob Chemother 2017 01; 72(1): 95-98.

Moura A, Criscuolo A, Pouseele H, Maury MM, Leclercq A, Tarr C, Björkman JT, Dallman T, Reimer A, Enouf V, Larsonneur E, Carleton H, Bracq-Dieye H, Katz LS, Jones L, Touchon M, Tourdjman M, Walker M, Stroika S, Cantinelli T, Chenal-Francisque V, Kucerova Z, Rocha EP, Nadon C, Grant K, Nielsen EM, Pot B, Gerner-Smidt P, Lecuit M, Brisse S, , Whole genome-based population biology and epidemiological surveillance of Listeria monocytogenes., Nat Microbiol 2016 Oct; 2(): 16185.

Salje H, Cummings DA, Lessler J, Estimating infectious disease transmission distances using the overall distribution of cases, Epidemics 2016 Dec;17:10-18.

Rupp S, Ambata P, Narat V, Giles-Vernick T, Beyond the Cut Hunter: A Historical Epidemiology of HIV Beginnings in Central Africa, Ecohealth 2016 12;13(4):661-671.

Wong VK, Baker S, Connor TR, Pickard D, Page AJ, Dave J, Murphy N, Holliman R, Sefton A, Millar M, Dyson ZA, Dougan G, Holt KE,, An extended genotyping framework for Salmonella enterica serovar Typhi, the cause of human typhoid, Nat Commun 2016 Oct;7:12827.

Léchenne M, Naïssengar K, Lepelletier A, Alfaroukh IO, Bourhy H, Zinsstag J, Dacheux L, Validation of a Rapid Rabies Diagnostic Tool for Field Surveillance in Developing Countries, PLoS Negl Trop Dis 2016 Oct;10(10):e0005010.

Njamkepo E, Fawal N, Tran-Dien A, Hawkey J, Strockbine N, Jenkins C, Talukder KA, Bercion R, Kuleshov K, Kolínská R, Russell JE, Kaftyreva L, Accou-Demartin M, Karas A, Vandenberg O, Mather AE, Mason CJ, Page AJ, Ramamurthy T, Bizet C, Gamian A, Carle I, Sow AG, Bouchier C, Wester AL, Lejay-Collin M, Fonkoua MC, Le Hello S, Blaser MJ, Jernberg C, Ruckly C, Mérens A, Page AL, Aslett M, Roggentin P, Fruth A, Denamur E, Venkatesan M, Bercovier H, Bodhidatta L, Chiou CS, Clermont D, Colonna B, Egorova S, Pazhani GP, Ezernitchi AV, Guigon G, Harris SR, Izumiya H, Korzeniowska-Kowal A, Lutyńska A, Gouali M, Grimont F, Langendorf C, Marejková M, Peterson LA, Perez-Perez G, Ngandjio A, Podkolzin A, Souche E, Makarova M, Shipulin GA, Ye C, Žemličková H, Herpay M, Grimont PA, Parkhill J, Sansonetti P, Holt KE, Brisse S, Thomson NR, Weill FX, Erratum: Global phylogeography and evolutionary history of Shigella dysenteriae type 1, Nat Microbiol 2016 10;1(11):16209.

Kretz CB, Retchless AC, Sidikou F, Issaka B, Ousmane S, Schwartz S, Tate AH, Pana A, Njanpop-Lafourcade BM, Nzeyimana I, Nse RO, Deghmane AE, Hong E, Brynildsrud OB, Novak RT, Meyer SA, Oukem-Boyer OOM, Ronveaux O, Caugant DA, Taha MK, Wang X, , Whole-Genome Characterization of Epidemic Neisseria meningitidis Serogroup C and Resurgence of Serogroup W, Niger, 2015, Emerging Infect. Dis. 2016 10;22(10):1762-1768.

Zapun A, Morlot C, Taha MK, , Resistance to β-Lactams in Neisseria ssp Due to Chromosomally Encoded Penicillin-Binding Proteins., Antibiotics (Basel) 2016 Sep; 5(4): .

Wong VK, Holt KE, Okoro C, Baker S, Pickard DJ, Marks F, Page AJ, Olanipekun G, Munir H, Alter R, Fey PD, Feasey NA, Weill FX, Le Hello S, Hart PJ, Kariuki S, Breiman RF, Gordon MA, Heyderman RS, Jacobs J, Lunguya O, Msefula C, MacLennan CA, Keddy KH, Smith AM, Onsare RS, De Pinna E, Nair S, Amos B, Dougan G, Obaro S, Molecular Surveillance Identifies Multiple Transmissions of Typhoid in West Africa, PLoS Negl Trop Dis 2016 Sep;10(9):e0004781.

Maïnassara HB, Paireau J, Idi I, Jusot JF, Moulia Pelat JP, Ouwe Missi Oukem-Boyer O, Fontanet A, Mueller JE, Serogroup-Specific Characteristics of Localized Meningococcal Meningitis Epidemics in Niger 2002-2012 and 2015: Analysis of Health Center Level Surveillance Data, PLoS ONE 2016;11(9):e0163110.

Antunes A, Derkaoui M, Terrade A, Denizon M, Deghmane AE, Deutscher J, Delany I, Taha MK, , The Phosphocarrier Protein HPr Contributes to Meningococcal Survival during Infection., PLoS One ; 11(9): e0162434.

Keane E, Funk AL, Shimakawa Y, , Systematic review with meta-analysis: the risk of mother-to-child transmission of hepatitis B virus infection in sub-Saharan Africa., Aliment Pharmacol Ther 2016 Nov; 44(10): 1005-1017.

Matheus S, Boukhari R, Labeau B, Ernault V, Bremand L, Kazanji M, Rousset D, Specificity of Dengue NS1 Antigen in Differential Diagnosis of Dengue and Zika Virus Infection, Emerging Infect. Dis. 2016 09;22(9):1691-3.

Beaufils E, Dommergues MA, Gaillat J, Guiso N, Knezovic-Daniel N, Pinquier D, Riethmuller D, [Pertussis: Where do we stand 10years after the introduction of cocooning vaccination strategy in France?], Gynecol Obstet Fertil 2016 Sep;.

Krejbich-Trotot P, Belarbi E, Ralambondrainy M, El-Kalamouni C, Viranaicken W, Roques P, Desprès P, Gadea G, The growth of arthralgic Ross River virus is restricted in human monocytic cells, Virus Res. 2016 Oct;225:64-68.

Baker KS, Dallman TJ, Behar A, Weill FX, Gouali M, Sobel J, Fookes M, Valinsky L, Gal-Mor O, Connor TR, Nissan I, Bertrand S, Parkhill J, Jenkins C, Cohen D, Thomson NR, Travel- and Community-Based Transmission of Multidrug-Resistant Shigella sonnei Lineage among International Orthodox Jewish Communities, Emerging Infect. Dis. 2016 Sep;22(9):1545-53.

Chevignard M, Francillette L, Toure H, Brugel D, Meyer P, Vannier AL, Opatowski M, Watier L, Academic outcome, participation and health-related quality of life following childhood severe traumatic brain injury: Results of a prospective longitudinal study: The seven-year follow-up of the TGE cohort, Ann Phys Rehabil Med 2016 Sep;59S:e133.

Bachmeyer C, Galmiche S, Fayand A, Degachi A, Georgin-Lavialle S, , Mycophenolate Mofetil in Refractory Cutaneous Lupus Erythematosus: No Definitive Evidence., J Rheumatol 2016 09; 43(9): 1766.

Benamrouche N, Hasnaoui S, Badell E, Guettou B, Lazri M, Guiso N, Rahal K, Microbiological and molecular characterization of Corynebacterium diphtheriae isolated in Algeria between 1992 and 2015, Clin. Microbiol. Infect. 2016 Aug;.

Dallman T, Inns T, Jombart T, Ashton P, Loman N, Chatt C, Messelhaeusser U, Rabsch W, Simon S, Nikisins S, Bernard H, le Hello S, Jourdan da-Silva N, Kornschober C, Mossong J, Hawkey P, de Pinna E, Grant K, Cleary P, Phylogenetic structure of European Salmonella Enteritidis outbreak correlates with national and international egg distribution network, Microb Genom 2016 Aug;2(8):e000070.

de Laval F, Matheus S, Maquart M, Yvrard E, Barthes N, Combes C, Rousset D, Leparc-Goffart I, Briolant S, Prospective Zika virus disease cohort: systematic screening, Lancet 2016 Aug;388(10047):868.

Connor TR, Owen SV, Langridge G, Connell S, Nair S, Reuter S, Dallman TJ, Corander J, Tabing KC, Le Hello S, Fookes M, Doublet B, Zhou Z, Feltwell T, Ellington MJ, Herrera S, Gilmour M, Cloeckaert A, Achtman M, Parkhill J, Wain J, De Pinna E, Weill FX, Peters T, Thomson N, What’s in a Name? Species-Wide Whole-Genome Sequencing Resolves Invasive and Noninvasive Lineages of Salmonella enterica Serotype Paratyphi B, MBio 2016;7(4).

Sidikou F, Zaneidou M, Alkassoum I, Schwartz S, Issaka B, Obama R, Lingani C, Tate A, Ake F, Sakande S, Ousmane S, Zanguina J, Seidou I, Nzeyimana I, Mounkoro D, Abodji O, Wang X, Taha MK, Moulia-Pelat JP, Pana A, Kadade G, Ronveaux O, Novak R, Oukem-Boyer OOM, Meyer S, , , Emergence of epidemic Neisseria meningitidis serogroup C in Niger, 2015: an analysis of national surveillance data., Lancet Infect Dis 2016 Nov; 16(11): 1288-1294.

Feasey NA, Hadfield J, Keddy KH, Dallman TJ, Jacobs J, Deng X, Wigley P, Barquist Barquist L, Langridge GC, Feltwell T, Harris SR, Mather AE, Fookes M, Aslett M, Msefula C, Kariuki S, Maclennan CA, Onsare RS, Weill FX, Le Hello S, Smith AM, McClelland M, Desai P, Parry CM, Cheesbrough J, French N, Campos J, Chabalgoity JA, Betancor L, Hopkins KL, Nair S, Humphrey TJ, Lunguya O, Cogan TA, Tapia MD, Sow SO, Tennant SM, Bornstein K, Levine MM, Lacharme-Lora L, Everett DB, Kingsley RA, Parkhill J, Heyderman RS, Dougan G, Gordon MA, Thomson NR, Distinct Salmonella Enteritidis lineages associated with enterocolitis in high-income settings and invasive disease in low-income settings, Nat. Genet. 2016 Aug;.

Saguer A, Smaoui H, Taha MK, Kechrid A, Characterization of invasive Neisseria meningitidis strains isolated at the Children’s Hospital of Tunis, Tunisia, East. Mediterr. Health J. 2016 Aug;22(5):343-9.

Teyssières E, Corre JP, Antunes S, Rougeot C, Dugave C, Jouvion G, Claudon P, Mikaty G, Douat C, Goossens PL, Guichard G, Proteolytically stable foldamer mimics of host-defense peptides with protective activities in a murine model of bacterial infection, J. Med. Chem. 2016 Aug;.

Nouhin J, Prak S, Madec Y, Barennes H, Weissel R, Hok K, Pavio N, Rouet F, Hepatitis E virus antibody prevalence, RNA frequency, and genotype among blood donors in Cambodia (Southeast Asia), Transfusion 2016 Oct;56(10):2597-2601.

Lemoine M, Shimakawa Y, Njie R, Taal M, Ndow G, Chemin I, Ghosh S, Njai HF, Jeng A, Sow A, Toure-Kane C, Mboup S, Suso P, Tamba S, Jatta A, Sarr L, Kambi A, Stanger W, Nayagam S, Howell J, Mpabanzi L, Nyan O, Corrah T, Whittle H, Taylor-Robinson SD, D'Alessandro U, Mendy M, Thursz MR, , , Acceptability and feasibility of a screen-and-treat programme for hepatitis B virus infection in The Gambia: the Prevention of Liver Fibrosis and Cancer in Africa (PROLIFICA) study., Lancet Glob Health 2016 Aug; 4(8): e559-67.

Nayagam S, Conteh L, Sicuri E, Shimakawa Y, Suso P, Tamba S, Njie R, Njai H, Lemoine M, Hallett TB, Thursz M, , Cost-effectiveness of community-based screening and treatment for chronic hepatitis B in The Gambia: an economic modelling analysis., Lancet Glob Health 2016 Aug; 4(8): e568-78.

Ploquin MJ, Madec Y, Casrouge A, Huot N, Passaes C, Lécuroux C, Essat A, Boufassa F, Jacquelin B, Jochems SP, Petitjean G, Angin M, Gärtner K, Garcia-Tellez T, Noël N, Booiman T, Boeser-Nunnink BD, Roques P, Saez-Cirion A, Vaslin B, Dereudre-Bosquet N, Barré-Sinoussi F, Ghislain M, Rouzioux C, Lambotte O, Albert ML, Goujard C, Kootstra N, Meyer L, Müller-Trutwin MC, , Elevated Basal Pre-infection CXCL10 in Plasma and in the Small Intestine after Infection Are Associated with More Rapid HIV/SIV Disease Onset., PLoS Pathog 2016 08; 12(8): e1005774.

Tauziède-Espariat A, Wassef M, Adle-Biassette H, Alanio A, Bretagne S, Lanternier F, Boui M, Bouchaud O, Vironneau P, Kania R, Jouvion G, Chrétien F, Classe M, , [Sinonasal fungal infections are not exclusively due to mucorales and Aspergillus!]., Ann Pathol 2016 Aug; 36(4): 245-51.

Bale J, Meunier D, Weill FX, dePinna E, Peters T, Nair S, Characterisation of new Salmonella serovars by whole genome sequencing and traditional typing techniques, J. Med. Microbiol. 2016 Aug;.

Czobor I, Novais Â, Rodrigues C, Chifiriuc MC, Mihăescu G, Lazăr V, Peixe L, , Efficient transmission of IncFIIY and IncL plasmids and Klebsiella pneumoniae ST101 clone producing OXA-48, NDM-1 or OXA-181 in Bucharest hospitals., Int J Antimicrob Agents 2016 Aug; 48(2): 223-4.

Guimarães LC, Viana MV, Benevides LJ, Mariano DC, Veras AA, Sá PH, Rocha FS, Vilas Boas PC, Soares SC, Barbosa MS, Guiso N, Badell E, Azevedo V, Ramos RT, Silva A, Draft Genome Sequence of Toxigenic Corynebacterium ulcerans Strain 03-8664 Isolated from a Human Throat, Genome Announc 2016 Jul;4(4).

Breurec S, Criscuolo A, Diancourt L, Rendueles O, Vandenbogaert M, Passet V, Caro V, Rocha EP, Touchon M, Brisse S, Genomic epidemiology and global diversity of the emerging bacterial pathogen Elizabethkingia anophelis, Sci Rep 2016;6:30379.

Derkaoui M, Antunes A, Nait Abdallah J, Poncet S, Mazé A, Ma Pham QM, Mokhtari A, Deghmane AE, Joyet P, Taha MK, Deutscher J, Transport and Catabolism of Carbohydrates by Neisseria meningitidis, J. Mol. Microbiol. Biotechnol. 2016;26(5):320-32.

Cauchemez S, Nouvellet P, Cori A, Jombart T, Garske T, Clapham H, Moore S, Mills HL, Salje H, Collins C, Rodriquez-Barraquer I, Riley S, Truelove S, Algarni H, Alhakeem R, AlHarbi K, Turkistani A, Aguas RJ, Cummings DA, Van Kerkhove MD, Donnelly CA, Lessler J, Fraser C, Al-Barrak A, Ferguson NM, Unraveling the drivers of MERS-CoV transmission, Proc. Natl. Acad. Sci. U.S.A. 2016 08;113(32):9081-6.

Cauchemez S, Besnard M, Garel C, Fontanet A, Mallet HP, Could clinical symptoms be a predictor of complications in Zika virus infection? – Authors’ reply, Lancet 2016 Jul;388(10042):338-339.

Brault JB, Khou C, Basset J, Coquand L, Fraisier V, Frenkiel MP, Goud B, Manuguerra JC, Pardigon N, Baffet AD, Comparative Analysis Between Flaviviruses Reveals Specific Neural Stem Cell Tropism for Zika Virus in the Mouse Developing Neocortex, EBioMedicine. 2016 Jul 16. pii: S2352-3964(16)30323-1..

Jouvion G, Corre JP, Khun H, Moya-Nilges M, Roux P, Latroche C, Tournier JN, Huerre M, Chrétien F, Goossens PL, Physical sequestration of Bacillus anthracis in the pulmonary capillaries in terminal infection, J. Infect. Dis. 2016 Mar;.

Lessler J, Chaisson LH, Kucirka LM, Bi Q, Grantz K, Salje H, Carcelen AC, Ott CT, Sheffield JS, Ferguson NM, Cummings DA, Metcalf CJ, Rodriguez-Barraquer I, Assessing the global threat from Zika virus, Science 2016 Aug;353(6300):aaf8160.

Daudens-Vaysse E, Ledrans M, Gay N, Ardillon V, Cassadou S, Najioullah F, Leparc-Goffart I, Rousset D, Herrmann C, Cesaire R, Maquart M, Flusin O, Matheus S, Huc-Anaïs P, Jaubert J, Criquet-Hayot A, Hoen B, Djossou F, Locatelli-Jouans C, Blateau A, McKenzie AM, Melin M, Saint-Martin P, Dorléans F, Suivant C, Carvalho L, Petit-Sinturel M, Andrieu A, Noël H, Septfons A, Gallay A, Paty MC, Filleul L, Cabié A, , Zika emergence in the French Territories of America and description of first confirmed cases of Zika virus infection on Martinique, November 2015 to February 2016, Euro Surveill. 2016 Jul;21(28).

Hourdel V, Volant S, O'Brien DP, Chenal A, Chamot-Rooke J, Dillies MA, Brier S, MEMHDX: an interactive tool to expedite the statistical validation and visualization of large HDX-MS datasets., Bioinformatics 2016 Nov; 32(22): 3413-3419.

Imai N, Dorigatti I, Cauchemez S, Ferguson NM, Estimating Dengue Transmission Intensity from Case-Notification Data from Multiple Countries, PLoS Negl Trop Dis 2016 07;10(7):e0004833.

Farra A, Frank T, Tondeur L, Bata P, Gody JC, Onambele M, Rafaï C, Vray M, Breurec S, High rate of faecal carriage of extended-spectrum β-lactamase-producing Enterobacteriaceae in healthy children in Bangui, Central African Republic, Clin. Microbiol. Infect. 2016 Oct;22(10):891.e1-891.e4.

Shimakawa Y, Bonnard P, El Kassas M, Abdel-Hamid M, Esmat G, Fontanet A, , Diagnostic accuracy of the γ-glutamyl transpeptidase to platelet ratio to predict liver fibrosis in Egyptian patients with HCV genotype 4., Gut 2016 Sep; 65(9): 1577-8.

Taieb F, Tram TH, Ho HT, Pham VA, Nguyen L, Pham BH, Tong LA, Tuaillon E, Delaporte E, Nguyen AT, Bui DD, Do N, Madec Y, Evaluation of Two Techniques for Viral Load Monitoring Using Dried Blood Spot in Routine Practice in Vietnam (French National Agency for AIDS and Hepatitis Research 12338)., Open Forum Infect Dis 2016 Sep; 3(3): ofw142.

Dacheux L, Larrous F, Lavenir R, Lepelletier A, Faouzi A, Troupin C, Nourlil J, Buchy P, Bourhy H, Dual Combined Real-Time Reverse Transcription Polymerase Chain Reaction Assay for the Diagnosis of Lyssavirus Infection, PLoS Negl Trop Dis 2016 07;10(7):e0004812.

Céline M. Gossner, Simon Le Hello, Birgitta de Jong, Per Rolfhamre, Daniel Faensen, François-Xavier Weill, Johan Giesecke, Around the World in 1,475 Salmonella Geo-serotypes, Emerg Infect Dis, 2016 Jul; 22(7):1298-1302.

Ribadeau-Dumas F, Cliquet F, Gautret P, Robardet E, Le Pen C, Bourhy H, Travel-Associated Rabies in Pets and Residual Rabies Risk, Western Europe, Emerging Infect. Dis. 2016 07;22(7):1268-71.

Vázquez JA, Taha MK, Findlow J, Gupta S, Borrow R, Global Meningococcal Initiative: guidelines for diagnosis and confirmation of invasive meningococcal disease, Epidemiol. Infect. 2016 10;144(14):3052-3057.

Fontanet A, Cao-Lormeau VM, Dub T, Mallet HP, Ghawché F, Association between Guillain-Barré syndrome and Zika virus infection – Authors’ reply, Lancet 2016 Jun;387(10038):2600.

Le Bourgeois M, Ferroni A, Leruez-Ville M, Varon E, Thumerelle C, Brémont F, Fayon MJ, Delacourt C, Ligier C, Watier L, Guillemot D, , Nonsteroidal Anti-Inflammatory Drug without Antibiotics for Acute Viral Infection Increases the Empyema Risk in Children: A Matched Case-Control Study, J. Pediatr. 2016 08;175:47-53.e3.

Belkacem N, Hong E, Antunes A, Terrade A, Deghmane AE, Taha MK, , Use of Animal Models To Support Revising Meningococcal Breakpoints of β-Lactams., Antimicrob Agents Chemother 2016 07; 60(7): 4023-7.

Verdonk F, Roux P, Flamant P, Fiette L, Bozza FA, Simard S, Lemaire M, Plaud B, Shorte SL, Sharshar T, Chrétien F, Danckaert A, , Phenotypic clustering: a novel method for microglial morphology analysis., J Neuroinflammation 2016 06; 13(1): 153.

Reich NG, Lauer SA, Sakrejda K, Iamsirithaworn S, Hinjoy S, Suangtho P, Suthachana S, Clapham HE, Salje H, Cummings DA, Lessler J, Challenges in Real-Time Prediction of Infectious Disease: A Case Study of Dengue in Thailand, PLoS Negl Trop Dis 2016 Jun;10(6):e0004761.

Kandeel A, Genedy M, El-Refai S, Funk AL, Fontanet A, Talaat M, The prevalence of hepatitis C virus infection in Egypt 2015: implications for future policy on prevention and treatment, Liver Int. 2016 Jun;.

Quillay H, El Costa H, Duriez M, Marlin R, Cannou C, Madec Y, de Truchis C, Rahmati M, Barré-Sinoussi F, Nugeyre MT, Menu E, NK cells control HIV-1 infection of macrophages through soluble factors and cellular contacts in the human decidua, Retrovirology 2016 Jun;13(1):39.

Thomas E, Bertolotti A, Barreau A, Klisnick J, Tournebize P, Borgherini G, Zemali N, Jouvion G, Bretagne S, Picot S, IPF-07 – De la phaeohyphomycose disséminée à la chromoblastomycose : une étude rétrospective sur 15 ans, Med Mal Infect 2016 Jun;46(4 Suppl 1):69.

Chaussade H, Chandenier J, Bernard L, Cazals X, Gruson B, Bougnoux M, Jouvion G, Lortholary O, Lanternier F, IPF-04 – Étude rétrospective nationale sur les infections du système nerveux central à Candida, Med Mal Infect 2016 Jun;46(4 Suppl 1):68.

Mazeraud A, Pascal Q, Verdonk F, Heming N, Chrétien F, Sharshar T, Neuroanatomy and Physiology of Brain Dysfunction in Sepsis, Clin. Chest Med. 2016 06;37(2):333-45.

Diallo K, Trotter C, Timbine Y, Tamboura B, Sow SO, Issaka B, Dano ID, Collard JM, Dieng M, Diallo A, Mihret A, Ali OA, Aseffa A, Quaye SL, Bugri A, Osei I, Gamougam K, Mbainadji L, Daugla DM, Gadzama G, Sambo ZB, Omotara BA, Bennett JS, Rebbetts LS, Watkins ER, Nascimento M, Woukeu A, Manigart O, Borrow R, Stuart JM, Greenwood BM, Maiden MCJ, Pharyngeal carriage of Neisseria species in the African meningitis belt., J Infect 2016 Jun; 72(6): 667-677.

Guiso N, Wirsing von König CH, Surveillance of pertussis: methods and implementation, Expert Rev Anti Infect Ther 2016 Jul;14(7):657-67.

Randriamaherijaona S, Nepomichene T, Assoukpa J, Madec Y, Boyer S, First evaluation of bendiocarb in experimental huts using different substrates in Madagascar, Malar. J. 2016 May;15(1):293.

Padget M, Guillemot D, Delarocque-Astagneau E, Measuring antibiotic consumption in low-income countries: a systematic review and integrative approach, Int. J. Antimicrob. Agents 2016 Jul;48(1):27-32.

Gresnigt MS, Rekiki A, Rasid O, Savers A, Jouvion G, Dannaoui E, Parlato M, Fitting C, Brock M, Cavaillon JM, van de Veerdonk FL, Ibrahim-Granet O, Reducing hypoxia and inflammation during invasive pulmonary aspergillosis by targeting the Interleukin-1 receptor, Sci Rep 2016;6:26490.

Lessler J, Salje H, Grabowski MK, Cummings DA, Measuring Spatial Dependence for Infectious Disease Epidemiology, PLoS ONE 2016;11(5):e0155249.

Guillot S, Guiso N, Follow-Up of External Quality Controls for PCR-Based Diagnosis of Whooping Cough in a Hospital Laboratory Network (Renacoq) and in Other Hospital and Private Laboratories in France, J. Clin. Microbiol. 2016 Aug;54(8):2169-71.

Miyahara R, Jasseh M, Gomez P, Shimakawa Y, Greenwood B, Keita K, Ceesay S, D'Alessandro U, Roca A, , Barriers to timely administration of birth dose vaccines in The Gambia, West Africa., Vaccine 2016 Jun; 34(29): 3335-41.

Taha MK, Claus H, Lappann M, Veyrier FJ, Otto A, Becher D, Deghmane AE, Frosch M, Hellenbrand W, Hong E, Parent du Châtelet I, Prior K, Harmsen D, Vogel U, , Evolutionary Events Associated with an Outbreak of Meningococcal Disease in Men Who Have Sex with Men., PLoS One 2016 ; 11(5): e0154047.

Tsang TK, Fang VJ, Chan KH, Ip DK, Leung GM, Peiris JS, Cowling BJ, Cauchemez S, Individual Correlates of Infectivity of Influenza A Virus Infections in Households, PLoS ONE 2016;11(5):e0154418.

Grimaldi-Bensouda L, Abenhaim L, Massol J, Guillemot D, Avouac B, Duru G, Lert F, Magnier AM, Rossignol M, Rouillon F, Begaud B, , Homeopathic medical practice for anxiety and depression in primary care: the EPI3 cohort study, BMC Complement Altern Med 2016 May;16:125.

Marchionni E, Parize P, Lefevre A, Vironneau P, Bougnoux ME, Poiree S, Coignard-Biehler H, DeWolf SE, Amazzough K, Barchiesi F, Jullien V, Alanio A, Garcia-Hermoso D, Wassef M, Kania R, Lortholary O, Lanternier F, , Aspergillus spp. invasive external otitis: favourable outcome with a medical approach., Clin. Microbiol. Infect. 2016 May; 22(5): 434-7.

Khaled Alsaleh, Cécile Khou, Marie-Pascale Frenkiel, Sylvie Lecollinet, Ana Vàsquez, Eva Ramirez de Arellano, Philippe Desprès, Nathalie Pardigon, The E glycoprotein plays an essential role in the high pathogenicity of European-Mediterranean IS98 strain of West Nile virus., Virology. 2016 May;492:53-65. doi: 10.1016/j.virol.2016.02.009. Epub 2016 Feb 19..

Bonnaud EM, Suberbielle E, Malnou CE, Histone acetylation in neuronal (dys)function, Biomol Concepts 2016 May;7(2):103-16.

Morales I, Salje H, Saha S, Gurley ES, Seasonal Distribution and Climatic Correlates of Dengue Disease in Dhaka, Bangladesh, Am. J. Trop. Med. Hyg. 2016 Jun;94(6):1359-61.

Briand V, Saal J, Ghafari C, Huynh BT, Fievet N, Schmiegelow C, Massougbodji A, Deloron P, Zeitlin J, Cot M, Fetal Growth Restriction Is Associated With Malaria in Pregnancy: A Prospective Longitudinal Study in Benin, J. Infect. Dis. 2016 08;214(3):417-25.

Savers A, Rasid O, Parlato M, Brock M, Jouvion G, Ryffel B, Cavaillon JM, Eberl G, Ibrahim-Granet O, Infection-Mediated Priming of Phagocytes Protects against Lethal Secondary Aspergillus fumigatus Challenge, PLoS ONE 2016;11(4):e0153829.

Cao-Lormeau VM, Blake A, Mons S, Lastère S, Roche C, Vanhomwegen J, Dub T, Baudouin L, Teissier A, Larre P, Vial AL, Decam C, Choumet V, Halstead SK, Willison HJ, Musset L, Manuguerra JC, Despres P, Fournier E, Mallet HP, Musso D, Fontanet A, Neil J, Ghawché F, , Guillain-Barré Syndrome outbreak associated with Zika virus infection in French Polynesia: a case-control study., Lancet 2016 Apr; 387(10027): 1531-1539.

Bourhy H, Nakouné E, Hall M, Nouvellet P, Lepelletier A, Talbi C, Watier L, Holmes EC, Cauchemez S, Lemey P, Donnelly CA, Rambaut A, Revealing the Micro-scale Signature of Endemic Zoonotic Disease Transmission in an African Urban Setting, PLoS Pathog. 2016 Apr;12(4):e1005525.

Rodriguez-Barraquer I, Salje H, Cummings DA, Dengue Vaccine in Regions of Endemic Disease, N. Engl. J. Med. 2016 Apr;374(14):1388.

Lavergne A, Darcissac E, Bourhy H, Tirera S, de Thoisy B, Lacoste V, Complete Genome Sequence of a Vampire Bat Rabies Virus from French Guiana, Genome Announc 2016 Apr;4(2).

Hem S, Ly S, Votsi I, Vogt F, Asgari N, Buchy P, Heng S, Picardeau M, Sok T, Ly S, Huy R, Guillard B, Cauchemez S, Tarantola A, Estimating the Burden of Leptospirosis among Febrile Subjects Aged below 20 Years in Kampong Cham Communities, Cambodia, 2007-2009, PLoS ONE 2016;11(4):e0151555.

De Benedictis P, Minola A, Rota Nodari E, Aiello R, Zecchin B, Salomoni A, Foglierini M, Agatic G, Vanzetta F, Lavenir R, Lepelletier A, Bentley E, Weiss R, Cattoli G, Capua I, Sallusto F, Wright E, Lanzavecchia A, Bourhy H, Corti D, Development of broad-spectrum human monoclonal antibodies for rabies post-exposure prophylaxis, EMBO Mol Med 2016 04;8(4):407-21.

Skurnik D, Clermont O, Guillard T, Launay A, Danilchanka O, Pons S, Diancourt L, Lebreton F, Kadlec K, Roux D, Jiang D, Dion S, Aschard H, Denamur M, Cywes-Bentley C, Schwarz S, Tenaillon O, Andremont A, Picard B, Mekalanos J, Brisse S, Denamur E, , Emergence of Antimicrobial-Resistant Escherichia coli of Animal Origin Spreading in Humans., Mol Biol Evol 2016 Apr; 33(4): 898-914.

Agnememel A, Hong E, Giorgini D, Nuñez-Samudio V, Deghmane AE, Taha MK, Neisseria meningitidis Serogroup X in Sub-Saharan Africa, Emerging Infect. Dis. 2016 Apr;22(4):698-702.

Rodrigues C, Machado E, Fernandes S, Peixe L, Novais Â, , An update on faecal carriage of ESBL-producing Enterobacteriaceae by Portuguese healthy humans: detection of the H30 subclone of B2-ST131 Escherichia coli producing CTX-M-27., J Antimicrob Chemother 2016 Apr; 71(4): 1120-2.

Guimarães LC, Viana MV, Benevides LJ, Mariano DC, Veras AA, Sá PH, Rocha FS, Vilas Boas PC, Soares SC, Barbosa MS, Guiso N, Badell E, Carneiro AR, Azevedo V, Ramos RT, Silva A, Draft Genome Sequence of Toxigenic Corynebacterium ulcerans Strain 04-7514, Isolated from a Dog in France, Genome Announc 2016 Mar;4(2).

Guimarães LC, Viana MV, Benevides LJ, Mariano DC, Veras AA, Sá PH, Rocha FS, Vilas Boas PC, Soares SC, Barbosa MS, Guiso N, Badell E, Carneiro AR, Azevedo V, Ramos RT, Silva A, Draft Genome Sequence of Corynebacterium ulcerans Strain 04-3911, Isolated from Humans, Genome Announc 2016 Mar;4(2).

White MT, Shirreff G, Karl S, Ghani AC, Mueller I, Variation in relapse frequency and the transmission potential of Plasmodium vivax malaria., Proc Biol Sci 2016 Mar; 283(1827): 20160048.

Petit AC, Eutrope J, Thierry A, Bednarek N, Aupetit L, Saad S, Vulliez L, Sibertin-Blanc D, Nezelof S, Rolland AC, Mother’s Emotional and Posttraumatic Reactions after a Preterm Birth: The Mother-Infant Interaction Is at Stake 12 Months after Birth, PLoS ONE 2016;11(3):e0151091.

Freeman G, Perera RA, Ngan E, Fang VJ, Cauchemez S, Ip DK, Peiris JS, Cowling BJ, Quantifying homologous and heterologous antibody titre rises after influenza virus infection, Epidemiol. Infect. 2016 08;144(11):2306-16.

Njamkepo E, Fawal N, Tran-Dien A, Hawkey J, Strockbine N, Jenkins C, Talukder KA, Bercion R, Kuleshov K, Kolínská R, Russell JE, Kaftyreva L, Accou-Demartin M, Karas A, Vandenberg O, Mather AE, Mason CJ, Page AJ, Ramamurthy T, Bizet C, Gamian A, Carle I, Sow AG, Bouchier C, Wester AL, Lejay-Collin M, Fonkoua MC, Le Hello S, Blaser MJ, Jernberg C, Ruckly C, Mérens A, Page AL, Aslett M, Roggentin P, Fruth A, Denamur E, Venkatesan M, Bercovier H, Bodhidatta L, Chiou CS, Clermont D, Colonna B, Egorova S, Pazhani GP, Ezernitchi AV, Guigon G, Harris SR, Izumiya H, Korzeniowska-Kowal A, Lutyńska A, Gouali M, Grimont F, Langendorf C, Marejková M, Peterson LA, Perez-Perez G, Ngandjio A, Podkolzin A, Souche E, Makarova M, Shipulin GA, Ye C, Žemličková H, Herpay M, Grimont PA, Parkhill J, Sansonetti P, Holt KE, Brisse S, Thomson NR, Weill FX, , Global phylogeography and evolutionary history of Shigella dysenteriae type 1., Nat Microbiol 2016 03; 1(): 16027.

Lecocq H, Parent du Châtelet I, Taha MK, Lévy-Bruhl D, Dervaux B, , Epidemiological impact and cost-effectiveness of introducing vaccination against serogroup B meningococcal disease in France., Vaccine 2016 Apr; 34(19): 2240-50.

Duong V, Tarantola A, Ong S, Mey C, Choeung R, Ly S, Bourhy H, Dussart P, Buchy P, Laboratory diagnostics in dog-mediated rabies: an overview of performance and a proposed strategy for various settings, Int. J. Infect. Dis. 2016 May;46:107-14.

Cauchemez S, Besnard M, Bompard P, Dub T, Guillemette-Artur P, Eyrolle-Guignot D, Salje H, Van Kerkhove MD, Abadie V, Garel C, Fontanet A, Mallet HP, Association between Zika virus and microcephaly in French Polynesia, 2013-15: a retrospective study, Lancet 2016 May;387(10033):2125-2132.

Djossou F, Vesin G, Bidaud B, Mosnier E, Simonnet C, Matheus S, Prince C, Balcaen J, Donutil G, Egmann G, Okandze A, Malvy D, Nacher M, Incidence and Predictive Factors of Central Nervous System Dysfunction in Patients Consulting for Dengue Fever in Cayenne Hospital, French Guiana, PLoS ONE 2016;11(3):e0150828.

Cauchemez S, Besnard M, Bompard P, Dub T, Guillmette-Arthur P, Eyrolle-Guignot D, Salje H, Van Kerkhove MD, Abadie V, Garel C, Fontanet A, Mallet HP, Association between Zika virus and microcephaly in French Polynesia, 2013-2015: a retrospective study, The Lancet 2016; 387:2125-32..

Durand E, Watier L, Fix M, Weiss JJ, Chevignard M, Pradat-Diehl P, Prevalence of traumatic brain injury and epilepsy among prisoners in France: Results of the Fleury TBI study, Brain Inj 2016;30(4):363-372.

Derkaoui M, Antunes A, Poncet S, Nait Abdallah J, Joyet P, Mazé A, Henry C, Taha MK, Deutscher J, Deghmane AE, , The phosphocarrier protein HPr of Neisseria meningitidis interacts with the transcription regulator CrgA and its deletion affects capsule production, cell adhesion, and virulence., Mol Microbiol 2016 06; 100(5): 788-807.

Leekitcharoenphon P, Hendriksen RS, Le Hello S, Weill FX, Baggesen DL, Jun SR, Ussery DW, Lund O, Crook DW, Wilson DJ, Aarestrup FM, Global genomic epidemiology of Salmonella Typhimurium DT104, Appl. Environ. Microbiol. 2016 Mar;.

Botelho-Nevers E, Gagneux-Brunon A, Cantais A, Daoud F, Fouilloux P, Fresard A, Cazorla C, Witz M, Monnier G, Guerson N, Ragozin N, Parize P, Bourhy H, Dacheux L, Pihier N, Septfons A, Guichard M, Lucht F, The potential lethal consequences of rabies vaccine avoidance and dog smuggling in Europe, J. Infect. 2016 May;72(5):626-8.

Cao-Lormeau VM, Blake A, Mons S, Lastère S, Roche C, Vanhomwegen J, Dub T, Baudouin L, Teissier A, Larre P, Vial AL, Decam C, Choumet V, Halstead SK, Willison HJ, Musset L, Manuguerra JC, Despres P, Fournier E, Mallet HP, Musso D, Fontanet A, Neil J, Ghawché F, Guillain-Barré Syndrome outbreak associated with Zika virus infection in French Polynesia: a case-control study, Lancet 2016 Apr;387(10027):1531-9.

Guimarães LC, Lopes T, Ramos RT, Carneiro AR, Cavalcante AL, Barreto D, de Sá PC, Veras AA, Rocha FS, Bagano P, Pereira FL, Dorella FA, Leal CA, Carvalho AF, Bizet C, Guiso N, Badell E, Figueiredo HC, Azevedo V, Silva A, Draft Genome Sequences of Two Pathogenic Corynebacterial Species Isolated from Cows, J Genomics 2016;4:7-9.

Maury MM, Tsai YH, Charlier C, Touchon M, Chenal-Francisque V, Leclercq A, Criscuolo A, Gaultier C, Roussel S, Brisabois A, Disson O, Rocha EPC, Brisse S, Lecuit M, , Uncovering Listeria monocytogenes hypervirulence by harnessing its biodiversity., Nat Genet 2016 Mar; 48(3): 308-313.

Breurec S, Melot B, Hoen B, Passet V, Schepers K, Bastian S, Brisse S, Liver Abscess Caused by Infection with Community-Acquired Klebsiella quasipneumoniae subsp. quasipneumoniae, Emerging Infect. Dis. 2016 Mar;22(3):529-31.

Lemoine M, Thursz M, Mallet V, Shimakawa Y, , Diagnostic accuracy of the gamma-glutamyl transpeptidase to platelet ratio (GPR) using transient elastography as a reference., Gut 2017 Jan; 66(1): 195-196.

Mostafa A, Shimakawa Y, Medhat A, Mikhail NN, Chesnais CB, Arafa N, Bakr I, El Hoseiny M, El-Daly M, Esmat G, Abdel-Hamid M, Mohamed MK, Fontanet A, , Excess mortality rate associated with hepatitis C virus infection: A community-based cohort study in rural Egypt., J Hepatol 2016 Jun; 64(6): 1240-6.

Tarantola A, Crabol Y, Mahendra BJ, In S, Barennes H, Bourhy H, Peng Y, Ly S, Buchy P, Caring for patients with rabies in developing countries – the neglected importance of palliative care, Trop. Med. Int. Health 2016 Apr;21(4):564-7.

Glaser P, Martins-Simões P, Villain A, Barbier M, Tristan A, Bouchier C, Ma L, Bes M, Laurent F, Guillemot D, Wirth T, Vandenesch F, Demography and Intercontinental Spread of the USA300 Community-Acquired Methicillin-Resistant Staphylococcus aureus Lineage, MBio 2016 Feb;7(1):e02183-15.

Makendi C, Page AJ, Wren BW, Le Thi Phuong T, Clare S, Hale C, Goulding D, Klemm EJ, Pickard D, Okoro C, Hunt M, Thompson CN, Phu Huong Lan N, Tran Do Hoang N, Thwaites GE, Le Hello S, Brisabois A, Weill FX, Baker S, Dougan G, A Phylogenetic and Phenotypic Analysis of Salmonella enterica Serovar Weltevreden, an Emerging Agent of Diarrheal Disease in Tropical Regions, PLoS Negl Trop Dis 2016 Feb;10(2):e0004446.

Huynh BT, Padget M, Garin B, Delarocque-Astagneau E, Guillemot D, , Bacterial neonatal sepsis and antibiotic resistance in low-income countries, Lancet 2016 Feb;387(10018):533-534.

Fiole D, Tournier JN, Intravital microscopy of the lung: minimizing invasiveness, J Biophotonics 2016 Feb;.

Lessler J, Salje H, Van Kerkhove MD, Ferguson NM, Cauchemez S, Rodriquez-Barraquer I, Hakeem R, Jombart T, Aguas R, Al-Barrak A, Cummings DA, , Estimating the Severity and Subclinical Burden of Middle East Respiratory Syndrome Coronavirus Infection in the Kingdom of Saudi Arabia, Am. J. Epidemiol. 2016 Apr;183(7):657-63.

Hassen WB, Tisserand M, Turc G, Charron S, Seners P, Edjlali M, Legrand L, Lion S, Calvet D, Naggara O, Mas JL, Meder JF, Baron JC, Oppenheim C, Comparison between voxel-based and subtraction methods for measuring diffusion-weighted imaging lesion growth after thrombolysis, Int J Stroke 2016 Feb;11(2):221-8.

Mendes AC, Rodrigues C, Pires J, Amorim J, Ramos MH, Novais Â, Peixe L, , Importation of Fosfomycin Resistance fosA3 Gene to Europe., Emerg Infect Dis 2016 Feb; 22(2): 346-8.

Shimakawa T, Shimakawa Y, Kawasoe Y, Yoshimura K, Chinen Y, Eimon K, Chibana W, Shirota S, Kadekawa K, Bahr R, Uezato T, Ikeda H, , Beach Soccer Injuries During the Japanese National Championships., Orthop J Sports Med 2016 Jan; 4(1): 2325967115625636.

Georgin-Lavialle S, Moura DS, Salvador A, Chauvet-Gelinier JC, Launay JM, Damaj G, Côté F, Soucié E, Chandesris MO, Barète S, Grandpeix-Guyodo C, Bachmeyer C, Alyanakian MA, Aouba A, Lortholary O, Dubreuil P, Teyssier JR, Trojak B, Haffen E, Vandel P, Bonin B, , Hermine O, Gaillard R, Mast cells’ involvement in inflammation pathways linked to depression: evidence in mastocytosis, Mol. Psychiatry 2016 Jan;.

Hardy D, Besnard A, Latil M, Jouvion G, Briand D, Thépenier C, Pascal Q, Guguin A, Gayraud-Morel B, Cavaillon JM, Tajbakhsh S, Rocheteau P, Chrétien F, Comparative Study of Injury Models for Studying Muscle Regeneration in Mice, PLoS ONE 2016;11(1):e0147198.

de Thoisy B, Bourhy H, Delaval M, Pontier D, Dacheux L, Darcissac E, Donato D, Guidez A, Larrous F, Lavenir R, Salmier A, Lacoste V, Lavergne A, Bioecological Drivers of Rabies Virus Circulation in a Neotropical Bat Community, PLoS Negl Trop Dis 2016 Jan;10(1):e0004378.

Stapleford KA, Moratorio G, Henningsson R, Chen R, Matheus S, Enfissi A, Weissglas-Volkov D, Isakov O, Blanc H, Mounce BC, Dupont-Rouzeyrol M, Shomron N, Weaver S, Fontes M, Rousset D, Vignuzzi M, Whole-Genome Sequencing Analysis from the Chikungunya Virus Caribbean Outbreak Reveals Novel Evolutionary Genomic Elements, PLoS Negl Trop Dis 2016 Jan;10(1):e0004402.

Hardy D 1, 2 , Besnard A 1 , Latil M 1 , Jouvion G 1, 3 , Briand D 1 , Thépenier C 1, 4 , Pascal Q 1 , Guguin A 5 , Gayraud-Morel B 6 , Cavaillon JM 7 , Tajbakhsh S 6 , Rocheteau P 1 , Chrétien F 1, 3, 8 ., Comparative Study of Injury Models for Studying Muscle Regeneration in Mice, PLoS One. 25 janvier 2016; 11 (1): e0147198. doi: 10.1371 / journal.pone.0147198. eCollection 2016..

Fumanelli L, Ajelli M, Merler S, Ferguson NM, Cauchemez S, Model-Based Comprehensive Analysis of School Closure Policies for Mitigating Influenza Epidemics and Pandemics, PLoS Comput. Biol. 2016 Jan;12(1):e1004681.

Gauthier C, Doyen C, Amado I, Lôo H, Gaillard R, [Therapeutic effects of oxytocin in autism: Current status of the research], Encephale 2016 Feb;42(1):24-31.

Domenech de Cellès M, Magpantay FM, King AA, Rohani P, The pertussis enigma: reconciling epidemiology, immunology and evolution, Proc. Biol. Sci. 2016 Jan;283(1822).

Masson M, Gaillard R, Olié JP, Lôo H, [L’Encéphale 1906-2016…Much more than an anniversary: An editorial renewal], Encephale 2016 Feb;42(1):1-3.

Biacchesi S, Jouvion G, Mérour E, Boukadiri A, Desdouits M, Ozden S, Huerre M, Ceccaldi PE, Brémont M, Rainbow trout (Oncorhynchus mykiss) muscle satellite cells are targets of salmonid alphavirus infection, Vet. Res. 2016;47(1):9.

Leroy O, Bailly S, Gangneux JP, Mira JP, Devos P, Dupont H, Montravers P, Perrigault PF, Constantin JM, Guillemot D, Azoulay E, Lortholary O, Bensoussan C, Timsit JF, , Systemic antifungal therapy for proven or suspected invasive candidiasis: the AmarCAND 2 study, Ann Intensive Care 2016 Dec;6(1):2.

Breurec S, Vanel N, Bata P, Chartier L, Farra A, Favennec L, Franck T, Giles-Vernick T, Gody JC, Luong Nguyen LB, Onambélé M, Rafaï C, Razakandrainibe R, Tondeur L, Tricou V, Sansonetti P, Vray M, Etiology and Epidemiology of Diarrhea in Hospitalized Children from Low Income Country: A Matched Case-Control Study in Central African Republic, PLoS Negl Trop Dis 2016 Jan;10(1):e0004283.

Qesseveur G, Petit AC, Nguyen HT, Dahan L, Colle R, Rotenberg S, Seif I, Robert P, David D, Guilloux JP, Gardier AM, Verstuyft C, Becquemont L, Corruble E, Guiard BP, Genetic dysfunction of serotonin 2A receptor hampers response to antidepressant drugs: A translational approach, Neuropharmacology 2016 06;105:142-153.

Shimakawa Y, Toure-Kane C, Mendy M, Thursz M, Lemoine M, , Mother-to-child transmission of hepatitis B in sub-Saharan Africa., Lancet Infect Dis 2016 Jan; 16(1): 19-20.

Commereuc M, Weill FX, Loukiadis E, Gouali M, Gleizal A, Kormann R, Ridel C, Frémeaux-Bacchi V, Rondeau E, Hertig A, Recurrent Hemolytic and Uremic Syndrome Induced by Escherichia Coli, Medicine (Baltimore) 2016 Jan;95(1):e2050.

Klionsky DJ, Abdelmohsen K, Abe A, Abedin MJ, Abeliovich H, Acevedo Arozena A, Adachi H, Adams CM, Adams PD, Adeli K, Adhihetty PJ, Adler SG, Agam G, Agarwal R, Aghi MK, Agnello M, Agostinis P, Aguilar PV, Aguirre-Ghiso J, Airoldi EM, Ait-Si-Ali S, Akematsu T, Akporiaye ET, Al-Rubeai M, Albaiceta GM, Albanese C, Albani D, Albert ML, Aldudo J, Algül H, Alirezaei M, Alloza I, Almasan A, Almonte-Beceril M, Alnemri ES, Alonso C, Altan-Bonnet N, Altieri DC, Alvarez S, Alvarez-Erviti L, Alves S, Amadoro G, Amano A, Amantini C, Ambrosio S, Amelio I, Amer AO, Amessou M, Amon A, An Z, Anania FA, Andersen SU, Andley UP, Andreadi CK, Andrieu-Abadie N, Anel A, Ann DK, Anoopkumar-Dukie S, Antonioli M, Aoki H, Apostolova N, Aquila S, Aquilano K, Araki K, Arama E, Aranda A, Araya J, Arcaro A, Arias E, Arimoto H, Ariosa AR, Armstrong JL, Arnould T, Arsov I, Asanuma K, Askanas V, Asselin E, Atarashi R, Atherton SS, Atkin JD, Attardi LD, Auberger P, Auburger G, Aurelian L, Autelli R, Avagliano L, Avantaggiati ML, Avrahami L, Awale S, Azad N, Bachetti T, Backer JM, Bae DH, Bae JS, Bae ON, Bae SH, Baehrecke EH, Baek SH, Baghdiguian S, Bagniewska-Zadworna A, Bai H, Bai J, Bai XY, Bailly Y, Balaji KN, Balduini W, Ballabio A, Balzan R, Banerjee R, Bánhegyi G, Bao H, Barbeau B, Barrachina MD, Barreiro E, Bartel B, Bartolomé A, Bassham DC, Bassi MT, Bast RC, Basu A, Batista MT, Batoko H, Battino M, Bauckman K, Baumgarner BL, Bayer KU, Beale R, Beaulieu JF, Beck GR, Becker C, Beckham JD, Bédard PA, Bednarski PJ, Begley TJ, Behl C, Behrends C, Behrens GM, Behrns KE, Bejarano E, Belaid A, Belleudi F, Bénard G, Berchem G, Bergamaschi D, Bergami M, Berkhout B, Berliocchi L, Bernard A, Bernard M, Bernassola F, Bertolotti A, Bess AS, Besteiro S, Bettuzzi S, Bhalla S, Bhattacharyya S, Bhutia SK, Biagosch C, Bianchi MW, Biard-Piechaczyk M, Billes V, Bincoletto C, Bingol B, Bird SW, Bitoun M, Bjedov I, Blackstone C, Blanc L, Blanco GA, Blomhoff HK, Boada-Romero E, Böckler S, Boes M, Boesze-Battaglia K, Boise LH, Bolino A, Boman A, Bonaldo P, Bordi M, Bosch J, Botana LM, Botti J, Bou G, Bouché M, Bouchecareilh M, Boucher MJ, Boulton ME, Bouret SG, Boya P, Boyer-Guittaut M, Bozhkov PV, Brady N, Braga VM, Brancolini C, Braus GH, Bravo-San Pedro JM, Brennan LA, Bresnick EH, Brest P, Bridges D, Bringer MA, Brini M, Brito GC, Brodin B, Brookes PS, Brown EJ, Brown K, Broxmeyer HE, Bruhat A, Brum PC, Brumell JH, Brunetti-Pierri N, Bryson-Richardson RJ, Buch S, Buchan AM, Budak H, Bulavin DV, Bultman SJ, Bultynck G, Bumbasirevic V, Burelle Y, Burke RE, Burmeister M, Bütikofer P, Caberlotto L, Cadwell K, Cahova M, Cai D, Cai J, Cai Q, Calatayud S, Camougrand N, Campanella M, Campbell GR, Campbell M, Campello S, Candau R, Caniggia I, Cantoni L, Cao L, Caplan AB, Caraglia M, Cardinali C, Cardoso SM, Carew JS, Carleton LA, Carlin CR, Carloni S, Carlsson SR, Carmona-Gutierrez D, Carneiro LA, Carnevali O, Carra S, Carrier A, Carroll B, Casas C, Casas J, Cassinelli G, Castets P, Castro-Obregon S, Cavallini G, Ceccherini I, Cecconi F, Cederbaum AI, Ceña V, Cenci S, Cerella C, Cervia D, Cetrullo S, Chaachouay H, Chae HJ, Chagin AS, Chai CY, Chakrabarti G, Chamilos G, Chan EY, Chan MT, Chandra D, Chandra P, Chang CP, Chang RC, Chang TY, Chatham JC, Chatterjee S, Chauhan S, Che Y, Cheetham ME, Cheluvappa R, Chen CJ, Chen G, Chen GC, Chen G, Chen H, Chen JW, Chen JK, Chen M, Chen M, Chen P, Chen Q, Chen Q, Chen SD, Chen S, Chen SS, Chen W, Chen WJ, Chen WQ, Chen W, Chen X, Chen YH, Chen YG, Chen Y, Chen Y, Chen Y, Chen YJ, Chen YQ, Chen Y, Chen Z, Chen Z, Cheng A, Cheng CH, Cheng H, Cheong H, Cherry S, Chesney J, Cheung CH, Chevet E, Chi HC, Chi SG, Chiacchiera F, Chiang HL, Chiarelli R, Chiariello M, Chieppa M, Chin LS, Chiong M, Chiu GN, Cho DH, Cho SG, Cho WC, Cho YY, Cho YS, Choi AM, Choi EJ, Choi EK, Choi J, Choi ME, Choi SI, Chou TF, Chouaib S, Choubey D, Choubey V, Chow KC, Chowdhury K, Chu CT, Chuang TH, Chun T, Chung H, Chung T, Chung YL, Chwae YJ, Cianfanelli V, Ciarcia R, Ciechomska IA, Ciriolo MR, Cirone M, Claerhout S, Clague MJ, Clària J, Clarke PG, Clarke R, Clementi E, Cleyrat C, Cnop M, Coccia EM, Cocco T, Codogno P, Coers J, Cohen EE, Colecchia D, Coletto L, Coll NS, Colucci-Guyon E, Comincini S, Condello M, Cook KL, Coombs GH, Cooper CD, Cooper JM, Coppens I, Corasaniti MT, Corazzari M, Corbalan R, Corcelle-Termeau E, Cordero MD, Corral-Ramos C, Corti O, Cossarizza A, Costelli P, Costes S, Cotman SL, Coto-Montes A, Cottet S, Couve E, Covey LR, Cowart LA, Cox JS, Coxon FP, Coyne CB, Cragg MS, Craven RJ, Crepaldi T, Crespo JL, Criollo A, Crippa V, Cruz MT, Cuervo AM, Cuezva JM, Cui T, Cutillas PR, Czaja MJ, Czyzyk-Krzeska MF, Dagda RK, Dahmen U, Dai C, Dai W, Dai Y, Dalby KN, Dalla Valle L, Dalmasso G, D'Amelio M, Damme M, Darfeuille-Michaud A, Dargemont C, Darley-Usmar VM, Dasarathy S, Dasgupta B, Dash S, Dass CR, Davey HM, Davids LM, Dávila D, Davis RJ, Dawson TM, Dawson VL, Daza P, de Belleroche J, de Figueiredo P, de Figueiredo RC, de la Fuente J, De Martino L, De Matteis A, De Meyer GR, De Milito A, De Santi M, de Souza W, De Tata V, De Zio D, Debnath J, Dechant R, Decuypere JP, Deegan S, Dehay B, Del Bello B, Del Re DP, Delage-Mourroux R, Delbridge LM, Deldicque L, Delorme-Axford E, Deng Y, Dengjel J, Denizot M, Dent P, Der CJ, Deretic V, Derrien B, Deutsch E, Devarenne TP, Devenish RJ, Di Bartolomeo S, Di Daniele N, Di Domenico F, Di Nardo A, Di Paola S, Di Pietro A, Di Renzo L, DiAntonio A, Díaz-Araya G, Díaz-Laviada I, Diaz-Meco MT, Diaz-Nido J, Dickey CA, Dickson RC, Diederich M, Digard P, Dikic I, Dinesh-Kumar SP, Ding C, Ding WX, Ding Z, Dini L, Distler JH, Diwan A, Djavaheri-Mergny M, Dmytruk K, Dobson RC, Doetsch V, Dokladny K, Dokudovskaya S, Donadelli M, Dong XC, Dong X, Dong Z, Donohue TM, Doran KS, D'Orazi G, Dorn GW, Dosenko V, Dridi S, Drucker L, Du J, Du LL, Du L, du Toit A, Dua P, Duan L, Duann P, Dubey VK, Duchen MR, Duchosal MA, Duez H, Dugail I, Dumit VI, Duncan MC, Dunlop EA, Dunn WA, Dupont N, Dupuis L, Durán RV, Durcan TM, Duvezin-Caubet S, Duvvuri U, Eapen V, Ebrahimi-Fakhari D, Echard A, Eckhart L, Edelstein CL, Edinger AL, Eichinger L, Eisenberg T, Eisenberg-Lerner A, Eissa NT, El-Deiry WS, El-Khoury V, Elazar Z, Eldar-Finkelman H, Elliott CJ, Emanuele E, Emmenegger U, Engedal N, Engelbrecht AM, Engelender S, Enserink JM, Erdmann R, Erenpreisa J, Eri R, Eriksen JL, Erman A, Escalante R, Eskelinen EL, Espert L, Esteban-Martínez L, Evans TJ, Fabri M, Fabrias G, Fabrizi C, Facchiano A, Færgeman NJ, Faggioni A, Fairlie WD, Fan C, Fan D, Fan J, Fang S, Fanto M, Fanzani A, Farkas T, Faure M, Favier FB, Fearnhead H, Federici M, Fei E, Felizardo TC, Feng H, Feng Y, Feng Y, Ferguson TA, Fernández ÁF, Fernandez-Barrena MG, Fernandez-Checa JC, Fernández-López A, Fernandez-Zapico ME, Feron O, Ferraro E, Ferreira-Halder CV, Fesus L, Feuer R, Fiesel FC, Filippi-Chiela EC, Filomeni G, Fimia GM, Fingert JH, Finkbeiner S, Finkel T, Fiorito F, Fisher PB, Flajolet M, Flamigni F, Florey O, Florio S, Floto RA, Folini M, Follo C, Fon EA, Fornai F, Fortunato F, Fraldi A, Franco R, Francois A, François A, Frankel LB, Fraser ID, Frey N, Freyssenet DG, Frezza C, Friedman SL, Frigo DE, Fu D, Fuentes JM, Fueyo J, Fujitani Y, Fujiwara Y, Fujiya M, Fukuda M, Fulda S, Fusco C, Gabryel B, Gaestel M, Gailly P, Gajewska M, Galadari S, Galili G, Galindo I, Galindo MF, Galliciotti G, Galluzzi L, Galluzzi L, Galy V, Gammoh N, Gandy S, Ganesan AK, Ganesan S, Ganley IG, Gannagé M, Gao FB, Gao F, Gao JX, García Nannig L, García Véscovi E, Garcia-Macía M, Garcia-Ruiz C, Garg AD, Garg PK, Gargini R, Gassen NC, Gatica D, Gatti E, Gavard J, Gavathiotis E, Ge L, Ge P, Ge S, Gean PW, Gelmetti V, Genazzani AA, Geng J, Genschik P, Gerner L, Gestwicki JE, Gewirtz DA, Ghavami S, Ghigo E, Ghosh D, Giammarioli AM, Giampieri F, Giampietri C, Giatromanolaki A, Gibbings DJ, Gibellini L, Gibson SB, Ginet V, Giordano A, Giorgini F, Giovannetti E, Girardin SE, Gispert S, Giuliano S, Gladson CL, Glavic A, Gleave M, Godefroy N, Gogal RM, Gokulan K, Goldman GH, Goletti D, Goligorsky MS, Gomes AV, Gomes LC, Gomez H, Gomez-Manzano C, Gómez-Sánchez R, Gonçalves DA, Goncu E, Gong Q, Gongora C, Gonzalez CB, Gonzalez-Alegre P, Gonzalez-Cabo P, González-Polo RA, Goping IS, Gorbea C, Gorbunov NV, Goring DR, Gorman AM, Gorski SM, Goruppi S, Goto-Yamada S, Gotor C, Gottlieb RA, Gozes I, Gozuacik D, Graba Y, Graef M, Granato GE, Grant GD, Grant S, Gravina GL, Green DR, Greenhough A, Greenwood MT, Grimaldi B, Gros F, Grose C, Groulx JF, Gruber F, Grumati P, Grune T, Guan JL, Guan KL, Guerra B, Guillen C, Gulshan K, Gunst J, Guo C, Guo L, Guo M, Guo W, Guo XG, Gust AA, Gustafsson ÅB, Gutierrez E, Gutierrez MG, Gwak HS, Haas A, Haber JE, Hadano S, Hagedorn M, Hahn DR, Halayko AJ, Hamacher-Brady A, Hamada K, Hamai A, Hamann A, Hamasaki M, Hamer I, Hamid Q, Hammond EM, Han F, Han W, Handa JT, Hanover JA, Hansen M, Harada M, Harhaji-Trajkovic L, Harper JW, Harrath AH, Harris AL, Harris J, Hasler U, Hasselblatt P, Hasui K, Hawley RG, Hawley TS, He C, He CY, He F, He G, He RR, He XH, He YW, He YY, Heath JK, Hébert MJ, Heinzen RA, Helgason GV, Hensel M, Henske EP, Her C, Herman PK, Hernández A, Hernandez C, Hernández-Tiedra S, Hetz C, Hiesinger PR, Higaki K, Hilfiker S, Hill BG, Hill JA, Hill WD, Hino K, Hofius D, Hofman P, Höglinger GU, Höhfeld J, Holz MK, Hong Y, Hood DA, Hoozemans JJ, Hoppe T, Hsu C, Hsu CY, Hsu LC, Hu D, Hu G, Hu HM, Hu H, Hu MC, Hu YC, Hu ZW, Hua F, Hua Y, Huang C, Huang HL, Huang KH, Huang KY, Huang S, Huang S, Huang WP, Huang YR, Huang Y, Huang Y, Huber TB, Huebbe P, Huh WK, Hulmi JJ, Hur GM, Hurley JH, Husak Z, Hussain SN, Hussain S, Hwang JJ, Hwang S, Hwang TI, Ichihara A, Imai Y, Imbriano C, Inomata M, Into T, Iovane V, Iovanna JL, Iozzo RV, Ip NY, Irazoqui JE, Iribarren P, Isaka Y, Isakovic AJ, Ischiropoulos H, Isenberg JS, Ishaq M, Ishida H, Ishii I, Ishmael JE, Isidoro C, Isobe K, Isono E, Issazadeh-Navikas S, Itahana K, Itakura E, Ivanov AI, Iyer AK, Izquierdo JM, Izumi Y, Izzo V, Jäättelä M, Jaber N, Jackson DJ, Jackson WT, Jacob TG, Jacques TS, Jagannath C, Jain A, Jana NR, Jang BK, Jani A, Janji B, Jannig PR, Jansson PJ, Jean S, Jendrach M, Jeon JH, Jessen N, Jeung EB, Jia K, Jia L, Jiang H, Jiang H, Jiang L, Jiang T, Jiang X, Jiang X, Jiang X, Jiang Y, Jiang Y, Jiménez A, Jin C, Jin H, Jin L, Jin M, Jin S, Jinwal UK, Jo EK, Johansen T, Johnson DE, Johnson GV, Johnson JD, Jonasch E, Jones C, Joosten LA, Jordan J, Joseph AM, Joseph B, Joubert AM, Ju D, Ju J, Juan HF, Juenemann K, Juhász G, Jung HS, Jung JU, Jung YK, Jungbluth H, Justice MJ, Jutten B, Kaakoush NO, Kaarniranta K, Kaasik A, Kabuta T, Kaeffer B, Kågedal K, Kahana A, Kajimura S, Kakhlon O, Kalia M, Kalvakolanu DV, Kamada Y, Kambas K, Kaminskyy VO, Kampinga HH, Kandouz M, Kang C, Kang R, Kang TC, Kanki T, Kanneganti TD, Kanno H, Kanthasamy AG, Kantorow M, Kaparakis-Liaskos M, Kapuy O, Karantza V, Karim MR, Karmakar P, Kaser A, Kaushik S, Kawula T, Kaynar AM, Ke PY, Ke ZJ, Kehrl JH, Keller KE, Kemper JK, Kenworthy AK, Kepp O, Kern A, Kesari S, Kessel D, Ketteler R, Kettelhut Ido C, Khambu B, Khan MM, Khandelwal VK, Khare S, Kiang JG, Kiger AA, Kihara A, Kim AL, Kim CH, Kim DR, Kim DH, Kim EK, Kim HY, Kim HR, Kim JS, Kim JH, Kim JC, Kim JH, Kim KW, Kim MD, Kim MM, Kim PK, Kim SW, Kim SY, Kim YS, Kim Y, Kimchi A, Kimmelman AC, Kimura T, King JS, Kirkegaard K, Kirkin V, Kirshenbaum LA, Kishi S, Kitajima Y, Kitamoto K, Kitaoka Y, Kitazato K, Kley RA, Klimecki WT, Klinkenberg M, Klucken J, Knævelsrud H, Knecht E, Knuppertz L, Ko JL, Kobayashi S, Koch JC, Koechlin-Ramonatxo C, Koenig U, Koh YH, Köhler K, Kohlwein SD, Koike M, Komatsu M, Kominami E, Kong D, Kong HJ, Konstantakou EG, Kopp BT, Korcsmaros T, Korhonen L, Korolchuk VI, Koshkina NV, Kou Y, Koukourakis MI, Koumenis C, Kovács AL, Kovács T, Kovacs WJ, Koya D, Kraft C, Krainc D, Kramer H, Kravic-Stevovic T, Krek W, Kretz-Remy C, Krick R, Krishnamurthy M, Kriston-Vizi J, Kroemer G, Kruer MC, Kruger R, Ktistakis NT, Kuchitsu K, Kuhn C, Kumar AP, Kumar A, Kumar A, Kumar D, Kumar D, Kumar R, Kumar S, Kundu M, Kung HJ, Kuno A, Kuo SH, Kuret J, Kurz T, Kwok T, Kwon TK, Kwon YT, Kyrmizi I, La Spada AR, Lafont F, Lahm T, Lakkaraju A, Lam T, Lamark T, Lancel S, Landowski TH, Lane DJ, Lane JD, Lanzi C, Lapaquette P, Lapierre LR, Laporte J, Laukkarinen J, Laurie GW, Lavandero S, Lavie L, LaVoie MJ, Law BY, Law HK, Law KB, Layfield R, Lazo PA, Le Cam L, Le Roch KG, Le Stunff H, Leardkamolkarn V, Lecuit M, Lee BH, Lee CH, Lee EF, Lee GM, Lee HJ, Lee H, Lee JK, Lee J, Lee JH, Lee JH, Lee M, Lee MS, Lee PJ, Lee SW, Lee SJ, Lee SJ, Lee SY, Lee SH, Lee SS, Lee SJ, Lee S, Lee YR, Lee YJ, Lee YH, Leeuwenburgh C, Lefort S, Legouis R, Lei J, Lei QY, Leib DA, Leibowitz G, Lekli I, Lemaire SD, Lemasters JJ, Lemberg MK, Lemoine A, Leng S, Lenz G, Lenzi P, Lerman LO, Lettieri Barbato D, Leu JI, Leung HY, Levine B, Lewis PA, Lezoualc'h F, Li C, Li F, Li FJ, Li J, Li K, Li L, Li M, Li M, Li Q, Li R, Li S, Li W, Li W, Li X, Li Y, Lian J, Liang C, Liang Q, Liao Y, Liberal J, Liberski PP, Lie P, Lieberman AP, Lim HJ, Lim KL, Lim K, Lima RT, Lin CS, Lin CF, Lin F, Lin F, Lin FC, Lin K, Lin KH, Lin PH, Lin T, Lin WW, Lin YS, Lin Y, Linden R, Lindholm D, Lindqvist LM, Lingor P, Linkermann A, Liotta LA, Lipinski MM, Lira VA, Lisanti MP, Liton PB, Liu B, Liu C, Liu CF, Liu F, Liu HJ, Liu J, Liu JJ, Liu JL, Liu K, Liu L, Liu L, Liu Q, Liu RY, Liu S, Liu S, Liu W, Liu XD, Liu X, Liu XH, Liu X, Liu X, Liu X, Liu Y, Liu Y, Liu Z, Liu Z, Liuzzi JP, Lizard G, Ljujic M, Lodhi IJ, Logue SE, Lokeshwar BL, Long YC, Lonial S, Loos B, López-Otín C, López-Vicario C, Lorente M, Lorenzi PL, Lõrincz P, Los M, Lotze MT, Lovat PE, Lu B, Lu B, Lu J, Lu Q, Lu SM, Lu S, Lu Y, Luciano F, Luckhart S, Lucocq JM, Ludovico P, Lugea A, Lukacs NW, Lum JJ, Lund AH, Luo H, Luo J, Luo S, Luparello C, Lyons T, Ma J, Ma Y, Ma Y, Ma Z, Machado J, Machado-Santelli GM, Macian F, MacIntosh GC, MacKeigan JP, Macleod KF, MacMicking JD, MacMillan-Crow LA, Madeo F, Madesh M, Madrigal-Matute J, Maeda A, Maeda T, Maegawa G, Maellaro E, Maes H, Magariños M, Maiese K, Maiti TK, Maiuri L, Maiuri MC, Maki CG, Malli R, Malorni W, Maloyan A, Mami-Chouaib F, Man N, Mancias JD, Mandelkow EM, Mandell MA, Manfredi AA, Manié SN, Manzoni C, Mao K, Mao Z, Mao ZW, Marambaud P, Marconi AM, Marelja Z, Marfe G, Margeta M, Margittai E, Mari M, Mariani FV, Marin C, Marinelli S, Mariño G, Markovic I, Marquez R, Martelli AM, Martens S, Martin KR, Martin SJ, Martin S, Martin-Acebes MA, Martín-Sanz P, Martinand-Mari C, Martinet W, Martinez J, Martinez-Lopez N, Martinez-Outschoorn U, Martínez-Velázquez M, Martinez-Vicente M, Martins WK, Mashima H, Mastrianni JA, Matarese G, Matarrese P, Mateo R, Matoba S, Matsumoto N, Matsushita T, Matsuura A, Matsuzawa T, Mattson MP, Matus S, Maugeri N, Mauvezin C, Mayer A, Maysinger D, Mazzolini GD, McBrayer MK, McCall K, McCormick C, McInerney GM, McIver SC, McKenna S, McMahon JJ, McNeish IA, Mechta-Grigoriou F, Medema JP, Medina DL, Megyeri K, Mehrpour M, Mehta JL, Mei Y, Meier UC, Meijer AJ, Meléndez A, Melino G, Melino S, de Melo EJ, Mena MA, Meneghini MD, Menendez JA, Menezes R, Meng L, Meng LH, Meng S, Menghini R, Menko AS, Menna-Barreto RF, Menon MB, Meraz-Ríos MA, Merla G, Merlini L, Merlot AM, Meryk A, Meschini S, Meyer JN, Mi MT, Miao CY, Micale L, Michaeli S, Michiels C, Migliaccio AR, Mihailidou AS, Mijaljica D, Mikoshiba K, Milan E, Miller-Fleming L, Mills GB, Mills IG, Minakaki G, Minassian BA, Ming XF, Minibayeva F, Minina EA, Mintern JD, Minucci S, Miranda-Vizuete A, Mitchell CH, Miyamoto S, Miyazawa K, Mizushima N, Mnich K, Mograbi B, Mohseni S, Moita LF, Molinari M, Molinari M, Møller AB, Mollereau B, Mollinedo F, Mongillo M, Monick MM, Montagnaro S, Montell C, Moore DJ, Moore MN, Mora-Rodriguez R, Moreira PI, Morel E, Morelli MB, Moreno S, Morgan MJ, Moris A, Moriyasu Y, Morrison JL, Morrison LA, Morselli E, Moscat J, Moseley PL, Mostowy S, Motori E, Mottet D, Mottram JC, Moussa CE, Mpakou VE, Mukhtar H, Mulcahy Levy JM, Muller S, Muñoz-Moreno R, Muñoz-Pinedo C, Münz C, Murphy ME, Murray JT, Murthy A, Mysorekar IU, Nabi IR, Nabissi M, Nader GA, Nagahara Y, Nagai Y, Nagata K, Nagelkerke A, Nagy P, Naidu SR, Nair S, Nakano H, Nakatogawa H, Nanjundan M, Napolitano G, Naqvi NI, Nardacci R, Narendra DP, Narita M, Nascimbeni AC, Natarajan R, Navegantes LC, Nawrocki ST, Nazarko TY, Nazarko VY, Neill T, Neri LM, Netea MG, Netea-Maier RT, Neves BM, Ney PA, Nezis IP, Nguyen HT, Nguyen HP, Nicot AS, Nilsen H, Nilsson P, Nishimura M, Nishino I, Niso-Santano M, Niu H, Nixon RA, Njar VC, Noda T, Noegel AA, Nolte EM, Norberg E, Norga KK, Noureini SK, Notomi S, Notterpek L, Nowikovsky K, Nukina N, Nürnberger T, O'Donnell VB, O'Donovan T, O'Dwyer PJ, Oehme I, Oeste CL, Ogawa M, Ogretmen B, Ogura Y, Oh YJ, Ohmuraya M, Ohshima T, Ojha R, Okamoto K, Okazaki T, Oliver FJ, Ollinger K, Olsson S, Orban DP, Ordonez P, Orhon I, Orosz L, O'Rourke EJ, Orozco H, Ortega AL, Ortona E, Osellame LD, Oshima J, Oshima S, Osiewacz HD, Otomo T, Otsu K, Ou JH, Outeiro TF, Ouyang DY, Ouyang H, Overholtzer M, Ozbun MA, Ozdinler PH, Ozpolat B, Pacelli C, Paganetti P, Page G, Pages G, Pagnini U, Pajak B, Pak SC, Pakos-Zebrucka K, Pakpour N, Palková Z, Palladino F, Pallauf K, Pallet N, Palmieri M, Paludan SR, Palumbo C, Palumbo S, Pampliega O, Pan H, Pan W, Panaretakis T, Pandey A, Pantazopoulou A, Papackova Z, Papademetrio DL, Papassideri I, Papini A, Parajuli N, Pardo J, Parekh VV, Parenti G, Park JI, Park J, Park OK, Parker R, Parlato R, Parys JB, Parzych KR, Pasquet JM, Pasquier B, Pasumarthi KB, Patschan D, Patterson C, Pattingre S, Pattison S, Pause A, Pavenstädt H, Pavone F, Pedrozo Z, Peña FJ, Peñalva MA, Pende M, Peng J, Penna F, Penninger JM, Pensalfini A, Pepe S, Pereira GJ, Pereira PC, Pérez-de la Cruz V, Pérez-Pérez ME, Pérez-Rodríguez D, Pérez-Sala D, Perier C, Perl A, Perlmutter DH, Perrotta I, Pervaiz S, Pesonen M, Pessin JE, Peters GJ, Petersen M, Petrache I, Petrof BJ, Petrovski G, Phang JM, Piacentini M, Pierdominici M, Pierre P, Pierrefite-Carle V, Pietrocola F, Pimentel-Muiños FX, Pinar M, Pineda B, Pinkas-Kramarski R, Pinti M, Pinton P, Piperdi B, Piret JM, Platanias LC, Platta HW, Plowey ED, Pöggeler S, Poirot M, Polčic P, Poletti A, Poon AH, Popelka H, Popova B, Poprawa I, Poulose SM, Poulton J, Powers SK, Powers T, Pozuelo-Rubio M, Prak K, Prange R, Prescott M, Priault M, Prince S, Proia RL, Proikas-Cezanne T, Prokisch H, Promponas VJ, Przyklenk K, Puertollano R, Pugazhenthi S, Puglielli L, Pujol A, Puyal J, Pyeon D, Qi X, Qian WB, Qin ZH, Qiu Y, Qu Z, Quadrilatero J, Quinn F, Raben N, Rabinowich H, Radogna F, Ragusa MJ, Rahmani M, Raina K, Ramanadham S, Ramesh R, Rami A, Randall-Demllo S, Randow F, Rao H, Rao VA, Rasmussen BB, Rasse TM, Ratovitski EA, Rautou PE, Ray SK, Razani B, Reed BH, Reggiori F, Rehm M, Reichert AS, Rein T, Reiner DJ, Reits E, Ren J, Ren X, Renna M, Reusch JE, Revuelta JL, Reyes L, Rezaie AR, Richards RI, Richardson DR, Richetta C, Riehle MA, Rihn BH, Rikihisa Y, Riley BE, Rimbach G, Rippo MR, Ritis K, Rizzi F, Rizzo E, Roach PJ, Robbins J, Roberge M, Roca G, Roccheri MC, Rocha S, Rodrigues CM, Rodríguez CI, de Cordoba SR, Rodriguez-Muela N, Roelofs J, Rogov VV, Rohn TT, Rohrer B, Romanelli D, Romani L, Romano PS, Roncero MI, Rosa JL, Rosello A, Rosen KV, Rosenstiel P, Rost-Roszkowska M, Roth KA, Roué G, Rouis M, Rouschop KM, Ruan DT, Ruano D, Rubinsztein DC, Rucker EB, Rudich A, Rudolf E, Rudolf R, Ruegg MA, Ruiz-Roldan C, Ruparelia AA, Rusmini P, Russ DW, Russo GL, Russo G, Russo R, Rusten TE, Ryabovol V, Ryan KM, Ryter SW, Sabatini DM, Sacher M, Sachse C, Sack MN, Sadoshima J, Saftig P, Sagi-Eisenberg R, Sahni S, Saikumar P, Saito T, Saitoh T, Sakakura K, Sakoh-Nakatogawa M, Sakuraba Y, Salazar-Roa M, Salomoni P, Saluja AK, Salvaterra PM, Salvioli R, Samali A, Sanchez AM, Sánchez-Alcázar JA, Sanchez-Prieto R, Sandri M, Sanjuan MA, Santaguida S, Santambrogio L, Santoni G, Dos Santos CN, Saran S, Sardiello M, Sargent G, Sarkar P, Sarkar S, Sarrias MR, Sarwal MM, Sasakawa C, Sasaki M, Sass M, Sato K, Sato M, Satriano J, Savaraj N, Saveljeva S, Schaefer L, Schaible UE, Scharl M, Schatzl HM, Schekman R, Scheper W, Schiavi A, Schipper HM, Schmeisser H, Schmidt J, Schmitz I, Schneider BE, Schneider EM, Schneider JL, Schon EA, Schönenberger MJ, Schönthal AH, Schorderet DF, Schröder B, Schuck S, Schulze RJ, Schwarten M, Schwarz TL, Sciarretta S, Scotto K, Scovassi AI, Screaton RA, Screen M, Seca H, Sedej S, Segatori L, Segev N, Seglen PO, Seguí-Simarro JM, Segura-Aguilar J, Seki E, Sell C, Seiliez I, Semenkovich CF, Semenza GL, Sen U, Serra AL, Serrano-Puebla A, Sesaki H, Setoguchi T, Settembre C, Shacka JJ, Shajahan-Haq AN, Shapiro IM, Sharma S, She H, Shen CK, Shen CC, Shen HM, Shen S, Shen W, Sheng R, Sheng X, Sheng ZH, Shepherd TG, Shi J, Shi Q, Shi Q, Shi Y, Shibutani S, Shibuya K, Shidoji Y, Shieh JJ, Shih CM, Shimada Y, Shimizu S, Shin DW, Shinohara ML, Shintani M, Shintani T, Shioi T, Shirabe K, Shiri-Sverdlov R, Shirihai O, Shore GC, Shu CW, Shukla D, Sibirny AA, Sica V, Sigurdson CJ, Sigurdsson EM, Sijwali PS, Sikorska B, Silveira WA, Silvente-Poirot S, Silverman GA, Simak J, Simmet T, Simon AK, Simon HU, Simone C, Simons M, Simonsen A, Singh R, Singh SV, Singh SK, Sinha D, Sinha S, Sinicrope FA, Sirko A, Sirohi K, Sishi BJ, Sittler A, Siu PM, Sivridis E, Skwarska A, Slack R, Slaninová I, Slavov N, Smaili SS, Smalley KS, Smith DR, Soenen SJ, Soleimanpour SA, Solhaug A, Somasundaram K, Son JH, Sonawane A, Song C, Song F, Song HK, Song JX, Song W, Soo KY, Sood AK, Soong TW, Soontornniyomkij V, Sorice M, Sotgia F, Soto-Pantoja DR, Sotthibundhu A, Sousa MJ, Spaink HP, Span PN, Spang A, Sparks JD, Speck PG, Spector SA, Spies CD, Springer W, Clair DS, Stacchiotti A, Staels B, Stang MT, Starczynowski DT, Starokadomskyy P, Steegborn C, Steele JW, Stefanis L, Steffan J, Stellrecht CM, Stenmark H, Stepkowski TM, Stern ST, Stevens C, Stockwell BR, Stoka V, Storchova Z, Stork B, Stratoulias V, Stravopodis DJ, Strnad P, Strohecker AM, Ström AL, Stromhaug P, Stulik J, Su YX, Su Z, Subauste CS, Subramaniam S, Sue CM, Suh SW, Sui X, Sukseree S, Sulzer D, Sun FL, Sun J, Sun J, Sun SY, Sun Y, Sun Y, Sun Y, Sundaramoorthy V, Sung J, Suzuki H, Suzuki K, Suzuki N, Suzuki T, Suzuki YJ, Swanson MS, Swanton C, Swärd K, Swarup G, Sweeney ST, Sylvester PW, Szatmari Z, Szegezdi E, Szlosarek PW, Taegtmeyer H, Tafani M, Taillebourg E, Tait SW, Takacs-Vellai K, Takahashi Y, Takáts S, Takemura G, Takigawa N, Talbot NJ, Tamagno E, Tamburini J, Tan CP, Tan L, Tan ML, Tan M, Tan YJ, Tanaka K, Tanaka M, Tang D, Tang D, Tang G, Tanida I, Tanji K, Tannous BA, Tapia JA, Tasset-Cuevas I, Tatar M, Tavassoly I, Tavernarakis N, Taylor A, Taylor GS, Taylor GA, Taylor JP, Taylor MJ, Tchetina EV, Tee AR, Teixeira-Clerc F, Telang S, Tencomnao T, Teng BB, Teng RJ, Terro F, Tettamanti G, Theiss AL, Theron AE, Thomas KJ, Thomé MP, Thomes PG, Thorburn A, Thorner J, Thum T, Thumm M, Thurston TL, Tian L, Till A, Ting JP, Titorenko VI, Toker L, Toldo S, Tooze SA, Topisirovic I, Torgersen ML, Torosantucci L, Torriglia A, Torrisi MR, Tournier C, Towns R, Trajkovic V, Travassos LH, Triola G, Tripathi DN, Trisciuoglio D, Troncoso R, Trougakos IP, Truttmann AC, Tsai KJ, Tschan MP, Tseng YH, Tsukuba T, Tsung A, Tsvetkov AS, Tu S, Tuan HY, Tucci M, Tumbarello DA, Turk B, Turk V, Turner RF, Tveita AA, Tyagi SC, Ubukata M, Uchiyama Y, Udelnow A, Ueno T, Umekawa M, Umemiya-Shirafuji R, Underwood BR, Ungermann C, Ureshino RP, Ushioda R, Uversky VN, Uzcátegui NL, Vaccari T, Vaccaro MI, Váchová L, Vakifahmetoglu-Norberg H, Valdor R, Valente EM, Vallette F, Valverde AM, Van den Berghe G, Van Den Bosch L, van den Brink GR, van der Goot FG, van der Klei IJ, van der Laan LJ, van Doorn WG, van Egmond M, van Golen KL, Van Kaer L, van Lookeren Campagne M, Vandenabeele P, Vandenberghe W, Vanhorebeek I, Varela-Nieto I, Vasconcelos MH, Vasko R, Vavvas DG, Vega-Naredo I, Velasco G, Velentzas AD, Velentzas PD, Vellai T, Vellenga E, Vendelbo MH, Venkatachalam K, Ventura N, Ventura S, Veras PS, Verdier M, Vertessy BG, Viale A, Vidal M, Vieira HL, Vierstra RD, Vigneswaran N, Vij N, Vila M, Villar M, Villar VH, Villarroya J, Vindis C, Viola G, Viscomi MT, Vitale G, Vogl DT, Voitsekhovskaja OV, von Haefen C, von Schwarzenberg K, Voth DE, Vouret-Craviari V, Vuori K, Vyas JM, Waeber C, Walker CL, Walker MJ, Walter J, Wan L, Wan X, Wang B, Wang C, Wang CY, Wang C, Wang C, Wang C, Wang D, Wang F, Wang F, Wang G, Wang HJ, Wang H, Wang HG, Wang H, Wang HD, Wang J, Wang J, Wang M, Wang MQ, Wang PY, Wang P, Wang RC, Wang S, Wang TF, Wang X, Wang XJ, Wang XW, Wang X, Wang X, Wang Y, Wang Y, Wang Y, Wang YJ, Wang Y, Wang Y, Wang YT, Wang Y, Wang ZN, Wappner P, Ward C, Ward DM, Warnes G, Watada H, Watanabe Y, Watase K, Weaver TE, Weekes CD, Wei J, Weide T, Weihl CC, Weindl G, Weis SN, Wen L, Wen X, Wen Y, Westermann B, Weyand CM, White AR, White E, Whitton JL, Whitworth AJ, Wiels J, Wild F, Wildenberg ME, Wileman T, Wilkinson DS, Wilkinson S, Willbold D, Williams C, Williams K, Williamson PR, Winklhofer KF, Witkin SS, Wohlgemuth SE, Wollert T, Wolvetang EJ, Wong E, Wong GW, Wong RW, Wong VK, Woodcock EA, Wright KL, Wu C, Wu D, Wu GS, Wu J, Wu J, Wu M, Wu M, Wu S, Wu WK, Wu Y, Wu Z, Xavier CP, Xavier RJ, Xia GX, Xia T, Xia W, Xia Y, Xiao H, Xiao J, Xiao S, Xiao W, Xie CM, Xie Z, Xie Z, Xilouri M, Xiong Y, Xu C, Xu C, Xu F, Xu H, Xu H, Xu J, Xu J, Xu J, Xu L, Xu X, Xu Y, Xu Y, Xu ZX, Xu Z, Xue Y, Yamada T, Yamamoto A, Yamanaka K, Yamashina S, Yamashiro S, Yan B, Yan B, Yan X, Yan Z, Yanagi Y, Yang DS, Yang JM, Yang L, Yang M, Yang PM, Yang P, Yang Q, Yang W, Yang WY, Yang X, Yang Y, Yang Y, Yang Z, Yang Z, Yao MC, Yao PJ, Yao X, Yao Z, Yao Z, Yasui LS, Ye M, Yedvobnick B, Yeganeh B, Yeh ES, Yeyati PL, Yi F, Yi L, Yin XM, Yip CK, Yoo YM, Yoo YH, Yoon SY, Yoshida K, Yoshimori T, Young KH, Yu H, Yu JJ, Yu JT, Yu J, Yu L, Yu WH, Yu XF, Yu Z, Yuan J, Yuan ZM, Yue BY, Yue J, Yue Z, Zacks DN, Zacksenhaus E, Zaffaroni N, Zaglia T, Zakeri Z, Zecchini V, Zeng J, Zeng M, Zeng Q, Zervos AS, Zhang DD, Zhang F, Zhang G, Zhang GC, Zhang H, Zhang H, Zhang H, Zhang H, Zhang J, Zhang J, Zhang J, Zhang J, Zhang JP, Zhang L, Zhang L, Zhang L, Zhang L, Zhang MY, Zhang X, Zhang XD, Zhang Y, Zhang Y, Zhang Y, Zhang Y, Zhang Y, Zhao M, Zhao WL, Zhao X, Zhao YG, Zhao Y, Zhao Y, Zhao YX, Zhao Z, Zhao ZJ, Zheng D, Zheng XL, Zheng X, Zhivotovsky B, Zhong Q, Zhou GZ, Zhou G, Zhou H, Zhou SF, Zhou XJ, Zhu H, Zhu H, Zhu WG, Zhu W, Zhu XF, Zhu Y, Zhuang SM, Zhuang X, Ziparo E, Zois CE, Zoladek T, Zong WX, Zorzano A, Zughaier SM, , Guidelines for the use and interpretation of assays for monitoring autophagy (3rd edition)., Autophagy 2016 ; 12(1): 1-222.

Thouvenin M, Beilouny B, Badell E, Guiso N, [Corynebacterium ulcerans pulmonary infection], Ann. Biol. Clin. (Paris) 2016 Jan-Feb;74(1):117-20.

Horwood PF, Andronico A, Tarantola A, Salje H, Duong V, Mey C, Ly S, Dussart P, Cauchemez S, Buchy P, Seroepidemiology of Human Enterovirus 71 Infection among Children, Cambodia, Emerging Infect. Dis. 2016 Jan;22(1):92-5.

Tsang TK, Fang VJ, Perera RA, Ip DK, Leung GM, Peiris JS, Cauchemez S, Cowling BJ, Interpreting Seroepidemiologic Studies of Influenza in a Context of Nonbracketing Sera, Epidemiology 2016 Jan;27(1):152-8.

Petit AC, Hozer F, Youssov K, Lavaud P, Hardy P, Mouaffak F, Differential Response to ECT of Psychotic and Affective Symptoms in Huntington’s Disease: A Case Report, J Neuropsychiatry Clin Neurosci 2016;28(1):e3-5.

Rodrigues C, Bavlovič J, Machado E, Amorim J, Peixe L, Novais Â, , KPC-3-Producing Klebsiella pneumoniae in Portugal Linked to Previously Circulating Non-CG258 Lineages and Uncommon Genetic Platforms (Tn4401d-IncFIA and Tn4401d-IncN)., Front Microbiol 2016 ; 7(): 1000.

Manigart O, Trotter C, Findlow H, Assefa A, Mihret W, Moti Demisse T, Yeshitela B, Osei I, Hodgson A, Quaye SL, Sow S, Coulibaly M, Diallo K, Traore A, Collard JM, Moustapha Boukary R, Djermakoye O, Mahamane AE, Jusot JF, Sokhna C, Alavo S, Doucoure S, Ba el H, Dieng M, Diallo A, Daugla DM, Omotara B, Chandramohan D, Hassan-King M, Nascimento M, Woukeu A, Borrow R, Stuart JM, Greenwood B, A Seroepidemiological Study of Serogroup A Meningococcal Infection in the African Meningitis Belt., PLoS One 2016 ; 11(2): e0147928.

Vuong J, Collard JM, Whaley MJ, Bassira I, Seidou I, Diarra S, Ouédraogo RT, Kambiré D, Taylor TH, Sacchi C, Mayer LW, Wang X, Development of Real-Time PCR Methods for the Detection of Bacterial Meningitis Pathogens without DNA Extraction., PLoS One 2016 ; 11(2): e0147765.

Manigart O, Trotter C, Findlow H, Aseffa A, Mihret W, Moti Demisse T, Yeshitela B, Osei I, Hodgson A, Quaye SL, Sow S, Coulibaly M, Diallo K, Traore A, Collard JM, Moustapha Boukary R, Djermakoye O, Mahamane AE, Jusot JF, Sokhna C, Alavo S, Doucoure S, Ba EH, Dieng M, Diallo A, Daugla DM, Omotara B, Chandramohan D, Hassan-King M, Nascimento M, Woukeu A, Borrow R, Stuart JM, Greenwood B, Correction: A Seroepidemiological Study of Serogroup A Meningococcal Infection in the African Meningitis Belt., PLoS One 2016 ; 11(7): e0158938.

Rodriguez-Régent C, Hafsa M, Turc G, Ben Hassen W, Edjlali M, Sermet A, Laquay N, Trystram D, Al-Shareef F, Meder JF, Devaux B, Oppenheim C, Naggara O, Early quantitative CT perfusion parameters variation for prediction of delayed cerebral ischemia following aneurysmal subarachnoid hemorrhage, Eur Radiol 2015 Dec;.

Rocheteau P, Chatre L, Briand D, Mebarki M, Jouvion G, Bardon J, Crochemore C, Serrani P, Lecci PP, Latil M, Matot B, Carlier PG, Latronico N, Huchet C, Lafoux A, Sharshar T, Ricchetti M, Chrétien F, Sepsis induces long-term metabolic and mitochondrial muscle stem cell dysfunction amenable by mesenchymal stem cell therapy, Nat Commun 2015;6:10145.

Waśko I, Hong E, De Paola R, Stella M, Moschioni M, Taha MK, Skoczyńska A, High predicted strain coverage by the multicomponent meningococcal serogroup B vaccine (4CMenB) in Poland, Vaccine 2016 Jan;34(4):510-515.

Mélissanne de Wispelaere, Cécile Khou, Marie-Pascale Frenkiel, Philippe Desprès, Nathalie Pardigon, A Single Amino Acid Substitution in the M Protein Attenuates Japanese Encephalitis Virus in Mammalian Hosts., J Virol. 2015 Dec 9;90(5):2676-89. doi: 10.1128/JVI.01176-15..

Gay N, Rousset D, Huc P, Matheus S, Ledrans M, Rosine J, Cassadou S, Noël H, Seroprevalence of Asian Lineage Chikungunya Virus Infection on Saint Martin Island, 7 Months After the 2013 Emergence, Am. J. Trop. Med. Hyg. 2016 Feb;94(2):393-6.

Killingley B, Greatorex J, Digard P, Wise H, Garcia F, Varsani H, Cauchemez S, Enstone JE, Hayward A, Curran MD, Read RC, Lim WS, Nicholson KG, Nguyen-Van-Tam JS, The environmental deposition of influenza virus from patients infected with influenza A(H1N1)pdm09: Implications for infection prevention and control, J Infect Public Health 2016 May-Jun;9(3):278-88.

Santos JC, Duchateau M, Fredlund J, Weiner A, Mallet A, Schmitt C, Matondo M, Hourdel V, Chamot-Rooke J, Enninga J, The COPII complex and lysosomal VAMP7 determine intracellular Salmonella localization and growth., Cell Microbiol 2015 Dec; 17(12): 1699-720.

Cazorla A, Alanio A, Bretagne S, Polivka M, Shaar-Chneker C, Kaci R, Brouland JP, Chrétien F, Jouvion G, , [Cryptococcus where they are not expected: Five case reports of extra-cerebral and extra-pulmonary cryptococcosis]., Ann Pathol 2015 Dec; 35(6): 479-85.

Shimakawa Y, Njai HF, Takahashi K, Berg L, Ndow G, Jeng-Barry A, Ceesay A, Tamba S, Opoku E, Taal M, Akbar SM, Arai M, D'Alessandro U, Taylor-Robinson SD, Njie R, Mishiro S, Thursz MR, Lemoine M, , Hepatitis E virus infection and acute-on-chronic liver failure in West Africa: a case-control study from The Gambia., Aliment Pharmacol Ther 2016 Feb; 43(3): 375-84.

Faye O, Andronico A, Faye O, Salje H, Boëlle PY, Magassouba N, Bah EI, Koivogui L, Diallo B, Diallo AA, Keita S, Konde MK, Fowler R, Fall G, Cauchemez S, Sall AA, Use of Viremia to Evaluate the Baseline Case Fatality Ratio of Ebola Virus Disease and Inform Treatment Studies: A Retrospective Cohort Study, PLoS Med. 2015 Dec;12(12):e1001908.

Tsang TK, Lau LLH, Cauchemez S, Cowling BJ, Household Transmission of Influenza Virus, Trends Microbiol. 2016 Feb;24(2):123-133.

Diomandé FV, Djingarey MH, Daugla DM, Novak RT, Kristiansen PA, Collard JM, Gamougam K, Kandolo D, Mbakuliyemo N, Mayer L, Stuart J, Clark T, Tevi-Benissan C, Perea WA, Preziosi MP, Marc LaForce F, Caugant D, Messonnier N, Walker O, Greenwood B, Public Health Impact After the Introduction of PsA-TT: The First 4 Years., Clin Infect Dis 2015 Nov; 61 Suppl 5(Suppl 5): S467-72.

Michot JM, Madec Y, Bulifon S, Thorette-Tcherniak C, Fortineau N, Noël N, Lambotte O, El Jahiri Y, Delacour H, Delfraissy JF, Blanc FX, Adenosine deaminase is a useful biomarker to diagnose pleural tuberculosis in low to medium prevalence settings, Diagn. Microbiol. Infect. Dis. 2015 Nov;.

Tebbi A, Levillayer F, Jouvion G, Fiette L, Soubigou G, Varet H, Boudjadja N, Cairo S, Hashimoto K, Suzuki AM, Carninci P, Carissimo A, di Bernardo D, Wei Y, Deficiency of multidrug resistance 2 contributes to cell transformation through oxidative stress, Carcinogenesis 2016 Jan;37(1):39-48.

Yue M, Han X, De Masi L, Zhu C, Ma X, Zhang J, Wu R, Schmieder R, Kaushik RS, Fraser GP, Zhao S, McDermott PF, Weill FX, Mainil JG, Arze C, Fricke WF, Edwards RA, Brisson D, Zhang NR, Rankin SC, Schifferli DM, Allelic variation contributes to bacterial host specificity, Nat Commun 2015;6:8754.

Pachoud B, Llorca PM, Azorin JM, Dubertret C, de Pierrefeu I, Gaillard R, Franck N, [How to improve practices and interventions for work integration of people with schizophrenia in France?], Encephale 2015 Dec;41(6):507-14.

Le Roux I, Konge J, Le Cam L, Flamant P, Tajbakhsh S, Numb is required to prevent p53-dependent senescence following skeletal muscle injury, Nat Commun 2015;6:8528.

Ahmed SA, Abbas MA, Jouvion G, Al-Hatmi AM, de Hoog GS, Kolecka A, Mahgoub el S, Seventeen years of subcutaneous infection by Aspergillus flavus; eumycetoma confirmed by immunohistochemistry, Mycoses 2015 Dec;58(12):728-34.

Sáfadi MA, O'Ryan M, Valenzuela Bravo MT, Brandileone MC, Gorla MC, de Lemos AP, Moreno G, Vazquez JA, López EL, Taha MK, Borrow R, , , The current situation of meningococcal disease in Latin America and updated Global Meningococcal Initiative (GMI) recommendations., Vaccine 2015 Nov; 33(48): 6529-36.

Erasmus JH, Needham J, Raychaudhuri S, Diamond MS, Beasley DW, Morkowski S, Salje H, Fernandez Salas I, Kim DY, Frolov I, Nasar F, Weaver SC, Utilization of an Eilat Virus-Based Chimera for Serological Detection of Chikungunya Infection, PLoS Negl Trop Dis 2015;9(10):e0004119.

Guinet F, Avé P, Filali S, Huon C, Savin C, Huerre M, Fiette L, Carniel E, Dissociation of Tissue Destruction and Bacterial Expansion during Bubonic Plague, PLoS Pathog. 2015 Oct;11(10):e1005222.

Riou J, Aït Ahmed M, Blake A, Vozlinsky S, Brichler S, Eholié S, Boëlle PY, Fontanet A; HCV epidemiology in Africa group, Hepatitis C virus seroprevalence in adults in Africa: a systematic review and meta-analysis., J Viral Hepat. 2015 Oct 19.

Riou J, Aït Ahmed M, Blake A, Vozlinsky S, Brichler S, Eholié S, Boëlle PY, Fontanet A, , Hepatitis C virus seroprevalence in adults in Africa: a systematic review and meta-analysis, J. Viral Hepat. 2016 Apr;23(4):244-55.

Chaumette B, Kebir O, Mam-Lam-Fook C, Morvan Y, Bourgin J, Godsil BP, Plaze M, Gaillard R, Jay TM, Krebs MO, Salivary cortisol in early psychosis: New findings and meta-analysis, Psychoneuroendocrinology 2016 Jan;63:262-70.

, The Diversity of Meningococcal Carriage Across the African Meningitis Belt and the Impact of Vaccination With a Group A Meningococcal Conjugate Vaccine., J Infect Dis 2015 Oct; 212(8): 1298-307.

Plaze M, Mangin JF, Paillère-Martinot ML, Artiges E, Olié JP, Krebs MO, Gaillard R, Martinot JL, Cachia A, “Who is talking to me?” – Self-other attribution of auditory hallucinations and sulcation of the right temporoparietal junction, Schizophr. Res. 2015 Dec;169(1-3):95-100.

Azabou E, Magalhaes E, Braconnier A, Yahiaoui L, Moneger G, Heming N, Annane D, Mantz J, Chrétien F, Durand MC, Lofaso F, Porcher R, Sharshar T, , Early Standard Electroencephalogram Abnormalities Predict Mortality in Septic Intensive Care Unit Patients, PLoS ONE 2015;10(10):e0139969.

Alexandre C, Chaumette B, Martinez G, Christa L, Dupont JM, Kebir O, Gaillard R, Amado I, Krebs MO, Paradoxical Improvement of Schizophrenic Symptoms by a Dopaminergic Agonist: An Example of Personalized Psychiatry in a Copy Number Variation-Carrying Patient, Biol. Psychiatry 2015 Oct;.

Gardner J, Rudd PA, Prow NA, Belarbi E, Roques P, Larcher T, Gresh L, Balmaseda A, Harris E, Schroder WA, Suhrbier A, Infectious Chikungunya Virus in the Saliva of Mice, Monkeys and Humans, PLoS ONE 2015;10(10):e0139481.

Sridhar S, Greenwood B, Head C, Plotkin SA, Sáfadi MA, Saha S, Taha MK, Tomori O, Gessner BD, , Global incidence of serogroup B invasive meningococcal disease: a systematic review., Lancet Infect Dis 2015 Nov; 15(11): 1334-46.

Deshayes S, Daurel C, Cattoir V, Parienti JJ, Quilici ML, de La Blanchardière A, Non-O1, non-O139 Vibrio cholerae bacteraemia: case report and literature review, Springerplus 2015;4:575.

Sutter R, Chalela JA, Leigh R, Kaplan PW, Yenokyan G, Sharshar T, Stevens RD, Significance of Parenchymal Brain Damage in Patients with Critical Illness, Neurocrit Care 2015 Oct;23(2):243-52.

Shimakawa Y, Lemoine M, Bottomley C, Njai HF, Ndow G, Jatta A, Tamba S, Bojang L, Taal M, Nyan O, D'Alessandro U, Njie R, Thursz M, Hall AJ, , Birth order and risk of hepatocellular carcinoma in chronic carriers of hepatitis B virus: a case-control study in The Gambia., Liver Int 2015 Oct; 35(10): 2318-26.

Corruble E, El Asmar K, Trabado S, Verstuyft C, Falissard B, Colle R, Petit AC, Gressier F, Brailly-Tabard S, Ferreri F, Lépine JP, Haffen E, Polosan M, Bourrier C, Perlemuter G, Chanson P, Fève B, Becquemont L, Treating major depressive episodes with antidepressants can induce or worsen metabolic syndrome: results of the METADAP cohort, World Psychiatry 2015 Oct;14(3):366-7.

Matar R, Hong E, Levy C, Guillot M, Cohen R, Taha MK, Madhi F, , Vaccine Failure After Meningococcal C Conjugate Vaccine May Be Linked to Decline of Bactericidal Titers and Absence of Herd Immunity., Pediatr Infect Dis J 2015 Oct; 34(10): 1142-3.

Hervé PL, Lorin V, Jouvion G, Da Costa B, Escriou N, Addition of N-glycosylation sites on the globular head of the H5 hemagglutinin induces the escape of highly pathogenic avian influenza A H5N1 viruses from vaccine-induced immunity, Virology 2015 Sep;486:134-145.

Couderc C, Thiébaut AC, Lawrence C, Bouchiat C, Herrmann JL, Salomon J, Guillemot D, , Fluoroquinolone Impact on Nasal Methicillin-Resistant and Methicillin-Sensitive Staphylococcus aureus Colonization Durations in Neurologic Long-Term-Care Facilities, Antimicrob. Agents Chemother. 2015 Dec;59(12):7621-8.

Salje H, Cauchemez S, Alera MT, Rodriguez-Barraquer I, Thaisomboonsuk B, Srikiatkhachorn A, Lago CB, Villa D, Klungthong C, Tac-An IA, Fernandez S, Velasco JM, Roque VG, Nisalak A, Macareo LR, Levy JW, Cummings D, Yoon IK, Reconstruction of 60 Years of Chikungunya Epidemiology in the Philippines Demonstrates Episodic and Focal Transmission, J. Infect. Dis. 2016 Feb;213(4):604-10.

Burrel S, Désiré N, Marlet J, Dacheux L, Seang S, Caumes E, Bourhy H, Agut H, Boutolleau D, Genetic Diversity within Alphaherpesviruses: Characterization of a Novel Variant of Herpes Simplex Virus 2, J. Virol. 2015 Dec;89(24):12273-83.

Xu C, Chan KH, Tsang TK, Fang VJ, Fung RO, Ip DK, Cauchemez S, Leung GM, Peiris JS, Cowling BJ, Comparative Epidemiology of Influenza B Yamagata- and Victoria-Lineage Viruses in Households, Am. J. Epidemiol. 2015 Oct;182(8):705-13.

Morgand M, Rammaert B, Poirée S, Bougnoux ME, Tran H, Kania R, Chrétien F, Jouvion G, Lortholary O, Chronic invasive Aspergillus sinusitis and otitis with meningeal extension successfully treated by voriconazole, Antimicrob. Agents Chemother. 2015 Sep;.

O'Brien DP, Hernandez B, Durand D, Hourdel V, Sotomayor-Pérez AC, Vachette P, Ghomi M, Chamot-Rooke J, Ladant D, Brier S, Chenal A, Structural models of intrinsically disordered and calcium-bound folded states of a protein adapted for secretion., Sci Rep 2015 Sep; 5(): 14223.

Zhu C, Yue M, Rankin S, Weill FX, Frey J, Schifferli DM, One-step identification of five prominent chicken Salmonella serovars and biotypes, J. Clin. Microbiol. 2015 Sep;.

Ktari S, Le Hello S, Ksibi B, Courdavault L, Mnif B, Maalej S, Fabre L, Hammami A, Weill FX, Carbapenemase-producing Salmonella enterica serotype Kentucky ST198, North Africa, J. Antimicrob. Chemother. 2015 Sep;.

Bouchez V, Hegerle N, Strati F, Njamkepo E, Guiso N, New Data on Vaccine Antigen Deficient Bordetella pertussis Isolates, Vaccines (Basel) 2015;3(3):751-70.

Narat V, Guillot J, Pennec F, Lafosse S, Grüner AC, Simmen B, Bokika Ngawolo JC, Krief S, Intestinal Helminths of Wild Bonobos in Forest-Savanna Mosaic: Risk Assessment of Cross-Species Transmission with Local People in the Democratic Republic of the Congo, Ecohealth 2015 Dec;12(4):621-33.

Bailly S, Leroy O, Montravers P, Constantin JM, Dupont H, Guillemot D, Lortholary O, Mira JP, Perrigault PF, Gangneux JP, Azoulay E, Timsit JF, Antifungal de-escalation was not associated with adverse outcome in critically ill patients treated for invasive candidiasis: post hoc analyses of the AmarCAND2 study data, Intensive Care Med 2015 Nov;41(11):1931-40.

Iyengar P, von Mollendorf C, Tempia S, Moerdyk A, Valley-Omar Z, Hellferscee O, Martinson N, Chhagan M, McMorrow M, Gambhir M, Cauchemez S, Variava E, Masonoke K, Cohen AL, Cohen C, Case-ascertained study of household transmission of seasonal influenza – South Africa, 2013, J. Infect. 2015 Nov;71(5):578-86.

Magpantay FM, Domenech DE Cellès M, Rohani P, King AA, Pertussis immunity and epidemiology: mode and duration of vaccine-induced immunity, Parasitology 2016 06;143(7):835-49.

Sonneville R, Derese I, Marques MB, Langouche L, Derde S, Chatre L, Chrétien F, Annane D, Sharshar T, Van den Berghe G, Vanhorebeek I, Neuropathological Correlates of Hyperglycemia During Prolonged Polymicrobial Sepsis in Mice, Shock 2015 Sep;44(3):245-51.

Rammaert B, Jouvion G, de Chaumont F, Garcia-Hermoso D, Szczepaniak C, Renaudat C, Olivo-Marin JC, Chrétien F, Dromer F, Bretagne S, , Absence of Fungal Spore Internalization by Bronchial Epithelium in Mouse Models Evidenced by a New Bioimaging Approach and Transmission Electronic Microscopy., Am J Pathol 2015 Sep; 185(9): 2421-30.

Stare J, Siami S, Trudel E, Prager-Khoutorsky M, Sharshar T, Bourque CW, Effects of Peritoneal Sepsis on Rat Central Osmoregulatory Neurons Mediating Thirst and Vasopressin Release, J. Neurosci. 2015 Sep;35(35):12188-97.

Hamel R, Dejarnac O, Wichit S, Ekchariyawat P, Neyret A, Luplertlop N, Perera-Lecoin M, Surasombatpattana P, Talignani L, Thomas F, Cao-Lormeau VM, Choumet V, Briant L, Desprès P, Amara A, Yssel H, Missé D, Biology of Zika Virus Infection in Human Skin Cells, J. Virol. 2015 Sep;89(17):8880-96.

Izdebski R, Fiett J, Urbanowicz P, Baraniak A, Derde LP, Bonten MJ, Carmeli Y, Goossens H, Hryniewicz W, Brun-Buisson C, Brisse S, Gniadkowski M, ,, Phylogenetic lineages, clones and β-lactamases in an international collection of Klebsiella oxytoca isolates non-susceptible to expanded-spectrum cephalosporins, J. Antimicrob. Chemother. 2015 Dec;70(12):3230-7.

Lanternier F, Poiree S, Elie C, Garcia-Hermoso D, Bakouboula P, Sitbon K, Herbrecht R, Wolff M, Ribaud P, Lortholary O,, Prospective pilot study of high-dose (10 mg/kg/day) liposomal amphotericin B (L-AMB) for the initial treatment of mucormycosis, J. Antimicrob. Chemother. 2015 Nov;70(11):3116-23.

Gaide N, Pelandakis M, Robveille C, Albaric O, Jouvion G, Souchon M, Risler A, Abadie J, Necrotizing Meningoencephalitis in a Captive Black and White Ruffed Lemur (Varecia variegata variegata) Caused by Acanthamoeba T4 Genotype, J. Comp. Pathol. 2015 Aug;.

Prezado Y, Deman P, Varlet P, Jouvion G, Gil S, Le Clec'H C, Bernard H, Le Duc G, Sarun S, Tolerance to Dose Escalation in Minibeam Radiation Therapy Applied to Normal Rat Brain: Long-Term Clinical, Radiological and Histopathological Analysis, Radiat. Res. 2015 Aug;.

Matheus S, Huc P, Labeau B, Bremand L, Enfissi A, Merle O, Flusin O, Rousset D, Leparc-Goffart I, The use of serum spotted onto filter paper for diagnosing and monitoring Chikungunya virus infection, J. Clin. Virol. 2015 Oct;71:89-92.

Levy JW, Bhoomiboonchoo P, Simasathien S, Salje H, Huang A, Rangsin R, Jarman RG, Fernandez S, Chonticha K, Kittinun H, Gibbons RV, Yoon IK, Elevated transmission of upper respiratory illness among new recruits in military barracks in Thailand, Influenza Other Respir Viruses 2015 Aug;.

Jackson AP, Goyard S, Xia D, Foth BJ, Sanders M, Wastling JM, Minoprio P, Berriman M, Global Gene Expression Profiling through the Complete Life Cycle of Trypanosoma vivax, PLoS Negl Trop Dis 2015 Aug;9(8):e0003975.

Montejo AL, Deakin J, Gaillard R, Harmer C, Meyniel F, Jabourian A, Gabriel C, Gruget C, Klinge C, MacFayden C, Milligan H, Mullings E, Goodwin G, Better sexual acceptability of agomelatine (25 and 50 mg) compared to escitalopram (20 mg) in healthy volunteers. A 9-week, placebo-controlled study using the PRSexDQ scale, J. Psychopharmacol. (Oxford) 2015 Aug;.

Bouchez V, Guiso N, Bordetella pertussis, B. parapertussis, vaccines and cycles of whooping cough, Pathog Dis 2015 Oct;73(7).

Besbes A, Le Goff S, Antunes A, Terrade A, Hong E, Giorgini D, Taha MK, Deghmane AE, , Hyperinvasive Meningococci Induce Intra-nuclear Cleavage of the NF-κB Protein p65/RelA by Meningococcal IgA Protease., PLoS Pathog 2015 Aug; 11(8): e1005078.

Connor TR, Barker CR, Baker KS, Weill FX, Talukder KA, Smith AM, Baker S, Gouali M, Pham Thanh D, Jahan Azmi I, Dias da Silveira W, Semmler T, Wieler LH, Jenkins C, Cravioto A, Faruque SM, Parkhill J, Wook Kim D, Keddy KH, Thomson NR, Species-wide whole genome sequencing reveals historical global spread and recent local persistence in Shigella flexneri, Elife 2015;4:e07335.

Tubiana S, Belchior E, Guillot S, Guiso N, Lévy-Bruhl D,, Monitoring the Impact of Vaccination on Pertussis in Infants Using an Active Hospital-based Pediatric Surveillance Network: Results from 17 Years’ Experience, 1996-2012, France, Pediatr. Infect. Dis. J. 2015 Aug;34(8):814-20.

Landier J, Constantin de Magny G, Garchitorena A, Guégan JF, Gaudart J, Marsollier L, Le Gall P, Giles-Vernick T, Eyangoh S, Fontanet A, Texier G, Seasonal Patterns of Buruli Ulcer Incidence, Central Africa, 2002-2012, Emerging Infect. Dis. 2015 Aug;21(8):1414-7.

Maïnassara HB, Paireau J, Idi I, Pelat JP, Oukem-Boyer OO, Fontanet A, Mueller JE, Response Strategies against Meningitis Epidemics after Elimination of Serogroup A Meningococci, Niger, Emerging Infect. Dis. 2015 Aug;21(8):1322-9.

Costemale-Lacoste J, Gaillard R, Corruble E, Mouaffak F, Is Polyuria a Predictive Sign of Lithium Response in Major Depression?, J Clin Psychopharmacol 2015 Aug;35(4):471-2.

Choumet V, Desprès P, Dengue and other flavivirus infections, Rev. - Off. Int. Epizoot. 2015 Aug;34(2):473-8, 467-72.

Cornick JE, Chaguza C, Harris SR, Yalcin F, Senghore M, Kiran AM, Govindpershad S, Ousmane S, Plessis MD, Pluschke G, Ebruke C, McGee L, Sigaùque B, Collard JM, Antonio M, von Gottberg A, French N, Klugman KP, Heyderman RS, Bentley SD, Everett DB, For The PAGe Consortium, Region-specific diversification of the highly virulent serotype 1 Streptococcus pneumoniae., Microb Genom 2015 Aug; 1(2): e000027.

Nouhin J, Barennes H, Madec Y, Prak S, Hou SV, Kerleguer A, Kim S, Pean P, Rouet F, Low frequency of acute hepatitis E virus (HEV) infections but high past HEV exposure in subjects from Cambodia with mild liver enzyme elevations, unexplained fever or immunodeficiency due to HIV-1 infection, J. Clin. Virol. 2015 Oct;71:22-7.

Lucidarme J, Hill DM, Bratcher HB, Gray SJ, du Plessis M, Tsang RS, Vazquez JA, Taha MK, Ceyhan M, Efron AM, Gorla MC, Findlow J, Jolley KA, Maiden MC, Borrow R, , Genomic resolution of an aggressive, widespread, diverse and expanding meningococcal serogroup B, C and W lineage., J Infect 2015 Nov; 71(5): 544-52.

Bruno A, Alentorn A, Daniau M, Labussière M, Rahimian A, Tabouret E, Polivka M, Jouvet A, Adam C, Figarella-Branger D, Chrétien F, Eimer S, Houillier C, Soussain C, Mokhtari K, Hoang-Xuan K, TERT promoter mutations in primary central nervous system lymphoma are associated with spatial distribution in the splenium, Acta Neuropathol. 2015 Sep;130(3):439-40.

Van Cauteren D, De Valk H, Sommen C, King LA, Jourdan-Da Silva N, Weill FX, Hello SL, Mégraud F, Vaillant V, Desenclos JC, Community Incidence of Campylobacteriosis and Nontyphoidal Salmonellosis, France, 2008-2013, Foodborne Pathog. Dis. 2015 Aug;12(8):664-9.

Latroche C, Matot B, Martins-Bach A, Briand D, Chazaud B, Wary C, Carlier PG, Chrétien F, Jouvion G, Structural and Functional Alterations of Skeletal Muscle Microvasculature in Dystrophin-Deficient mdx Mice, Am. J. Pathol. 2015 Sep;185(9):2482-94.

Lipsitch M, Donnelly CA, Fraser C, Blake IM, Cori A, Dorigatti I, Ferguson NM, Garske T, Mills HL, Riley S, Van Kerkhove MD, Hernán MA, Potential Biases in Estimating Absolute and Relative Case-Fatality Risks during Outbreaks, PLoS Negl Trop Dis 2015 Jul;9(7):e0003846.

Shimakawa Y, Lemoine M, Njai HF, Bottomley C, Ndow G, Goldin RD, Jatta A, Jeng-Barry A, Wegmuller R, Moore SE, Baldeh I, Taal M, D'Alessandro U, Whittle H, Njie R, Thursz M, Mendy M, , Natural history of chronic HBV infection in West Africa: a longitudinal population-based study from The Gambia., Gut 2016 Dec; 65(12): 2007-2016.

Bekondi C, Zanchi R, Seck A, Garin B, Giles-Vernick T, Gody JC, Bata P, Pondy A, Tetang SM, Ba M, Ekobo CS, Rousset D, Sire JM, Maylin S, Chartier L, Njouom R, Vray M, HBV immunization and vaccine coverage among hospitalized children in Cameroon, Central African Republic and Senegal: a cross-sectional study, BMC Infect. Dis. 2015;15(1):267.

Narat V, Pennec F, Simmen B, Ngawolo JC, Krief S, Bonobo habituation in a forest-savanna mosaic habitat: influence of ape species, habitat type, and sociocultural context, Primates 2015 Oct;56(4):339-49.

Kriem MR, Banni B, El Bouchtaoui H, Hamama A, El Marrakchi A, Chaouqy N, Robert-Pillot A, Quilici ML, Prevalence of Vibrio spp. in raw shrimps (Parapenaeus longirostris) and performance of a chromogenic medium for the isolation of Vibrio strains, Lett. Appl. Microbiol. 2015 Sep;61(3):224-30.

Petit-Jentreau L, Jouvion G, Charles P, Majlessi L, Gicquel B, Tailleux L, Ecto-5′-Nucleotidase (CD73) Deficiency in Mycobacterium tuberculosis-Infected Mice Enhances Neutrophil Recruitment, Infect. Immun. 2015 Sep;83(9):3666-74.

Veyrier FJ, Biais N, Morales P, Belkacem N, Guilhen C, Ranjeva S, Sismeiro O, Péhau-Arnaudet G, Rocha EP, Werts C, Taha MK, Boneca IG, , Common Cell Shape Evolution of Two Nasopharyngeal Pathogens., PLoS Genet 2015 Jul; 11(7): e1005338.

Onori R, Gaiarsa S, Comandatore F, Pongolini S, Brisse S, Colombo A, Cassani G, Marone P, Grossi P, Minoja G, Bandi C, Sassera D, Toniolo A, Tracking Nosocomial Klebsiella pneumoniae Infections and Outbreaks by Whole-Genome Analysis: Small-Scale Italian Scenario within a Single Hospital, J. Clin. Microbiol. 2015 Sep;53(9):2861-8.

Alio Sanda A, Granger Farbos A, Hamidou AA, Vonaesch P, Jusot JF, Koeck JL, Collard JM, MLVA-typing on Streptococcus pneumoniae serotype 1 isolated from meningitis cases in Niger before the introduction of PCV-13 revealed a low genetic diversity., Trans R Soc Trop Med Hyg 2015 Jul; 109(7): 477-80.

Simon-Loriere E, Faye O, Faye O, Koivogui L, Magassouba N, Keita S, Thiberge JM, Diancourt L, Bouchier C, Vandenbogaert M, Caro V, Fall G, Buchmann JP, Matranga CB, Sabeti PC, Manuguerra JC, Holmes EC, Sall AA, Distinct lineages of Ebola virus in Guinea during the 2014 West African epidemic, Nature 2015 Aug;524(7563):102-4.

Lemoine M, Shimakawa Y, Nayagam S, Khalil M, Suso P, Lloyd J, Goldin R, Njai HF, Ndow G, Taal M, Cooke G, D'Alessandro U, Vray M, Mbaye PS, Njie R, Mallet V, Thursz M, , The gamma-glutamyl transpeptidase to platelet ratio (GPR) predicts significant liver fibrosis and cirrhosis in patients with chronic HBV infection in West Africa., Gut 2016 Aug; 65(8): 1369-76.

Laurie KL, Engelhardt OG, Wood J, Heath A, Katz JM, Peiris M, Hoschler K, Hungnes O, Zhang W, Van Kerkhove MD, International Laboratory Comparison of Influenza Microneutralization Assays for A(H1N1)pdm09, A(H3N2), and A(H5N1) Influenza Viruses by CONSISE, Clin. Vaccine Immunol. 2015 Aug;22(8):957-64.

Pedergnana V, Abdel-Hamid M, Guergnon J, Theodorou I, Fontanet A, Abel L, Cobat A, Refined association of melanoma differentiation-associated gene 5 variants with spontaneous hepatitis C virus clearance in Egypt, Hepatology 2015 Jun;.

Holt KE, Wertheim H, Zadoks RN, Baker S, Whitehouse CA, Dance D, Jenney A, Connor TR, Hsu LY, Severin J, Brisse S, Cao H, Wilksch J, Gorrie C, Schultz MB, Edwards DJ, Nguyen KV, Nguyen TV, Dao TT, Mensink M, Minh VL, Nhu NT, Schultsz C, Kuntaman K, Newton PN, Moore CE, Strugnell RA, Thomson NR, Genomic analysis of diversity, population structure, virulence, and antimicrobial resistance in Klebsiella pneumoniae, an urgent threat to public health, Proc. Natl. Acad. Sci. U.S.A. 2015 Jul;112(27):E3574-81.

Barreira da Silva R, Laird ME, Yatim N, Fiette L, Ingersoll MA, Albert ML, Dipeptidylpeptidase 4 inhibition enhances lymphocyte trafficking, improving both naturally occurring tumor immunity and immunotherapy, Nat. Immunol. 2015 Aug;16(8):850-8.

de Cellès MD, Pons-Salort M, Varon E, Vibet MA, Ligier C, Letort V, Opatowski L, Guillemot D, Interaction of Vaccination and Reduction of Antibiotic Use Drives Unexpected Increase of Pneumococcal Meningitis, Sci Rep 2015 Jun;5:11293.

Grimaldi-Bensouda L, Abenhaim L, Massol J, Guillemot D, Avouac B, Duru G, Lert F, Magnier AM, Rossignol M, Rouillon F, Begaud B, , Utilization of psychotropic drugs by patients consulting for sleeping disorders in homeopathic and conventional primary care settings: the EPI3 cohort study, Homeopathy 2015 Jul;104(3):170-5.

Levy M, Antunes A, Fiette L, Deghmane AE, Taha MK, , Impact of corticosteroids on experimental meningococcal sepsis in mice., Steroids 2015 Sep; 101(): 96-102.

Vinckier F, Gaillard R, Palminteri S, Rigoux L, Salvador A, Fornito A, Adapa R, Krebs MO, Pessiglione M, Fletcher PC, Confidence and psychosis: a neuro-computational account of contingency learning disruption by NMDA blockade, Mol. Psychiatry 2015 Jun;.

Lecler A, Raymond J, Rodriguez-Régent C, Al Shareef F, Trystram D, Godon-Hardy S, Ben Hassen W, Meder JF, Oppenheim C, Naggara ON, Intracranial Aneurysms: Recurrences More than 10 Years after Endovascular Treatment-A Prospective Cohort Study, Systematic Review, and Meta-Analysis, Radiology 2015 Oct;277(1):173-80.

Rossi O, Baker KS, Phalipon A, Weill FX, Citiulo F, Sansonetti P, Gerke C, Thomson NR, Draft genomes of Shigella strains used by the STOPENTERICS consortium, Gut Pathog 2015;7:14.

Le Flèche-Matéos A, Levast M, Lomprez F, Arnoux Y, Andonian C, Perraud M, Vincent V, Ar Gouilh M, Thiberge JM, Vandenbogaert M, Diancourt L, Caro V, Burguière AM, Manuguerra JC, Rouxiella chamberiensis gen. nov., sp. nov., a member of the family Enterobacteriaceae isolated from parenteral nutrition bags., Int J Syst Evol Microbiol 2015 Jun; 65(Pt 6): 1812-1818.

Le Hello S, Maillard F, Mallet HP, Daudens E, Levy M, Roy V, Branaa P, Bertrand S, Fabre L, Weill FX, Salmonella enterica serotype enteritidis in French Polynesia, South Pacific, 2008-2013, Emerging Infect. Dis. 2015 Jun;21(6):1045-8.

Mounira Smati, Christia Palacios, Yves Cohen, Frédéric Méchaï, Jacques Tankovic, Anne Le Fleche-Mateos, Bertrand Picard, Frederic Gonzalez, Carnobacterium divergens Bacteremia in Woman, Emerging Infectious Diseases, 2015, 21 (6), pp.1081-1082. ⟨10.3201/eid2106.141799⟩.

Smati M, Palacios C, Cohen Y, Méchaï F, Tankovic J, Le Flèche-Mateos A, Picard B, Gonzalez F, Carnobacterium divergens Bacteremia in woman., Emerg Infect Dis 2015 Jun; 21(6): 1081-2.

Van Kerkhove MD, Bento AI, Mills HL, Ferguson NM, Donnelly CA, A review of epidemiological parameters from Ebola outbreaks to inform early public health decision-making, Sci Data 2015;2:150019.

Okasha O, Munier A, Delarocque-Astagneau E, El Houssinie M, Rafik M, Bassim H, Hamid MA, Mohamed MK, Fontanet A, Hepatitis C virus infection and risk factors in health-care workers at Ain Shams University Hospitals, Cairo, Egypt, East. Mediterr. Health J. 2015 Mar;21(3):199-212.

Ben Embarek PK, Van Kerkhove MD, Middle East respiratory syndrome coronavirus (MERS-CoV): current situation 3 years after the virus was first identified, Wkly. Epidemiol. Rec. 2015 May;90(20):245-50.

Gautret P, Blanton J, Dacheux L, Ribadeau-Dumas F, Brouqui P, Parola P, Esposito DH, Bourhy H, Correction: Rabies in nonhuman primates and potential for transmission to humans: a literature review and examination of selected French national data, PLoS Negl Trop Dis 2015 May;9(5):e0003799.

Wong VK, Baker S, Pickard DJ, Parkhill J, Page AJ, Feasey NA, Kingsley RA, Thomson NR, Keane JA, Weill FX, Edwards DJ, Hawkey J, Harris SR, Mather AE, Cain AK, Hadfield J, Hart PJ, Thieu NT, Klemm EJ, Glinos DA, Breiman RF, Watson CH, Kariuki S, Gordon MA, Heyderman RS, Okoro C, Jacobs J, Lunguya O, Edmunds WJ, Msefula C, Chabalgoity JA, Kama M, Jenkins K, Dutta S, Marks F, Campos J, Thompson C, Obaro S, MacLennan CA, Dolecek C, Keddy KH, Smith AM, Parry CM, Karkey A, Mulholland EK, Campbell JI, Dongol S, Basnyat B, Dufour M, Bandaranayake D, Naseri TT, Singh SP, Hatta M, Newton P, Onsare RS, Isaia L, Dance D, Davong V, Thwaites G, Wijedoru L, Crump JA, De Pinna E, Nair S, Nilles EJ, Thanh DP, Turner P, Soeng S, Valcanis M, Powling J, Dimovski K, Hogg G, Farrar J, Holt KE, Dougan G, Phylogeographical analysis of the dominant multidrug-resistant H58 clade of Salmonella Typhi identifies inter- and intracontinental transmission events, Nat. Genet. 2015 Jun;47(6):632-9.

King AA, Domenech de Cellès M, Magpantay FM, Rohani P, Avoidable errors in the modelling of outbreaks of emerging pathogens, with special reference to Ebola, Proc. Biol. Sci. 2015 May;282(1806):20150347.

Pène F, Ait-Oufella H, Taccone FS, Monneret G, Sharshar T, Tamion F, Mira JP, , Insights and limits of translational research in critical care medicine, Ann Intensive Care 2015;5:8.

Lai A, Outin HD, Jabot J, Mégarbane B, Gaudry S, Coudroy R, Louis G, Schneider F, Barbarot N, Roch A, Lerolle N, Luis D, Fourrier F, Renault A, Argaud L, Sharshar T, Gibot S, Bollaert PE, Functional outcome of prolonged refractory status epilepticus, Crit Care 2015;19:199.

Mazi W, Sangal V, Saeed A, Sandstrom G, Weill FX, Yu J, Rapid Genotyping of Shigella sonnei by Use of Multiplex High-Resolution Melting, J. Clin. Microbiol. 2015 Jul;53(7):2389-91.

Baker KS, Dallman TJ, Ashton PM, Day M, Hughes G, Crook PD, Gilbart VL, Zittermann S, Allen VG, Howden BP, Tomita T, Valcanis M, Harris SR, Connor TR, Sintchenko V, Howard P, Brown JD, Petty NK, Gouali M, Thanh DP, Keddy KH, Smith AM, Talukder KA, Faruque SM, Parkhill J, Baker S, Weill FX, Jenkins C, Thomson NR, Intercontinental dissemination of azithromycin-resistant shigellosis through sexual transmission: a cross-sectional study, Lancet Infect Dis 2015 Aug;15(8):913-21.

Tsonis AI, Zisimopoulou P, Lazaridis K, Tzartos J, Matsigkou E, Zouvelou V, Mantegazza R, Antozzi C, Andreetta F, Evoli A, Deymeer F, Saruhan-Direskeneli G, Durmus H, Brenner T, Vaknin A, Berrih-Aknin S, Behin A, Sharshar T, De Baets M, Losen M, Martinez-Martinez P, Kleopa KA, Zamba-Papanicolaou E, Kyriakides T, Kostera-Pruszczyk A, Szczudlik P, Szyluk B, Lavrnic D, Basta I, Peric S, Tallaksen C, Maniaol A, Casasnovas Pons C, Pitha J, Jakubíkova M, Hanisch F, Tzartos SJ, MuSK autoantibodies in myasthenia gravis detected by cell based assay–A multinational study, J. Neuroimmunol. 2015 Jul;284:10-7.

Gambhir M, Clark TA, Cauchemez S, Tartof SY, Swerdlow DL, Ferguson NM, A change in vaccine efficacy and duration of protection explains recent rises in pertussis incidence in the United States, PLoS Comput. Biol. 2015 Apr;11(4):e1004138.

Desdouits M, Kamgang B, Berthet N, Tricou V, Ngoagouni C, Gessain A, Manuguerra JC, Nakouné E, Kazanji M, Genetic characterization of Chikungunya virus in the Central African Republic, Infect. Genet. Evol. 2015 Jul;33:25-31.

Pernet E, Brunet J, Guillemot L, Chignard M, Touqui L, Wu Y, Staphylococcus aureus Adenosine Inhibits sPLA2-IIA-Mediated Host Killing in the Airways, J. Immunol. 2015 Jun;194(11):5312-9.

Weiss N, Venot M, Verdonk F, Chardon A, Le Guennec L, Llerena MC, Raimbourg Q, Taldir G, Luque Y, Fagon JY, Guerot E, Diehl JL, Daily FOUR score assessment provides accurate prognosis of long-term outcome in out-of-hospital cardiac arrest, Rev. Neurol. (Paris) 2015 May;171(5):437-44.

Obadia T, Opatowski L, Temime L, Herrmann JL, Fleury É, Boëlle PY, Guillemot D, Interindividual Contacts and Carriage of Methicillin-Resistant Staphylococcus aureus: A Nested Case-Control Study, Infect Control Hosp Epidemiol 2015 Aug;36(8):922-9.

El Khatib N, Ferroni A, Le Bourgeois M, Chedevergne F, Clairicia M, Avril H, Guiso N, Sermet-Gaudelus I, Persistent Bordetella bronchiseptica infection in a child with cystic fibrosis: Relationship to bacterial phenotype, J. Cyst. Fibros. 2015 Sep;14(5):E13-5.

Imai N, Dorigatti I, Cauchemez S, Ferguson NM, Estimating dengue transmission intensity from sero-prevalence surveys in multiple countries, PLoS Negl Trop Dis 2015 Apr;9(4):e0003719.

Tsang TK, Cowling BJ, Fang VJ, Chan KH, Ip DK, Leung GM, Peiris JS, Cauchemez S, Influenza A Virus Shedding and Infectivity in Households, J. Infect. Dis. 2015 Nov;212(9):1420-8.

Caballero ZC, Costa-Martins AG, Ferreira RC, P Alves JM, Serrano MG, Camargo EP, Buck GA, Minoprio P, G Teixeira MM, Phylogenetic and syntenic data support a single horizontal transference to a Trypanosoma ancestor of a prokaryotic proline racemase implicated in parasite evasion from host defences, Parasit Vectors 2015;8:222.

Contou D, Dacheux L, Bendib I, Jolivet S, Rodriguez C, Tomberli F, Cleret de Langavant L, Lavenir R, Lepelletier A, Larrous F, Troupin C, Bourhy H, Brun-Buisson C, Severe ketoalkalosis as initial presentation of imported human rabies in France, J. Clin. Microbiol. 2015 Jun;53(6):1979-82.

Chereau F, Herindrainy P, Garin B, Huynh BT, Randrianirina F, Padget M, Piola P, Guillemot D, Delarocque-Astagneau E, Colonization of extended-spectrum-β-lactamase- and NDM-1-producing Enterobacteriaceae among pregnant women in the community in a low-income country: a potential reservoir for transmission of multiresistant Enterobacteriaceae to neonates, Antimicrob. Agents Chemother. 2015;59(6):3652-5.

Ekchariyawat P, Hamel R, Bernard E, Wichit S, Surasombatpattana P, Talignani L, Thomas F, Choumet V, Yssel H, Desprès P, Briant L, Missé D, Inflammasome signaling pathways exert antiviral effect against Chikungunya virus in human dermal fibroblasts, Infect. Genet. Evol. 2015 Jun;32:401-8.

Brézillon C, Haustant M, Dupke S, Corre JP, Lander A, Franz T, Monot M, Couture-Tosi E, Jouvion G, Leendertz FH, Grunow R, Mock ME, Klee SR, Goossens PL, Capsules, toxins and AtxA as virulence factors of emerging Bacillus cereus biovar anthracis, PLoS Negl Trop Dis 2015 Apr;9(4):e0003455.

Gaillard R, [The legacy of Jean Delay in psychiatry], Encephale 2015 Apr;41(2):105-7.

Njai HF, Shimakawa Y, Sanneh B, Ferguson L, Ndow G, Mendy M, Sow A, Lo G, Toure-Kane C, Tanaka J, Taal M, D'alessandro U, Njie R, Thursz M, Lemoine M, , Validation of rapid point-of-care (POC) tests for detection of hepatitis B surface antigen in field and laboratory settings in the Gambia, Western Africa., J Clin Microbiol 2015 Apr; 53(4): 1156-63.

Baltazar M, Ngandjio A, Holt KE, Lepillet E, Pardos de la Gandara M, Collard JM, Bercion R, Nzouankeu A, Le Hello S, Dougan G, Fonkoua MC, Weill FX, Multidrug-resistant Salmonella enterica serotype Typhi, Gulf of Guinea Region, Africa., Emerg Infect Dis 2015 Apr; 21(4): 655-9.

Sarah Bonnet, Valérie Choumet, Sébastien Masseglia, Martine Cote, Elisabeth Ferquel, Thomas Lilin, Maud Marsot, Jean-Louis Chapuis, Gwenaël Vourc’h, Infection of Siberian chipmunks (Tamias sibiricus barberi) with Borrelia sp. reveals a low reservoir competence under experimental conditions., Ticks and Tick-borne Diseases, 2015, 6 (3), pp.393-400. ⟨10.1016/j.ttbdis.2015.03.008⟩.

Gheorghe I, Novais Â, Grosso F, Rodrigues C, Chifiriuc MC, Lazar V, Peixe L, , Snapshot on carbapenemase-producing Pseudomonas aeruginosa and Acinetobacter baumannii in Bucharest hospitals reveals unusual clones and novel genetic surroundings for blaOXA-23., J Antimicrob Chemother 2015 Apr; 70(4): 1016-20.

, Agua-Agum J, Ariyarajah A, Blake IM, Cori A, Donnelly CA, Dorigatti I, Dye C, Eckmanns T, Ferguson NM, Fowler RA, Fraser C, Garske T, Hinsley W, Jombart T, Mills HL, Murthy S, Nedjati Gilani G, Nouvellet P, Pelletier L, Riley S, Schumacher D, Shah A, Van Kerkhove MD, Ebola virus disease among children in West Africa, N. Engl. J. Med. 2015 Mar;372(13):1274-7.

Maylin S, Sire JM, Mbaye PS, Simon F, Sarr A, Evra ML, Fall F, Daveiga J, Diallo A, Debonne JM, Chartier L, Vray M, Short-term spontaneous fluctuations of HBV DNA levels in a Senegalese population with chronic hepatitis B, BMC Infect. Dis. 2015;15:154.

Bonnaud EM, Szelechowski M, Bétourné A, Foret C, Thouard A, Gonzalez-Dunia D, Malnou CE, Borna disease virus phosphoprotein modulates epigenetic signaling in neurons to control viral replication, J. Virol. 2015 Jun;89(11):5996-6008.

De Decker S, Vray M, Sistek V, Labeau B, Enfissi A, Rousset D, Matheus S, Evaluation of the diagnostic accuracy of a new dengue IgA capture assay (Platelia Dengue IgA Capture, Bio-Rad) for dengue infection detection, PLoS Negl Trop Dis 2015 Mar;9(3):e0003596.

Langendorf C, Le Hello S, Moumouni A, Gouali M, Mamaty AA, Grais RF, Weill FX, Page AL, Enteric bacterial pathogens in children with diarrhea in Niger: diversity and antimicrobial resistance, PLoS ONE 2015;10(3):e0120275.

Ribadeau Dumas F, N'Diaye DS, Paireau J, Gautret P, Bourhy H, Le Pen C, Yazdanpanah Y, Cost-effectiveness of rabies post-exposure prophylaxis in the context of very low rabies risk: A decision-tree model based on the experience of France, Vaccine 2015 May;33(20):2367-78.

Obadia T, Silhol R, Opatowski L, Temime L, Legrand J, Thiébaut AC, Herrmann JL, Fleury É, Guillemot D, Boëlle PY, , Detailed contact data and the dissemination of Staphylococcus aureus in hospitals, PLoS Comput. Biol. 2015 Mar;11(3):e1004170.

Soize S, Batista AL, Rodriguez Regent C, Trystram D, Tisserand M, Turc G, Serre I, Ben Hassen W, Zuber M, Calvet D, Mas JL, Meder JF, Raymond J, Pierot L, Oppenheim C, Naggara O, Susceptibility vessel sign on T2* magnetic resonance imaging and recanalization results of mechanical thrombectomy with stent retrievers: a multicentre cohort study, Eur. J. Neurol. 2015 Jun;22(6):967-72.

Huynh BT, Padget M, Garin B, Herindrainy P, Kermorvant-Duchemin E, Watier L, Guillemot D, Delarocque-Astagneau E, Burden of bacterial resistance among neonatal infections in low income countries: how convincing is the epidemiological evidence?, BMC Infect. Dis. 2015 Mar;15:127.

Benevides Lde J, Viana MV, Mariano DC, Rocha Fde S, Bagano PC, Folador EL, Pereira FL, Dorella FA, Leal CA, Carvalho AF, Soares Sde C, Carneiro A, Ramos R, Badell-Ocando E, Guiso N, Silva A, Figueiredo H, Azevedo V, Guimarães LC, Genome Sequence of Corynebacterium ulcerans Strain FRC11, Genome Announc 2015 Mar;3(2).

Boulay AC, Mazeraud A, Cisternino S, Saubaméa B, Mailly P, Jourdren L, Blugeon C, Mignon V, Smirnova M, Cavallo A, Ezan P, Avé P, Dingli F, Loew D, Vieira P, Chrétien F, Cohen-Salmon M, Immune quiescence of the brain is set by astroglial connexin 43, J. Neurosci. 2015 Mar;35(10):4427-39.

Gondin J, Théret M, Duhamel G, Pegan K, Mathieu JR, Peyssonnaux C, Cuvellier S, Latroche C, Chazaud B, Bendahan D, Mounier R, Myeloid HIFs are dispensable for resolution of inflammation during skeletal muscle regeneration, J. Immunol. 2015 Apr;194(7):3389-99.

Wyplosz B, Derradji O, Hong E, François H, Durrbach A, Duclos-Vallée JC, Samuel D, Escaut L, Launay O, Vittecoq D, Taha MK, Low immunogenicity of quadrivalent meningococcal vaccines in solid organ transplant recipients, Transpl Infect Dis 2015 Apr;17(2):322-7.

Supervie V, Viard JP, Costagliola D, Breban R, Risk of HIV transmission under combined antiretroviral therapy: toward risk zero?, J. Acquir. Immune Defic. Syndr. 2015 Mar;68(3):e41-2.

Martin C, Burgel PR, Lepage P, Andréjak C, de Blic J, Bourdin A, Brouard J, Chanez P, Dalphin JC, Deslée G, Deschildre A, Gosset P, Touqui L, Dusser D, Host-microbe interactions in distal airways: relevance to chronic airway diseases, Eur Respir Rev 2015 Mar;24(135):78-91.

Obach D, Yazdanpanah Y, Esmat G, Avihingsanon A, Dewedar S, Durier N, Attia A, Anwar WA, Cousien A, Tangkijvanich P, Eholié SP, Doss W, Mostafa A, Fontanet A, Mohamed MK, Deuffic-Burban S, How to optimize hepatitis C virus treatment impact on life years saved in resource-constrained countries, Hepatology 2015 Jul;62(1):31-9.

Pavlov V, Page P, Abi-Lahoud G, Nataf F, Dezamis E, Robin A, Varlet P, Turak B, Dhermain F, Domont J, Louvel G, Souillard-Scemama R, Parraga E, Meder JF, Chrétien F, Devaux B, Pallud J, Combining intraoperative carmustine wafers and Stupp regimen in multimodal first-line treatment of primary glioblastomas, Br J Neurosurg 2015 Aug;29(4):524-31.

Filippone C, Betsem E, Tortevoye P, Cassar O, Bassot S, Froment A, Fontanet A, Gessain A, A Severe Bite From a Nonhuman Primate Is a Major Risk Factor for HTLV-1 Infection in Hunters From Central Africa, Clin. Infect. Dis. 2015 Jun;60(11):1667-76.

Lanternier F, Mahdaviani SA, Barbati E, Chaussade H, Koumar Y, Levy R, Denis B, Brunel AS, Martin S, Loop M, Peeters J, de Selys A, Vanclaire J, Vermylen C, Nassogne MC, Chatzis O, Liu L, Migaud M, Pedergnana V, Desoubeaux G, Jouvion G, Chretien F, Darazam IA, Schäffer AA, Netea MG, De Bruycker JJ, Bernard L, Reynes J, Amazrine N, Abel L, Van der Linden D, Harrison T, Picard C, Lortholary O, Mansouri D, Casanova JL, Puel A, Inherited CARD9 deficiency in otherwise healthy children and adults with Candida species-induced meningoencephalitis, colitis, or both, J. Allergy Clin. Immunol. 2015 Jun;135(6):1558-68.e2.

Kuchcinski G, Mellerio C, Pallud J, Dezamis E, Turc G, Rigaux-Viodé O, Malherbe C, Roca P, Leclerc X, Varlet P, Chrétien F, Devaux B, Meder JF, Oppenheim C, Three-tesla functional MR language mapping: comparison with direct cortical stimulation in gliomas, Neurology 2015 Feb;84(6):560-8.

Koutangni T, Boubacar Maïnassara H, Mueller JE, Incidence, carriage and case-carrier ratios for meningococcal meningitis in the African meningitis belt: a systematic review and meta-analysis, PLoS ONE 2015;10(2):e0116725.

Soize S, Tisserand M, Charron S, Turc G, Ben Hassen W, Labeyrie MA, Legrand L, Mas JL, Pierot L, Meder JF, Baron JC, Oppenheim C, How sustained is 24-hour diffusion-weighted imaging lesion reversal? Serial magnetic resonance imaging in a patient cohort thrombolyzed within 4.5 hours of stroke onset, Stroke 2015 Mar;46(3):704-10.

Giles-Vernick T, Bainilago L, Fofana M, Bata P, Vray M, Home Care of Children With Diarrhea in Bangui’s Therapeutic Landscape (Central African Republic), Qual Health Res 2015 Feb;.

Boulay AC, Saubaméa B, Cisternino S, Mignon V, Mazeraud A, Jourdren L, Blugeon C, Cohen-Salmon M, The Sarcoglycan complex is expressed in the cerebrovascular system and is specifically regulated by astroglial Cx30 channels, Front Cell Neurosci 2015;9:9.

Tsang RS, Hoang L, Tyrrell G, Horsman G, Wylie J, Jamieson FB, Lefebvre B, Taha MK, , Genetic and antigenic characterization of Canadian invasive Neisseria meningitidis serogroup C (MenC) case isolates in the post-MenC conjugate vaccine era, 2009-2013., J Med Microbiol 2015 Feb; 64(Pt 2): 174-9.

Gaillard R, Smadja S, [Acute hallucinatory psychosis], Rev Prat 2015 Feb;65(2):223-7.

Geri G, Dumas F, Chenevier-Gobeaux C, Bouglé A, Daviaud F, Morichau-Beauchant T, Jouven X, Mira JP, Pène F, Empana JP, Cariou A, Is copeptin level associated with 1-year mortality after out-of-hospital cardiac arrest? Insights from the Paris registry*, Crit. Care Med. 2015 Feb;43(2):422-9.

Haridas V, Pean P, Jasenosky LD, Madec Y, Laureillard D, Sok T, Sath S, Borand L, Marcy O, Chan S, Tsitsikov E, Delfraissy JF, Blanc FX, Goldfeld AE, , TB-IRIS, T-cell activation, and remodeling of the T-cell compartment in highly immunosuppressed HIV-infected patients with TB, AIDS 2015 Jan;29(3):263-73.

Giles-Vernick T, Traoré A, Bainilago L, Incertitude, Hepatitis B, and Infant Vaccination in West and Central Africa, Med Anthropol Q 2015 Jan;.

Sultanik P, Mallet V, Lagaye S, Casrouge A, Dorival C, Barthe Y, Fontaine H, Hézode C, Mottez E, Bronowicki JP, Carrat F, Theodorou I, Abel L, Gayat E, Fontanet A, Pol S, Albert ML, , Plasma apolipoprotein H limits HCV replication and associates with response to NS3 protease inhibitors-based therapy, Liver Int. 2015 Jul;35(7):1833-44.

Faye O, Boëlle PY, Heleze E, Faye O, Loucoubar C, Magassouba N, Soropogui B, Keita S, Gakou T, Bah el HI, Koivogui L, Sall AA, Cauchemez S, Chains of transmission and control of Ebola virus disease in Conakry, Guinea, in 2014: an observational study, Lancet Infect Dis 2015 Mar;15(3):320-6.

Aubert L, Taha M, Boo N, Le Strat Y, Deghmane AE, Sanna A, Barret AS, Lévy-Bruhl D, Vandentorren S, Parent du Châtelet I, Serogroup C invasive meningococcal disease among men who have sex with men and in gay-oriented social venues in the Paris region: July 2013 to December 2014, Euro Surveill. 2015 Jan;20(3).

Scemla A, Gerber S, Duquesne A, Parize P, Martinez F, Anglicheau D, Snanoudj R, Zuber M, Bougnoux ME, Legendre C, Lortholary O, Dramatic improvement of severe cryptococcosis-induced immune reconstitution syndrome with adalimumab in a renal transplant recipient, Am. J. Transplant. 2015 Feb;15(2):560-4.

Buffière-Morgado A, Demongeot C, Battistella M, Taieb F, Viguier M, Rybojad M, Tristan A, Bagot M, Petit A, [Ecthyma gangrenosum associated with infection involving a methicillin-sensitive, Panton-Valentine-negative strain of Staphylococcus aureus], Ann Dermatol Venereol 2015 Apr;142(4):262-5.

Colle R, Gressier F, Verstuyft C, Deflesselle E, Lépine JP, Ferreri F, Hardy P, Guilloux JP, Petit AC, Fève B, Falissard B, Becquemont L, Corruble E, Brain-derived neurotrophic factor Val66Met polymorphism and 6-month antidepressant remission in depressed Caucasian patients, J Affect Disord 2015 Apr;175:233-40.

Blériot C, Dupuis T, Jouvion G, Eberl G, Disson O, Lecuit M, , Liver-resident macrophage necroptosis orchestrates type 1 microbicidal inflammation and type-2-mediated tissue repair during bacterial infection., Immunity 2015 Jan; 42(1): 145-58.

Tsang RS, Hoang L, Tyrrell G, Horsman G, Wylie J, Jamieson FB, Lefebvre B, Taha MK, Genetic and antigenic characterization of Canadian invasive Neisseria meningitidis serogroup C (MenC) case isolates in the post MenC-conjugate vaccine era, 2009-2013, J. Med. Microbiol. 2015 Jan;.

Rocheteau P, Vinet M, Chretien F, Dormancy and quiescence of skeletal muscle stem cells, Results Probl Cell Differ 2015;56:215-35.

Gueule D, Fourny G, Ageron E, Le Flèche-Matéos A, Vandenbogaert M, Grimont PAD, Cilas C, Pantoea coffeiphila sp. nov., cause of the ‘potato taste’ of Arabica coffee from the African Great Lakes region., Int J Syst Evol Microbiol 2015 Jan; 65(Pt 1): 23-29.

Vayssier-Taussat M, Cosson JF, Degeilh B, Eloit M, Fontanet A, Moutailler S, Raoult D, Sellal E, Ungeheuer MN, Zylbermann P, How a multidisciplinary ‘One Health’ approach can combat the tick-borne pathogen threat in Europe, Future Microbiol 2015;10(5):809-18.

Sola C, Abadia E, Le Hello S, Weill FX, High-Throughput CRISPR Typing of Mycobacterium tuberculosis Complex and Salmonella enterica Serotype Typhimurium, Methods Mol. Biol. 2015;1311:91-109.

Dubost C, Bouglé A, Hallynck C, Le Dorze M, Roulleau P, Baujard C, Benhamou D, Comparison of monitoring performance of bioreactance versus esophageal Doppler in pediatric patients, Indian J Crit Care Med 2015 Jan;19(1):3-8.

Bröker M, Emonet S, Fazio C, Jacobsson S, Koliou M, Kuusi M, Pace D, Paragi M, Pysik A, Simões MJ, Skoczynska A, Stefanelli P, Toropainen M, Taha MK, Tzanakaki G, Meningococcal serogroup Y disease in Europe: Continuation of high importance in some European regions in 2013, Hum Vaccin Immunother 2015;11(9):2281-6.

Rodrigues C, Machado E, Pires J, Ramos H, Novais Â, Peixe L, , Increase of widespread A, B1 and D Escherichia coli clones producing a high diversity of CTX-M-types in a Portuguese hospital., Future Microbiol 2015 ; 10(7): 1125-31.

Mattheus W, Hanquet G, Collard JM, Vanhoof R, Bertrand S, Changes in Meningococcal Strains in the Era of a Serogroup C Vaccination Campaign: Trends and Evolution in Belgium during the Period 1997-2012., PLoS One 2015 ; 10(10): e0139615.

Briot K, Rouanet S, Schaeverbeke T, Etchepare F, Gaudin P, Perdriger A, Vray M, Steinberg G, Roux C, The effect of tocilizumab on bone mineral density, serum levels of Dickkopf-1 and bone remodeling markers in patients with rheumatoid arthritis, Joint Bone Spine 2015 Mar;82(2):109-15.

Lao M, Caro V, Thiberge JM, Bounmany P, Vongpayloth K, Buchy P, Duong V, Vanhlasy C, Hospied JM, Thongsna M, Choumlivong K, Vongkhamchanh P, Oudavong B, Brey PT, Grandadam M, Co-circulation of dengue virus type 3 genotypes in Vientiane capital, Lao PDR, PLoS ONE 2014;9(12):e115569.

, Agua-Agum J, Ariyarajah A, Aylward B, Blake IM, Brennan R, Cori A, Donnelly CA, Dorigatti I, Dye C, Eckmanns T, Ferguson NM, Formenty P, Fraser C, Garcia E, Garske T, Hinsley W, Holmes D, Hugonnet S, Iyengar S, Jombart T, Krishnan R, Meijers S, Mills HL, Mohamed Y, Nedjati-Gilani G, Newton E, Nouvellet P, Pelletier L, Perkins D, Riley S, Sagrado M, Schnitzler J, Schumacher D, Shah A, Van Kerkhove MD, Varsaneux O, Wijekoon Kannangarage N, West African Ebola epidemic after one year–slowing but not yet under control, N. Engl. J. Med. 2015 Feb;372(6):584-7.

van Gent M, Heuvelman CJ, van der Heide HG, Hallander HO, Advani A, Guiso N, Wirsing von Kőnig CH, Vestrheim DF, Dalby T, Fry NK, Pierard D, Detemmerman L, Zavadilova J, Fabianova K, Logan C, Habington A, Byrne M, Lutyńska A, Mosiej E, Pelaz C, Gröndahl-Yli-Hannuksela K, Barkoff AM, Mertsola J, Economopoulou A, He Q, Mooi FR, Analysis of Bordetella pertussis clinical isolates circulating in European countries during the period 1998-2012, Eur. J. Clin. Microbiol. Infect. Dis. 2015 Apr;34(4):821-30.

Vérollet C, Souriant S, Bonnaud E, Jolicoeur P, Raynaud-Messina B, Kinnaer C, Fourquaux I, Imle A, Benichou S, Fackler OT, Poincloux R, Maridonneau-Parini I, HIV-1 reprograms the migration of macrophages, Blood 2015 Mar;125(10):1611-22.

de Marcellus C, Taha MK, Gaudelus J, Fremeaux-Bacchi V, de Pontual L, Guiddir T, [Complement terminal fraction deficiency revealed at first invasive meningococcal infection], Arch Pediatr 2015 Mar;22(3):296-9.

Tselikas L, Souillard-Scemama R, Naggara O, Mellerio C, Varlet P, Dezamis E, Domont J, Dhermain F, Devaux B, Chrétien F, Meder JF, Pallud J, Oppenheim C, Imaging of gliomas at 1.5 and 3 Tesla – A comparative study, Neuro-oncology 2015 Jun;17(6):895-900.

Jeannot K, Diancourt L, Vaux S, Thouverez M, Ribeiro A, Coignard B, Courvalin P, Brisse S, Molecular epidemiology of carbapenem non-susceptible Acinetobacter baumannii in France, PLoS ONE 2014;9(12):e115452.

Vaux S, Criscuolo A, Desnos-Ollivier M, Diancourt L, Tarnaud C, Vandenbogaert M, Brisse S, Coignard B, Dromer F, , , Multicenter outbreak of infections by Saprochaete clavata, an unrecognized opportunistic fungal pathogen., mBio 2014 Dec; 5(6): .

Tong SY, Holden MT, Nickerson EK, Cooper BS, Köser CU, Cori A, Jombart T, Cauchemez S, Fraser C, Wuthiekanun V, Thaipadungpanit J, Hongsuwan M, Day NP, Limmathurotsakul D, Parkhill J, Peacock SJ, Genome sequencing defines phylogeny and spread of methicillin-resistant Staphylococcus aureus in a high transmission setting, Genome Res. 2015 Jan;25(1):111-8.

Sonneville R, Vanhorebeek I, den Hertog HM, Chrétien F, Annane D, Sharshar T, Van den Berghe G, Critical illness-induced dysglycemia and the brain, Intensive Care Med 2015 Feb;41(2):192-202.

Boulain T, Boisrame-Helms J, Ehrmann S, Lascarrou JB, Bouglé A, Chiche A, Lakhal K, Gaudry S, Perbet S, Desachy A, Cabasson S, Geneau I, Courouble P, Clavieras N, Massanet PL, Bellec F, Falquet Y, Réminiac F, Vignon P, Dequin PF, Meziani F, Volume expansion in the first 4 days of shock: a prospective multicentre study in 19 French intensive care units, Intensive Care Med 2015 Feb;41(2):248-56.

Berthet N, Nakouné E, Kamgang B, Selekon B, Descorps-Declère S, Gessain A, Manuguerra JC, Kazanji M, Molecular characterization of three Zika flaviviruses obtained from sylvatic mosquitoes in the Central African Republic, Vector Borne Zoonotic Dis. 2014 Dec;14(12):862-5.

Breban R, Fontanet A, Feasible HCV targets in Egypt – authors’ reply, Lancet Glob Health 2014 Dec;2(12):e688.

Guet-Revillet H, Coignard-Biehler H, Jais JP, Quesne G, Frapy E, Poirée S, Le Guern AS, Le Flèche-Matéos A, Hovnanian A, Consigny PH, Lortholary O, Nassif X, Nassif A, Join-Lambert O, Bacterial pathogens associated with hidradenitis suppurativa, France., Emerg Infect Dis 2014 Dec; 20(12): 1990-8.

Dumas F, Bougouin W, Geri G, Lamhaut L, Bougle A, Daviaud F, Morichau-Beauchant T, Rosencher J, Marijon E, Carli P, Jouven X, Rea TD, Cariou A, Is epinephrine during cardiac arrest associated with worse outcomes in resuscitated patients?, J. Am. Coll. Cardiol. 2014 Dec;64(22):2360-7.

Ben Hassen W, Machet A, Edjlali-Goujon M, Legrand L, Ladoux A, Mellerio C, Bodiguel E, Gobin-Metteil MP, Trystram D, Rodriguez-Regent C, Mas JL, Plat M, Oppenheim C, Meder JF, Naggara O, Imaging of cervical artery dissection, Diagn Interv Imaging 2014 Dec;95(12):1151-61.

Annane D, Sharshar T, Cognitive decline after sepsis, Lancet Respir Med 2015 Jan;3(1):61-9.

Velard F, Delion M, Lemaire F, Tabary O, Guillaume C, Le Pimpec Barthès F, Touqui L, Gangloff S, Sermet-Gaudelus I, Jacquot J, Cystic fibrosis bone disease: is the CFTR corrector C18 an option for therapy?, Eur. Respir. J. 2015 Mar;45(3):845-8.

Lessler J, Rodriguez-Barraquer I, Cummings DA, Garske T, Van Kerkhove M, Mills H, Truelove S, Hakeem R, Albarrak A, Ferguson NM, , , Estimating Potential Incidence of MERS-CoV Associated with Hajj Pilgrims to Saudi Arabia, 2014, PLoS Curr 2014 Nov;6.

Rodriguez-Régent C, Edjlali-Goujon M, Trystram D, Boulouis G, Ben Hassen W, Godon-Hardy S, Nataf F, Machet A, Legrand L, Ladoux A, Mellerio C, Souillard-Scemama R, Oppenheim C, Meder JF, Naggara O, Non-invasive diagnosis of intracranial aneurysms, Diagn Interv Imaging 2014 Dec;95(12):1163-74.

Mansiaux Y, Salez N, Lapidus N, Setbon M, Andreoletti L, Leruez-Ville M, Cauchemez S, Gougeon ML, Vély F, Schwarzinger M, Abel L, Delabre RM, Flahault A, de Lamballerie X, Carrat F, Causal analysis of H1N1pdm09 influenza infection risk in a household cohort, J Epidemiol Community Health 2015 Mar;69(3):272-7.

Agnememel A, Traincard F, Dartevelle S, Mulard L, Mahamane AE, Oukem-Boyer OO, Denizon M, Kacou-N Douba A, Dosso M, Gake B, Lombart JP, Taha MK, , Development and evaluation of a dipstick diagnostic test for Neisseria meningitidis serogroup X., J Clin Microbiol 2015 Feb; 53(2): 449-54.

Fouquet B, Nikolic J, Larrous F, Bourhy H, Wirblich C, Lagaudrière-Gesbert C, Blondel D, Focal adhesion kinase is involved in rabies virus infection through its interaction with viral phosphoprotein P, J. Virol. 2015 Feb;89(3):1640-51.

Pivette M, Mueller JE, Crépey P, Bar-Hen A, Drug sales data analysis for outbreak detection of infectious diseases: a systematic literature review, BMC Infect. Dis. 2014;14:604.

Carrieri PM, Michel L, Lions C, Cohen J, Vray M, Mora M, Marcellin F, Spire B, Morel A, Roux P, , Methadone induction in primary care for opioid dependence: a pragmatic randomized trial (ANRS Methaville), PLoS ONE 2014;9(11):e112328.

Quillay H, El Costa H, Marlin R, Duriez M, Cannou C, Chrétien F, Fernandez H, Lebreton A, Ighil J, Schwartz O, Barré-Sinoussi F, Nugeyre MT, Menu E, , Distinct characteristics of endometrial and decidual macrophages and regulation of their permissivity to HIV-1 infection by SAMHD1., J Virol 2015 Jan; 89(2): 1329-39.

Carolan K, Garchitorena A, García-Peña GE, Morris A, Landier J, Fontanet A, Le Gall P, Texier G, Marsollier L, Gozlan RE, Eyangoh S, Lo Seen D, Guégan JF, Topography and land cover of watersheds predicts the distribution of the environmental pathogen Mycobacterium ulcerans in aquatic insects, PLoS Negl Trop Dis 2014 Nov;8(11):e3298.

Vahidi Ferdousi L, Rocheteau P, Chayot R, Montagne B, Chaker Z, Flamant P, Tajbakhsh S, Ricchetti M, , More efficient repair of DNA double-strand breaks in skeletal muscle stem cells compared to their committed progeny., Stem Cell Res 2014 Nov; 13(3 Pt A): 492-507.

Bialek-Davenet S, Criscuolo A, Ailloud F, Passet V, Jones L, Delannoy-Vieillard AS, Garin B, Le Hello S, Arlet G, Nicolas-Chanoine MH, Decré D, Brisse S, Genomic definition of hypervirulent and multidrug-resistant Klebsiella pneumoniae clonal groups, Emerging Infect. Dis. 2014 Nov;20(11):1812-20.

Rodrigues C, Machado E, Ramos H, Peixe L, Novais Â, , Expansion of ESBL-producing Klebsiella pneumoniae in hospitalized patients: a successful story of international clones (ST15, ST147, ST336) and epidemic plasmids (IncR, IncFIIK)., Int J Med Microbiol 2014 Nov; 304(8): 1100-8.

Danière F, Edjlali-Goujon M, Mellerio C, Turc G, Naggara O, Tselikas L, Ben Hassen W, Tisserand M, Lamy C, Souillard-Scemama R, Flais S, Meder JF, Oppenheim C, MR screening of candidates for thrombolysis: How to identify stroke mimics?, J Neuroradiol 2014 Dec;41(5):283-95.

Huynh BT, Cottrell G, Cot M, Briand V, Burden of malaria in early pregnancy: a neglected problem?, Clin. Infect. Dis. 2015 Feb;60(4):598-604.

Lamandé-Langle S, Collet C, Hensienne R, Vala C, Chrétien F, Chapleur Y, Mohamadi A, Lacolley P, Regnault V, ‘Click’ glycosylation of peptides through cysteine propargylation and CuAAC, Bioorg. Med. Chem. 2014 Dec;22(23):6672-83.

Hans A, Gaudaire D, Manuguerra JC, Leon A, Gessain A, Laugier C, Berthet N, Zientara S, Combination of an unbiased amplification method and a resequencing microarray for detecting and genotyping equine arteritis virus, J. Clin. Microbiol. 2015 Jan;53(1):287-91.

Landier J, Fontanet A, Texier G, Defining and targeting high-risk populations in Buruli ulcer, Lancet Glob Health 2014 Nov;2(11):e629.

Mohsen A, Bernier A, LeFouler L, Delarocque-Astagneau E, El-Daly M, El-Kafrawy S, El-Mango S, Abdel-Hamid M, Gadallah M, Esmat G, Mohamed MK, Fontanet A, Hepatitis C virus acquisition among Egyptians: analysis of a 10-year surveillance of acute hepatitis C, Trop. Med. Int. Health 2015 Jan;20(1):89-97.

Edjlali M, Gentric JC, Régent-Rodriguez C, Trystram D, Hassen WB, Lion S, Nataf F, Raymond J, Wieben O, Turski P, Meder JF, Oppenheim C, Naggara O, Does aneurysmal wall enhancement on vessel wall MRI help to distinguish stable from unstable intracranial aneurysms?, Stroke 2014 Dec;45(12):3704-6.

Maganga GD, Kapetshi J, Berthet N, Kebela Ilunga B, Kabange F, Mbala Kingebeni P, Mondonge V, Muyembe JJ, Bertherat E, Briand S, Cabore J, Epelboin A, Formenty P, Kobinger G, González-Angulo L, Labouba I, Manuguerra JC, Okwo-Bele JM, Dye C, Leroy EM, Ebola virus disease in the Democratic Republic of Congo, N. Engl. J. Med. 2014 Nov;371(22):2083-91.

Hegerle N, Dore G, Guiso N, Pertactin deficient Bordetella pertussis present a better fitness in mice immunized with an acellular pertussis vaccine, Vaccine 2014 Nov;32(49):6597-600.

Dodet B, Tejiokem MC, Aguemon AR, Bourhy H, Human rabies deaths in Africa: breaking the cycle of indifference, Int Health 2015 Jan;7(1):4-6.

Zouache K, Fontaine A, Vega-Rua A, Mousson L, Thiberge JM, Lourenco-De-Oliveira R, Caro V, Lambrechts L, Failloux AB, Three-way interactions between mosquito population, viral strain and temperature underlying chikungunya virus transmission potential, Proc. Biol. Sci. 2014 Oct;281(1792).

Biville F, Brézillon C, Giorgini D, Taha MK, , Pyrophosphate-mediated iron acquisition from transferrin in Neisseria meningitidis does not require TonB activity., PLoS One 2014 ; 9(10): e107612.

Pedersen K, Sørensen G, Szabo I, Hächler H, Le Hello S, Repeated isolation of Salmonella enterica Goverdhan, a very rare serovar, from Danish poultry surveillance samples, Vet. Microbiol. 2014 Dec;174(3-4):596-9.

Williams AH, Veyrier FJ, Bonis M, Michaud Y, Raynal B, Taha MK, White SW, Haouz A, Boneca IG, , Visualization of a substrate-induced productive conformation of the catalytic triad of the Neisseria meningitidis peptidoglycan O-acetylesterase reveals mechanistic conservation in SGNH esterase family members., Acta Crystallogr D Biol Crystallogr 2014 Oct; 70(Pt 10): 2631-9.

Laird ME, Mohsen A, Duffy D, Mamdouh R, LeFouler L, Casrouge A, El-Daly M, Rafik M, Abdel-Hamid M, Soulier A, Pawlotsky JM, Hézode C, Rosa I, Renard P, Mohamed MK, Bonnard P, Izopet J, Mallet V, Pol S, Albert ML, Fontanet A, , Apolipoprotein H expression is associated with IL28B genotype and viral clearance in hepatitis C virus infection., J. Hepatol. 2014 Oct; 61(4): 770-6.

Beaufrère A, Cherif K, Chrétien F, Lamarche F, Grossin M, [An exceptional cause of skin tumor], Ann Pathol 2014 Oct;34(5):400-2.

Vandentorren S, Guiso N, Badell E, Boisrenoult P, Micaelo M, Troché G, Lecouls P, Moquet MJ, Patey O, Belchior E, Toxigenic Corynebacterium ulcerans in a fatal human case and her feline contacts, France, March 2014, Euro Surveill. 2014;19(38).

Pelat C, Ferguson NM, White PJ, Reed C, Finelli L, Cauchemez S, Fraser C, Optimizing the precision of case fatality ratio estimates under the surveillance pyramid approach, Am. J. Epidemiol. 2014 Nov;180(10):1036-46.

Lemée L, Hong E, Etienne M, Deghmane AE, Delbos V, Terrade A, Berthelot G, Caron F, Taha MK, , Genetic diversity and levels of expression of factor H binding protein among carriage isolates of Neisseria meningitidis., PLoS One 2014 ; 9(9): e107240.

, Ebola virus disease in West Africa–the first 9 months of the epidemic and forward projections, N. Engl. J. Med. 2014 Oct;371(16):1481-95.

Roby MH, Allouche A, Dahdou L, De Castro VC, da Silva PH, Targino BN, Huguet M, Paris C, Chrétien F, Guéant RM, Desobry S, Oster T, Humeau C, Enzymatic production of bioactive docosahexaenoic acid phenolic ester, Food Chem 2015 Mar;171:397-404.

Lavergne A, de Thoisy B, Donato D, Guidez A, Matheus S, Catzeflis F, Lacoste V, Patawa Virus, a New Arenavirus Hosted by Forest Rodents in French Guiana, Ecohealth 2015 Jun;12(2):339-46.

Viguier M, Bachelez H, Poirier B, Kagan J, Battistella M, Aubin F, Touzé A, Carmagnat M, Francès C, Gougeon ML, Fazilleau N, Peripheral and local human papillomavirus 16-specific CD8+ T-cell expansions characterize erosive oral lichen planus, J. Invest. Dermatol. 2015 Feb;135(2):418-24.

Guillemot L, Medina M, Pernet E, Leduc D, Chignard M, Touqui L, Wu Y, Cytosolic phospholipase A2α enhances mouse mortality induced by Pseudomonas aeruginosa pulmonary infection via interleukin 6, Biochimie 2014 Dec;107 Pt A:95-104.

Shimakawa Y, Takao Y, Anderson ST, Taal M, Yamaguchi T, Giana L, Ndow G, Sarr L, Kambi A, Njai HF, Bottomley C, Nyan O, Sabally S, D'Alessandro U, Taylor-Robinson SD, Thursz M, Lemoine M, Njie R, , The prevalence and burden of symptoms in patients with chronic liver diseases in The Gambia, West Africa., Palliat Med 2015 Feb; 29(2): 184-5.

Landier J, Gaudart J, Carolan K, Lo Seen D, Guégan JF, Eyangoh S, Fontanet A, Texier G, Spatio-temporal patterns and landscape-associated risk of Buruli ulcer in Akonolinga, Cameroon, PLoS Negl Trop Dis 2014 Sep;8(9):e3123.

López-Roig M, Bourhy H, Lavenir R, Serra-Cobo J, Seroprevalence dynamics of European bat lyssavirus type 1 in a multispecies bat colony, Viruses 2014 Sep;6(9):3386-99.

Biggerstaff M, Cauchemez S, Reed C, Gambhir M, Finelli L, Estimates of the reproduction number for seasonal, pandemic, and zoonotic influenza: a systematic review of the literature, BMC Infect. Dis. 2014 Sep;14:480.

Sawoo O, Dublineau A, Batéjat C, Zhou P, Manuguerra JC, Leclercq I, , Cleavage of hemagglutinin-bearing lentiviral pseudotypes and their use in the study of influenza virus persistence., PLoS One 2014 ; 9(8): e106192.

Vandenesch A, Turbelin C, Couturier E, Arena C, Jaulhac B, Ferquel E, Choumet V, Saugeon C, Coffinieres E, Blanchon T, Vaillant V, Hanslik T, Incidence and hospitalisation rates of Lyme borreliosis, France, 2004 to 2012, Euro Surveill. 2014 Aug;19(34).

Breban R, Arafa N, Leroy S, Mostafa A, Bakr I, Tondeur L, Abdel-Hamid M, Doss W, Esmat G, Mohamed MK, Fontanet A, Effect of preventive and curative interventions on hepatitis C virus transmission in Egypt (ANRS 1211): a modelling study, Lancet Glob Health 2014 Sep;2(9):e541-e549.

Ladep NG, Dona AC, Lewis MR, Crossey MM, Lemoine M, Okeke E, Shimakawa Y, Duguru M, Njai HF, Fye HK, Taal M, Chetwood J, Kasstan B, Khan SA, Garside DA, Wijeyesekera A, Thillainayagam AV, Banwat E, Thursz MR, Nicholson JK, Njie R, Holmes E, Taylor-Robinson SD, , Discovery and validation of urinary metabotypes for the diagnosis of hepatocellular carcinoma in West Africans., Hepatology 2014 Oct; 60(4): 1291-301.

Cauchemez S, Ferguson NM, Fox A, Mai le Q, Thanh le T, Thai PQ, Thoang DD, Duong TN, Minh Hoa le N, Tran Hien N, Horby P, Determinants of influenza transmission in South East Asia: insights from a household cohort study in Vietnam, PLoS Pathog. 2014 Aug;10(8):e1004310.

Dandash O, Harrison BJ, Adapa R, Gaillard R, Giorlando F, Wood SJ, Fletcher PC, Fornito A, Selective augmentation of striatal functional connectivity following NMDA receptor antagonism: implications for psychosis, Neuropsychopharmacology 2015 Feb;40(3):622-31.

Taha MK, Deghmane AE, , Meningococcal carriage: the dilemma of 4CMenB vaccine., Lancet 2014 Dec; 384(9960): 2088-90.

Dervaux B, Baseilhac E, Fagon JY, , Biot C, Blachier C, Braun E, Debroucker F, Detournay B, Ferretti C, Granger M, Jouan-Flahault C, Lussier MD, Meyer A, Muller S, Pigeon M, De Sahb R, Sannié T, Sapède C, Vray M, Medico-economic evaluation of healthcare products. Methodology for defining a significant impact on French health insurance costs and selection of benchmarks for interpreting results, Therapie 2014 Jul-Aug;69(4):323-8.

Pillet B, Morvan Y, Todd A, Franck N, Duboc C, Grosz A, Launay C, Demily C, Gaillard R, Krebs MO, Amado I, Cognitive remediation therapy (CRT) benefits more to patients with schizophrenia with low initial memory performances, Disabil Rehabil 2015;37(10):846-53.

Lortholary O, Renaudat C, Sitbon K, Madec Y, Denoeud-Ndam L, Wolff M, Fontanet A, Bretagne S, Dromer F, , , Worrisome trends in incidence and mortality of candidemia in intensive care units (Paris area, 2002-2010)., Intensive Care Med 2014 Sep; 40(9): 1303-12.

Fritah S, Lhocine N, Golebiowski F, Mounier J, Andrieux A, Jouvion G, Hay RT, Sansonetti P, Dejean A, Sumoylation controls host anti-bacterial response to the gut invasive pathogen Shigella flexneri, EMBO Rep. 2014 Sep;15(9):965-72.

Zhou Z, McCann A, Weill FX, Blin C, Nair S, Wain J, Dougan G, Achtman M, Transient Darwinian selection in Salmonella enterica serovar Paratyphi A during 450 years of global spread of enteric fever, Proc. Natl. Acad. Sci. U.S.A. 2014 Aug;111(33):12199-204.

Roby MH, De Castro VC, Targino BN, Alves Da Silva PH, Mangavel C, Chretien F, Humeau C, Desobry S, Oxidative stability of DHA phenolic ester, Food Chem 2015 Feb;169:41-8.

Roux AL, Catherinot E, Soismier N, Heym B, Bellis G, Lemonnier L, Chiron R, Fauroux B, Le Bourgeois M, Munck A, Pin I, Sermet I, Gutierrez C, Véziris N, Jarlier V, Cambau E, Herrmann JL, Guillemot D, Gaillard JL, , Comparing Mycobacterium massiliense and Mycobacterium abscessus lung infections in cystic fibrosis patients, J. Cyst. Fibros. 2015 Jan;14(1):63-9.

Bonnard P, Elsharkawy A, Zalata K, Delarocque-Astagneau E, Biard L, Le Fouler L, Hassan AB, Abdel-Hamid M, El-Daly M, Gamal ME, El Kassas M, Bedossa P, Carrat F, Fontanet A, Esmat G, Comparison of liver biopsy and noninvasive techniques for liver fibrosis assessment in patients infected with HCV-genotype 4 in Egypt, J. Viral Hepat. 2015 Mar;22(3):245-53.

Leclercq I, Batéjat C, Burguière AM, Manuguerra JC, , Heat inactivation of the Middle East respiratory syndrome coronavirus., Influenza Other Respir Viruses 2014 Sep; 8(5): 585-6.

Mazeraud A, Polito A, Annane D, Experimental and clinical evidences for glucose control in intensive care: is infused glucose the key point for study interpretation?, Crit Care 2014;18(4):232.

Pommelet V, Vincent QB, Ardant MF, Adeye A, Tanase A, Tondeur L, Rega A, Landier J, Marion E, Alcaïs A, Marsollier L, Fontanet A, Chauty A, Findings in patients from Benin with osteomyelitis and polymerase chain reaction-confirmed Mycobacterium ulcerans infection, Clin. Infect. Dis. 2014 Nov;59(9):1256-64.

Robert-Pillot A, Copin S, Himber C, Gay M, Quilici ML, Occurrence of the three major Vibrio species pathogenic for human in seafood products consumed in France using real-time PCR, Int. J. Food Microbiol. 2014 Oct;189:75-81.

Briant L, Desprès P, Choumet V, Missé D, Role of skin immune cells on the host susceptibility to mosquito-borne viruses, Virology 2014 Sep;464-465:26-32.

Cauchemez S, Ledrans M, Poletto C, Quenel P, de Valk H, Colizza V, Boëlle PY, Local and regional spread of chikungunya fever in the Americas, Euro Surveill. 2014 Jul;19(28):20854.

Issenhuth-Jeanjean S, Roggentin P, Mikoleit M, Guibourdenche M, de Pinna E, Nair S, Fields PI, Weill FX, Supplement 2008-2010 (no. 48) to the White-Kauffmann-Le Minor scheme, Res. Microbiol. 2014 Sep;165(7):526-30.

Duriez M, Quillay H, Madec Y, El Costa H, Cannou C, Marlin R, de Truchis C, Rahmati M, Barré-Sinoussi F, Nugeyre MT, Menu E, Human decidual macrophages and NK cells differentially express Toll-like receptors and display distinct cytokine profiles upon TLR stimulation, Front Microbiol 2014;5:316.

Jacquelin B, Petitjean G, Kunkel D, Liovat AS, Jochems SP, Rogers KA, Ploquin MJ, Madec Y, Barré-Sinoussi F, Dereuddre-Bosquet N, Lebon P, Le Grand R, Villinger F, Müller-Trutwin M, , Innate immune responses and rapid control of inflammation in African green monkeys treated or not with interferon-alpha during primary SIVagm infection., PLoS Pathog 2014 Jul; 10(7): e1004241.

Levy C, Varon E, Taha MK, Béchet S, Bonacorsi S, Cohen R, Bingen E, [Changes in bacterial meningitis in French children resulting from vaccination], Arch Pediatr 2014 Jul;21(7):736-44.

Churcher TS, Cohen JM, Novotny J, Ntshalintshali N, Kunene S, Cauchemez S, Public health. Measuring the path toward malaria elimination, Science 2014 Jun;344(6189):1230-2.

Jombart T, Aanensen DM, Baguelin M, Birrell P, Cauchemez S, Camacho A, Colijn C, Collins C, Cori A, Didelot X, Fraser C, Frost S, Hens N, Hugues J, Höhle M, Opatowski L, Rambaut A, Ratmann O, Soubeyrand S, Suchard MA, Wallinga J, Ypma R, Ferguson N., OutbreakTools: a new platform for disease outbreak analysis using the R software, Epidemics. 2014 Jun;7:28-34.

Edjlali M, Roca P, Gentric JC, Trystram D, Rodriguez-Régent C, Nataf F, Chrétien F, Wieben O, Turski P, Meder JF, Naggara O, Oppenheim C, Advanced technologies applied to physiopathological analysis of central nervous system aneurysms and vascular malformations, Diagn Interv Imaging 2014 Dec;95(12):1187-93.

Bernard SC, Simpson N, Join-Lambert O, Federici C, Laran-Chich MP, Maïssa N, Bouzinba-Ségard H, Morand PC, Chretien F, Taouji S, Chevet E, Janel S, Lafont F, Coureuil M, Segura A, Niedergang F, Marullo S, Couraud PO, Nassif X, Bourdoulous S, Pathogenic Neisseria meningitidis utilizes CD147 for vascular colonization, Nat. Med. 2014 Jul;20(7):725-31.

Sharshar T, Bozza F, Chrétien F, Neuropathological processes in sepsis, Lancet Neurol 2014 Jun;13(6):534-6.

Rachas A, Nakouné E, Bouscaillou J, Paireau J, Selekon B, Senekian D, Fontanet A, Kazanji M, Timeliness of yellow fever surveillance, Central African Republic, Emerging Infect. Dis. 2014 Jun;20(6):1004-8.

Shimakawa Y, Lemoine M, Mendy M, Njai HF, D'Alessandro U, Hall A, Thursz M, Njie R, , Population-based interventions to reduce the public health burden related with hepatitis B virus infection in the gambia, west Africa., Trop Med Health 2014 Jun; 42(2 Suppl): 59-64.

Jusot V, Aberrane S, Alé F, Laouali B, Moussa I, Alio SA, Adehossi E, Collard JM, Grais RF, Prevalence of Bordetella infection in a hospital setting in niamey, niger., J Trop Pediatr 2014 Jun; 60(3): 223-30.

Shimakawa Y, Bottomley C, Njie R, Mendy M, , The association between maternal hepatitis B e antigen status, as a proxy for perinatal transmission, and the risk of hepatitis B e antigenaemia in Gambian children., BMC Public Health 2014 May; 14(): 532.

Ben Hassen W, Wagner M, Lucidarme O, Unusual hepatic lesion in a patient with a lung tumor, Gastroenterology 2014 Jul;147(1):e7-8.

Luquero FJ, Grout L, Ciglenecki I, Sakoba K, Traore B, Heile M, Diallo AA, Itama C, Page AL, Quilici ML, Mengel MA, Eiros JM, Serafini M, Legros D, Grais RF, Use of Vibrio cholerae vaccine in an outbreak in Guinea, N. Engl. J. Med. 2014 May;370(22):2111-20.

Jauréguiberry S, Ndour PA, Roussel C, Ader F, Safeukui I, Nguyen M, Biligui S, Ciceron L, Mouri O, Kendjo E, Bricaire F, Vray M, Angoulvant A, Mayaux J, Haldar K, Mazier D, Danis M, Caumes E, Thellier M, Buffet P,, Postartesunate delayed hemolysis is a predictable event related to the lifesaving effect of artemisinins, Blood 2014 Jul;124(2):167-75.

Guiddir T, Deghmane AE, Giorgini D, Taha MK, , Lipocalin 2 in cerebrospinal fluid as a marker of acute bacterial meningitis., BMC Infect Dis 2014 May; 14(): 276.

Pivette M, Mueller JE, Crépey P, Bar-Hen A, Surveillance of gastrointestinal disease in France using drug sales data, Epidemics 2014 Sep;8:1-8.

Mauras T, Masson M, Ducros A, Bourgin J, Del Cul A, Fossati P, Gaillard R, Reversible cerebral vasoconstriction syndrome and treatment with monoamine oxidase inhibitor, Aust N Z J Psychiatry 2014 Jul;48(7):684-5.

Garchitorena A, Roche B, Kamgang R, Ossomba J, Babonneau J, Landier J, Fontanet A, Flahault A, Eyangoh S, Guégan JF, Marsollier L, Mycobacterium ulcerans ecological dynamics and its association with freshwater ecosystems and aquatic communities: results from a 12-month environmental survey in Cameroon, PLoS Negl Trop Dis 2014 May;8(5):e2879.

Betsem E, Cassar O, Afonso PV, Fontanet A, Froment A, Gessain A, Epidemiology and genetic variability of HHV-8/KSHV in Pygmy and Bantu populations in Cameroon, PLoS Negl Trop Dis 2014 May;8(5):e2851.

Gautret P, Blanton J, Dacheux L, Ribadeau-Dumas F, Brouqui P, Parola P, Esposito DH, Bourhy H, Rabies in nonhuman primates and potential for transmission to humans: a literature review and examination of selected French national data, PLoS Negl Trop Dis 2014 May;8(5):e2863.

Garske T, Van Kerkhove MD, Yactayo S, Ronveaux O, Lewis RF, Staples JE, Perea W, Ferguson NM, , Yellow Fever in Africa: estimating the burden of disease and impact of mass vaccination from outbreak and serological data, PLoS Med. 2014 May;11(5):e1001638.

Petit AC, Quesseveur G, Gressier F, Colle R, David DJ, Gardier AM, Ferreri F, Lépine JP, Falissard B, Verstuyft C, Guiard BP, Corruble E, Converging translational evidence for the involvement of the serotonin 2A receptor gene in major depressive disorder, Prog. Neuropsychopharmacol. Biol. Psychiatry 2014 Oct;54:76-82.

Paireau J, Maïnassara HB, Jusot JF, Collard JM, Idi I, Moulia-Pelat JP, Mueller JE, Fontanet A, Spatio-temporal factors associated with meningococcal meningitis annual incidence at the health centre level in Niger, 2004-2010., PLoS Negl Trop Dis 2014 May; 8(5): e2899.

Moura DS, Georgin-Lavialle S, Gaillard R, Hermine O, Neuropsychological features of adult mastocytosis, Immunol Allergy Clin North Am 2014 May;34(2):407-22.

Tzanakaki G, Hong E, Kesanopoulos K, Xirogianni A, Bambini S, Orlandi L, Comanducci M, Muzzi A, Taha MK, Diversity of Greek meningococcal serogroup B isolates and estimated coverage of the 4CMenB meningococcal vaccine, BMC Microbiol. 2014 Apr;14:111.

Marcy O, Laureillard D, Madec Y, Chan S, Mayaud C, Borand L, Prak N, Kim C, Lak KK, Hak C, Dim B, Sok T, Delfraissy JF, Goldfeld AE, Blanc FX, , Causes and determinants of mortality in HIV-infected adults with tuberculosis: an analysis from the CAMELIA ANRS 1295-CIPRA KH001 randomized trial, Clin. Infect. Dis. 2014 Aug;59(3):435-45.

Pons-Salort M, Serra-Cobo J, Jay F, López-Roig M, Lavenir R, Guillemot D, Letort V, Bourhy H, Opatowski L, Insights into persistence mechanisms of a zoonotic virus in bat colonies using a multispecies metapopulation model, PLoS ONE 2014;9(4):e95610.

de Thoisy B, Matheus S, Catzeflis F, Clément L, Barrioz S, Guidez A, Donato D, Cornu JF, Brunaux O, Guitet S, Lacoste V, Lavergne A, Maripa hantavirus in French Guiana: phylogenetic position and predicted spatial distribution of rodent hosts, Am. J. Trop. Med. Hyg. 2014 Jun;90(6):988-92.

Jombart T, Aanensen DM, Baguelin M, Birrell P, Cauchemez S, Camacho A, Colijn C, Collins C, Cori A, Didelot X, Fraser C, Frost S, Hens N, Hugues J, Höhle M, Opatowski L, Rambaut A, Ratmann O, Soubeyrand S, Suchard MA, Wallinga J, Ypma R, Ferguson N, OutbreakTools: a new platform for disease outbreak analysis using the R software, Epidemics 2014 Jun;7:28-34.

Baize S, Pannetier D, Oestereich L, Rieger T, Koivogui L, Magassouba N, Soropogui B, Sow MS, Keïta S, De Clerck H, Tiffany A, Dominguez G, Loua M, Traoré A, Kolié M, Malano ER, Heleze E, Bocquin A, Mély S, Raoul H, Caro V, Cadar D, Gabriel M, Pahlmann M, Tappe D, Schmidt-Chanasit J, Impouma B, Diallo AK, Formenty P, Van Herp M, Günther S, Emergence of Zaire Ebola virus disease in Guinea, N. Engl. J. Med. 2014 Oct;371(15):1418-25.

Cauchemez S, Van Kerkhove MD, Archer BN, Cetron M, Cowling BJ, Grove P, Hunt D, Kojouharova M, Kon P, Ungchusak K, Oshitani H, Pugliese A, Rizzo C, Saour G, Sunagawa T, Uzicanin A, Wachtel C, Weisfuse I, Yu H, Nicoll A, School closures during the 2009 influenza pandemic: national and local experiences, BMC Infect. Dis. 2014 Apr;14:207.

Taieb F, Aghokeng AF, Eymard-Duvernay S, Chia JE, Einterz E, Mpoudi-Ngole E, Peeters M, Molina JM, Delaporte E, Challenges of antiretroviral treatment monitoring in rural and remote-access regions in Africa, AIDS Res. Hum. Retroviruses 2014 Jul;30(7):623-5.

Couderc C, Jolivet S, Thiébaut AC, Ligier C, Remy L, Alvarez AS, Lawrence C, Salomon J, Herrmann JL, Guillemot D, , Fluoroquinolone use is a risk factor for methicillin-resistant Staphylococcus aureus acquisition in long-term care facilities: a nested case-case-control study, Clin. Infect. Dis. 2014 Jul;59(2):206-15.

Phillips RO, Sarfo FS, Landier J, Oldenburg R, Frimpong M, Wansbrough-Jones M, Abass K, Thompson W, Forson M, Fontanet A, Niang F, Demangel C, , Combined inflammatory and metabolic defects reflected by reduced serum protein levels in patients with Buruli ulcer disease., PLoS Negl Trop Dis 2014 Apr; 8(4): e2786.

Supervie V, Viard JP, Costagliola D, Breban R, Heterosexual risk of HIV transmission per sexual act under combined antiretroviral therapy: systematic review and bayesian modeling, Clin. Infect. Dis. 2014 Jul;59(1):115-22.

Ibitokou SA, Boström S, Brutus L, Tuikue Ndam N, Vianou B, Agbowaï C, Amadoudji Zin M, Huynh BT, Massougbodji A, Deloron P, Troye-Blomberg M, Fievet N, Luty AJ, Submicroscopic infections with Plasmodium falciparum during pregnancy and their association with circulating cytokine, chemokine, and cellular profiles, Clin. Vaccine Immunol. 2014 Jun;21(6):859-66.

Van Bortel W, Dorleans F, Rosine J, Blateau A, Rousset D, Matheus S, Leparc-Goffart I, Flusin O, Prat C, Cesaire R, Najioullah F, Ardillon V, Balleydier E, Carvalho L, Lemaître A, Noel H, Servas V, Six C, Zurbaran M, Leon L, Guinard A, van den Kerkhof J, Henry M, Fanoy E, Braks M, Reimerink J, Swaan C, Georges R, Brooks L, Freedman J, Sudre B, Zeller H, Chikungunya outbreak in the Caribbean region, December 2013 to March 2014, and the significance for Europe, Euro Surveill. 2014 Apr;19(13).

Pilmis B, Parize P, Zahar JR, Lortholary O, Alternatives to carbapenems for infections caused by ESBL-producing Enterobacteriaceae, Eur. J. Clin. Microbiol. Infect. Dis. 2014 Aug;33(8):1263-5.

Brehony C, Trotter CL, Ramsay ME, Chandra M, Jolley KA, van der Ende A, Carion F, Berthelsen L, Hoffmann S, Harðardóttir H, Vazquez JA, Murphy K, Toropainen M, Caniça M, Ferreira E, Diggle M, Edwards GF, Taha MK, Stefanelli P, Kriz P, Gray SJ, Fox AJ, Jacobsson S, Claus H, Vogel U, Tzanakaki G, Heuberger S, Caugant DA, Frosch M, Maiden MC, Implications of differential age distribution of disease-associated meningococcal lineages for vaccine development, Clin. Vaccine Immunol. 2014 Jun;21(6):847-53.

Loison E, Poirier-Beaudouin B, Seffer V, Paoletti A, Abitbol V, Tartour E, Launay O, Gougeon ML, Suppression by thimerosal of ex-vivo CD4+ T cell response to influenza vaccine and induction of apoptosis in primary memory T cells, PLoS ONE 2014;9(4):e92705.

Ley B, Le Hello S, Lunguya O, Lejon V, Muyembe JJ, Weill FX, Jacobs J, Invasive Salmonella enterica serotype typhimurium infections, Democratic Republic of the Congo, 2007-2011, Emerging Infect. Dis. 2014 Apr;20(4):701-4.

Page AL, Jusot V, Mamaty AA, Adamou L, Kaplon J, Pothier P, Djibo A, Manzo ML, Toure B, Langendorf C, Collard JM, Grais RF, Rotavirus surveillance in urban and rural areas of Niger, April 2010-March 2012., Emerg Infect Dis 2014 Apr; 20(4): 573-80.

Arias-Goeta C, Moutailler S, Mousson L, Zouache K, Thiberge JM, Caro V, Rougeon F, Failloux AB, Chikungunya virus adaptation to a mosquito vector correlates with only few point mutations in the viral envelope glycoprotein, Infect. Genet. Evol. 2014 Jun;24:116-26.

Tsang TK, Cauchemez S, Perera RA, Freeman G, Fang VJ, Ip DK, Leung GM, Malik Peiris JS, Cowling BJ, Association between antibody titers and protection against influenza virus infection within households, J. Infect. Dis. 2014 Sep;210(5):684-92.

Daviaud F, Dumas F, Demars N, Geri G, Bouglé A, Morichau-Beauchant T, Nguyen YL, Bougouin W, Pène F, Charpentier J, Cariou A, Blood glucose level and outcome after cardiac arrest: insights from a large registry in the hypothermia era, Intensive Care Med 2014 Jun;40(6):855-62.

Fraser C, Lythgoe K, Leventhal GE, Shirreff G, Hollingsworth TD, Alizon S, Bonhoeffer S, Virulence and pathogenesis of HIV-1 infection: an evolutionary perspective., Science 2014 Mar; 343(6177): 1243727.

Grimaldi-Bensouda L, Bégaud B, Rossignol M, Avouac B, Lert F, Rouillon F, Bénichou J, Massol J, Duru G, Magnier AM, Abenhaim L, Guillemot D, Management of upper respiratory tract infections by different medical practices, including homeopathy, and consumption of antibiotics in primary care: the EPI3 cohort study in France 2007-2008, PLoS ONE 2014;9(3):e89990.

Cousien A, Obach D, Deuffic-Burban S, Mostafa A, Esmat G, Canva V, El Kassas M, El-Sayed M, Anwar WA, Fontanet A, Mohamed MK, Yazdanpanah Y, Is expert opinion reliable when estimating transition probabilities? The case of HCV-related cirrhosis in Egypt, BMC Med Res Methodol 2014;14:39.

Velard F, Delion M, Le Henaff C, Guillaume C, Gangloff S, Jacquot J, Tabary O, Touqui L, Barthes F, Sermet-Gaudelus I, Cystic fibrosis and bone disease: defective osteoblast maturation with the F508del mutation in cystic fibrosis transmembrane conductance regulator, Am. J. Respir. Crit. Care Med. 2014 Mar;189(6):746-8.

Martin-Iguacel R, Kurtzhals J, Jouvion G, Nielsen SD, Llibre JM, Progressive disseminated histoplasmosis in the HIV population in Europe in the HAART era. Case report and literature review, Infection 2014 Aug;42(4):611-20.

Giles-Vernick T, Owona-Ntsama J, Landier J, Eyangoh S, The puzzle of Buruli ulcer transmission, ethno-ecological history and the end of “love” in the Akonolinga district, Cameroon, Soc Sci Med 2015 Mar;129:20-7.

Borand L, Madec Y, Laureillard D, Chou M, Marcy O, Pheng P, Prak N, Kim C, Lak KK, Hak C, Dim B, Nerrienet E, Fontanet A, Sok T, Goldfeld AE, Blanc FX, Taburet AM, Plasma concentrations, efficacy and safety of efavirenz in HIV-infected adults treated for tuberculosis in Cambodia (ANRS 1295-CIPRA KH001 CAMELIA trial), PLoS ONE 2014;9(3):e90350.

Bröker M, Bukovski S, Culic D, Jacobsson S, Koliou M, Kuusi M, Simões MJ, Skoczynska A, Toropainen M, Taha MK, Tzanakaki G, Meningococcal serogroup Y emergence in Europe: high importance in some European regions in 2012, Hum Vaccin Immunother 2014;10(6):1725-8.

Marteyn BS, Karimova G, Fenton AK, Gazi AD, West N, Touqui L, Prevost MC, Betton JM, Poyraz O, Ladant D, Gerdes K, Sansonetti PJ, Tang CM, ZapE is a novel cell division protein interacting with FtsZ and modulating the Z-ring dynamics, MBio 2014 Mar;5(2):e00022-14.

Benmohamed F, Medina M, Wu YZ, Maschalidi S, Jouvion G, Guillemot L, Chignard M, Manoury B, Touqui L, Toll-like receptor 9 deficiency protects mice against Pseudomonas aeruginosa lung infection, PLoS ONE 2014;9(3):e90466.

Lemoine M, Shimakawa Y, Nayagam S, Njie R, Thursz M, , Commentary: how long does one need to fast before a Fibroscan examination? Authors’ reply., Aliment Pharmacol Ther 2014 Mar; 39(5): 541-2.

Bouglé A, Mira JP, Short-acting β-blocker administration in patients with septic shock, JAMA 2014 Feb;311(7):736-7.

Duffy D, Mamdouh R, Laird M, Soneson C, Le Fouler L, El-Daly M, Casrouge A, Decalf J, Abbas A, Eldin NS, Fontes M, Abdel-Hamid M, Mohamed MK, Rafik M, Fontanet A, Albert ML, The ABCs of viral hepatitis that define biomarker signatures of acute viral hepatitis, Hepatology 2014 Apr;59(4):1273-82.

Viladés C, Escoté X, López-Dupla M, Martinez E, Domingo P, Asensi V, Leal M, Peraire J, Inza MI, Arnedo M, Gutiérrez M, Valle-Garay E, Ferrando-Martinez S, Olona M, Alba V, Sirvent JJ, Gatell JM, Vidal F, , Involvement of the LPS-LPB-CD14-MD2-TLR4 inflammation pathway in HIV-1/HAART-associated lipodystrophy syndrome (HALS), J. Antimicrob. Chemother. 2014 Jun;69(6):1653-9.

Sharshar T, Citerio G, Andrews PJ, Chieregato A, Latronico N, Menon DK, Puybasset L, Sandroni C, Stevens RD, Neurological examination of critically ill patients: a pragmatic approach. Report of an ESICM expert panel, Intensive Care Med 2014 Apr;40(4):484-95.

Parize P, Billaud S, Bienvenu AL, Bourdy S, le Pogam MA, Reix P, Picot S, Robert R, Lortholary O, Bouchara JP, Durieu I, Impact of Scedosporium apiospermum complex seroprevalence in patients with cystic fibrosis, J. Cyst. Fibros. 2014 Dec;13(6):667-73.

Domenech de Cellès M, Riolo MA, Magpantay FM, Rohani P, King AA, Epidemiological evidence for herd immunity induced by acellular pertussis vaccines, Proc. Natl. Acad. Sci. U.S.A. 2014 Feb;111(7):E716-7.

Obach D, Deuffic-Burban S, Esmat G, Anwar WA, Dewedar S, Canva V, Cousien A, Doss W, Mostafa A, Pol S, Buti M, Siebert U, Fontanet A, Mohamed MK, Yazdanpanah Y, Effectiveness and cost-effectiveness of immediate versus delayed treatment of hepatitis C virus-infected patients in a country with limited resources: the case of Egypt, Clin. Infect. Dis. 2014 Apr;58(8):1064-71.

Si-Tahar M, Blanc F, Furio L, Chopy D, Balloy V, Lafon M, Chignard M, Fiette L, Langa F, Charneau P, Pothlichet J, Protective role of LGP2 in influenza virus pathogenesis, J. Infect. Dis. 2014 Jul;210(2):214-23.

Gay N, Le Hello S, Weill FX, de Thoisy B, Berger F, Salmonella serotypes in reptiles and humans, French Guiana, Vet. Microbiol. 2014 May;170(1-2):167-71.

Sharshar T, Mazeraud A, Verdonk F, Chrétien F, Brain perfusion in sepsis or to resolve the macro part of the micro, Crit. Care Med. 2014 Feb;42(2):485-6.

Polyakov PD, Duval JF, Speciation dynamics of metals in dispersion of nanoparticles with discrete distribution of charged binding sites, Phys Chem Chem Phys 2014 Feb;16(5):1999-2010.

Blanchet C, Jouvion G, Fitting C, Cavaillon JM, Adib-Conquy M, Protective or deleterious role of scavenger receptors SR-A and CD36 on host resistance to Staphylococcus aureus depends on the site of infection, PLoS ONE 2014;9(1):e87927.

Fabre L, Le Hello S, Roux C, Issenhuth-Jeanjean S, Weill FX, CRISPR is an optimal target for the design of specific PCR assays for salmonella enterica serotypes Typhi and Paratyphi A, PLoS Negl Trop Dis 2014;8(1):e2671.

Madhi F, Levy C, Deghmane AE, Béchet S, Cohen R, , , Taha MK, [Impact of corticosteroids in the immediate management of invasive meningococcal disease associated with hyperinvasive strains of the ST-11 clonal complex in children], Arch Pediatr 2014 Mar;21(3):258-64.

Dacheux L, Cervantes-Gonzalez M, Guigon G, Thiberge JM, Vandenbogaert M, Maufrais C, Caro V, Bourhy H, A preliminary study of viral metagenomics of French bat species in contact with humans: identification of new mammalian viruses, PLoS ONE 2014;9(1):e87194.

Baucheron S, Monchaux I, Le Hello S, Weill FX, Cloeckaert A, Lack of efflux mediated quinolone resistance in Salmonella enterica serovars Typhi and Paratyphi A, Front Microbiol 2014;5:12.

Matheus S, Pham TB, Labeau B, Huong VT, Lacoste V, Deparis X, Marechal V, Kinetics of dengue non-structural protein 1 antigen and IgM and IgA antibodies in capillary blood samples from confirmed dengue patients, Am. J. Trop. Med. Hyg. 2014 Mar;90(3):438-43.

Féray C, Bouscaillou J, Falissard B, Mohamed MK, Arafa N, Bakr I, El-Hoseiny M, Daly ME, El-Kafrawy S, Plancoulaine S, Abdel-Hamid M, Thiers V, Fontanet A, A novel method to identify routes of hepatitis C virus transmission, PLoS ONE 2014;9(1):e86098.

Jombart T, Cori A, Didelot X, Cauchemez S, Fraser C, Ferguson N, Bayesian reconstruction of disease outbreaks by combining epidemiologic and genomic data, PLoS Comput. Biol. 2014 Jan;10(1):e1003457.

Guenin-Macé L, Oldenburg R, Chrétien F, Demangel C, Pathogenesis of skin ulcers: lessons from the Mycobacterium ulcerans and Leishmania spp. pathogens, Cell. Mol. Life Sci. 2014 Jul;71(13):2443-50.

Krebs MO, Morvan Y, Jay T, Gaillard R, Kebir O, Psychotomimetic effects at initiation of cannabis use are associated with cannabinoid receptor 1 (CNR1) variants in healthy students, Mol. Psychiatry 2014 Apr;19(4):402-3.

Penot P, Héma A, Bado G, Kaboré F, Soré I, Sombié D, Traoré JR, Guiard-Schmid JB, Fontanet A, Slama L, Bruno Sawadogo A, Laurent C, The vulnerability of men to virologic failure during antiretroviral therapy in a public routine clinic in Burkina Faso, J Int AIDS Soc 2014;17:18646.

De Maricourt P, Jay T, Goncalvès P, Lôo H, Gaillard R, [Ketamine’s antidepressant effect: literature review on clinical use], Encephale 2014 Feb;40(1):15-23.

De Maricourt P, Jay T, Goncalvès P, Lôo H, Gaillard R, [Ketamine’s antidepressant effect: focus on ketamine mechanisms of action], Encephale 2014 Feb;40(1):48-55.

Silva Ado S, Baraúna RA, de Sá PC, das Graças DA, Carneiro AR, Thouvenin M, Azevedo V, Badell E, Guiso N, da Silva AL, Ramos RT, Draft Genome Sequence of Corynebacterium ulcerans FRC58, Isolated from the Bronchitic Aspiration of a Patient in France, Genome Announc 2014 Jan;2(1).

Jones G, Le Hello S, Jourdan-da Silva N, Vaillant V, de Valk H, Weill F, Le Strat Y, The French human Salmonella surveillance system: evaluation of timeliness of laboratory reporting and factors associated with delays, 2007 to 2011, Euro Surveill. 2014 Jan;19(1).

Loison E, Gougeon ML, Thimerosal compromises human dendritic cell maturation, IL-12 production, chemokine release, and T-helper polarization, Hum Vaccin Immunother 2014;10(8):2328-35.

Lert F, Grimaldi-Bensouda L, Rouillon F, Massol J, Guillemot D, Avouac B, Duru G, Magnier AM, Rossignol M, Abenhaim L, Begaud B, , Characteristics of patients consulting their regular primary care physician according to their prescribing preferences for homeopathy and complementary medicine, Homeopathy 2014 Jan;103(1):51-7.

Lemoine M, Shimakawa Y, Njie R, Njai HF, Nayagam S, Khalil M, Goldin R, Ingiliz P, Taal M, Nyan O, Corrah T, D'Alessandro U, Thursz M, , Food intake increases liver stiffness measurements and hampers reliable values in patients with chronic hepatitis B and healthy controls: the PROLIFICA experience in The Gambia., Aliment Pharmacol Ther 2014 Jan; 39(2): 188-96.

Magpantay FM, Riolo MA, DE Cellès MD, King AA, Rohani P, EPIDEMIOLOGICAL CONSEQUENCES OF IMPERFECT VACCINES FOR IMMUNIZING INFECTIONS, SIAM J Appl Math 2014;74(6):1810-1830.

Rodrigues C, Novais Â, Machado E, Peixe L, , Detection of VIM-34, a novel VIM-1 variant identified in the intercontinental ST15 Klebsiella pneumoniae clone., J Antimicrob Chemother 2014 Jan; 69(1): 274-5.

Collard JM, Wang X, Mahamane AE, Idi I, Issaka B, Ousseni M, Mayer LW, Nato F, Moulia-Pelat JP, A five-year field assessment of rapid diagnostic tests for meningococcal meningitis in Niger by using the combination of conventional and real-time PCR assays as a gold standard., Trans R Soc Trop Med Hyg 2014 Jan; 108(1): 6-12.

Chenau J, Fenaille F, Caro V, Haustant M, Diancourt L, Klee SR, Junot C, Ezan E, Goossens PL, Becher F, Identification and validation of specific markers of Bacillus anthracis spores by proteomics and genomics approaches, Mol. Cell Proteomics 2014 Mar;13(3):716-32.

Guilhen C, Taha MK, Veyrier FJ, , Role of transition metal exporters in virulence: the example of Neisseria meningitidis., Front Cell Infect Microbiol 2013 ; 3(): 102.

Madec Y, Leroy S, Rey-Cuille MA, Huber F, Calmy A, Persistent difficulties in switching to second-line ART in sub-saharan Africa–a systematic review and meta-analysis, PLoS ONE 2013;8(12):e82724.

Wiltzer L, Okada K, Yamaoka S, Larrous F, Kuusisto HV, Sugiyama M, Blondel D, Bourhy H, Jans DA, Ito N, Moseley GW, Interaction of rabies virus P-protein with STAT proteins is critical to lethal rabies disease, J. Infect. Dis. 2014 Jun;209(11):1744-53.

Magaud E, Morvan Y, Rampazzo A, Alexandre C, Willard D, Gaillard R, Kazes M, Krebs MO, Subjects at Ultra High Risk for psychosis have ‘heterogeneous’ intellectual functioning profile: a multiple-case study, Schizophr. Res. 2014 Feb;152(2-3):415-20.

Le Hello S, Bekhit A, Granier SA, Barua H, Beutlich J, Zając M, Münch S, Sintchenko V, Bouchrif B, Fashae K, Pinsard JL, Sontag L, Fabre L, Garnier M, Guibert V, Howard P, Hendriksen RS, Christensen JP, Biswas PK, Cloeckaert A, Rabsch W, Wasyl D, Doublet B, Weill FX, The global establishment of a highly-fluoroquinolone resistant Salmonella enterica serotype Kentucky ST198 strain, Front Microbiol 2013;4:395.

Ferguson NM, Van Kerkhove MD, Identification of MERS-CoV in dromedary camels, Lancet Infect Dis 2014 Feb;14(2):93-4.

Fiole D, Deman P, Trescos Y, Mayol JF, Mathieu J, Vial JC, Douady J, Tournier JN, Two-photon intravital imaging of lungs during anthrax infection reveals long-lasting macrophage-dendritic cell contacts, Infect. Immun. 2014 Feb;82(2):864-72.

Lemaitre M, Watier L, Briand V, Garcia A, Le Hesran JY, Cot M, Coinfection with Plasmodium falciparum and Schistosoma haematobium: additional evidence of the protective effect of Schistosomiasis on malaria in Senegalese children, Am. J. Trop. Med. Hyg. 2014 Feb;90(2):329-34.

Collard JM, Issaka B, Zaneidou M, Hugonnet S, Nicolas P, Taha MK, Greenwood B, Jusot JF, Epidemiological changes in meningococcal meningitis in Niger from 2008 to 2011 and the impact of vaccination., BMC Infect Dis 2013 Dec; 13(): 576.

Dinu S, Damian M, Badell E, Dragomirescu CC, Guiso N, New diphtheria toxin repressor types depicted in a Romanian collection of Corynebacterium diphtheriae isolates, J. Basic Microbiol. 2014 Oct;54(10):1136-9.

Pons-Salort M, Thiébaut AC, Guillemot D, Favre M, Delarocque-Astagneau E, HPV genotype replacement: too early to tell, Lancet Infect Dis 2013 Dec;13(12):1012.

Simonsen L, Spreeuwenberg P, Lustig R, Taylor RJ, Fleming DM, Kroneman M, Van Kerkhove MD, Mounts AW, Paget WJ, , Global mortality estimates for the 2009 Influenza Pandemic from the GLaMOR project: a modeling study, PLoS Med. 2013 Nov;10(11):e1001558.

De Jonghe B, Sharshar T, Outin H, Prognostication of neurologic outcome after cardiac arrest: standardization of neurological examination conditions is needed, Intensive Care Med 2014 Feb;40(2):294.

Pant GR, Lavenir R, Wong FY, Certoma A, Larrous F, Bhatta DR, Bourhy H, Stevens V, Dacheux L, Recent emergence and spread of an Arctic-related phylogenetic lineage of rabies virus in Nepal, PLoS Negl Trop Dis 2013 Nov;7(11):e2560.

Heard I, Tondeur L, Arowas L, Falguières M, Demazoin MC, Favre M, Human papillomavirus types distribution in organised cervical cancer screening in France, PLoS ONE 2013;8(11):e79372.

Cauchemez S, Fraser C, Van Kerkhove MD, Donnelly CA, Riley S, Rambaut A, Enouf V, van der Werf S, Ferguson NM, Middle East respiratory syndrome coronavirus: quantification of the extent of the epidemic, surveillance biases, and transmissibility, Lancet Infect Dis 2014 Jan;14(1):50-56.

Borgella S, Fievet N, Huynh BT, Ibitokou S, Hounguevou G, Affedjou J, Sagbo JC, Houngbegnon P, Guezo-Mévo B, Massougbodji A, Luty AJ, Cot M, Deloron P, Impact of pregnancy-associated malaria on infant malaria infection in southern Benin, PLoS ONE 2013;8(11):e80624.

de la Grandmaison GL, Watier L, Cavard S, Charlier P, Are suicide rates higher in the cancer population? An investigation using forensic autopsy data, Med. Hypotheses 2014 Jan;82(1):16-9.

Fernandez C, Gazaille V, Werbrouck-Chiraux A, Belmonte O, Sultan-Bichat N, Agape P, Chretien F, Schlossmacher P, [American histoplasmosis: clinicopathological features in immunocompetent and immunocompromised patients. A report of two cases of infection by Histoplasma capsulatum on Reunion Island], Rev Mal Respir 2014 May;31(5):447-53.

Siami S, Polito A, Porcher R, Hissem T, Blanchard A, Boucly C, Carlier R, Annane D, Haymann JP, Sharshar T, Thirst perception and osmoregulation of vasopressin secretion are altered during recovery from septic shock, PLoS ONE 2013;8(11):e80190.

Cantinelli T, Chenal-Francisque V, Diancourt L, Frezal L, Leclercq A, Wirth T, Lecuit M, Brisse S, “Epidemic clones” of Listeria monocytogenes are widespread and ancient clonal groups., J Clin Microbiol 2013 Nov; 51(11): 3770-9.

Sridhar S, Begom S, Bermingham A, Hoschler K, Adamson W, Carman W, Van Kerkhove MD, Lalvani A, Incidence of influenza A(H1N1)pdm09 infection, United Kingdom, 2009-2011, Emerging Infect. Dis. 2013 Nov;19(11):1866-9.

Laureillard D, Marcy O, Madec Y, Chea S, Chan S, Borand L, Fernandez M, Prak N, Kim C, Dim B, Nerrienet E, Sok T, Delfraissy JF, Goldfeld AE, Blanc FX, , Paradoxical tuberculosis-associated immune reconstitution inflammatory syndrome after early initiation of antiretroviral therapy in a randomized clinical trial, AIDS 2013 Oct;27(16):2577-86.

Bierry G, Lefevre S, Dietemann JL, Jehl F, In vivo macrophage imaging using MR targeted contrast agent for longitudinal evaluation of septic arthritis, J Vis Exp 2013 Oct;(80):e50296.

Compain F, Poisson A, Le Hello S, Branger C, Weill FX, Arlet G, Decré D, Targeting relaxase genes for classification of the predominant plasmids in Enterobacteriaceae, Int. J. Med. Microbiol. 2014 May;304(3-4):236-42.

Vinckier F, Cohen L, Oppenheim C, Salvador A, Picard H, Amado I, Krebs MO, Gaillard R, Reading impairment in schizophrenia: dysconnectivity within the visual system, Neuropsychologia 2014 Jan;53:187-96.

Lanternier F, Pathan S, Vincent QB, Liu L, Cypowyj S, Prando C, Migaud M, Taibi L, Ammar-Khodja A, Boudghene Stambouli O, Guellil B, Jacobs F, Goffard JC, Schepers K, del Marmol V, Boussofara L, Denguezli M, Larif M, Bachelez H, Michel L, Lefranc G, Hay R, Jouvion G, Chretien F, Fraitag S, Bougnoux ME, Boudia M, Abel L, Lortholary O, Casanova JL, Picard C, Grimbacher B, Puel A, Deep dermatophytosis and inherited CARD9 deficiency, N. Engl. J. Med. 2013 Oct;369(18):1704-14.

Mongardon N, Bouglé A, Geri G, Daviaud F, Morichau-Beauchant T, Tissier R, Dumas F, Cariou A, [Pathophysiology and management of post-cardiac arrest syndrome], Ann Fr Anesth Reanim 2013 Nov;32(11):779-86.

Bernier A, Delarocque-Astagneau E, Ligier C, Vibet MA, Guillemot D, Watier L, Outpatient antibiotic use in France between 2000 and 2010: after the nationwide campaign, it is time to focus on the elderly, Antimicrob. Agents Chemother. 2014;58(1):71-7.

Sivadon-Tardy V, Porcher R, Orlikowski D, Ronco E, Gault E, Roussi J, Durand MC, Sharshar T, Annane D, Raphael JC, Megraud F, Gaillard JL, Increased incidence of Campylobacter jejuni-associated Guillain-Barré syndromes in the Greater Paris area, Epidemiol. Infect. 2014 Aug;142(8):1609-13.

Angst J, Hantouche E, Caci H, Gaillard R, Lancrenon S, Azorin JM, DSM-IV diagnosis in depressed primary care patients with previous psychiatric ICD-10 bipolar disorder, J Affect Disord 2014 Jan;152-154:295-8.

Veyrier FJ, Hong E, Deghmane AE, Taha MK, , Draft Genome Sequence of a Neisseria meningitidis Serogroup C Isolate of Sequence Type 11 Linked to an Outbreak among Men Who Have Sex with Men., Genome Announc 2013 Oct; 1(5): .

Gallien S, Taieb F, Hamane S, De Castro N, Molina JM, Autochthonous falciparum malaria possibly transmitted by luggage-carried vector in Paris, France, February 2013, Euro Surveill. 2013;18(40).

Chauvat A, Benhamouda N, Gey A, Lemoine FM, Paulie S, Carrat F, Gougeon ML, Rozenberg F, Krivine A, Cherai M, Lehmann P, Quintin-Colonna F, Launay O, Tartour E, Clinical validation of IFNγ/IL-10 and IFNγ/IL-2 FluoroSpot assays for the detection of Tr1 T cells and influenza vaccine monitoring in humans, Hum Vaccin Immunother 2014;10(1):104-13.

Thursz M, Fontanet A, HCV transmission in industrialized countries and resource-constrained areas, Nat Rev Gastroenterol Hepatol 2014 Jan;11(1):28-35.

Hoiseth SK, Murphy E, Andrew L, Vogel U, Frosch M, Hellenbrand W, Abad R, Vazquez JA, Borrow R, Findlow J, Taha MK, Deghmane AE, Caugant DA, Kriz P, Musilek M, Mayer LW, Wang X, Macneil JR, York L, Tan CY, Jansen KU, Anderson AS, , A multi-country evaluation of Neisseria meningitidis serogroup B factor H-binding proteins and implications for vaccine coverage in different age groups., Pediatr Infect Dis J 2013 Oct; 32(10): 1096-101.

Rey-Cuille MA, Njouom R, Bekondi C, Seck A, Gody C, Bata P, Garin B, Maylin S, Chartier L, Simon F, Vray M, Hepatitis B virus exposure during childhood in Cameroon, Central African Republic and Senegal after the integration of HBV vaccine in the expanded program on immunization, Pediatr. Infect. Dis. J. 2013 Oct;32(10):1110-5.

Parize P, Angebault C, de Fonbrune FS, Suarez F, Lecuit M, Lortholary O, Bougnoux ME, , Naturotherapy as a potential source of mould infections in patients with haematological malignancies., J Hosp Infect 2013 Oct; 85(2): 163-4.

Rodrigues C, Machado E, Peixe L, Novais A, , IncI1/ST3 and IncN/ST1 plasmids drive the spread of blaTEM-52 and blaCTX-M-1/-32 in diverse Escherichia coli clones from different piggeries., J Antimicrob Chemother 2013 Oct; 68(10): 2245-8.

Lemaître C, Mahjoub-Messai F, Dupont D, Caro V, Diancourt L, Bingen E, Bidet P, Bonacorsi S, A conserved virulence plasmidic region contributes to the virulence of the multiresistant Escherichia coli meningitis strain S286 belonging to phylogenetic group C, PLoS ONE 2013;8(9):e74423.

Tourdjman M, Le Hello S, Gossner C, Delmas G, Tubiana S, Fabre L, Kerléguer A, Tarantola A, Fruth A, Friesema I, Thorstensen Brandal L, Lawrence J, Fisher I, Dufour M, Weill FX, de Valk H, Unusual increase in reported cases of paratyphoid A fever among travellers returning from Cambodia, January to September 2013, Euro Surveill. 2013 Sep;18(39).

Madec Y, Boufassa F, Porter K, Prins M, Sabin C, d'Arminio Monforte A, Amornkul P, Bartmeyer B, Sannes M, Venet A, Lambotte O, Meyer L, , Natural history of HIV-control since seroconversion, AIDS 2013 Sep;27(15):2451-60.

Shigematsu S, Dublineau A, Sawoo O, Batéjat C, Matsuyama T, Leclercq I, Manuguerra JC, , Influenza A virus survival in water is influenced by the origin species of the host cell., Influenza Other Respir Viruses 2014 Jan; 8(1): 123-30.

Polito A, Eischwald F, Maho AL, Polito A, Azabou E, Annane D, Chrétien F, Stevens RD, Carlier R, Sharshar T, Pattern of brain injury in the acute setting of human septic shock, Crit Care 2013;17(5):R204.

Vermersch C, Smadja S, Amselem O, Gay O, Marcellin L, Gaillard R, Mignon A, [Cesarean section and sismotherapy in a severe psychotic parturient: A case report], Ann Fr Anesth Reanim 2013 Oct;32(10):711-4.

Cori A, Ferguson NM, Fraser C, Cauchemez S, A new framework and software to estimate time-varying reproduction numbers during epidemics, Am. J. Epidemiol. 2013 Nov;178(9):1505-12.

Taha MK, Immunisation against meningococcus B, Lancet 2013 Sep;382(9896):936.

Andriamandimby SF, Héraud JM, Ramiandrasoa R, Ratsitorahina M, Rasambainarivo JH, Dacheux L, Lepelletier A, Goodman SM, Reynes JM, Bourhy H, Surveillance and control of rabies in La Reunion, Mayotte, and Madagascar, Vet. Res. 2013 Sep;44:77.

Breban R, Doss W, Esmat G, Elsayed M, Hellard M, Ayscue P, Albert M, Fontanet A, Mohamed MK, Quantifying current hepatitis C virus incidence in Egypt – Response to letter by Miller and Abu-Raddad, J. Viral Hepat. 2013 Sep;20(9):668.

Van Kerkhove MD, Brief literature review for the WHO global influenza research agenda–highly pathogenic avian influenza H5N1 risk in humans, Influenza Other Respir Viruses 2013 Sep;7 Suppl 2:26-33.

Giraud E, Lecoeur H, Rouault E, Goyard S, Milon G, Lang T, A combined luciferase-expressing Leishmania imaging/RT-qPCR assay provides new insights into the sequential bilateral processes deployed in the ear pinna of C57BL/6 mice, Parasitol. Int. 2014 Feb;63(1):245-53.

Harrois D, Breurec S, Seck A, Delauné A, Le Hello S, Pardos de la Gándara M, Sontag L, Perrier-Gros-Claude JD, Sire JM, Garin B, Weill FX, Prevalence and characterization of extended-spectrum β-lactamase-producing clinical Salmonella enterica isolates in Dakar, Senegal, from 1999 to 2009, Clin. Microbiol. Infect. 2014 Feb;20(2):O109-16.

Larsson JT, Torpdahl M, , Møller Nielsen E, Proof-of-concept study for successful inter-laboratory comparison of MLVA results, Euro Surveill. 2013 Aug;18(35):20566.

Nadon CA, Trees E, Ng LK, Møller Nielsen E, Reimer A, Maxwell N, Kubota KA, Gerner-Smidt P, , Development and application of MLVA methods as a tool for inter-laboratory surveillance, Euro Surveill. 2013 Aug;18(35):20565.

Nouhin J, Madec Y, Ngo-Giang-Huong N, Ferradini L, Nerrienet E, Increased risk of Q151M and K65R mutations in patients failing stavudine-containing first-line antiretroviral therapy in Cambodia, PLoS ONE 2013;8(8):e73744.

Albanesi M, Mancardi DA, Jönsson F, Iannascoli B, Fiette L, Di Santo JP, Lowell CA, Bruhns P, Neutrophils mediate antibody-induced antitumor effects in mice, Blood 2013 Oct;122(18):3160-4.

Williams S, Fitzner J, Merianos A, Mounts A, , The challenges of global case reporting during pandemic A(H1N1) 2009, Bull. World Health Organ. 2014 Jan;92(1):60-7.

Péan N, Doignon I, Garcin I, Besnard A, Julien B, Liu B, Branchereau S, Spraul A, Guettier C, Humbert L, Schoonjans K, Rainteau D, Tordjmann T, The receptor TGR5 protects the liver from bile acid overload during liver regeneration in mice, Hepatology 2013 Oct;58(4):1451-60.

Martinez-Pino I, Luquero FJ, Sakoba K, Sylla S, Haile M, Grais RF, Ciglenecki I, Quilici ML, Page AL, Use of a cholera rapid diagnostic test during a mass vaccination campaign in response to an epidemic in Guinea, 2012, PLoS Negl Trop Dis 2013;7(8):e2366.

Manirakiza A, Sepou A, Serdouma E, Gondje S, Bata GG, Moussa S, Boulay A, Moyen JM, Sakanga O, Le-Fouler L, Kazanji M, Vray M, Effectiveness of two antifolate prophylactic strategies against malaria in HIV-positive pregnant women in Bangui, Central African Republic: study protocol for a randomized controlled trial (MACOMBA), Trials 2013 Aug;14:255.

Kerouanton A, Rose V, Weill FX, Granier SA, Denis M, Genetic diversity and antimicrobial resistance profiles of Salmonella enterica serotype derby isolated from pigs, pork, and humans in France, Foodborne Pathog. Dis. 2013 Nov;10(11):977-84.

Charlier P, Chaillot PF, Watier L, Ménétrier M, Carlier R, Cavard S, Hervé C, de la Grandmaison GL, Huynh-Charlier I, Is post-mortem ultrasonography a useful tool for forensic purposes?, Med Sci Law 2013 Oct;53(4):227-34.

Bernard E, Pons-Salort M, Favre M, Heard I, Delarocque-Astagneau E, Guillemot D, Thiébaut AC, Comparing human papillomavirus prevalences in women with normal cytology or invasive cervical cancer to rank genotypes according to their oncogenic potential: a meta-analysis of observational studies, BMC Infect. Dis. 2013;13:373.

Gaillard R, Gourion D, Llorca PM, [Anhedonia in depression], Encephale 2013 Sep;39(4):296-305.

Cordel H, Prendki V, Madec Y, Houze S, Paris L, Bourée P, Caumes E, Matheron S, Bouchaud O, , Imported amoebic liver abscess in France, PLoS Negl Trop Dis 2013;7(8):e2333.

Dechavanne C, Pierrat C, Renard E, Costes B, Martin N, Ladekpo R, Ahouangninou C, Alvarez VM, Huynh BT, Garcia A, Migot-Nabias F, Genetic characterization of Plasmodium falciparum allelic variants infecting mothers at delivery and their children during their first plasmodial infections, Infect. Genet. Evol. 2013 Dec;20:16-25.

Azabou E, Roche N, Sharshar T, Bussel B, Lofaso F, Petitjean M, Transcranial direct-current stimulation reduced the excitability of diaphragmatic corticospinal pathways whatever the polarity used, Respir Physiol Neurobiol 2013 Oct;189(1):183-7.

de la Grandmaison GL, Marchaut J, Watier L, Médiouni Z, Charlier P, Frequency and nature of testicular and paratesticular lesions in forensic autopsies, Med Sci Law 2013 Oct;53(4):208-12.

Zając M, Wasyl D, Hoszowski A, Le Hello S, Szulowski K, Genetic lineages of Salmonella enterica serovar Kentucky spreading in pet reptiles, Vet. Microbiol. 2013 Oct;166(3-4):686-9.

Fansiri T, Fontaine A, Diancourt L, Caro V, Thaisomboonsuk B, Richardson JH, Jarman RG, Ponlawat A, Lambrechts L, Genetic mapping of specific interactions between Aedes aegypti mosquitoes and dengue viruses, PLoS Genet. 2013;9(8):e1003621.

Sire JM, Garin B, Chartier L, Fall NK, Tall A, Seck A, Weill FX, Breurec S, Vray M, Community-acquired infectious diarrhoea in children under 5 years of age in Dakar, Senegal, Paediatr Int Child Health 2013 Aug;33(3):139-44.

, Meningococcal carriage in the African meningitis belt., Trop Med Int Health 2013 Aug; 18(8): 968-78.

Angebault C, Djossou F, Abélanet S, Permal E, Ben Soltana M, Diancourt L, Bouchier C, Woerther PL, Catzeflis F, Andremont A, d'Enfert C, Bougnoux ME, Candida albicans is not always the preferential yeast colonizing humans: a study in Wayampi Amerindians, J. Infect. Dis. 2013 Nov;208(10):1705-16.

Baucheron S, Le Hello S, Doublet B, Giraud E, Weill FX, Cloeckaert A, ramR mutations affecting fluoroquinolone susceptibility in epidemic multidrug-resistant Salmonella enterica serovar Kentucky ST198, Front Microbiol 2013;4:213.

Movert E, Wu Y, Lambeau G, Kahn F, Touqui L, Areschoug T, Secreted group IIA phospholipase A2 protects humans against the group B streptococcus: experimental and clinical evidence, J. Infect. Dis. 2013 Dec;208(12):2025-35.

Goyard S, Dutra PL, Deolindo P, Autheman D, D'Archivio S, Minoprio P, In vivo imaging of trypanosomes for a better assessment of host-parasite relationships and drug efficacy, Parasitol. Int. 2014 Feb;63(1):260-8.

Virgone-Carlotta A, Uhlrich J, Akram MN, Ressnikoff D, Chrétien F, Domenget C, Gherardi R, Despars G, Jurdic P, Honnorat J, Nataf S, Touret M, Mapping and kinetics of microglia/neuron cell-to-cell contacts in the 6-OHDA murine model of Parkinson’s disease, Glia 2013 Oct;61(10):1645-58.

Bernier A, Ligier C, Guillemot D, Watier L, Did media attention of the 2009 A(H1N1) influenza epidemic increase outpatient antibiotic use in France?: A time-series analysis, PLoS ONE 2013;8(7):e69075.

Shimakawa Y, Yan HJ, Tsuchiya N, Bottomley C, Hall AJ, , Association of early age at establishment of chronic hepatitis B infection with persistent viral replication, liver cirrhosis and hepatocellular carcinoma: a systematic review., PLoS One 2013 ; 8(7): e69430.

Delbos V, Lemée L, Bénichou J, Berthelot G, Deghmane AE, Leroy JP, Houivet E, Hong E, Taha MK, Caron F, , Impact of MenBvac, an outer membrane vesicle (OMV) vaccine, on the meningococcal carriage, Vaccine 2013 Sep;31(40):4416-20.

Breban R, Riou J, Fontanet A, Interhuman transmissibility of Middle East respiratory syndrome coronavirus: estimation of pandemic risk, Lancet 2013 Aug;382(9893):694-9.

Oukani H, Pellegrini-Moïse N, Jackowski O, Chrétien F, Chapleur Y, The 1,3-dipolar cycloaddition reaction of chiral carbohydrate-derived nitrone and olefin: towards long-chain sugars, Carbohydr. Res. 2013 Nov;381:205-14.

Njanpop-Lafourcade BM, Hugonnet S, Djogbe H, Kodjo A, N'douba AK, Taha MK, Stoeckel P, Gessner BD, Mobile microbiological laboratory support for evaluation of a meningitis epidemic in Northern Benin, PLoS ONE 2013;8(7):e68401.

Terrade A, Collard JM, Nato F, Taha MK, Laboratory evaluation of a rapid diagnostic test for Neisseria meningitidis serogroup A., Trans R Soc Trop Med Hyg 2013 Jul; 107(7): 460-1.

Gambhir M, Swerdlow DL, Finelli L, Van Kerkhove MD, Biggerstaff M, Cauchemez S, Ferguson NM, Multiple contributory factors to the age distribution of disease cases: a modeling study in the context of influenza A(H3N2v), Clin. Infect. Dis. 2013 Jul;57 Suppl 1:S23-7.

Gaschignard J, Levy C, Deghmane AE, Dubos F, Muszlak M, Cohen R, Bingen E, Faye A, Taha MK, Invasive serogroup w meningococcal disease in children: a national survey from 2001 to 2008 in France, Pediatr. Infect. Dis. J. 2013 Jul;32(7):798-800.

Berger F, Desplanches N, Baillargeaux S, Joubert M, Miller M, Ribadeau-Dumas F, Spiegel A, Bourhy H, Rabies Risk: Difficulties Encountered during Management of Grouped Cases of Bat Bites in 2 Isolated Villages in French Guiana, PLoS Negl Trop Dis 2013 Jun;7(6):e2258.

Vanhomwegen J, Berthet N, Mazuet C, Guigon G, Vallaeys T, Stamboliyska R, Dubois P, Kennedy GC, Cole ST, Caro V, Manuguerra JC, Popoff MR, Application of high-density DNA resequencing microarray for detection and characterization of botulinum neurotoxin-producing clostridia, PLoS ONE 2013;8(6):e67510.

Opatowski L, Varon E, Dupont C, Temime L, van der Werf S, Gutmann L, Boëlle PY, Watier L, Guillemot D, Assessing pneumococcal meningitis association with viral respiratory infections and antibiotics: insights from statistical and mathematical models, Proc. Biol. Sci. 2013 Aug;280(1764):20130519.

Gerin C, Pallud J, Deroulers C, Varlet P, Oppenheim C, Roux FX, Chrétien F, Thomas SR, Grammaticos B, Badoual M, Quantitative characterization of the imaging limits of diffuse low-grade oligodendrogliomas, Neuro-oncology 2013 Oct;15(10):1379-88.

Lecoeur H, Giraud E, Prévost MC, Milon G, Lang T, Reprogramming neutral lipid metabolism in mouse dendritic leucocytes hosting live Leishmania amazonensis amastigotes, PLoS Negl Trop Dis 2013;7(6):e2276.

Le Coupanec A, Babin D, Fiette L, Jouvion G, Ave P, Misse D, Bouloy M, Choumet V, Aedes mosquito saliva modulates Rift Valley fever virus pathogenicity, PLoS Negl Trop Dis 2013;7(6):e2237.

El Baidouri F, Diancourt L, Berry V, Chevenet F, Pratlong F, Marty P, Ravel C, Genetic structure and evolution of the Leishmania genus in Africa and Eurasia: what does MLSA tell us, PLoS Negl Trop Dis 2013;7(6):e2255.

Cauchemez S, Van Kerkhove MD, Riley S, Donnelly CA, Fraser C, Ferguson NM, Transmission scenarios for Middle East Respiratory Syndrome Coronavirus (MERS-CoV) and how to tell them apart, Euro Surveill. 2013;18(24).

Zarantonelli ML, Skoczynska A, Antignac A, El Ghachi M, Deghmane AE, Szatanik M, Mulet C, Werts C, Peduto L, d'Andon MF, Thouron F, Nato F, Lebourhis L, Philpott DJ, Girardin SE, Vives FL, Sansonetti P, Eberl G, Pedron T, Taha MK, Boneca IG, , Penicillin resistance compromises Nod1-dependent proinflammatory activity and virulence fitness of neisseria meningitidis., Cell Host Microbe 2013 Jun; 13(6): 735-45.

Lajous M, Tondeur L, Fagherazzi G, de Lauzon-Guillain B, Boutron-Ruaualt MC, Clavel-Chapelon F, Childhood and adult secondhand smoke and type 2 diabetes in women, Diabetes Care 2013 Sep;36(9):2720-5.

Rahman MZ, Akter S, Azmuda N, Sultana M, Weill FX, Khan SI, Grimont PA, Birkeland NK, Serological cross-reaction between O-antigens of Shigella dysenteriae type 4 and an environmental Escherichia albertii isolate, Curr. Microbiol. 2013 Nov;67(5):590-5.

Delbos V, Lemée L, Bénichou J, Berthelot G, Taha MK, Caron F, , Meningococcal carriage during a clonal meningococcal B outbreak in France, Eur. J. Clin. Microbiol. Infect. Dis. 2013 Nov;32(11):1451-9.

Chenal-Francisque V, Diancourt L, Cantinelli T, Passet V, Tran-Hykes C, Bracq-Dieye H, Leclercq A, Pourcel C, Lecuit M, Brisse S, , Optimized Multilocus variable-number tandem-repeat analysis assay and its complementarity with pulsed-field gel electrophoresis and multilocus sequence typing for Listeria monocytogenes clone identification and surveillance., J Clin Microbiol 2013 Jun; 51(6): 1868-80.

Taha MK, Kacou-N'douba A, Hong E, Deghmane AE, Giorgini D, Okpo SL, Kangah T, Dosso M, Travel-related Neisseria meningitidis serogroup W135 infection, France, Emerging Infect. Dis. 2013 Jun;19(6):1030-2.

Guery B, Poissy J, el Mansouf L, Séjourné C, Ettahar N, Lemaire X, Vuotto F, Goffard A, Behillil S, Enouf V, Caro V, Mailles A, Che D, Manuguerra JC, Mathieu D, Fontanet A, van der Werf S, , Clinical features and viral diagnosis of two cases of infection with Middle East Respiratory Syndrome coronavirus: a report of nosocomial transmission, Lancet 2013 Jun;381(9885):2265-72.

Sonneville R, Verdonk F, Rauturier C, Klein IF, Wolff M, Annane D, Chretien F, Sharshar T, Understanding brain dysfunction in sepsis, Ann Intensive Care 2013;3(1):15.

Le Hello S, Harrois D, Bouchrif B, Sontag L, Elhani D, Guibert V, Zerouali K, Weill FX, Highly drug-resistant Salmonella enterica serotype Kentucky ST198-X1: a microbiological study, Lancet Infect Dis 2013 Aug;13(8):672-9.

Frank T, Gody JC, Nguyen LB, Berthet N, Le Fleche-Mateos A, Bata P, Rafaï C, Kazanji M, Breurec S, First case of Elizabethkingia anophelis meningitis in the Central African Republic., Lancet 2013 May; 381(9880): 1876.

Peyrefitte CN, Grandadam M, Bessaud M, Andry PE, Fouque F, Caro V, Diancourt L, Schuffenecker I, Pagès F, Tolou H, Zeller H, Depaquit J, Diversity of Phlebotomus perniciosus in Provence, southeastern France: Detection of two putative new phlebovirus sequences, Vector Borne Zoonotic Dis. 2013 Sep;13(9):630-6.

Argemi X, Hansmann Y, Christmann D, Lefebvre S, Jaulhac B, Jehl F, In vitro activity of daptomycin against Enterococcus faecalis under various conditions of growth-phases, inoculum and pH, PLoS ONE 2013;8(5):e64218.

Jusot JF, Tohon Z, Yazi AA, Collard JM, Significant sequelae after bacterial meningitis in Niger: a cohort study., BMC Infect Dis 2013 May; 13(): 228.

Serra-Cobo J, López-Roig M, Seguí M, Sánchez LP, Nadal J, Borrás M, Lavenir R, Bourhy H, Ecological factors associated with European bat lyssavirus seroprevalence in spanish bats, PLoS ONE 2013;8(5):e64467.

Ragab D, Laird M, Duffy D, Casrouge A, Mamdouh R, Abass A, Shenawy DE, Shebl AM, Elkashef WF, Zalata KR, Kamal M, Esmat G, Bonnard P, Fontanet A, Rafik M, Albert ML, CXCL10 antagonism and plasma sDPPIV correlate with increasing liver disease in chronic HCV genotype 4 infected patients, Cytokine 2013 Aug;63(2):105-12.

Toubiana J, Heilbronner C, Gitiaux C, Oualha M, Taha MK, Rousseau C, Picard C, Mira JP, Gendrel D, Pachymeningitis after meningococcal infection, Lancet 2013 May;381(9877):1596.

Bozza FA, D'Avila JC, Ritter C, Sonneville R, Sharshar T, Dal-Pizzol F, Bioenergetics, mitochondrial dysfunction, and oxidative stress in the pathophysiology of septic encephalopathy, Shock 2013 May;39 Suppl 1:10-6.

Besnard A, Julien B, Gonzales E, Tordjmann T, Innate immunity, purinergic system, and liver regeneration: a trip in complexity, Hepatology 2013 May;57(5):1688-90.

Domenech de Cellès M, Zahar JR, Abadie V, Guillemot D, Limits of patient isolation measures to control extended-spectrum beta-lactamase-producing Enterobacteriaceae: model-based analysis of clinical data in a pediatric ward, BMC Infect. Dis. 2013 Apr;13:187.

Biondi O, Villemeur M, Marchand A, Chretien F, Bourg N, Gherardi RK, Richard I, Authier FJ, Dual effects of exercise in dysferlinopathy, Am. J. Pathol. 2013 Jun;182(6):2298-309.

Assayag O, Grieve K, Devaux B, Harms F, Pallud J, Chretien F, Boccara C, Varlet P, Imaging of non-tumorous and tumorous human brain tissues with full-field optical coherence tomography, Neuroimage Clin 2013;2:549-57.

Joffret ML, Bouchier C, Grandadam M, Zeller H, Maufrais C, Bourhy H, Despres P, Delpeyroux F, Dacheux L, Genomic characterization of Sebokele virus 1 (SEBV1) reveals a new candidate species among the genus Parechovirus, J. Gen. Virol. 2013 Jul;94(Pt 7):1547-53.

Berneman A, Montout L, Goyard S, Chamond N, Cosson A, d'Archivio S, Gouault N, Uriac P, Blondel A, Minoprio P, Combined approaches for drug design points the way to novel proline racemase inhibitor candidates to fight Chagas’ disease, PLoS ONE 2013;8(4):e60955.

Galiger C, Brock M, Jouvion G, Savers A, Parlato M, Ibrahim-Granet O, Assessment of efficacy of antifungals against Aspergillus fumigatus: value of real-time bioluminescence imaging, Antimicrob. Agents Chemother. 2013 Jul;57(7):3046-59.

Mahamat A, Dussart P, Bouix A, Carvalho L, Eltges F, Matheus S, Miller MA, Quenel P, Viboud C, Climatic drivers of seasonal influenza epidemics in French Guiana, 2006-2010, J. Infect. 2013 Aug;67(2):141-7.

Adam N, Magalhaes E, Sharshar T, Continuous electroencephalogram monitoring in the ICU or how to bring the inflation under control, Crit. Care Med. 2013 Apr;41(4):1162-3.

Storms AD, Van Kerkhove MD, Azziz-Baumgartner E, Lee WK, Widdowson MA, Ferguson NM, Mounts AW, Worldwide transmission and seasonal variation of pandemic influenza A(H1N1)2009 virus activity during the 2009-2010 pandemic, Influenza Other Respir Viruses 2013 Nov;7(6):1328-35.

Martin C, Coolen N, Wu Y, Thévenot G, Touqui L, Prulière-Escabasse V, Papon JF, Coste A, Escudier E, Dusser DJ, Fajac I, Burgel PR, CFTR dysfunction induces vascular endothelial growth factor synthesis in airway epithelium, Eur. Respir. J. 2013 Dec;42(6):1553-62.

Vega-Rua A, Zouache K, Caro V, Diancourt L, Delaunay P, Grandadam M, Failloux AB, High efficiency of temperate Aedes albopictus to transmit chikungunya and dengue viruses in the Southeast of France, PLoS ONE 2013;8(3):e59716.

Guenin-Macé L, Veyron-Churlet R, Thoulouze MI, Romet-Lemonne G, Hong H, Leadlay PF, Danckaert A, Ruf MT, Mostowy S, Zurzolo C, Bousso P, Chrétien F, Carlier MF, Demangel C, Mycolactone activation of Wiskott-Aldrich syndrome proteins underpins Buruli ulcer formation, J. Clin. Invest. 2013 Apr;123(4):1501-12.

Bourhy P, Vray M, Picardeau M, Evaluation of an in-house ELISA using the intermediate species Leptospira fainei for diagnosis of leptospirosis, J. Med. Microbiol. 2013 Jun;62(Pt 6):822-7.

Cauchemez S, Epperson S, Biggerstaff M, Swerdlow D, Finelli L, Ferguson NM, Using routine surveillance data to estimate the epidemic potential of emerging zoonoses: application to the emergence of US swine origin influenza A H3N2v virus, PLoS Med. 2013;10(3):e1001399.

Prada N, Antoni G, Commo F, Rusakiewicz S, Semeraro M, Boufassa F, Lambotte O, Meyer L, Gougeon ML, Zitvogel L, Analysis of NKp30/NCR3 isoforms in untreated HIV-1-infected patients from the ANRS SEROCO cohort, Oncoimmunology 2013 Mar;2(3):e23472.

Leymarie O, Jouvion G, Hervé PL, Chevalier C, Lorin V, Lecardonnel J, Da Costa B, Delmas B, Escriou N, Le Goffic R, Kinetic characterization of PB1-F2-mediated immunopathology during highly pathogenic avian H5N1 influenza virus infection, PLoS ONE 2013;8(3):e57894.

Madhi F, Levy C, Deghmane AE, Béchet S, Cohen R, Taha MK, , , Corticosteroid therapy in genotype ST-11 meningococcal infections, Pediatr. Infect. Dis. J. 2013 Mar;32(3):291-3.

Altmann D, Aseffa A, Bash M, Basta N, Borrow R, Broome C, Caugant D, Clark T, Collard JM, Djingarey M, Goldblatt D, Greenwood B, Griffiths U, Hajjeh R, Hassan-King M, Hugonnet S, Kimball AM, LaForce M, MacLennan C, Maiden MC, Manigart O, Mayer L, Messonnier N, Moisi J, Moore K, Moto DD, Mueller J, Nascimento M, Obaro S, Ouedraogo R, Page AL, Perea W, Pluschke G, Preziosi MP, Sow S, Stephens D, Stuart J, Thomson M, Tiendrebeogo S, Trape JF, Vernet G, Priorities for research on meningococcal disease and the impact of serogroup A vaccination in the African meningitis belt., Vaccine 2013 Mar; 31(11): 1453-7.

Munier A, Marzouk D, Abravanel F, El-Daly M, Taylor S, Mamdouh R, Eldin WS, El-Arab HE, Sos DG, Momen M, Okasha O, Le Fouler L, El-Hosini M, Izopet J, Rafik M, Albert M, Abdel-Hamid M, Mohamed MK, Delarocque-Astagneau E, Fontanet A, Frequent transient hepatitis C viremia without seroconversion among healthcare workers in Cairo, Egypt, PLoS ONE 2013;8(2):e57835.

David JM, Sanders P, Bemrah N, Granier SA, Denis M, Weill FX, Guillemot D, Watier L, Attribution of the French human Salmonellosis cases to the main food-sources according to the type of surveillance data, Prev. Vet. Med. 2013 May;110(1):12-27.

Delaune D, Andriamanantena D, Mérens A, Viant E, Aoun O, Ceppa F, Taha MK, Rapp C, Management of a rifampicin-resistant meningococcal infection in a teenager, Infection 2013 Jun;41(3):705-8.

Barral M, Soyer P, Ben Hassen W, Gayat E, Aout M, Chiaradia M, Rahmouni A, Luciani A, Diffusion-weighted MR imaging of the normal pancreas: reproducibility and variations of apparent diffusion coefficient measurement at 1.5- and 3.0-Tesla, Diagn Interv Imaging 2013 Apr;94(4):418-27.

Vogel U, Taha MK, Vazquez JA, Findlow J, Claus H, Stefanelli P, Caugant DA, Kriz P, Abad R, Bambini S, Carannante A, Deghmane AE, Fazio C, Frosch M, Frosi G, Gilchrist S, Giuliani MM, Hong E, Ledroit M, Lovaglio PG, Lucidarme J, Musilek M, Muzzi A, Oksnes J, Rigat F, Orlandi L, Stella M, Thompson D, Pizza M, Rappuoli R, Serruto D, Comanducci M, Boccadifuoco G, Donnelly JJ, Medini D, Borrow R, Predicted strain coverage of a meningococcal multicomponent vaccine (4CMenB) in Europe: a qualitative and quantitative assessment, Lancet Infect Dis 2013 May;13(5):416-25.

Nardi O, Polito A, Aboab J, Colin G, Maxime V, Clair B, Friedman D, Orlikowski D, Sharshar T, Annane D, StO₂ guided early resuscitation in subjects with severe sepsis or septic shock: a pilot randomised trial, J Clin Monit Comput 2013 Jun;27(3):215-21.

Veyrier FJ, Williams AH, Mesnage S, Schmitt C, Taha MK, Boneca IG, , De-O-acetylation of peptidoglycan regulates glycan chain extension and affects in vivo survival of Neisseria meningitidis., Mol Microbiol 2013 Mar; 87(5): 1100-12.

Bouscaillou J, Komas N, Tricou V, Nakouné E, Sélékon B, Fontanet A, Kazanji M, Imported hepatitis e virus, central african republic, 2011, Emerging Infect. Dis. 2013 Feb;19(2):335-7.

Adam N, Kandelman S, Mantz J, Chrétien F, Sharshar T, Sepsis-induced brain dysfunction, Expert Rev Anti Infect Ther 2013 Feb;11(2):211-21.

Shimakawa Y, Bah E, Wild CP, Hall AJ, , Evaluation of data quality at the Gambia national cancer registry., Int J Cancer 2013 Feb; 132(3): 658-65.

Hong E, Thulin Hedberg S, Abad R, Fazio C, Enríquez R, Deghmane AE, Jolley KA, Stefanelli P, Unemo M, Vazquez JA, Veyrier FJ, Taha MK, , Target gene sequencing to define the susceptibility of Neisseria meningitidis to ciprofloxacin., Antimicrob Agents Chemother 2013 Apr; 57(4): 1961-4.

Ribadeau-Dumas F, Dacheux L, Bourhy H, [Rabies], Med Sci (Paris) 2013 Jan;29(1):47-55.

Lindstedt BA, Torpdahl M, Vergnaud G, Le Hello S, Weill FX, Tietze E, Malorny B, Prendergast DM, Ní Ghallchoir E, Lista RF, Schouls LM, Söderlund R, Börjesson S, Åkerström S, Use of multilocus variable-number tandem repeat analysis (MLVA) in eight European countries, 2012, Euro Surveill. 2013 Jan;18(4):20385.

Hanna M, Minga A, Fao P, Borand L, Diouf A, Mben JM, Gad RR, Anglaret X, Bazin B, Chene G, , Development of a checklist of quality indicators for clinical trials in resource-limited countries: the French National Agency for Research on AIDS and Viral Hepatitis (ANRS) experience, Clin Trials 2013 Apr;10(2):300-18.

Grad YH, Godfrey P, Cerquiera GC, Mariani-Kurkdjian P, Gouali M, Bingen E, Shea TP, Haas BJ, Griggs A, Young S, Zeng Q, Lipsitch M, Waldor MK, Weill FX, Wortman JR, Hanage WP, Comparative genomics of recent Shiga toxin-producing Escherichia coli O104:H4: short-term evolution of an emerging pathogen, MBio 2013;4(1):e00452-12.

Van Kerkhove MD, Hirve S, Koukounari A, Mounts AW, , Estimating age-specific cumulative incidence for the 2009 influenza pandemic: a meta-analysis of A(H1N1)pdm09 serological studies from 19 countries, Influenza Other Respir Viruses 2013 Sep;7(5):872-86.

Stocchetti N, Le Roux P, Vespa P, Oddo M, Citerio G, Andrews PJ, Stevens RD, Sharshar T, Taccone FS, Vincent JL, Clinical review: neuromonitoring – an update, Crit Care 2013;17(1):201.

Bouglé A, Harrois A, Duranteau J, Resuscitative strategies in traumatic hemorrhagic shock, Ann Intensive Care 2013;3(1):1.

Zaki H, Sentissi O, Olié JP, Lôo H, Mouaffak F, Gaillard R, [The interest of maintenance electroconvulsive therapy in mood disorders], Encephale 2013 Oct;39(5):367-73.

Supply P, Marceau M, Mangenot S, Roche D, Rouanet C, Khanna V, Majlessi L, Criscuolo A, Tap J, Pawlik A, Fiette L, Orgeur M, Fabre M, Parmentier C, Frigui W, Simeone R, Boritsch EC, Debrie AS, Willery E, Walker D, Quail MA, Ma L, Bouchier C, Salvignol G, Sayes F, Cascioferro A, Seemann T, Barbe V, Locht C, Gutierrez MC, Leclerc C, Bentley SD, Stinear TP, Brisse S, Médigue C, Parkhill J, Cruveiller S, Brosch R, Genomic analysis of smooth tubercle bacilli provides insights into ancestry and pathoadaptation of Mycobacterium tuberculosis, Nat. Genet. 2013 Feb;45(2):172-9.

D'Archivio S, Cosson A, Medina M, Lang T, Minoprio P, Goyard S, Non-invasive in vivo study of the Trypanosoma vivax infectious process consolidates the brain commitment in late infections, PLoS Negl Trop Dis 2013;7(1):e1976.

Gouali M, Ruckly C, Carle I, Lejay-Collin M, Weill FX, Evaluation of CHROMagar STEC and STEC O104 chromogenic agar media for detection of Shiga Toxin-producing Escherichia coli in stool specimens, J. Clin. Microbiol. 2013 Mar;51(3):894-900.

Herrant M, Loucoubar C, Bassène H, Gonçalves B, Boufkhed S, Diene Sarr F, Fontanet A, Tall A, Baril L, Mercereau-Puijalon O, Mécheri S, Sakuntabhai A, Paul R, , Asthma and atopic dermatitis are associated with increased risk of clinical Plasmodium falciparum malaria., BMJ Open 2013 ; 3(7): .

Schilte C, Staikowsky F, Couderc T, Madec Y, Carpentier F, Kassab S, Albert ML, Lecuit M, Michault A, , Chikungunya virus-associated long-term arthralgia: a 36-month prospective longitudinal study., PLoS Negl Trop Dis 2013 ; 7(3): e2137.

Charrin S, Latil M, Soave S, Polesskaya A, Chrétien F, Boucheix C, Rubinstein E, Normal muscle regeneration requires tight control of muscle cell fusion by tetraspanins CD9 and CD81, Nat Commun 2013;4:1674.

Basta NE, Stuart JM, Nascimento MC, Manigart O, Trotter C, Hassan-King M, Chandramohan D, Sow SO, Berthe A, Bedru A, Tekletsion YK, Collard JM, Jusot JF, Diallo A, Basséne H, Daugla DM, Gamougam K, Hodgson A, Forgor AA, Omotara BA, Gadzama GB, Watkins ER, Rebbetts LS, Diallo K, Weiss NS, Halloran ME, Maiden MC, Greenwood B, Methods for identifying Neisseria meningitidis carriers: a multi-center study in the African meningitis belt., PLoS One 2013 ; 8(10): e78336.

Shirreff G, Alizon S, Cori A, Günthard HF, Laeyendecker O, van Sighem A, Bezemer D, Fraser C, How effectively can HIV phylogenies be used to measure heritability?, Evol Med Public Health 2013 Jan; 2013(1): 209-24.

Collard JM, Alio Sanda AK, Jusot JF, Determination of pneumococcal serotypes in meningitis cases in Niger, 2003-2011., PLoS One 2013 ; 8(3): e60432.

Roddy P, Howard N, Van Kerkhove MD, Lutwama J, Wamala J, Yoti Z, Colebunders R, Palma PP, Sterk E, Jeffs B, Van Herp M, Borchert M, Clinical manifestations and case management of Ebola haemorrhagic fever caused by a newly identified virus strain, Bundibugyo, Uganda, 2007-2008, PLoS ONE 2012;7(12):e52986.

Van Kerkhove MD, Broberg E, Engelhardt OG, Wood J, Nicoll A, , The consortium for the standardization of influenza seroepidemiology (CONSISE): a global partnership to standardize influenza seroepidemiology and develop influenza investigation protocols to inform public health policy, Influenza Other Respir Viruses 2013 May;7(3):231-4.

Grad YH, Lipsitch M, Griggs AD, Haas BJ, Shea TP, McCowan C, Montmayeur A, FitzGerald M, Wortman JR, Krogfelt KA, Bingen E, Weill FX, Tietze E, Flieger A, Lander ES, Nusbaum C, Birren BW, Hung DT, Hanage WP, Reply to Guy et al.: Support for a bottleneck in the 2011 Escherichia coli O104:H4 outbreak in Germany, Proc. Natl. Acad. Sci. U.S.A. 2012 Dec;109(52):E3629-30.

Mechergui A, Achour W, Giorgini D, Baaboura R, Taha MK, Hassen AB, Molecular typing of Neisseria perflava clinical isolates, APMIS 2013 Sep;121(9):843-7.

Hong E, Giuliani MM, Deghmane AE, Comanducci M, Brunelli B, Dull P, Pizza M, Taha MK, , Could the multicomponent meningococcal serogroup B vaccine (4CMenB) control Neisseria meningitidis capsular group X outbreaks in Africa?, Vaccine 2013 Feb; 31(7): 1113-6.

Heraud JM, Njouom R, Rousset D, Kadjo H, Caro V, Ndiaye MN, Victoir K, Collard JM, Orelle A, Yekwa EL, Ekaza E, Razanajatovo NH, Adamou L, Biscornet L, Enouf V, van der Werf S, Diop OM, Spatiotemporal circulation of influenza viruses in 5 African countries during 2008-2009: a collaborative study of the Institut Pasteur International Network., J Infect Dis 2012 Dec; 206 Suppl 1(Suppl 1): S5-13.

Gallego-Escuredo JM, Domingo P, Gutiérrez Mdel M, Mateo MG, Cabeza MC, Fontanet A, Vidal F, Domingo JC, Giralt M, Villarroya F, Reduced levels of serum FGF19 and impaired expression of receptors for endocrine FGFs in adipose tissue from HIV-infected patients, J. Acquir. Immune Defic. Syndr. 2012 Dec;61(5):527-34.

Luco S, Delmas O, Vidalain PO, Tangy F, Weil R, Bourhy H, RelAp43, a member of the NF-κB family involved in innate immune response against Lyssavirus infection, PLoS Pathog. 2012;8(12):e1003060.

Pons-Salort M, Letort V, Favre M, Heard I, Dervaux B, Opatowski L, Guillemot D, Exploring individual HPV coinfections is essential to predict HPV-vaccination impact on genotype distribution: a model-based approach, Vaccine 2013 Feb;31(8):1238-45.

Cauchemez S, Horby P, Fox A, Mai le Q, Thanh le T, Thai PQ, Hoa le NM, Hien NT, Ferguson NM, Influenza infection rates, measurement errors and the interpretation of paired serology, PLoS Pathog. 2012;8(12):e1003061.

Borand L, Laureillard D, Madec Y, Chou M, Pheng P, Marcy O, Sok T, Goldfeld AE, Taburet AM, Blanc FX, , Plasma concentrations of efavirenz with a 600 mg standard dose in Cambodian HIV-infected adults treated for tuberculosis with a body weight above 50 kg, Antivir. Ther. (Lond.) 2013;18(3):419-23.

Gouali M, Weill FX, [Enterohemorragic Escherichia coli (EHEC): topical enterobacteriaceae], Presse Med 2013 Jan;42(1):68-75.

Parize P, Rammaert B, Lortholary O, Emerging invasive fungal diseases in transplantation, Curr Infect Dis Rep 2012 Dec;14(6):668-75.

Hopkinson NS, Polkey MI, Sharshar T, Motor cortex activation in chronic obstructive pulmonary disease, Am. J. Respir. Crit. Care Med. 2012 Dec;186(11):1192; author reply 1192-3.

Gaillard R, [Depression and functional cerebral imaging], Encephale 2012 Dec;38 Suppl 2:S37-40.

Bouglé A, Max A, Mongardon N, Grimaldi D, Pène F, Rousseau C, Chiche JD, Bedos JP, Vicaut E, Mira JP, Protective effects of FCGR2A polymorphism in invasive pneumococcal diseases, Chest 2012 Dec;142(6):1474-81.

Grimaldi-Bensouda L, Engel P, Massol J, Guillemot D, Avouac B, Duru G, Lert F, Magnier AM, Rossignol M, Rouillon F, Abenhaim L, Begaud B, , Who seeks primary care for sleep, anxiety and depressive disorders from physicians prescribing homeopathic and other complementary medicine? Results from the EPI3 population survey, BMJ Open 2012;2(6).

Corre JP, Piris-Gimenez A, Moya-Nilges M, Jouvion G, Fouet A, Glomski IJ, Mock M, Sirard JC, Goossens PL, In vivo germination of Bacillus anthracis spores during murine cutaneous infection, J. Infect. Dis. 2013 Feb;207(3):450-7.

Mathias Vandenbogaert, Veronique Hourdel, Olivia Jardin-Mathé, Jean Bigeard, Ludovic Bonhomme, Véronique Legros, Heribert Hirt, Benno Schwikowski, Delphine Pflieger, Automated Phosphopeptide Identification Using Multiple MS/MS Fragmentation Modes, Journal of Proteome Research, 2012, 11 (12), pp.5695 - 5703. ⟨10.1021/pr300507j⟩.

Mueller JE, Conjugate vaccine introduction in the African meningitis belt: meeting surveillance objectives, Trop. Med. Int. Health 2013 Jan;18(1):58-64.

Paireau J, Tuan NH, Lefrançois R, Buckwalter MR, Nghia ND, Hien NT, Lortholary O, Poirée S, Manuguerra JC, Gessain A, Albert ML, Brey PT, Nga PT, Fontanet A, Litchi-associated acute encephalitis in children, Northern Vietnam, 2004-2009, Emerging Infect. Dis. 2012 Nov;18(11):1817-24.

Novais A, Rodrigues C, Branquinho R, Antunes P, Grosso F, Boaventura L, Ribeiro G, Peixe L, , Spread of an OmpK36-modified ST15 Klebsiella pneumoniae variant during an outbreak involving multiple carbapenem-resistant Enterobacteriaceae species and clones., Eur J Clin Microbiol Infect Dis 2012 Nov; 31(11): 3057-63.

Sangal V, Holt KE, Yuan J, Brown DJ, Filliol-Toutain I, Weill FX, Kim DW, da Silveira WD, Pickard D, Thomson NR, Parkhill J, Yu J, Global phylogeny of Shigella sonnei strains from limited single nucleotide polymorphisms (SNPs) and development of a rapid and cost-effective SNP-typing scheme for strain identification by high-resolution melting analysis, J. Clin. Microbiol. 2013 Jan;51(1):303-5.

Hong E, Giorgini D, Deghmane AE, Taha MK, , Functional impacts of the diversity of the meningococcal factor H binding protein., Vaccine 2012 Dec; 31(1): 183-9.

Briand V, Dumont A, Abrahamowicz M, Traore M, Watier L, Fournier P, Individual and institutional determinants of caesarean section in referral hospitals in Senegal and Mali: a cross-sectional epidemiological survey, BMC Pregnancy Childbirth 2012 Oct;12:114.

Ouédraogo S, Bodeau-Livinec F, Briand V, Huynh BT, Koura GK, Accrombessi MM, Fievet N, Massougbodji A, Deloron P, Cot M, Malaria and gravidity interact to modify maternal haemoglobin concentrations during pregnancy, Malar. J. 2012 Oct;11:348.

Vedrenne V, Gowher A, De Lonlay P, Nitschke P, Serre V, Boddaert N, Altuzarra C, Mager-Heckel AM, Chretien F, Entelis N, Munnich A, Tarassov I, Rötig A, Mutation in PNPT1, which encodes a polyribonucleotide nucleotidyltransferase, impairs RNA import into mitochondria and causes respiratory-chain deficiency, Am. J. Hum. Genet. 2012 Nov;91(5):912-8.

Briand V, Dumont A, Abrahamowicz M, Sow A, Traore M, Rozenberg P, Watier L, Fournier P, Maternal and perinatal outcomes by mode of delivery in senegal and mali: a cross-sectional epidemiological survey, PLoS ONE 2012;7(10):e47352.

Haase JK, Brown DJ, Weill FX, Mather H, Foster G, Brisse S, Wain J, Achtman M, Population genetic structure of 4,12:a:- Salmonella enterica strains from harbor porpoises, Appl. Environ. Microbiol. 2012 Dec;78(24):8829-33.

Raguenaud ME, Le Hello S, Salah S, Weill FX, Brisabois A, Delmas G, Germonneau P, Epidemiological and microbiological investigation of a large outbreak of monophasic Salmonella Typhimurium 4,5,12:i:- in schools associated with imported beef in Poitiers, France, October 2010, Euro Surveill. 2012 Oct;17(40):20289.

Rueda P, Richart A, Récalde A, Gasse P, Vilar J, Guérin C, Lortat-Jacob H, Vieira P, Baleux F, Chretien F, Arenzana-Seisdedos F, Silvestre JS, Homeostatic and tissue reparation defaults in mice carrying selective genetic invalidation of CXCL12/proteoglycan interactions, Circulation 2012 Oct;126(15):1882-95.

Bröker M, Jacobsson S, Kuusi M, Pace D, Simões MJ, Skoczynska A, Taha MK, Toropainen M, Tzanakaki G, Meningococcal serogroup Y emergence in Europe: update 2011, Hum Vaccin Immunother 2012 Dec;8(12):1907-11.

Domenech de Cellès M, Salomon J, Marinier A, Lawrence C, Gaillard JL, Herrmann JL, Guillemot D, Identifying more epidemic clones during a hospital outbreak of multidrug-resistant Acinetobacter baumannii, PLoS ONE 2012;7(9):e45758.

Caugant DA, Kristiansen PA, Wang X, Mayer LW, Taha MK, Ouédraogo R, Kandolo D, Bougoudogo F, Sow S, Bonte L, Molecular characterization of invasive meningococcal isolates from countries in the African meningitis belt before introduction of a serogroup A conjugate vaccine, PLoS ONE 2012;7(9):e46019.

Couderc T, Gangneux N, Chrétien F, Caro V, Le Luong T, Ducloux B, Tolou H, Lecuit M, Grandadam M, , Chikungunya virus infection of corneal grafts., J Infect Dis 2012 Sep; 206(6): 851-9.

Mounier J, Boncompain G, Senerovic L, Lagache T, Chrétien F, Perez F, Kolbe M, Olivo-Marin JC, Sansonetti PJ, Sauvonnet N, Shigella effector IpaB-induced cholesterol relocation disrupts the Golgi complex and recycling network to inhibit host cell secretion, Cell Host Microbe 2012 Sep;12(3):381-9.

Breban R, Doss W, Esmat G, Elsayed M, Hellard M, Ayscue P, Albert M, Fontanet A, Mohamed MK, Towards realistic estimates of HCV incidence in Egypt, J. Viral Hepat. 2013 Apr;20(4):294-6.

Tamara Giles-Vernick and Stephanie Rupp, Death does not come from the forest, but from the village’: People, great apes, and disease in the equatorial African rain forest, Cahiers d’anthropologie sociale 08, ed. Frédéric Keck and Noellie Vialles (Paris: L’Herne, 2012), 119-136..

Baligand C, Jouvion G, Schakman O, Gilson H, Wary C, Thissen JP, Carlier PG, Multiparametric functional nuclear magnetic resonance imaging shows alterations associated with plasmid electrotransfer in mouse skeletal muscle, J Gene Med 2012 Sep-Oct;14(9-10):598-608.

Levy C, Taha MK, Bingen E, Cohen R, , [Paediatric meningococcal meningitis in France: ACTIV/GPIP network results], Arch Pediatr 2012 Sep;19 Suppl 2:S49-54.

Sharshar T, Polito A, Porcher R, Merhbene T, Blanc M, Antona M, Durand MC, Friedman D, Orlikowski D, Annane D, Marcadet MH, Relevance of anxiety in clinical practice of Guillain-Barre syndrome: a cohort study, BMJ Open 2012;2(4).

Mounchetrou Njoya I, Deghmane A, Taha M, Isnard H, Parent du Chatelet I, A cluster of meningococcal disease caused by rifampicin-resistant C meningococci in France, April 2012, Euro Surveill. 2012 Aug;17(34).

Mongardon N, Max A, Bouglé A, Pène F, Lemiale V, Charpentier J, Cariou A, Chiche JD, Bedos JP, Mira JP, Epidemiology and outcome of severe pneumococcal pneumonia admitted to intensive care unit: a multicenter study, Crit Care 2012;16(4):R155.

Gay O, Plaze M, Oppenheim C, Mouchet-Mages S, Gaillard R, Olié JP, Krebs MO, Cachia A, Cortex morphology in first-episode psychosis patients with neurological soft signs, Schizophr Bull 2013 Jul;39(4):820-9.

Henrik Gad H, Paulous S, Belarbi E, Diancourt L, Drosten C, Kümmerer BM, Plate AE, Caro V, Desprès P, The E2-E166K substitution restores Chikungunya virus growth in OAS3 expressing cells by acting on viral entry, Virology 2012 Dec;434(1):27-37.

David JM, Guillemot D, Bemrah N, Thébault A, Brisabois A, Chemaly M, Weill FX, Sanders P, Watier L, The Bayesian microbial subtyping attribution model: robustness to prior information and a proposition, Risk Anal. 2013 Mar;33(3):397-408.

Plikaytis BD, Stella M, Boccadifuoco G, DeTora LM, Agnusdei M, Santini L, Brunelli B, Orlandi L, Simmini I, Giuliani M, Ledroit M, Hong E, Taha MK, Ellie K, Rajam G, Carlone GM, Claus H, Vogel U, Borrow R, Findlow J, Gilchrist S, Stefanelli P, Fazio C, Carannante A, Oksnes J, Fritzsønn E, Klem AM, Caugant DA, Abad R, Vázquez JA, Rappuoli R, Pizza M, Donnelly JJ, Medini D, Interlaboratory standardization of the sandwich enzyme-linked immunosorbent assay designed for MATS, a rapid, reproducible method for estimating the strain coverage of investigational vaccines, Clin. Vaccine Immunol. 2012 Oct;19(10):1609-17.

Kermas R, Touati A, Brasme L, Le Magrex-Debar E, Mehrane S, Weill FX, De Champs C, Characterization of extended-spectrum beta-lactamase-producing Salmonella enterica serotype Brunei and Heidelberg at the Hussein Dey hospital in Algiers (Algeria), Foodborne Pathog. Dis. 2012 Sep;9(9):803-8.

Holt KE, Baker S, Weill FX, Holmes EC, Kitchen A, Yu J, Sangal V, Brown DJ, Coia JE, Kim DW, Choi SY, Kim SH, da Silveira WD, Pickard DJ, Farrar JJ, Parkhill J, Dougan G, Thomson NR, Shigella sonnei genome sequencing and phylogenetic analysis indicate recent global dissemination from Europe, Nat. Genet. 2012 Sep;44(9):1056-9.

Saleh M, Lefèvre S, Acar N, Bourcier T, Marcellin L, Prévost G, Subilia A, Gaucher D, Jehl F, Efficacy of intravitreal administrations of linezolid in an experimental model of S. aureus-related endophthalmitis, Invest. Ophthalmol. Vis. Sci. 2012 Jul;53(8):4832-41.

Le Hello S, Weill FX, Guibert V, Praud K, Cloeckaert A, Doublet B, Early strains of multidrug-resistant Salmonella enterica serovar Kentucky sequence type 198 from Southeast Asia harbor Salmonella genomic island 1-J variants with a novel insertion sequence, Antimicrob. Agents Chemother. 2012 Oct;56(10):5096-102.

Nouët Y, Dahan J, Labalette C, Levillayer F, Julien B, Jouvion G, Cairo S, Vives FL, Ribeiro A, Huerre M, Colnot S, Perret C, Nhieu JT, Tordjmann T, Buendia MA, Wei Y, The four and a half LIM-only protein 2 regulates liver homeostasis and contributes to carcinogenesis, J. Hepatol. 2012 Nov;57(5):1029-36.

Sauvage V, Ar Gouilh M, Cheval J, Muth E, Pariente K, Burguiere A, Caro V, Manuguerra JC, Eloit M, A member of a new Picornaviridae genus is shed in pig feces, J. Virol. 2012 Sep;86(18):10036-46.

Brisse S, Diancourt L, Laouénan C, Vigan M, Caro V, Arlet G, Drieux L, Leflon-Guibout V, Mentré F, Jarlier V, Nicolas-Chanoine MH, , Phylogenetic distribution of CTX-M- and non-extended-spectrum-β-lactamase-producing Escherichia coli isolates: group B2 isolates, except clone ST131, rarely produce CTX-M enzymes, J. Clin. Microbiol. 2012 Sep;50(9):2974-81.

Ben Mohamed F, Mohamed FB, Garcia-Verdugo I, Medina M, Balloy V, Chignard M, Ramphal R, Touqui L, A crucial role of Flagellin in the induction of airway mucus production by Pseudomonas aeruginosa, PLoS ONE 2012;7(7):e39888.

Touqui L, Antisense inhibition of phospholipase A2: a new approach for already tested therapeutic targets for the treatment of sepsis*, Crit. Care Med. 2012 Jul;40(7):2250-1.

Van Kerkhove MD, Riley S, Lipsitch M, Guan Y, Monto AS, Webster RG, Zambon M, Nicoll A, Peiris JS, Ferguson NM, Comment on “Seroevidence for H5N1 influenza infections in humans: meta-analysis”, Science 2012 Jun;336(6088):1506; author reply 1506.

Quilès F, Polyakov P, Humbert F, Francius G, Production of extracellular glycogen by Pseudomonas fluorescens: spectroscopic evidence and conformational analysis by biomolecular recognition, Biomacromolecules 2012 Jul;13(7):2118-27.

Fiole D, Touvrey C, Quesnel-Hellmann A, Douady J, Tournier JN, Shape-based tracking allows functional discrimination of two immune cell subsets expressing the same fluorescent tag in mouse lung explant, PLoS ONE 2012;7(6):e39831.

Achtman M, Wain J, Weill FX, Nair S, Zhou Z, Sangal V, Krauland MG, Hale JL, Harbottle H, Uesbeck A, Dougan G, Harrison LH, Brisse S,, Multilocus sequence typing as a replacement for serotyping in Salmonella enterica, PLoS Pathog. 2012;8(6):e1002776.

Moura DS, Sultan S, Georgin-Lavialle S, Barete S, Lortholary O, Gaillard R, Hermine O, Evidence for cognitive impairment in mastocytosis: prevalence, features and correlations to depression, PLoS ONE 2012;7(6):e39468.

Pedergnana V, Abdel-Hamid M, Guergnon J, Mohsen A, Le Fouler L, Theodorou I, Mohamed MK, Fontanet A, Plancoulaine S, Abel L, Analysis of IL28B variants in an Egyptian population defines the 20 kilobases minimal region involved in spontaneous clearance of hepatitis C virus, PLoS ONE 2012;7(6):e38578.

Latil M, Rocheteau P, Châtre L, Sanulli S, Mémet S, Ricchetti M, Tajbakhsh S, Chrétien F, , Skeletal muscle stem cells adopt a dormant cell state post mortem and retain regenerative capacity., Nat Commun 2012 Jun; 3(): 903.

Balleyguier C, Fournet C, Ben Hassen W, Zareski E, Morice P, Haie-Meder C, Uzan C, Gouy S, Duvillard P, Lhommé C, Management of cervical cancer detected during pregnancy: role of magnetic resonance imaging, Clin Imaging 2013 Jan-Feb;37(1):70-6.

Fèvre Montange M, Vasiljevic A, Bergemer Fouquet AM, Bernier M, Champier J, Chrétien F, Figarella-Branger D, Kemeny JL, Lechapt-Zalcman E, Michalak S, Miquel C, Mokthari K, Pommepuy I, Quintin Roué I, Rousseau A, Saint-Pierre G, Salon C, Uro-Coste E, Varlet P, Kratzer I, Ghersi-Egea JF, Jouvet A, Histopathologic and ultrastructural features and claudin expression in papillary tumors of the pineal region: a multicenter analysis, Am. J. Surg. Pathol. 2012 Jun;36(6):916-28.

Desguerre I, Arnold L, Vignaud A, Cuvellier S, Yacoub-Youssef H, Gherardi RK, Chelly J, Chretien F, Mounier R, Ferry A, Chazaud B, A new model of experimental fibrosis in hindlimb skeletal muscle of adult mdx mouse mimicking muscular dystrophy, Muscle Nerve 2012 Jun;45(6):803-14.

Traoré SG, Bonfoh B, Krabi R, Odermatt P, Utzinger J, Rose KN, Tanner M, Frey J, Quilici ML, Koussémon M, Risk of Vibrio transmission linked to the consumption of crustaceans in coastal towns of Côte d’Ivoire, J. Food Prot. 2012 Jun;75(6):1004-11.

Rey-Cuille MA, Seck A, Njouom R, Chartier L, Sow HD, Mamadou , Ka AS, Njankouo M, Rousset D, Giles-Vernick T, Unal G, Sire JM, Garin B, Simon F, Vray M, Low immune response to hepatitis B vaccine among children in Dakar, Senegal, PLoS ONE 2012;7(5):e38153.

Mir O, Durand JP, Boudou-Rouquette P, Giroux J, Coriat R, Cessot A, Ropert S, Goldwasser F, Gaillard R, Interaction between serotonin reuptake inhibitors, 5-HT3 antagonists, and NK1 antagonists in cancer patients receiving highly emetogenic chemotherapy: a case-control study, Support Care Cancer 2012 Sep;20(9):2235-9.

Page AL, Alberti KP, Mondonge V, Rauzier J, Quilici ML, Guerin PJ, Evaluation of a rapid test for the diagnosis of cholera in the absence of a gold standard, PLoS ONE 2012;7(5):e37360.

Caron F, Delbos V, Houivet E, Deghmane AE, Leroy JP, Hong E, Bénichou J, Taha MK, Evolution of immune response against Neisseria meningitidis B:14:P1.7,16 before and after the outer membrane vesicle vaccine MenBvac, Vaccine 2012 Jul;30(34):5059-62.

Vogel U, Stefanelli P, Vazquez J, Taha MK, Claus H, Donnelly J, The use of vaccine antigen characterization, for example by MATS, to guide the introduction of meningococcus B vaccines, Vaccine 2012 May;30 Suppl 2:B73-7.

Hopkinson NS, Sharshar T, Dayer MJ, Lofaso F, Moxham J, Polkey MI, The effect of acute non-invasive ventilation on corticospinal pathways to the respiratory muscles in chronic obstructive pulmonary disease, Respir Physiol Neurobiol 2012 Jul;183(1):41-7.

Picard H, Le Seac'h A, Amado I, Gaillard R, Krebs MO, Beauvillain C, Impaired saccadic adaptation in schizophrenic patients with high neurological soft sign scores, Psychiatry Res 2012 Aug;199(1):12-8.

Parent du Chatelet I, Barboza P, Taha MK, W135 invasive meningococcal infections imported from Sub-Saharan Africa to France, January to April 2012, Euro Surveill. 2012 May;17(21).

Charlier P, Watier L, Ménétrier M, Chaillot PF, Brun L, de la Grandmaison GL, Is suicide risk correlated to thyroid weight?, Med. Hypotheses 2012 Aug;79(2):264-6.

Fabre L, Zhang J, Guigon G, Le Hello S, Guibert V, Accou-Demartin M, de Romans S, Lim C, Roux C, Passet V, Diancourt L, Guibourdenche M, Issenhuth-Jeanjean S, Achtman M, Brisse S, Sola C, Weill FX, CRISPR typing and subtyping for improved laboratory surveillance of Salmonella infections, PLoS ONE 2012;7(5):e36995.

Rosec JP, Causse V, Cruz B, Rauzier J, Carnat L, The international standard ISO/TS 21872-1 to study the occurence of total and pathogenic Vibrio parahaemolyticus and Vibrio cholerae in seafood: ITS improvement by use of a chromogenic medium and PCR, Int. J. Food Microbiol. 2012 Jul;157(2):189-94.

Taha MK, Deghmane AE, , Vaccines targeting serogroup B meningococci., Lancet Infect Dis 2012 Aug; 12(8): 578-9.

Nicoll A, Ciancio BC, Lopez Chavarrias V, Mølbak K, Pebody R, Pedzinski B, Penttinen P, van der Sande M, Snacken R, Van Kerkhove MD, Influenza-related deaths–available methods for estimating numbers and detecting patterns for seasonal and pandemic influenza in Europe, Euro Surveill. 2012;17(18).

Haus-Cheymol R, Theodose R, Quilici ML, Chevallier G, Liautaud B, Ktari F, Garcia J, de Laval F, Migliani R, A cluster of acute diarrhea suspected to be cholera in French travelers in Haiti, December 2010, J Travel Med 2012 May-Jun;19(3):189-91.

Bröker M, Jacobsson S, DeTora L, Pace D, Taha MK, Increase of meningococcal serogroup Y cases in Europe: a reason for concern?, Hum Vaccin Immunother 2012 May;8(5):685-8.

Laurie KL, Huston P, Riley S, Katz JM, Willison DJ, Tam JS, Mounts AW, Hoschler K, Miller E, Vandemaele K, Broberg E, Van Kerkhove MD, Nicoll A, Influenza serological studies to inform public health action: best practices to optimise timing, quality and reporting, Influenza Other Respir Viruses 2013 Mar;7(2):211-24.

Boumart Z, Roche SM, Lalande F, Virlogeux-Payant I, Hennequet-Antier C, Menanteau P, Gabriel I, Weill FX, Velge P, Chemaly M, Heterogeneity of persistence of Salmonella enterica serotype Senftenberg strains could explain the emergence of this serotype in poultry flocks, PLoS ONE 2012;7(4):e35782.

Sayes F, Sun L, Di Luca M, Simeone R, Degaiffier N, Fiette L, Esin S, Brosch R, Bottai D, Leclerc C, Majlessi L, Strong immunogenicity and cross-reactivity of Mycobacterium tuberculosis ESX-5 type VII secretion: encoded PE-PPE proteins predicts vaccine potential, Cell Host Microbe 2012 Apr;11(4):352-63.

Huynh BT, Fievet N, Briand V, Borgella S, Massougbodji A, Deloron P, Cot M, Consequences of gestational malaria on birth weight: finding the best timeframe for intermittent preventive treatment administration, PLoS ONE 2012;7(4):e35342.

Boucherma R, Kridane-Miledi H, Vives FL, Vauchy C, Borg C, Kleinclauss F, Fiette L, Tiberghien P, Lemonnier FA, Rohrlich PS, Huetz F, Loss of central and peripheral CD8+ T-cell tolerance to HFE in mouse models of human familial hemochromatosis, Eur. J. Immunol. 2012 Apr;42(4):851-62.

Lefort A, Chartier L, Sendid B, Wolff M, Mainardi JL, Podglajen I, Desnos-Ollivier M, Fontanet A, Bretagne S, Lortholary O, , , Diagnosis, management and outcome of Candida endocarditis., Clin Microbiol Infect 2012 Apr; 18(4): E99-E109.

Van Kerkhove MD, Ferguson NM, Epidemic and intervention modelling–a scientific rationale for policy decisions? Lessons from the 2009 influenza pandemic, Bull. World Health Organ. 2012 Apr;90(4):306-10.

Le Dorze M, Bouglé A, Deruddre S, Duranteau J, Renal Doppler ultrasound: a new tool to assess renal perfusion in critical illness, Shock 2012 Apr;37(4):360-5.

Vanhoof R, Gillis P, Stévart O, Boland C, Vandenberg O, Fux F, Collard JM, Bertrand S, Transmission of multiple resistant Salmonella Concord from internationally adopted children to their adoptive families and social environment: proposition of guidelines., Eur J Clin Microbiol Infect Dis 2012 Apr; 31(4): 491-7.

King LA, Nogareda F, Weill FX, Mariani-Kurkdjian P, Loukiadis E, Gault G, Jourdan-DaSilva N, Bingen E, Macé M, Thevenot D, Ong N, Castor C, Noël H, Van Cauteren D, Charron M, Vaillant V, Aldabe B, Goulet V, Delmas G, Couturier E, Le Strat Y, Combe C, Delmas Y, Terrier F, Vendrely B, Rolland P, de Valk H, Outbreak of Shiga toxin-producing Escherichia coli O104:H4 associated with organic fenugreek sprouts, France, June 2011, Clin. Infect. Dis. 2012 Jun;54(11):1588-94.

Gougeon ML, Herbeuval JP, IFN-α and TRAIL: a double edge sword in HIV-1 disease?, Exp. Cell Res. 2012 Jul;318(11):1260-8.

Balleyguier C, Canale S, Ben Hassen W, Vielh P, Bayou EH, Mathieu MC, Uzan C, Bourgier C, Dromain C, Breast elasticity: principles, technique, results: an update and overview of commercially available software, Eur J Radiol 2013 Mar;82(3):427-34.

Sonneville R, den Hertog HM, Güiza F, Gunst J, Derese I, Wouters PJ, Brouland JP, Polito A, Gray F, Chrétien F, Charlier P, Annane D, Sharshar T, Van den Berghe G, Vanhorebeek I, Impact of hyperglycemia on neuropathological alterations during critical illness, J. Clin. Endocrinol. Metab. 2012 Jun;97(6):2113-23.

Garcia-Verdugo I, BenMohamed F, Tattermusch S, Leduc D, Charpigny G, Chignard M, Ollero M, Touqui L, A role for 12R-lipoxygenase in MUC5AC expression by respiratory epithelial cells, Eur. Respir. J. 2012 Sep;40(3):714-23.

Santos A, Cale E, Dacheux L, Bourhy H, Gouveia J, Vasconcelos P, Fatal case of imported human rabies in Amadora, Portugal, August 2011, Euro Surveill. 2012 Mar;17(12).

Balabanian K, Brotin E, Biajoux V, Bouchet-Delbos L, Lainey E, Fenneteau O, Bonnet D, Fiette L, Emilie D, Bachelerie F, Proper desensitization of CXCR4 is required for lymphocyte development and peripheral compartmentalization in mice, Blood 2012 Jun;119(24):5722-30.

Domingo P, Guardiola JM, Salazar J, Torres F, Mateo MG, Pacho C, Del Mar Gutierrez M, Lamarca K, Fontanet A, Martin J, Muñoz J, Vidal F, Baiget M, Association of ITPA gene polymorphisms and the risk of ribavirin-induced anemia in HIV/hepatitis C virus (HCV)-coinfected patients receiving HCV combination therapy, Antimicrob. Agents Chemother. 2012 Jun;56(6):2987-93.

Coïc YM, Baleux F, Poyraz Ö, Thibeaux R, Labruyere E, Chretien F, Sobhani I, Lazure T, Wyplosz B, Schneider G, Mulard L, Sansonetti PJ, Marteyn BS, Design of a specific colonic mucus marker using a human commensal bacterium cell surface domain, J. Biol. Chem. 2012 May;287(19):15916-22.

Jackowski O, Chrétien F, Didierjean C, Chapleur Y, Formation of septanoses from hexopyranosides via 5,6-exo-glycals, Carbohydr. Res. 2012 Jul;356:93-103.

Dupin N, Lecuyer H, Carlotti A, Poyart C, Coureuil M, Chanal J, Schmitt A, Vacher-Lavenu MC, Taha MK, Nassif X, Morand PC, Chronic meningococcemia cutaneous lesions involve meningococcal perivascular invasion through the remodeling of endothelial barriers, Clin. Infect. Dis. 2012 Apr;54(8):1162-5.

Mir O, Adam J, Gaillard R, Gregory T, Veyrie N, Yordanov Y, Berveiller P, Chousterman B, Loulergue P, Vaccination coverage among medical residents in Paris, France, Clin. Microbiol. Infect. 2012 May;18(5):E137-9.

Biotti D, Vignal C, Sharshar T, Gout O, McCoy AN, Miller NR, Blindness, weakness, and tingling, Surv Ophthalmol 2012 Nov;57(6):565-72.

Zouaoui S, Rigau V, Mathieu-Daudé H, Darlix A, Bessaoud F, Fabbro-Peray P, Bauchet F, Kerr C, Fabbro M, Figarella-Branger D, Taillandier L, Duffau H, Trétarre B, Bauchet L, , , , [French brain tumor database: general results on 40,000 cases, main current applications and future prospects], Neurochirurgie 2012 Feb;58(1):4-13.

Breban R, Role of environmental persistence in pathogen transmission: a mathematical modeling approach, J Math Biol 2013 Feb;66(3):535-46.

Barbier D, Garcia-Verdugo I, Pothlichet J, Khazen R, Descamps D, Rousseau K, Thornton D, Si-Tahar M, Touqui L, Chignard M, Sallenave JM, Influenza A induces the major secreted airway mucin MUC5AC in a protease-EGFR-extracellular regulated kinase-Sp1-dependent pathway, Am. J. Respir. Cell Mol. Biol. 2012 Aug;47(2):149-57.

Jusot JF, Adamou L, Collard JM, Influenza transmission during a one-year period (2009-2010) in a Sahelian city: low temperature plays a major role., Influenza Other Respir Viruses 2012 Mar; 6(2): 87-9.

Lefèvre S, Saleh M, Marcellin L, Subilia A, Bourcier T, Prévost G, Jehl F, Daptomycin versus vancomycin in a methicillin-resistant Staphylococcus aureus endophthalmitis rabbit model: bactericidal effect, safety, and ocular pharmacokinetics, Antimicrob. Agents Chemother. 2012 May;56(5):2485-92.

Meynard JB, Flamand C, Dupuy C, Mahamat A, Eltges F, Queuche F, Renner J, Fontanella JM, Hommel D, Dussart P, Grangier C, Djossou F, Dacheux L, Goudal M, Berger F, Ardillon V, Krieger N, Bourhy H, Spiegel A, First human rabies case in French Guiana, 2008: epidemiological investigation and control, PLoS Negl Trop Dis 2012;6(2):e1537.

Pean P, Nerrienet E, Madec Y, Borand L, Laureillard D, Fernandez M, Marcy O, Sarin C, Phon K, Taylor S, Pancino G, Barré-Sinoussi F, Scott-Algara D,, Natural killer cell degranulation capacity predicts early onset of the immune reconstitution inflammatory syndrome (IRIS) in HIV-infected patients with tuberculosis, Blood 2012 Apr;119(14):3315-20.

Zahar JR, Masse V, Watier L, Lanternier F, Degand N, Postaire M, Descamps P, Nassif X, Lortholary O, Is hand-rub consumption correlated with hand hygiene and rate of extended-spectrum beta-lactamase-producing Enterobacteriaceae (ESBL-PE)-acquired infections?, J. Hosp. Infect. 2012 Apr;80(4):348-50.

Martel-Jantin C, Filippone C, Cassar O, Peter M, Tomasic G, Vielh P, Brière J, Petrella T, Aubriot-Lorton MH, Mortier L, Jouvion G, Sastre-Garau X, Robert C, Gessain A, Genetic variability and integration of Merkel cell polyomavirus in Merkel cell carcinoma, Virology 2012 May;426(2):134-42.

Luissint AC, Federici C, Guillonneau F, Chrétien F, Camoin L, Glacial F, Ganeshamoorthy K, Couraud PO, Guanine nucleotide-binding protein Gαi2: a new partner of claudin-5 that regulates tight junction integrity in human brain endothelial cells, J. Cereb. Blood Flow Metab. 2012 May;32(5):860-73.

Guerra J, Garenne M, Mohamed MK, Fontanet A, HCV burden of infection in Egypt: results from a nationwide survey, J. Viral Hepat. 2012 Aug;19(8):560-7.

Grad YH, Lipsitch M, Feldgarden M, Arachchi HM, Cerqueira GC, Fitzgerald M, Godfrey P, Haas BJ, Murphy CI, Russ C, Sykes S, Walker BJ, Wortman JR, Young S, Zeng Q, Abouelleil A, Bochicchio J, Chauvin S, Desmet T, Gujja S, McCowan C, Montmayeur A, Steelman S, Frimodt-Møller J, Petersen AM, Struve C, Krogfelt KA, Bingen E, Weill FX, Lander ES, Nusbaum C, Birren BW, Hung DT, Hanage WP, Genomic epidemiology of the Escherichia coli O104:H4 outbreaks in Europe, 2011, Proc. Natl. Acad. Sci. U.S.A. 2012 Feb;109(8):3065-70.

Gossner CM, van Cauteren D, Le Hello S, Weill FX, Terrien E, Tessier S, Janin C, Brisabois A, Dusch V, Vaillant V, Jourdan-da Silva N, Nationwide outbreak of Salmonella enterica serotype 4,[5],12:i:- infection associated with consumption of dried pork sausage, France, November to December 2011, Euro Surveill. 2012 Feb;17(5).

Mourikis P, Sambasivan R, Castel D, Rocheteau P, Bizzarro V, Tajbakhsh S, A critical requirement for notch signaling in maintenance of the quiescent skeletal muscle stem cell state, Stem Cells 2012 Feb;30(2):243-52.

Colin G, Nardi O, Polito A, Aboab J, Maxime V, Clair B, Friedman D, Orlikowski D, Sharshar T, Annane D, Masseter tissue oxygen saturation predicts normal central venous oxygen saturation during early goal-directed therapy and predicts mortality in patients with severe sepsis, Crit. Care Med. 2012 Feb;40(2):435-40.

Rocheteau P, Gayraud-Morel B, Siegl-Cachedenier I, Blasco MA, Tajbakhsh S, A subpopulation of adult skeletal muscle stem cells retains all template DNA strands after cell division, Cell 2012 Jan;148(1-2):112-25.

Delarocque-Astagneau E, Abravanel F, Moshen A, Le Fouler L, Gad RR, El-Daly M, Ibrahim EM, El-Aidy S, Lashin T, El-Hoseiny M, Izopet J, Mohamed MK, Fontanet A, Abdel Hamid M, Epidemiological and virological characteristics of symptomatic acute hepatitis E in Greater Cairo, Egypt, Clin. Microbiol. Infect. 2012 Oct;18(10):982-8.

Ceperuelo-Mallafré V, Escoté X, Viladés C, Peraire J, Domingo P, Solano E, Sirvent JJ, Pastor R, Tinahones F, Leal M, Richart C, Vendrell J, Vidal F, , Alba V, Aguilar A, Auguet T, Chacón MR, López-Dupla M, Megia A, Miranda M, Olona M, Saurí A, Vargas M, Velasco I, Veloso S, Fontanet A, Gutiérrez M, Mateo G, Muñoz J, Sambeat MA, Zinc alpha-2 glycoprotein is implicated in dyslipidaemia in HIV-1-infected patients treated with antiretroviral drugs, HIV Med. 2012 May;13(5):297-303.

Ginevra C, Jacotin N, Diancourt L, Guigon G, Arquilliere R, Meugnier H, Descours G, Vandenesch F, Etienne J, Lina G, Caro V, Jarraud S, Legionella pneumophila sequence type 1/Paris pulsotype subtyping by spoligotyping, J. Clin. Microbiol. 2012 Mar;50(3):696-701.

Hendriksen RS, Le Hello S, Bortolaia V, Pulsrikarn C, Nielsen EM, Pornruangmong S, Chaichana P, Svendsen CA, Weill FX, Aarestrup FM, Characterization of isolates of Salmonella enterica serovar Stanley, a serovar endemic to Asia and associated with travel, J. Clin. Microbiol. 2012 Mar;50(3):709-20.

Marlin R, Duriez M, Berkane N, de Truchis C, Madec Y, Rey-Cuille MA, Cummings JS, Cannou C, Quillay H, Barré-Sinoussi F, Nugeyre MT, Menu E, Dynamic shift from CD85j/ILT-2 to NKG2D NK receptor expression pattern on human decidual NK during the first trimester of pregnancy, PLoS ONE 2012;7(1):e30017.

Breban R, Bisiaux A, Biot C, Rentsch C, Bousso P, Albert ML, Mathematical model of tumor immunotherapy for bladder carcinoma identifies the limitations of the innate immune response, Oncoimmunology 2012 Jan;1(1):9-17.

Le Hello S, Brisabois A, Accou-Demartin M, Josse A, Marault M, Francart S, Da Silva NJ, Weill FX, Foodborne outbreak and nonmotile Salmonella enterica variant, France, Emerging Infect. Dis. 2012 Jan;18(1):132-4.

Le Flèche-Matéos A, Berthet N, Lomprez F, Arnoux Y, Le Guern AS, Leclercq I, Burguière AM, Manuguerra JC, Recurrent Breast Abscesses due to Corynebacterium kroppenstedtii, a Human Pathogen Uncommon in Caucasian Women., Case Rep Infect Dis 2012 ; 2012(): 120968.

Hong E, Barraud O, Bidet P, Bingen E, Blondiaux N, Bonacorsi S, Burucoa C, Carrer A, Fortineau N, Couetdic G, Courcol R, Garnier F, Hery-Arnaud G, Lanotte P, Le Bars H, Legrand-Quillien MC, Lemée L, Mereghetti L, Millardet C, Minet J, Plouzeau-Jayle C, Pons JL, Schneider J, Taha MK, , Proficiency of PCR in hospital settings for nonculture diagnosis of invasive meningococcal infections., Clin Lab 2012 ; 58(3-4): 343-6.

Jouvion G, Brock M, Droin-Bergère S, Ibrahim-Granet O, Duality of liver and kidney lesions after systemic infection of immunosuppressed and immunocompetent mice with Aspergillus fumigatus, Virulence 2012 Jan-Feb;3(1):43-50.

Copin S, Robert-Pillot A, Malle P, Quilici ML, Gay M, Evaluation of most-probable-number-PCR method with internal amplification control for the counting of total and pathogenic Vibrio parahaemolyticus in frozen shrimps, J. Food Prot. 2012 Jan;75(1):150-3.

Paireau J, Girond F, Collard JM, Maïnassara HB, Jusot JF, Analysing spatio-temporal clustering of meningococcal meningitis outbreaks in Niger reveals opportunities for improved disease control., PLoS Negl Trop Dis 2012 ; 6(3): e1577.

Borchert M, Mutyaba I, Van Kerkhove MD, Lutwama J, Luwaga H, Bisoborwa G, Turyagaruka J, Pirard P, Ndayimirije N, Roddy P, Van Der Stuyft P, Ebola haemorrhagic fever outbreak in Masindi District, Uganda: outbreak description and lessons learned, BMC Infect. Dis. 2011;11:357.

Piers RD, Azoulay E, Ricou B, Dekeyser Ganz F, Decruyenaere J, Max A, Michalsen A, Maia PA, Owczuk R, Rubulotta F, Depuydt P, Meert AP, Reyners AK, Aquilina A, Bekaert M, Van den Noortgate NJ, Schrauwen WJ, Benoit DD, , Perceptions of appropriateness of care among European and Israeli intensive care unit nurses and physicians, JAMA 2011 Dec;306(24):2694-703.

D'Archivio S, Medina M, Cosson A, Chamond N, Rotureau B, Minoprio P, Goyard S, Genetic engineering of Trypanosoma (Dutonella) vivax and in vitro differentiation under axenic conditions, PLoS Negl Trop Dis 2011 Dec;5(12):e1461.

Breban R, Health newscasts for increasing influenza vaccination coverage: an inductive reasoning game approach, PLoS ONE 2011;6(12):e28300.

Charlier P, Bridoux V, Watier L, Ménétrier M, de la Grandmaison GL, Hervé C, Ethics requirements and impact factor, J Med Ethics 2012 Apr;38(4):253-5.

Bourhy P, Collet L, Lernout T, Zinini F, Hartskeerl RA, van der Linden H, Thiberge JM, Diancourt L, Brisse S, Giry C, Pettinelli F, Picardeau M, Human leptospira isolates circulating in Mayotte (Indian Ocean) have unique serological and molecular features, J. Clin. Microbiol. 2012 Feb;50(2):307-11.

Koura GK, Ouedraogo S, Le Port A, Watier L, Cottrell G, Guerra J, Choudat I, Rachas A, Bouscaillou J, Massougbodji A, Garcia A, Anaemia during pregnancy: impact on birth outcome and infant haemoglobin level during the first 18 months of life, Trop. Med. Int. Health 2012 Mar;17(3):283-91.

Gommet C, Billecocq A, Jouvion G, Hasan M, Zaverucha do Valle T, Guillemot L, Blanchet C, van Rooijen N, Montagutelli X, Bouloy M, Panthier JJ, Tissue tropism and target cells of NSs-deleted rift valley fever virus in live immunodeficient mice, PLoS Negl Trop Dis 2011 Dec;5(12):e1421.

Ziauddeen H, Subramaniam N, Gaillard R, Burke LK, Farooqi IS, Fletcher PC, Food images engage subliminal motivation to seek food, Int J Obes (Lond) 2012 Sep;36(9):1245-7.

Opinel A, Tröhler U, Gluud C, Gachelin G, Smith GD, Podolsky SH, Chalmers I, The evolution of methods to assess the effects of treatments, illustrated by the development of treatments for diphtheria, 1825-1918, Int J Epidemiol 2013 Jun;42(3):662-76.

Deghmane AE, El Kafsi H, Giorgini D, Abaza A, Taha MK, , Late repression of NF-κB activity by invasive but not non-invasive meningococcal isolates is required to display apoptosis of epithelial cells., PLoS Pathog 2011 Dec; 7(12): e1002403.

Dublineau A, Batéjat C, Pinon A, Burguière AM, Leclercq I, Manuguerra JC, , Persistence of the 2009 pandemic influenza A (H1N1) virus in water and on non-porous surface., PLoS One 2011 ; 6(11): e28043.

Lajous M, Tondeur L, Fagherazzi G, de Lauzon-Guillain B, Boutron-Ruaualt MC, Clavel-Chapelon F, Processed and unprocessed red meat consumption and incident type 2 diabetes among French women, Diabetes Care 2012 Jan;35(1):128-30.

Grimaldi-Bensouda L, Begaud B, Lert F, Rouillon F, Massol J, Guillemot D, Avouac B, Duru G, Magnier AM, Rossignol M, Abenhaim L, , Benchmarking the burden of 100 diseases: results of a nationwide representative survey within general practices, BMJ Open 2011;1(2):e000215.

Le Port A, Watier L, Cottrell G, Ouédraogo S, Dechavanne C, Pierrat C, Rachas A, Bouscaillou J, Bouraima A, Massougbodji A, Fayomi B, Thiébaut A, Chandre F, Migot-Nabias F, Martin-Prevel Y, Garcia A, Cot M, Infections in infants during the first 12 months of life: role of placental malaria and environmental factors, PLoS ONE 2011;6(11):e27516.

Movert E, Wu Y, Lambeau G, Touqui L, Areschoug T, A novel bacterial resistance mechanism against human group IIA-secreted phospholipase A2: role of Streptococcus pyogenes sortase A, J. Immunol. 2011 Dec;187(12):6437-46.

Landier J, Boisier P, Fotso Piam F, Noumen-Djeunga B, Simé J, Wantong FG, Marsollier L, Fontanet A, Eyangoh S, Adequate wound care and use of bed nets as protective factors against Buruli Ulcer: results from a case control study in Cameroon, PLoS Negl Trop Dis 2011 Nov;5(11):e1392.

Polito A, Sonneville R, Guidoux C, Barrett L, Viltart O, Mattot V, Siami S, Lorin de la Grandmaison G, Chrétien F, Singer M, Gray F, Annane D, Brouland JP, Sharshar T, Changes in CRH and ACTH synthesis during experimental and human septic shock, PLoS ONE 2011;6(11):e25905.

Barraud O, Badell E, Denis F, Guiso N, Ploy MC, Antimicrobial drug resistance in Corynebacterium diphtheriae mitis, Emerging Infect. Dis. 2011 Nov;17(11):2078-80.

Guillot J, Vermeulen B, Lafosse S, Chauffour S, Cibot M, Narat V, Masi S, Nieguitsila A, Snounou G, Bain O, Krief S, [Nematodes of the genus Oesophagostomum: an emerging risk for humans and apes in Africa?], Bull. Acad. Natl. Med. 2011 Nov;195(8):1955-63; discussion 1963.

Collard JM, Maman Z, Abani A, Mainasara HB, Djibo S, Yacouba H, Maitournam R, Sidikou F, Nicolas P, Rocourt J, Jusot JF, Microbiological and epidemiological investigation of the Neisseria meningitidis serogroup A epidemic in Niger in 2009: last wave before the introduction of the serogroup A meningococcal conjugate vaccine?, Epidemiol Infect 2011 Nov; 139(11): 1656-60.

Danne C, Entenza JM, Mallet A, Briandet R, Débarbouillé M, Nato F, Glaser P, Jouvion G, Moreillon P, Trieu-Cuot P, Dramsi S, Molecular characterization of a Streptococcus gallolyticus genomic island encoding a pilus involved in endocarditis, J. Infect. Dis. 2011 Dec;204(12):1960-70.

Hill M, Deghmane AE, Segovia M, Zarantonelli ML, Tilly G, Blancou P, Bériou G, Josien R, Anegon I, Hong E, Ruckly C, Antignac A, El Ghachi M, Boneca IG, Taha MK, Cuturi MC, Penicillin binding proteins as danger signals: meningococcal penicillin binding protein 2 activates dendritic cells through Toll-like receptor 4, PLoS ONE 2011;6(10):e23995.

Werneke SW, Schilte C, Rohatgi A, Monte KJ, Michault A, Arenzana-Seisdedos F, Vanlandingham DL, Higgs S, Fontanet A, Albert ML, Lenschow DJ, ISG15 is critical in the control of Chikungunya virus infection independent of UbE1L mediated conjugation, PLoS Pathog. 2011 Oct;7(10):e1002322.

Blanc FX, Sok T, Laureillard D, Borand L, Rekacewicz C, Nerrienet E, Madec Y, Marcy O, Chan S, Prak N, Kim C, Lak KK, Hak C, Dim B, Sin CI, Sun S, Guillard B, Sar B, Vong S, Fernandez M, Fox L, Delfraissy JF, Goldfeld AE, , Earlier versus later start of antiretroviral therapy in HIV-infected adults with tuberculosis, N. Engl. J. Med. 2011 Oct;365(16):1471-81.

El Tahchy A, Ptak A, Boisbrun M, Barre E, Guillou C, Dupire F, Chrétien F, Henry M, Chapleur Y, Laurain-Mattar D, Kinetic study of the rearrangement of deuterium-labeled 4′-O-methylnorbelladine in Leucojum aestivum shoot cultures by mass spectrometry. Influence of precursor feeding on amaryllidaceae alkaloid accumulation, J. Nat. Prod. 2011 Nov;74(11):2356-61.

Monecke S, Mariani-Kurkdjian P, Bingen E, Weill FX, Balière C, Slickers P, Ehricht R, Presence of enterohemorrhagic Escherichia coli ST678/O104:H4 in France prior to 2011, Appl. Environ. Microbiol. 2011 Dec;77(24):8784-6.

Berthet N, Nakouné E, Whist E, Selekon B, Burguière AM, Manuguerra JC, Gessain A, Kazanji M, Maculopapular lesions in the Central African Republic, Lancet 2011 Oct;378(9799):1354.

Taha MK, Deghmane AE, , Immediate outcomes of bacterial meningitis in childhood may benefit from slow initial β-lactam infusion and oral paracetamol., Future Microbiol 2011 Oct; 6(10): 1125-9.

Galmiche L, Serre V, Beinat M, Zossou R, Assouline Z, Lebre AS, Chretien F, Shenhav R, Zeharia A, Saada A, Vedrenne V, Boddaert N, de Lonlay P, Rio M, Munnich A, Rötig A, Toward genotype phenotype correlations in GFM1 mutations, Mitochondrion 2012 Mar;12(2):242-7.

Mariani-Kurkdjian P, Bingen E, Gault G, Jourdan-Da Silva N, Weill FX, Escherichia coli O104:H4 south-west France, June 2011, Lancet Infect Dis 2011 Oct;11(10):732-3.

Kardas-Sloma L, Boëlle PY, Opatowski L, Brun-Buisson C, Guillemot D, Temime L., Impact of antibiotic exposure patterns on selection of community-associated methicillin-resistant Staphylococcus aureus in hospital settings, Antimicrob Agents Chemother. 2011 Oct;55(10):4888-95..

Shirreff G, Pellis L, Laeyendecker O, Fraser C, Transmission selects for HIV-1 strains of intermediate virulence: a modelling approach., PLoS Comput Biol 2011 Oct; 7(10): e1002185.

Veyrier FJ, Boneca IG, Cellier MF, Taha MK, , A novel metal transporter mediating manganese export (MntX) regulates the Mn to Fe intracellular ratio and Neisseria meningitidis virulence., PLoS Pathog 2011 Sep; 7(9): e1002261.

Conti P, Tamborini L, Pinto A, Blondel A, Minoprio P, Mozzarelli A, De Micheli C, Drug discovery targeting amino acid racemases, Chem. Rev. 2011 Nov;111(11):6919-46.

Rouger K, Larcher T, Dubreil L, Deschamps JY, Le Guiner C, Jouvion G, Delorme B, Lieubeau B, Carlus M, Fornasari B, Theret M, Orlando P, Ledevin M, Zuber C, Leroux I, Deleau S, Guigand L, Testault I, Le Rumeur E, Fiszman M, Chérel Y, Systemic delivery of allogenic muscle stem cells induces long-term muscle repair and clinical efficacy in duchenne muscular dystrophy dogs, Am. J. Pathol. 2011 Nov;179(5):2501-18.

Michel G, Ferrua B, Lang T, Maddugoda MP, Munro P, Pomares C, Lemichez E, Marty P, Luciferase-expressing Leishmania infantum allows the monitoring of amastigote population size, in vivo, ex vivo and in vitro, PLoS Negl Trop Dis 2011 Sep;5(9):e1323.

Bouglé A, Duranteau J, Pathophysiology of sepsis-induced acute kidney injury: the role of global renal blood flow and renal vascular resistance, Contrib Nephrol 2011;174:89-97.

Cheval J, Sauvage V, Frangeul L, Dacheux L, Guigon G, Dumey N, Pariente K, Rousseaux C, Dorange F, Berthet N, Brisse S, Moszer I, Bourhy H, Manuguerra CJ, Lecuit M, Burguiere A, Caro V, Eloit M, , Evaluation of high-throughput sequencing for identifying known and unknown viruses in biological samples., J Clin Microbiol 2011 Sep; 49(9): 3268-75.

Gougeon ML, Bras M, Natural killer cells, dendritic cells, and the alarmin high-mobility group box 1 protein: a dangerous trio in HIV-1 infection?, Curr Opin HIV AIDS 2011 Sep;6(5):364-72.

Opatowski L, Fraser C, Griffin J, de Silva E, Van Kerkhove MD, Lyons EJ, Cauchemez S, Ferguson NM, Transmission characteristics of the 2009 H1N1 influenza pandemic: comparison of 8 Southern hemisphere countries, PLoS Pathog. 2011 Sep;7(9):e1002225.

Schmidt M, Demoule A, Polito A, Porchet R, Aboab J, Siami S, Morelot-Panzini C, Similowski T, Sharshar T, Dyspnea in mechanically ventilated critically ill patients, Crit. Care Med. 2011 Sep;39(9):2059-65.

Basmaci R, Mariani P, Delacroix G, Azib S, Faye A, Taha MK, Bingen E, Bonacorsi S, Romero JR, Rotbart HA, Nyquist AC, Nolte FS, Enteroviral meningitis does not exclude concurrent bacterial meningitis, J. Clin. Microbiol. 2011 Sep;49(9):3442-3.

Carnec X, Baize S, Reynard S, Diancourt L, Caro V, Tordo N, Bouloy M, Lassa virus nucleoprotein mutants generated by reverse genetics induce a robust type I interferon response in human dendritic cells and macrophages, J. Virol. 2011 Nov;85(22):12093-7.

Masi S, Gustafsson E, Saint Jalme M, Narat V, Todd A, Bomsel MC, Krief S, Unusual feeding behavior in wild great apes, a window to understand origins of self-medication in humans: role of sociality and physiology on learning process, Physiol. Behav. 2012 Jan;105(2):337-49.

Reynes JM, Andriamandimby SF, Razafitrimo GM, Razainirina J, Jeanmaire EM, Bourhy H, Heraud JM, Laboratory surveillance of rabies in humans, domestic animals, and bats in madagascar from 2005 to 2010, Adv Prev Med 2011;2011:727821.

Mailles A, Boisseleau D, Dacheux L, Michalewiscz C, Gloaguen C, Ponçon N, Bourhy H, Callon H, Vaillant V, Dabosville I, Morineau-Le Houssine P, Rabid dog illegally imported to France from Morocco, August 2011, Euro Surveill. 2011 Aug;16(33).

Gaillard A, Gaillard R, Mouaffak F, Radtchenko A, Lôo H, [Case report: electroconvulsive therapy in a 33-year-old man with hysterical quadriplegia], Encephale 2012 Feb;38(1):104-9.

Bolon B, Couto S, Fiette L, Perle KL, Internet and print resources to facilitate pathology analysis when phenotyping genetically engineered rodents, Vet. Pathol. 2012 Jan;49(1):224-35.

Le Hello S, Hendriksen RS, Doublet B, Fisher I, Nielsen EM, Whichard JM, Bouchrif B, Fashae K, Granier SA, Jourdan-Da Silva N, Cloeckaert A, Threlfall EJ, Angulo FJ, Aarestrup FM, Wain J, Weill FX, International spread of an epidemic population of Salmonella enterica serotype Kentucky ST198 resistant to ciprofloxacin, J. Infect. Dis. 2011 Sep;204(5):675-84.

Sauvage V, Foulongne V, Cheval J, Ar Gouilh M, Pariente K, Dereure O, Manuguerra JC, Richardson J, Lecuit M, Burguière A, Caro V, Eloit M, , Human polyomavirus related to African green monkey lymphotropic polyomavirus., Emerg Infect Dis 2011 Aug; 17(8): 1364-70.

Sauvage V, Cheval J, Foulongne V, Gouilh MA, Pariente K, Manuguerra JC, Richardson J, Dereure O, Lecuit M, Burguiere A, Caro V, Eloit M, , Identification of the first human gyrovirus, a virus related to chicken anemia virus., J Virol 2011 Aug; 85(15): 7948-50.

Abe Y, Polyakov P, Skali-Lami S, Francius G, Elasticity and physico-chemical properties during drinking water biofilm formation, Biofouling 2011 Aug;27(7):739-50.

Sharshar T, Porcher R, Siami S, Rohaut B, Bailly-Salin J, Hopkinson NS, Clair B, Guidoux C, Iacobone E, Sonneville R, Polito A, Aboab J, Gaudry S, Morla O, Amouyal G, Azuar J, Allary J, Vieillard-Baron A, Wolff M, Cariou A, Annane D, , Brainstem responses can predict death and delirium in sedated patients in intensive care unit, Crit. Care Med. 2011 Aug;39(8):1960-7.

Huynh BT, Fievet N, Gbaguidi G, Dechavanne S, Borgella S, Guézo-Mévo B, Massougbodji A, Ndam NT, Deloron P, Cot M, Influence of the timing of malaria infection during pregnancy on birth weight and on maternal anemia in Benin, Am. J. Trop. Med. Hyg. 2011 Aug;85(2):214-20.

Stahl JP, Mailles A, Dacheux L, Morand P, Epidemiology of viral encephalitis in 2011, Med Mal Infect 2011 Sep;41(9):453-64.

Madec Y, Germanaud D, Moya-Alvarez V, Alkassoum W, Issa A, Amadou M, Tchiombiano S, Pizzocolo C, Huber F, Diallo S, Abdoulaye-Mamadou R, HIV prevalence and impact on renutrition in children hospitalised for severe malnutrition in Niger: an argument for more systematic screening, PLoS ONE 2011;6(7):e22787.

Domenech de Cellès M, Opatowski L, Salomon J, Varon E, Carbon C, Boëlle PY, Guillemot D, Intrinsic epidemicity of Streptococcus pneumoniae depends on strain serotype and antibiotic susceptibility pattern, Antimicrob. Agents Chemother. 2011 Nov;55(11):5255-61.

Rigau V, Zouaoui S, Mathieu-Daudé H, Darlix A, Maran A, Trétarre B, Bessaoud F, Bauchet F, Attaoua R, Fabbro-Peray P, Fabbro M, Kerr C, Taillandier L, Duffau H, Figarella-Branger D, Costes V, Bauchet L, , , , French brain tumor database: 5-year histological results on 25 756 cases, Brain Pathol. 2011 Nov;21(6):633-44.

Szatanik M, Hong E, Ruckly C, Ledroit M, Giorgini D, Jopek K, Nicola MA, Deghmane AE, Taha MK, , Experimental meningococcal sepsis in congenic transgenic mice expressing human transferrin., PLoS One 2011 ; 6(7): e22210.

Holt KE, Phan MD, Baker S, Duy PT, Nga TV, Nair S, Turner AK, Walsh C, Fanning S, Farrell-Ward S, Dutta S, Kariuki S, Weill FX, Parkhill J, Dougan G, Wain J, Emergence of a globally dominant IncHI1 plasmid type associated with multiple drug resistant typhoid, PLoS Negl Trop Dis 2011 Jul;5(7):e1245.

Guenin-Macé L, Carrette F, Asperti-Boursin F, Le Bon A, Caleechurn L, Di Bartolo V, Fontanet A, Bismuth G, Demangel C, , Mycolactone impairs T cell homing by suppressing microRNA control of L-selectin expression., Proc. Natl. Acad. Sci. U.S.A. 2011 Aug; 108(31): 12833-8.

Gouilh MA, Puechmaille SJ, Gonzalez JP, Teeling E, Kittayapong P, Manuguerra JC, SARS-Coronavirus ancestor’s foot-prints in South-East Asian bat colonies and the refuge theory, Infect. Genet. Evol. 2011 Oct;11(7):1690-702.

Van Kerkhove MD, Vandemaele KA, Shinde V, Jaramillo-Gutierrez G, Koukounari A, Donnelly CA, Carlino LO, Owen R, Paterson B, Pelletier L, Vachon J, Gonzalez C, Hongjie Y, Zijian F, Chuang SK, Au A, Buda S, Krause G, Haas W, Bonmarin I, Taniguichi K, Nakajima K, Shobayashi T, Takayama Y, Sunagawa T, Heraud JM, Orelle A, Palacios E, van der Sande MA, Wielders CC, Hunt D, Cutter J, Lee VJ, Thomas J, Santa-Olalla P, Sierra-Moros MJ, Hanshaoworakul W, Ungchusak K, Pebody R, Jain S, Mounts AW, , Risk factors for severe outcomes following 2009 influenza A (H1N1) infection: a global pooled analysis, PLoS Med. 2011 Jul;8(7):e1001053.

Bertrand S, Van Meervenne E, De Baere T, Vanhoof R, Collard JM, Ruckly C, Taha M, Carion F, Detection of a geographical and endemic cluster of hyper-invasive meningococcal strains., Microbes Infect 2011 Jul; 13(7): 684-90.

Bugarel M, Granier SA, Weill FX, Fach P, Brisabois A, A multiplex real-time PCR assay targeting virulence and resistance genes in Salmonella enterica serotype Typhimurium, BMC Microbiol. 2011;11:151.

Opatowski L, Guillemot D, Boëlle PY, Temime L., Contribution of mathematical modeling to the fight against bacterial antibiotic resistance, Curr Opin Infect Dis. 2011 Jun;24(3):279-87..

Chartier L, Leng C, Sire JM, Le Minor O, Saman M, Bercion R, Rahalison L, Fontanet A, Germany Y, L'her P, Mayaud C, Vray M, Factors associated with negative direct sputum examination in Asian and African HIV-infected patients with tuberculosis (ANRS 1260), PLoS ONE 2011;6(6):e21212.

Page AL, Alberti KP, Guénolé A, Mondongue V, Lonlas Mayele S, Guerin PJ, Quilici ML, Use of filter paper as a transport medium for laboratory diagnosis of cholera under field conditions, J. Clin. Microbiol. 2011 Aug;49(8):3021-3.

Accou-Demartin M, Gaborieau V, Song Y, Roumagnac P, Marchou B, Achtman M, Weill FX, Salmonella enterica Serotype Typhi with nonclassical quinolone resistance phenotype, Emerging Infect. Dis. 2011 Jun;17(6):1091-4.

Dacheux L, Delmas O, Bourhy H, Human rabies encephalitis prevention and treatment: progress since Pasteur’s discovery, Infect Disord Drug Targets 2011 Jun;11(3):251-99.

Opatowski L, Guillemot D, Boëlle PY, Temime L, Contribution of mathematical modeling to the fight against bacterial antibiotic resistance, Curr. Opin. Infect. Dis. 2011 Jun;24(3):279-87.

Dumetz F, Jouvion G, Khun H, Glomski IJ, Corre JP, Rougeaux C, Tang WJ, Mock M, Huerre M, Goossens PL, Noninvasive imaging technologies reveal edema toxin as a key virulence factor in anthrax, Am. J. Pathol. 2011 Jun;178(6):2523-35.

Lipsitch M, Finelli L, Heffernan RT, Leung GM, Redd SC, , Improving the evidence base for decision making during a pandemic: the example of 2009 influenza A/H1N1, Biosecur Bioterror 2011 Jun;9(2):89-115.

Amado I, Krebs MO, Gaillard R, Olié JP, Lôo H, [Principles of cognitive remediation in schizophrenia], Bull. Acad. Natl. Med. 2011 Jun;195(6):1319-30; discussion 1330-3.

Gaillard R, Mir O, Fluoxetine and motor recovery after ischaemic stroke, Lancet Neurol 2011 Jun;10(6):499; author reply 500-1.

Gachelin G, Opinel A, Malaria epidemics in Europe after the First World War: the early stages of an international approach to the control of the disease, Hist Cienc Saude Manguinhos 2011 Jun;18(2):431-69.

Dacheux L, The challenge of viral encephalitis: from etiological diagnosis to efficient antiviral drug discovery, Infect Disord Drug Targets 2011 Jun;11(3):205.

Poirel L, Castanheira M, Carrër A, Rodriguez CP, Jones RN, Smayevsky J, Nordmann P, , OXA-163, an OXA-48-related class D β-lactamase with extended activity toward expanded-spectrum cephalosporins., Antimicrob Agents Chemother 2011 Jun; 55(6): 2546-51.

Francius G, Polyakov P, Merlin J, Abe Y, Ghigo JM, Merlin C, Beloin C, Duval JF, Bacterial surface appendages strongly impact nanomechanical and electrokinetic properties of Escherichia coli cells subjected to osmotic stress, PLoS ONE 2011;6(5):e20066.

Harrison OB, Brueggemann AB, Caugant DA, van der Ende A, Frosch M, Gray S, Heuberger S, Krizova P, Olcen P, Slack M, Taha MK, Maiden MCJ, , Molecular typing methods for outbreak detection and surveillance of invasive disease caused by Neisseria meningitidis, Haemophilus influenzae and Streptococcus pneumoniae, a review., Microbiology (Reading) 2011 Aug; 157(Pt 8): 2181-2195.

Polito A, Brouland JP, Porcher R, Sonneville R, Siami S, Stevens RD, Guidoux C, Maxime V, de la Grandmaison GL, Chrétien FC, Gray F, Annane D, Sharshar T, Hyperglycaemia and apoptosis of microglial cells in human septic shock, Crit Care 2011;15(3):R131.

Chevalier S, Anidjar M, Scarlata E, Hamel L, Scherz A, Ficheux H, Borenstein N, Fiette L, Elhilali M, Preclinical study of the novel vascular occluding agent, WST11, for photodynamic therapy of the canine prostate, J. Urol. 2011 Jul;186(1):302-9.

Jyot J, Balloy V, Jouvion G, Verma A, Touqui L, Huerre M, Chignard M, Ramphal R, Type II secretion system of Pseudomonas aeruginosa: in vivo evidence of a significant role in death due to lung infection, J. Infect. Dis. 2011 May;203(10):1369-77.

Sabarly V, Bouvet O, Glodt J, Clermont O, Skurnik D, Diancourt L, de Vienne D, Denamur E, Dillmann C, The decoupling between genetic structure and metabolic phenotypes in Escherichia coli leads to continuous phenotypic diversity, J. Evol. Biol. 2011 Jul;24(7):1559-71.

Mahjoub-Messai F, Bidet P, Caro V, Diancourt L, Biran V, Aujard Y, Bingen E, Bonacorsi S, Escherichia coli isolates causing bacteremia via gut translocation and urinary tract infection in young infants exhibit different virulence genotypes, J. Infect. Dis. 2011 Jun;203(12):1844-9.

Buckwalter MR, Nga PT, Gouilh MA, Fiette L, Bureau JF, Laird ME, Buchrieser J, Ozden S, Cheval J, Eloit M, Manuguerra JC, Gessain A, Brey PT, Fontanet A, Albert ML, Identification of a novel neuropathogenic Theiler’s murine encephalomyelitis virus, J. Virol. 2011 Jul;85(14):6893-905.

Polyakov P, Soussen C, Duan J, Duval JF, Brie D, Francius G, Automated force volume image processing for biological samples, PLoS ONE 2011;6(4):e18887.

Chopy D, Pothlichet J, Lafage M, Mégret F, Fiette L, Si-Tahar M, Lafon M, Ambivalent role of the innate immune response in rabies virus pathogenesis, J. Virol. 2011 Jul;85(13):6657-68.

Caudie C, Quittard Pinon A, Taravel D, Sivadon-Tardy V, Orlikowski D, Rozenberg F, Sharshar T, Raphaël JC, Gaillard JL, Preceding infections and anti-ganglioside antibody profiles assessed by a dot immunoassay in 306 French Guillain-Barré syndrome patients, J. Neurol. 2011 Nov;258(11):1958-64.

Courtin D, Milet J, Bertin G, Vafa M, Sarr JB, Watier L, Deloron P, Troye-Blomberg M, Garcia A, Migot-Nabias F, G6PD A-variant influences the antibody responses to Plasmodium falciparum MSP2, Infect. Genet. Evol. 2011 Aug;11(6):1287-92.

Saleh M, Lefevre S, Bourcier T, Prevost G, Gaucher D, Speeg-Schatz C, Jehl F, Ocular penetration of linezolid after oral administration in rabbits, J Ocul Pharmacol Ther 2011 Jun;27(3):243-6.

Van Kerkhove MD, Mounts AW, Mall S, Vandemaele KA, Chamberland M, dos Santos T, Fitzner J, Widdowson MA, Michalove J, Bresee J, Olsen SJ, Quick L, Baumeister E, Carlino LO, Savy V, Uez O, Owen R, Ghani F, Paterson B, Forde A, Fasce R, Torres G, Andrade W, Bustos P, Mora J, Gonzalez C, Olea A, Sotomayor V, Najera De Ferrari M, Burgos A, Hunt D, Huang QS, Jennings LC, Macfarlane M, Lopez LD, McArthur C, Cohen C, Archer B, Blumberg L, Cengimbo A, Makunga C, McAnerney J, Msimang V, Naidoo D, Puren A, Schoub B, Thomas J, Venter M, , Epidemiologic and virologic assessment of the 2009 influenza A (H1N1) pandemic on selected temperate countries in the Southern Hemisphere: Argentina, Australia, Chile, New Zealand and South Africa, Influenza Other Respir Viruses 2011 Nov;5(6):e487-98.

Caron F, du Châtelet IP, Leroy JP, Ruckly C, Blanchard M, Bohic N, Massy N, Morer I, Floret D, Delbos V, Hong E, Révillion M, Berthelot G, Lemée L, Deghmane AE, Bénichou J, Lévy-Bruhl D, Taha MK, From tailor-made to ready-to-wear meningococcal B vaccines: longitudinal study of a clonal meningococcal B outbreak, Lancet Infect Dis 2011 Jun;11(6):455-63.

Orlikowski D, Porcher R, Sivadon-Tardy V, Quincampoix JC, Raphaël JC, Durand MC, Sharshar T, Roussi J, Caudie C, Annane D, Rozenberg F, Leruez-Ville M, Gaillard JL, Gault E, Guillain-Barré syndrome following primary cytomegalovirus infection: a prospective cohort study, Clin. Infect. Dis. 2011 Apr;52(7):837-44.

Opinel A, Gachelin G, French 19th century contributions to the development of treatments for diphtheria, J R Soc Med 2011 Apr;104(4):173-8.

Huynh BT, Fievet N, Gbaguidi G, Borgella S, Mévo BG, Massougbodji A, Deloron P, Cot M, Malaria associated symptoms in pregnant women followed-up in Benin, Malar. J. 2011 Mar;10:72.

Roeder I, Loeffler M, Glauche I, , Towards a quantitative understanding of stem cell-niche interaction: experiments, models, and technologies, Blood Cells Mol. Dis. 2011 Apr;46(4):308-17.

Giles-Vernick T, Traoré A, Sirima SB, Malaria, environmental change, and an [corrected] historical epidemiology of childhood ‘cold fevers’: popular interpretations from southwestern Burkina Faso, Health Place 2011 May;17(3):836-42.

Van Kerkhove MD, Mounts AW, 2009 versus 2010 comparison of influenza activity in southern hemisphere temperate countries, Influenza Other Respir Viruses 2011 Nov;5(6):375-9.

De Benedictis P, De Battisti C, Dacheux L, Marciano S, Ormelli S, Salomoni A, Caenazzo ST, Lepelletier A, Bourhy H, Capua I, Cattoli G, Lyssavirus detection and typing using pyrosequencing, J. Clin. Microbiol. 2011 May;49(5):1932-8.

Harrison LH, Pelton SI, Wilder-Smith A, Holst J, Safadi MA, Vazquez JA, Taha MK, LaForce FM, von Gottberg A, Borrow R, Plotkin SA, The Global Meningococcal Initiative: recommendations for reducing the global burden of meningococcal disease, Vaccine 2011 Apr;29(18):3363-71.

Mir O, Adam J, Veyrie N, Chousterman B, Gaillard R, Gregory T, Yordanov Y, Berveiller P, Loulergue P, Accidental blood exposures among medical residents in Paris, France, Clin. Microbiol. Infect. 2011 Mar;17(3):464-6.

Lefevre S, Ruimy D, Jehl F, Neuville A, Robert P, Sordet C, Ehlinger M, Dietemann JL, Bierry G, Septic arthritis: monitoring with USPIO-enhanced macrophage MR imaging, Radiology 2011 Mar;258(3):722-8.

Clermont O, Olier M, Hoede C, Diancourt L, Brisse S, Keroudean M, Glodt J, Picard B, Oswald E, Denamur E, Animal and human pathogenic Escherichia coli strains share common genetic backgrounds, Infect. Genet. Evol. 2011 Apr;11(3):654-62.

Stevens RD, Neufeld KJ, Sharshar T, Delirium in the ICU: time to probe the hard questions, Crit Care 2011;15(1):118.

Cauchemez S, Bhattarai A, Marchbanks TL, Fagan RP, Ostroff S, Ferguson NM, Swerdlow D, , Role of social networks in shaping disease transmission during a community outbreak of 2009 H1N1 pandemic influenza, Proc. Natl. Acad. Sci. U.S.A. 2011 Feb;108(7):2825-30.

Vignier N, Esmat G, Elsharkawy A, Hassany M, Bonnard P, Delarocque-Astagneau E, Said M, Raafat R, El-Hoseiny M, Fontanet A, Mohamed MK, Vray M, Reproducibility of liver stiffness measurements in hepatitis C virus (HCV)-infected patients in Egypt, J. Viral Hepat. 2011 Jul;18(7):e358-65.

Van Kerkhove MD, Mumford E, Mounts AW, Bresee J, Ly S, Bridges CB, Otte J, Highly pathogenic avian influenza (H5N1): pathways of exposure at the animal-human interface, a systematic review, PLoS ONE 2011;6(1):e14582.

Pardos de la Gándara M, Seral C, Castillo García J, Rubio Calvo C, Weill FX, Prevalence and characterization of extended-spectrum beta-lactamases-producing Salmonella enterica isolates in Saragossa, Spain (2001-2008), Microb. Drug Resist. 2011 Jun;17(2):207-13.

Landier J, Akonde A, Pizzocolo C, Haidara I, Drabo M, Pizarro L, Fontanet A, Katlama C, Madec Y, Switch to second-line ART in West African routine care: incidence and reasons for switching, AIDS Care 2011 Jan;23(1):75-8.

Slaoui M, Fiette L, Histopathology procedures: from tissue sampling to histopathological evaluation, Methods Mol. Biol. 2011;691:69-82.

Fiette L, Slaoui M, Necropsy and sampling procedures in rodents, Methods Mol. Biol. 2011;691:39-67.

Mounier R, Chrétien F, Chazaud B, Blood vessels and the satellite cell niche, Curr. Top. Dev. Biol. 2011;96:121-38.

Cazorla C, Guigon A, Noel M, Quilici ML, Lacassin F, Fatal Vibrio vulnificus infection associated with eating raw oysters, New Caledonia, Emerging Infect. Dis. 2011 Jan;17(1):136-7.

Krida G, Diancourt L, Bouattour A, Rhim A, Chermiti B, Failloux AB, [Assessment of the risk of introduction to Tunisia of the Rift Valley fever virus by the mosquito Culex pipiens], Bull Soc Pathol Exot 2011 Oct;104(4):250-9.

Casrouge A, Decalf J, Ahloulay M, Lababidi C, Mansour H, Vallet-Pichard A, Mallet V, Mottez E, Mapes J, Fontanet A, Pol S, Albert ML, Evidence for an antagonist form of the chemokine CXCL10 in patients chronically infected with HCV, J. Clin. Invest. 2011 Jan;121(1):308-17.

Berthet N, Deletoile A, Passet V, Kennedy GC, Manuguerra JC, Cole ST, Brisse S, Reconstructed ancestral sequences improve pathogen identification using resequencing DNA microarrays, PLoS ONE 2010;5(12):e15243.

Djossou F, Bézian MC, Moynet D, Le Flèche-Matéos A, Malvy D, Corynebacterium mucifaciens in an immunocompetent patient with cavitary pneumonia., BMC Infect Dis 2010 Dec; 10(): 355.

Vanhomwegen J, Kwara A, Martin M, Gillani FS, Fontanet A, Mutungi P, Crellin J, Obaro S, Gosciminski M, Carter EJ, Rastogi N, Impact of immigration on the molecular epidemiology of tuberculosis in Rhode Island, J. Clin. Microbiol. 2011 Mar;49(3):834-44.

Soufia M, Plaze M, Gueguen B, Demigneux G, Olié JP, Gaillard R, Behavioral disinhibition with baclofen, J Clin Psychopharmacol 2010 Dec;30(6):759-60.

Dacheux L, Wacharapluesadee S, Hemachudha T, Meslin FX, Buchy P, Reynes JM, Bourhy H, More accurate insight into the incidence of human rabies in developing countries through validated laboratory techniques, PLoS Negl Trop Dis 2010 Nov;4(11):e765.

Lortholary O, Desnos-Ollivier M, Sitbon K, Fontanet A, Bretagne S, Dromer F, , , Recent exposure to caspofungin or fluconazole influences the epidemiology of candidemia: a prospective multicenter study involving 2,441 patients., Antimicrob Agents Chemother 2011 Feb; 55(2): 532-8.

Micol R, Tajahmady A, Lortholary O, Balkan S, Quillet C, Dousset JP, Chanroeun H, Madec Y, Fontanet A, Yazdanpanah Y, Cost-effectiveness of primary prophylaxis of AIDS associated cryptococcosis in Cambodia, PLoS ONE 2010;5(11):e13856.

Opinel A, Gachelin G, French 19th century contributions to the development of treatments for diphtheria. JLL Bulletin: Commentaries on the history of treatment evaluation, James Lind Library, Royal College of Medicine, Edimburg.

Weill FX, [Typhoid fever: facing the challenge of resistant strains], Med Sci (Paris) 2010 Nov;26(11):969-75.

Guillet M, Bille E, Lecuyer H, Taieb F, Masse V, Lanternier F, Lage-Ryke N, Talbi A, Degand N, Lortholary O, Nassif X, Zahar JR, [Epidemiology of patients harboring extended-spectrum beta-lactamase-producing enterobacteriaceae (ESBLE), on admission], Med Mal Infect 2010 Nov;40(11):632-6.

Quilici ML, Massenet D, Gake B, Bwalki B, Olson DM, Vibrio cholerae O1 variant with reduced susceptibility to ciprofloxacin, Western Africa, Emerging Infect. Dis. 2010 Nov;16(11):1804-5.

Talbi C, Lemey P, Suchard MA, Abdelatif E, Elharrak M, Nourlil J, Jalal N, Faouzi A, Echevarría JE, Vazquez Morón S, Rambaut A, Campiz N, Tatem AJ, Holmes EC, Bourhy H, Phylodynamics and human-mediated dispersal of a zoonotic virus, PLoS Pathog. 2010;6(10):e1001166.

Leclercq I, Berthet N, Batéjat C, Rousseaux C, Dickinson P, Old IG, Kong K, Kennedy GC, Cole ST, Manuguerra JC, , Use of consensus sequences for the design of high density resequencing microarrays: the influenza virus paradigm., BMC Genomics 2010 Oct; 11(): 586.

Taieb F, Méchaï F, Lefort A, Lanternier F, Bougnoux ME, Lortholary O, [Management of candidemia and invasive candidiasis], Rev Med Interne 2011 Mar;32(3):173-80.

Demarque MD, Nacerddine K, Neyret-Kahn H, Andrieux A, Danenberg E, Jouvion G, Bomme P, Hamard G, Romagnolo B, Terris B, Cumano A, Barker N, Clevers H, Dejean A, Sumoylation by Ubc9 regulates the stem cell compartment and structure and function of the intestinal epithelium in mice, Gastroenterology 2011 Jan;140(1):286-96.

Loulergue P, Gaillard R, Mir O, Interaction involving tadalafil and CYP3A4 inhibition by ritonavir, Scand. J. Infect. Dis. 2011 Mar;43(3):239-40.

Sangal V, Harbottle H, Mazzoni CJ, Helmuth R, Guerra B, Didelot X, Paglietti B, Rabsch W, Brisse S, Weill FX, Roumagnac P, Achtman M, Evolution and population structure of Salmonella enterica serovar Newport, J. Bacteriol. 2010 Dec;192(24):6465-76.

Moutailler S, Krida G, Madec Y, Bouloy M, Failloux AB, Replication of Clone 13, a naturally attenuated avirulent isolate of Rift Valley fever virus, in Aedes and Culex mosquitoes, Vector Borne Zoonotic Dis. 2010 Oct;10(7):681-8.

Siami S, Bailly-Salin J, Polito A, Porcher R, Blanchard A, Haymann JP, Laborde K, Maxime V, Boucly C, Carlier R, Annane D, Sharshar T, Osmoregulation of vasopressin secretion is altered in the postacute phase of septic shock, Crit. Care Med. 2010 Oct;38(10):1962-9.

Sharshar T, Polito A, Checinski A, Stevens RD, Septic-associated encephalopathy–everything starts at a microlevel, Crit Care 2010;14(5):199.

Wang W, Cavailler P, Ren P, Zhang J, Dong W, Yan H, Mardy S, Cailhol J, Buchy P, Sheng J, Fontanet A, Deubel V, Molecular monitoring of causative viruses in child acute respiratory infection in endemo-epidemic situations in Shanghai, J. Clin. Virol. 2010 Nov;49(3):211-8.

Ostertag A, Cohen-Solal M, Madec Y, Baudoin C, de Vernejoul MC, Bone changes in spouses having shared lifestyle for 40 years, Joint Bone Spine 2011 May;78(3):285-90.

de La Llave E, Lecoeur H, Besse A, Milon G, Prina E, Lang T, A combined luciferase imaging and reverse transcription polymerase chain reaction assay for the study of Leishmania amastigote burden and correlated mouse tissue transcript fluctuations, Cell. Microbiol. 2011 Jan;13(1):81-91.

Delisle E, Larrieu S, Simões J, Laylle N, De Pommerol M, Taha MK, Termignon JL, Parent du Châtelet I, Community outbreak of group B meningococcal disease in southwest France–December 2008 to September 2009, Euro Surveill. 2010 Sep;15(37).

Enache-Angoulvant A, Bourget M, Brisse S, Stockman-Pannier C, Diancourt L, François N, Rimek D, Fairhead C, Poulain D, Hennequin C, Multilocus microsatellite markers for molecular typing of Candida glabrata: application to analysis of genetic relationships between bloodstream and digestive system isolates, J. Clin. Microbiol. 2010 Nov;48(11):4028-34.

Bouglé A, Duranteau J, Benhamou D, [Haemodynamic monitoring or output cardiac monitoring?], Ann Fr Anesth Reanim 2010 Oct;29(10):743-4.

Bolt F, Cassiday P, Tondella ML, Dezoysa A, Efstratiou A, Sing A, Zasada A, Bernard K, Guiso N, Badell E, Rosso ML, Baldwin A, Dowson C, Multilocus sequence typing identifies evidence for recombination and two distinct lineages of Corynebacterium diphtheriae, J. Clin. Microbiol. 2010 Nov;48(11):4177-85.

Leclercq A, Clermont D, Bizet C, Grimont PAD, Le Flèche-Matéos A, Roche SM, Buchrieser C, Cadet-Daniel V, Le Monnier A, Lecuit M, Allerberger F, Listeria rocourtiae sp. nov., Int J Syst Evol Microbiol 2010 Sep; 60(Pt 9): 2210-2214.

Cassar O, Blondot ML, Mohanna S, Jouvion G, Bravo F, Maco V, Duprez R, Huerre M, Gotuzzo E, Gessain A, Human herpesvirus 8 genotype E in patients with Kaposi sarcoma, Peru, Emerging Infect. Dis. 2010 Sep;16(9):1459-62.

Huynh BT, Tual S, Turbelin C, Pelat C, Cecchi L, D'Amato G, Blanchon T, Annesi-Maesano I, Short-term effects of airborne pollens on asthma attacks as seen by general practitioners in the Greater Paris area, 2003-2007, Prim Care Respir J 2010 Sep;19(3):254-9.

Collard JM, Maman Z, Yacouba H, Djibo S, Nicolas P, Jusot JF, Rocourt J, Maitournam R, Increase in Neisseria meningitidis serogroup W135, Niger, 2010., Emerg Infect Dis 2010 Sep; 16(9): 1496-8.

Robert-Pillot A, Copin S, Gay M, Malle P, Quilici ML, Total and pathogenic Vibrio parahaemolyticus in shrimp: fast and reliable quantification by real-time PCR, Int. J. Food Microbiol. 2010 Oct;143(3):190-7.

Del Cul A, Gaillard R, Jardri R, Fossati P, [Hallucinations, consciousness and psychosis], Encephale 2010 Sep;36(4):348-54.

Blom-Potar MC, Chamond N, Cosson A, Jouvion G, Droin-Bergère S, Huerre M, Minoprio P, Trypanosoma vivax infections: pushing ahead with mouse models for the study of Nagana. II. Immunobiological dysfunctions, PLoS Negl Trop Dis 2010;4(8).

Chamond N, Cosson A, Blom-Potar MC, Jouvion G, D'Archivio S, Medina M, Droin-Bergère S, Huerre M, Goyard S, Minoprio P, Trypanosoma vivax infections: pushing ahead with mouse models for the study of Nagana. I. Parasitological, hematological and pathological parameters, PLoS Negl Trop Dis 2010;4(8):e792.

Pignato S, Coniglio MA, Faro G, Lefevre M, Weill FX, Giammanco G, Molecular epidemiology of ampicillin resistance in Salmonella spp. and Escherichia coli from wastewater and clinical specimens, Foodborne Pathog. Dis. 2010 Aug;7(8):945-51.

Polito A, Lorin de la Grandmaison G, Mansart A, Louiset E, Lefebvre H, Sharshar T, Annane D, Human and experimental septic shock are characterized by depletion of lipid droplets in the adrenals, Intensive Care Med 2010 Nov;36(11):1852-8.

Deghmane AE, Parent du Chatelet I, Szatanik M, Hong E, Ruckly C, Giorgini D, Lévy-Bruhl D, Alonso JM, Taha MK, , Emergence of new virulent Neisseria meningitidis serogroup C sequence type 11 isolates in France., J Infect Dis 2010 Jul; 202(2): 247-50.

Milet J, Nuel G, Watier L, Courtin D, Slaoui Y, Senghor P, Migot-Nabias F, Gaye O, Garcia A, Genome wide linkage study, using a 250K SNP map, of Plasmodium falciparum infection and mild malaria attack in a Senegalese population, PLoS ONE 2010 Jul;5(7):e11616.

Larrous F, Gholami A, Mouhamad S, Estaquier J, Bourhy H, Two overlapping domains of a lyssavirus matrix protein that acts on different cell death pathways, J. Virol. 2010 Oct;84(19):9897-906.

Petsaris O, Nousbaum JB, Quilici ML, Le Coadou G, Payan C, Abalain ML, Non-O1, non-O139 Vibrio cholerae bacteraemia in a cirrhotic patient, J. Med. Microbiol. 2010 Oct;59(Pt 10):1260-2.

Dacheux L, Berthet N, Dissard G, Holmes EC, Delmas O, Larrous F, Guigon G, Dickinson P, Faye O, Sall AA, Old IG, Kong K, Kennedy GC, Manuguerra JC, Cole ST, Caro V, Gessain A, Bourhy H, Application of broad-spectrum resequencing microarray for genotyping rhabdoviruses, J. Virol. 2010 Sep;84(18):9557-74.

Taha MK, Hedberg ST, Szatanik M, Hong E, Ruckly C, Abad R, Bertrand S, Carion F, Claus H, Corso A, Enríquez R, Heuberger S, Hryniewicz W, Jolley KA, Kriz P, Mollerach M, Musilek M, Neri A, Olcén P, Pana M, Skoczynska A, Sorhouet Pereira C, Stefanelli P, Tzanakaki G, Unemo M, Vázquez JA, Vogel U, Wasko I, , Multicenter study for defining the breakpoint for rifampin resistance in Neisseria meningitidis by rpoB sequencing., Antimicrob Agents Chemother 2010 Sep; 54(9): 3651-8.

Levy C, Taha MK, Weil Olivier C, Quinet B, Lecuyer A, Alonso JM, Aujard Y, Bingen E, Cohen R, , Association of meningococcal phenotypes and genotypes with clinical characteristics and mortality of meningitis in children, Pediatr. Infect. Dis. J. 2010 Jul;29(7):618-23.

Lardon Z, Watier L, Brunet A, Bernède C, Goudal M, Dacheux L, Rotivel Y, Guillemot D, Bourhy H, Imported episodic rabies increases patient demand for and physician delivery of antirabies prophylaxis, PLoS Negl Trop Dis 2010 Jun;4(6):e723.

Okagaki LH, Strain AK, Nielsen JN, Charlier C, Baltes NJ, Chrétien F, Heitman J, Dromer F, Nielsen K, Cryptococcal cell morphology affects host cell interactions and pathogenicity, PLoS Pathog. 2010;6(6):e1000953.

Martinez V, Fletcher D, Martin F, Orlikowski D, Sharshar T, Chauvin M, Bouhassira D, Attal N, Small fibre impairment predicts neuropathic pain in Guillain-Barré syndrome, Pain 2010 Oct;151(1):53-60.

Bone A, Noel H, Le Hello S, Pihier N, Danan C, Raguenaud ME, Salah S, Bellali H, Vaillant V, Weill FX, Jourdan-da Silva N, Nationwide outbreak of Salmonella enterica serotype 4,12:i:- infections in France, linked to dried pork sausage, March-May 2010, Euro Surveill. 2010 Jun;15(24).

Clavel-Chapelon F, Guillas G, Tondeur L, Kernaleguen C, Boutron-Ruault MC, Risk of differentiated thyroid cancer in relation to adult weight, height and body shape over life: the French E3N cohort, Int. J. Cancer 2010 Jun;126(12):2984-90.

Olivieri BP, Vasconcellos R, Nóbrega A, Minoprio P, Kaveri SV, Araújo-Jorge TC, Intravenous immunoglobulin increases survival time in the acute phase of experimental Chagas disease, Parasite Immunol. 2010 Jun;32(6):464-9.

Van Kerkhove MD, Asikainen T, Becker NG, Bjorge S, Desenclos JC, dos Santos T, Fraser C, Leung GM, Lipsitch M, Longini IM, McBryde ES, Roth CE, Shay DK, Smith DJ, Wallinga J, White PJ, Ferguson NM, Riley S, , Studies needed to address public health challenges of the 2009 H1N1 influenza pandemic: insights from modeling, PLoS Med. 2010 Jun;7(6):e1000275.

Bierry G, Jehl F, Neuville A, Lefevre S, Robert P, Kremer S, Dietemann JL, MRI of macrophages in infectious knee synovitis, AJR Am J Roentgenol 2010 Jun;194(6):W521-6.

Taha MK, Deghmane AE, Impact of changing epidemiology on vaccination strategies in Africa, Future Microbiol 2010 Jun;5(6):837-9.

Vandenberg O, Nyarukweba DZ, Ndeba PM, Hendriksen RS, Barzilay EJ, Schirvel C, Bisimwa BB, Collard JM, Aidara Kane A, Aarestrup FM, Microbiologic and clinical features of Salmonella species isolated from bacteremic children in eastern Democratic Republic of Congo., Pediatr Infect Dis J 2010 Jun; 29(6): 504-10.

Song Y, Roumagnac P, Weill FX, Wain J, Dolecek C, Mazzoni CJ, Holt KE, Achtman M, A multiplex single nucleotide polymorphism typing assay for detecting mutations that result in decreased fluoroquinolone susceptibility in Salmonella enterica serovars Typhi and Paratyphi A, J. Antimicrob. Chemother. 2010 Aug;65(8):1631-41.

Kapetanovic R, Jouvion G, Fitting C, Parlato M, Blanchet C, Huerre M, Cavaillon JM, Adib-Conquy M, Contribution of NOD2 to lung inflammation during Staphylococcus aureus-induced pneumonia, Microbes Infect. 2010 Sep;12(10):759-67.

Hollingsworth TD, Laeyendecker O, Shirreff G, Donnelly CA, Serwadda D, Wawer MJ, Kiwanuka N, Nalugoda F, Collinson-Streng A, Ssempijja V, Hanage WP, Quinn TC, Gray RH, Fraser C, HIV-1 transmitting couples have similar viral load set-points in Rakai, Uganda., PLoS Pathog 2010 May; 6(5): e1000876.

Czeher C, Labbo R, Vieville G, Arzika I, Bogreau H, Rogier C, Diancourt L, Brisse S, Ariey F, Duchemin JB, Population genetic structure of Anopheles gambiae and Anopheles arabiensis in Niger, J. Med. Entomol. 2010 May;47(3):355-66.

Sivadon-Tardy V, Orlikowski D, Porcher R, Ronco E, Caudie C, Roussi J, Fauchère JL, Mégraud F, Tabor H, Sharshar T, Annane D, Raphaël JC, Gaillard JL, Detection of Campylobacter jejuni by culture and real-time PCR in a French cohort of patients with Guillain-Barre syndrome, J. Clin. Microbiol. 2010 Jun;48(6):2278-81.

Cavézian C, Vilayphonh M, de Agostini M, Vasseur V, Watier L, Kazandjian S, Laloum L, Chokron S, Assessment of visuo-attentional abilities in young children with or without visual disorder: toward a systematic screening in the general population, Res Dev Disabil 2010 Sep-Oct;31(5):1102-8.

Melki MT, Saïdi H, Dufour A, Olivo-Marin JC, Gougeon ML, Escape of HIV-1-infected dendritic cells from TRAIL-mediated NK cell cytotoxicity during NK-DC cross-talk–a pivotal role of HMGB1, PLoS Pathog. 2010 Apr;6(4):e1000862.

Ibrahim-Granet O, Jouvion G, Hohl TM, Droin-Bergère S, Philippart F, Kim OY, Adib-Conquy M, Schwendener R, Cavaillon JM, Brock M, In vivo bioluminescence imaging and histopathopathologic analysis reveal distinct roles for resident and recruited immune effector cells in defense against invasive aspergillosis, BMC Microbiol. 2010;10:105.

Bourhy H, Dacheux L, Ribadeau-Dumas F, [The use of passive rabies immunotherapy: from the past to the future], Biol Aujourdhui 2010;204(1):71-80.

Diancourt L, Passet V, Nemec A, Dijkshoorn L, Brisse S, The population structure of Acinetobacter baumannii: expanding multiresistant clones from an ancestral susceptible genetic pool, PLoS ONE 2010;5(4):e10034.

Lefèvre S, Cocquerelle V, Riegel P, Scheftel JM, Jaulhac B, Jehl F, [Comparative study of Vitek-2™ AIX versus Vitek-2™ PC: phenotypic resistance of enterobacteriaceae to β-lactams], Pathol. Biol. 2012 Apr;60(2):78-83.

Héry-Arnaud G, Doloy A, Ansart S, Le Lay G, Le Flèche-Matéos A, Seizeur R, Garré M, Payan C, Bouvet A, Globicatella sanguinis meningitis associated with human carriage., J Clin Microbiol 2010 Apr; 48(4): 1491-3.

Vezzulli L, Previati M, Pruzzo C, Marchese A, Bourne DG, Cerrano C,, Vibrio infections triggering mass mortality events in a warming Mediterranean Sea, Environ. Microbiol. 2010 Jul;12(7):2007-19.

Sharshar T, Bastuji-Garin S, De Jonghe B, Stevens RD, Polito A, Maxime V, Rodriguez P, Cerf C, Outin H, Touraine P, Laborde K, Hormonal status and ICU-acquired paresis in critically ill patients, Intensive Care Med 2010 Aug;36(8):1318-26.

Mousson L, Martin E, Zouache K, Madec Y, Mavingui P, Failloux AB, Wolbachia modulates Chikungunya replication in Aedes albopictus, Mol. Ecol. 2010 May;19(9):1953-64.

Opatowski L, Mandel J, Varon E, Boëlle PY, Temime L, Guillemot D, Antibiotic dose impact on resistance selection in the community: a mathematical model of beta-lactams and Streptococcus pneumoniae dynamics, Antimicrob. Agents Chemother. 2010 Jun;54(6):2330-7.

Zahar JR, Lanternier F, Mechai F, Filley F, Taieb F, Mainot EL, Descamps P, Corriol O, Ferroni A, Bille E, Nassif X, Lortholary O, Duration of colonisation by Enterobacteriaceae producing extended-spectrum beta-lactamase and risk factors for persistent faecal carriage, J. Hosp. Infect. 2010 May;75(1):76-8.

Martin E, Moutailler S, Madec Y, Failloux AB, Differential responses of the mosquito Aedes albopictus from the Indian Ocean region to two chikungunya isolates, BMC Ecol. 2010;10:8.

Gaillard R, Loo H, Olie JP, [Mental pain: is it a symptom?], Bull. Acad. Natl. Med. 2010 Mar;194(3):567-78; discussion 578-81.

Saleh M, Jehl F, Dory A, Lefevre S, Prevost G, Gaucher D, Sauer A, Speeg-Schatz C, Bourcier T, Ocular penetration of topically applied linezolid in a rabbit model, J Cataract Refract Surg 2010 Mar;36(3):488-92.

Bertrand S, Dierick K, Heylen K, De Baere T, Pochet B, Robesyn E, Lokietek S, Van Meervenne E, Imberechts H, De Zutter L, Collard JM, Lessons learned from the management of a national outbreak of Salmonella ohio linked to pork meat processing and distribution., J Food Prot 2010 Mar; 73(3): 529-34.

Pawlicki-Jullian N, Courtois B, Pillon M, Lesur D, Le Flèche-Mateos A, Laberche JC, Goncharova N, Courtois J, Exopolysaccharide production by nitrogen-fixing bacteria within nodules of Medicago plants exposed to chronic radiation in the Chernobyl exclusion zone., Res Microbiol 2010 Mar; 161(2): 101-8.

Shimakawa Y, Camélique O, Ariyoshi K, , Outbreak of chickenpox in a refugee camp of northern Thailand., Confl Health 2010 Feb; 4(): 4.

Tiembré I, Dagnan S, Douba A, Adjogoua EV, Bourhy H, Dacheux L, Kouassi L, Dosso M, Odehouri-Koudou P, [Epidemiologic monitoring of human rabies in an endemic canine rabies area in the Ivory Coast], Med Mal Infect 2010 Jul;40(7):398-403.

Schilte C, Couderc T, Chretien F, Sourisseau M, Gangneux N, Guivel-Benhassine F, Kraxner A, Tschopp J, Higgs S, Michault A, Arenzana-Seisdedos F, Colonna M, Peduto L, Schwartz O, Lecuit M, Albert ML, , Type I IFN controls chikungunya virus via its action on nonhematopoietic cells., J Exp Med 2010 Feb; 207(2): 429-42.

Yde M, Botteldoorn N, Bertrand S, Collard J, Dierick K, Microbiological and molecular investigation of an increase of human listeriosis in Belgium, 2006-2007., Euro Surveill 2010 Feb; 15(6): .

Pons-Salort M, Letort V, Favre M, Heard I, Dervaux B, Opatowski L, Guillemot D., Exploring individual HPV coinfections is essential to predict HPV-vaccination impact on genotype distribution: a model-based approach, Vaccine. 2013 Feb 6;31(8):1238-45.

El Tahchy A, Boisbrun M, Ptak A, Dupire F, Chrétien F, Henry M, Chapleur Y, Laurain-Mattar D, New method for the study of Amaryllidaceae alkaloid biosynthesis using biotransformation of deuterium-labeled precursor in tissue cultures, Acta Biochim. Pol. 2010;57(1):75-82.

Brigitte M, Schilte C, Plonquet A, Baba-Amer Y, Henri A, Charlier C, Tajbakhsh S, Albert M, Gherardi RK, Chrétien F, Muscle resident macrophages control the immune cell reaction in a mouse model of notexin-induced myoinjury, Arthritis Rheum. 2010 Jan;62(1):268-79.

Juffroy O, Bugault F, Lambotte O, Landires I, Viard JP, Niel L, Fontanet A, Delfraissy JF, Thèze J, Chakrabarti LA, Dual mechanism of impairment of interleukin-7 (IL-7) responses in human immunodeficiency virus infection: decreased IL-7 binding and abnormal activation of the JAK/STAT5 pathway, J. Virol. 2010 Jan;84(1):96-108.

Germanaud D, Derache A, Traore M, Madec Y, Toure S, Dicko F, Coulibaly H, Traore M, Sylla M, Calvez V, Marcelin AG, Level of viral load and antiretroviral resistance after 6 months of non-nucleoside reverse transcriptase inhibitor first-line treatment in HIV-1-infected children in Mali, J. Antimicrob. Chemother. 2010 Jan;65(1):118-24.

Segeral O, Madec Y, Ban B, Ouk V, Hak CR, Le Tiec C, Nerrienet E, Goujard C, Taburet AM, Delfraissy JF, Fontanet A, Simplified Assessment of Antiretroviral Adherence and Prediction of Virological Efficacy in HIV-Infected Patients in Cambodia, AIDS Res Treat 2010;2010:142076.

Cauchemez S, Donnelly CA, Reed C, Ghani AC, Fraser C, Kent CK, Finelli L, Ferguson NM, Household transmission of 2009 pandemic influenza A (H1N1) virus in the United States, N. Engl. J. Med. 2009 Dec;361(27):2619-27.

Lecoeur H, Buffet PA, Milon G, Lang T, Early curative applications of the aminoglycoside WR279396 on an experimental Leishmania major-loaded cutaneous site do not impair the acquisition of immunity, Antimicrob. Agents Chemother. 2010 Mar;54(3):984-90.

Mueller JE, Gessner BD, A hypothetical explanatory model for meningococcal meningitis in the African meningitis belt, Int. J. Infect. Dis. 2010 Jul;14(7):e553-9.

Njanpop Lafourcade BM, Sanou O, van der Linden M, Levina N, Karanfil M, Yaro S, Tamekloe TA, Mueller JE, Serotyping pneumococcal meningitis cases in the African meningitis belt by use of multiplex PCR with cerebrospinal fluid, J. Clin. Microbiol. 2010 Feb;48(2):612-4.

Taieb F, Le Monnier A, Bille E, Lanternier F, Mechai F, Ribadeau-Dumas F, Maenulein E, Forge C, Corriol O, Nassif X, Lortholary O, Zahar JR, [Optimized clinical use of vancomycin, a prospective observational study in a Paris teaching hospital], Med Mal Infect 2010 May;40(5):273-8.

Coutinho L, Ferreira MA, Cosson A, Batista MM, Batista Dda G, Minoprio P, Degrave WM, Berneman A, Soeiro Mde N, Inhibition of Trypanosoma cruzi proline racemase affects host-parasite interactions and the outcome of in vitro infection, Mem. Inst. Oswaldo Cruz 2009 Dec;104(8):1055-62.

Coutinho L, Ferreira MA, Cosson A, Batista MM, Batista Dda G, Minoprio P, Degrave WM, Berneman A, Soeiro Mde N, Inhibition of Trypanosoma cruzi proline racemase affects host-parasite interactions and the outcome of in vitro infection, Mem. Inst. Oswaldo Cruz 2009 Dec;104(8):1055-62.

Akrout N, Sharshar T, Annane D, Mechanisms of brain signaling during sepsis, Curr Neuropharmacol 2009 Dec;7(4):296-301.

Sharshar T, Bastuji-Garin S, Stevens RD, Durand MC, Malissin I, Rodriguez P, Cerf C, Outin H, De Jonghe B, , Presence and severity of intensive care unit-acquired paresis at time of awakening are associated with increased intensive care unit and hospital mortality, Crit. Care Med. 2009 Dec;37(12):3047-53.

Assenberg R, Delmas O, Ren J, Vidalain PO, Verma A, Larrous F, Graham SC, Tangy F, Grimes JM, Bourhy H, Structure of the nucleoprotein binding domain of Mokola virus phosphoprotein, J. Virol. 2010 Jan;84(2):1089-96.

Sonneville R, Guidoux C, Barrett L, Viltart O, Mattot V, Polito A, Siami S, de la Grandmaison GL, Blanchard A, Singer M, Annane D, Gray F, Brouland JP, Sharshar T, Vasopressin synthesis by the magnocellular neurons is different in the supraoptic nucleus and in the paraventricular nucleus in human and experimental septic shock, Brain Pathol. 2010 May;20(3):613-22.

Stevens RD, Hart N, de Jonghe B, Sharshar T, Weakness in the ICU: a call to action, Crit Care 2009;13(6):1002.

Doublet B, Robin F, Casin I, Fabre L, Le Fleche A, Bonnet R, Weill FX, Molecular and biochemical characterization of the natural chromosome-encoded class A beta-lactamase from Pseudomonas luteola, Antimicrob. Agents Chemother. 2010 Jan;54(1):45-51.

Jory A, Le Roux I, Gayraud-Morel B, Rocheteau P, Cohen-Tannoudji M, Cumano A, Tajbakhsh S, Numb promotes an increase in skeletal muscle progenitor cells in the embryonic somite, Stem Cells 2009 Nov;27(11):2769-80.

Piris-Gimenez A, Corre JP, Jouvion G, Candela T, Khun H, Goossens PL, Encapsulated Bacillus anthracis interacts closely with liver endothelium, J. Infect. Dis. 2009 Nov;200(9):1381-9.

Temime L, Opatowski L, Pannet Y, Brun-Buisson C, Boëlle PY, Guillemot D., Peripatetic health-care workers as potential superspreaders, Proc Natl Acad Sci U S A. 2009 Oct 27;106(43):18420-5.

Van Kerkhove MD, Vong S, Guitian J, Holl D, Mangtani P, San S, Ghani AC, Poultry movement networks in Cambodia: implications for surveillance and control of highly pathogenic avian influenza (HPAI/H5N1), Vaccine 2009 Oct;27(45):6345-52.

Weill FX, Le Hello S, Clerc M, Scribans C, de Barbeyrac B, Serological reactivity and bacterial genotypes in Chlamydia trachomatis urogenital infections in Guadeloupe, French West Indies, Sex Transm Infect 2010 Apr;86(2):101-5.

Guibourdenche M, Roggentin P, Mikoleit M, Fields PI, Bockemühl J, Grimont PA, Weill FX, Supplement 2003-2007 (No. 47) to the White-Kauffmann-Le Minor scheme, Res. Microbiol. 2010 Jan-Feb;161(1):26-9.

Andreini M, Taillefumier C, Chrétien F, Thery V, Chapleur Y, Synthesis and solution conformation of homo-beta-peptides consisting of N-mannofuranosyl-3-ulosonic acids, J. Org. Chem. 2009 Oct;74(20):7651-9.

Polyakov P, Rossinsky E, Wiegand S, Study of the soret effect in hydrocarbon chain/aromatic compound mixtures, J Phys Chem B 2009 Oct;113(40):13308-12.

Iacobone E, Bailly-Salin J, Polito A, Friedman D, Stevens RD, Sharshar T, Sepsis-associated encephalopathy and its differential diagnosis, Crit. Care Med. 2009 Oct;37(10 Suppl):S331-6.

de Jonghe B, Lacherade JC, Sharshar T, Outin H, Intensive care unit-acquired weakness: risk factors and prevention, Crit. Care Med. 2009 Oct;37(10 Suppl):S309-15.

Bouchrif B, Le Hello S, Pardos M, Karraouan B, Perrier-Gros-Claude JD, Ennaji MM, Timinouni M, Weill FX, Ceftazidime-resistant Salmonella enterica, Morocco, Emerging Infect. Dis. 2009 Oct;15(10):1693-5.

Paez Jimenez A, Mohamed MK, Eldin NS, Seif HA, El Aidi S, Sultan Y, Elsaid N, Rekacewicz C, El-Hoseiny M, El-Daly M, Abdel-Hamid M, Fontanet A, Injection drug use is a risk factor for HCV infection in urban Egypt, PLoS ONE 2009;4(9):e7193.

Lecoeur H, de La Llave E, Osorio Y Fortéa J, Goyard S, Kiefer-Biasizzo H, Balazuc AM, Milon G, Prina E, Lang T, Sorting of Leishmania-bearing dendritic cells reveals subtle parasite-induced modulation of host-cell gene expression, Microbes Infect. 2010 Jan;12(1):46-54.

Tanne A, Ma B, Boudou F, Tailleux L, Botella H, Badell E, Levillain F, Taylor ME, Drickamer K, Nigou J, Dobos KM, Puzo G, Vestweber D, Wild MK, Marcinko M, Sobieszczuk P, Stewart L, Lebus D, Gicquel B, Neyrolles O, A murine DC-SIGN homologue contributes to early host defense against Mycobacterium tuberculosis, J. Exp. Med. 2009 Sep;206(10):2205-20.

Ly S, Buchy P, Heng NY, Ong S, Chhor N, Bourhy H, Vong S, Rabies situation in Cambodia, PLoS Negl Trop Dis 2009;3(9):e511.

Lang T, Lecoeur H, Prina E, Imaging Leishmania development in their host cells, Trends Parasitol. 2009 Oct;25(10):464-73.

Deghmane AE, Alonso JM, Taha MK, , Emerging drugs for acute bacterial meningitis., Expert Opin Emerg Drugs 2009 Sep; 14(3): 381-93.

Rameix-Welti MA, Zarantonelli ML, Giorgini D, Ruckly C, Marasescu M, van der Werf S, Alonso JM, Naffakh N, Taha MK, , Influenza A virus neuraminidase enhances meningococcal adhesion to epithelial cells through interaction with sialic acid-containing meningococcal capsules., Infect Immun 2009 Sep; 77(9): 3588-95.

Abou-Khalil R, Le Grand F, Pallafacchina G, Valable S, Authier FJ, Rudnicki MA, Gherardi RK, Germain S, Chretien F, Sotiropoulos A, Lafuste P, Montarras D, Chazaud B, Autocrine and paracrine angiopoietin 1/Tie-2 signaling promotes muscle satellite cell self-renewal, Cell Stem Cell 2009 Sep;5(3):298-309.

Gaillard R, [Comparative efficacy and acceptability of new-generation antidepressants. Synthesis meta-analysis Cipriani], Encephale 2009 Oct;35(5):499-504.

Micol R, Buchy P, Guerrier G, Duong V, Ferradini L, Dousset JP, Guerin PJ, Balkan S, Galimand J, Chanroeun H, Lortholary O, Rouzioux C, Fontanet A, Leruez-Ville M, Prevalence, risk factors, and impact on outcome of cytomegalovirus replication in serum of Cambodian HIV-infected patients (2004-2007), J. Acquir. Immune Defic. Syndr. 2009 Aug;51(4):486-91.

Strauss J, Aboab J, Rottmann M, Porcher R, Polito A, Ikka L, Durand MC, Orlikowski D, Devaux C, Lofaso F, Annane D, Gaillard JL, Sharshar T, Plasma cortisol levels in Guillain-Barré syndrome, Crit. Care Med. 2009 Aug;37(8):2436-40.

Murphy E, Andrew L, Lee KL, Dilts DA, Nunez L, Fink PS, Ambrose K, Borrow R, Findlow J, Taha MK, Deghmane AE, Kriz P, Musilek M, Kalmusova J, Caugant DA, Alvestad T, Mayer LW, Sacchi CT, Wang X, Martin D, von Gottberg A, du Plessis M, Klugman KP, Anderson AS, Jansen KU, Zlotnick GW, Hoiseth SK, Sequence diversity of the factor H binding protein vaccine candidate in epidemiologically relevant strains of serogroup B Neisseria meningitidis, J. Infect. Dis. 2009 Aug;200(3):379-89.

Van Kerkhove MD, Ly S, Guitian J, Holl D, San S, Mangtani P, Ghani A, Vong S, Changes in poultry handling behavior and poultry mortality reporting among rural Cambodians in areas affected by HPAI/H5N1, PLoS ONE 2009;4(7):e6466.

Chassin C, Picardeau M, Goujon JM, Bourhy P, Quellard N, Darche S, Badell E, d'Andon MF, Winter N, Lacroix-Lamandé S, Buzoni-Gatel D, Vandewalle A, Werts C, TLR4- and TLR2-mediated B cell responses control the clearance of the bacterial pathogen, Leptospira interrogans, J. Immunol. 2009 Aug;183(4):2669-77.

Dellatolas G, Watier L, Le Normand MT, Lubart T, Chevrie-Muller C, Rhythm reproduction in kindergarten, reading performance at second grade, and developmental dyslexia theories, Arch Clin Neuropsychol 2009 Sep;24(6):555-63.

Coatnoan N, Berneman A, Chamond N, Minoprio P, Proline racemases: insights into Trypanosoma cruzi peptides containing D-proline, Mem. Inst. Oswaldo Cruz 2009 Jul;104 Suppl 1:295-300.

Débarbouillé M, Dramsi S, Dussurget O, Nahori MA, Vaganay E, Jouvion G, Cozzone A, Msadek T, Duclos B, , Characterization of a serine/threonine kinase involved in virulence of Staphylococcus aureus., J Bacteriol 2009 Jul; 191(13): 4070-81.

Mouaffak F, Gaillard R, Burgess E, Zaki H, Olié JP, Krebs MO, Clozapine-induced serositis: review of its clinical features, pathophysiology and management strategies, Clin Neuropharmacol 2009 Jul-Aug;32(4):219-23.

Hendriksen RS, Mikoleit M, Carlson VP, Karlsmose S, Vieira AR, Jensen AB, Seyfarth AM, DeLong SM, Weill FX, Lo Fo Wong DM, Angulo FJ, Wegener HC, Aarestrup FM, WHO Global Salm-Surv external quality assurance system for serotyping of Salmonella isolates from 2000 to 2007, J. Clin. Microbiol. 2009 Sep;47(9):2729-36.

Gachelin G, Opinel A, The reception by French physicians of Chagas’ discovery of Trypanosoma cruzi and American trypanosomiasis (1909-1925), Hist Cienc Saude Manguinhos 2009 Jul;16 Suppl 1:35-56.

Bonmarin I, Guiso N, Le Flèche-Matéos A, Patey O, Patrick AD, Levy-Bruhl D, Diphtheria: a zoonotic disease in France?, Vaccine 2009 Jun; 27(31): 4196-200.

Vezzulli L, Pezzati E, Moreno M, Fabiano M, Pane L, Pruzzo C,, Benthic ecology of Vibrio spp. and pathogenic Vibrio species in a coastal Mediterranean environment (La Spezia Gulf, Italy), Microb. Ecol. 2009 Nov;58(4):808-18.

Vong S, Ly S, Van Kerkhove MD, Achenbach J, Holl D, Buchy P, Sorn S, Seng H, Uyeki TM, Sok T, Katz JM, Risk factors associated with subclinical human infection with avian influenza A (H5N1) virus–Cambodia, 2006, J. Infect. Dis. 2009 Jun;199(12):1744-52.

Sabuncu E, David J, Bernède-Bauduin C, Pépin S, Leroy M, Boëlle PY, Watier L, Guillemot D, Significant reduction of antibiotic use in the community after a nationwide campaign in France, 2002-2007, PLoS Med. 2009 Jun;6(6):e1000084.

Poncet S, Milohanic E, Mazé A, Nait Abdallah J, Aké F, Larribe M, Deghmane AE, Taha MK, Dozot M, De Bolle X, Letesson JJ, Deutscher J, Correlations between carbon metabolism and virulence in bacteria, Contrib Microbiol 2009;16:88-102.

Fisher IS, Jourdan-Da Silva N, Hächler H, Weill FX, Schmid H, Danan C, Kérouanton A, Lane CR, Dionisi AM, Luzzi I, Human infections due to Salmonella Napoli: a multicountry, emerging enigma recognized by the Enter-net international surveillance network, Foodborne Pathog. Dis. 2009 Jun;6(5):613-9.

Skoczynska A, Ruckly C, Hong E, Taha MK, Molecular characterization of resistance to rifampicin in clinical isolates of Neisseria meningitidis, Clin. Microbiol. Infect. 2009 Dec;15(12):1178-81.

Fraser C, Donnelly CA, Cauchemez S, Hanage WP, Van Kerkhove MD, Hollingsworth TD, Griffin J, Baggaley RF, Jenkins HE, Lyons EJ, Jombart T, Hinsley WR, Grassly NC, Balloux F, Ghani AC, Ferguson NM, Rambaut A, Pybus OG, Lopez-Gatell H, Alpuche-Aranda CM, Chapela IB, Zavala EP, Guevara DM, Checchi F, Garcia E, Hugonnet S, Roth C, , Pandemic potential of a strain of influenza A (H1N1): early findings, Science 2009 Jun;324(5934):1557-61.

Paez Jimenez A, El-Din NS, El-Hoseiny M, El-Daly M, Abdel-Hamid M, El Aidi S, Sultan Y, El-Sayed N, Mohamed MK, Fontanet A, Community transmission of hepatitis B virus in Egypt: results from a case-control study in Greater Cairo, Int J Epidemiol 2009 Jun;38(3):757-65.

Deghmane AE, Veckerlé C, Giorgini D, Hong E, Ruckly C, Taha MK, , Differential modulation of TNF-alpha-induced apoptosis by Neisseria meningitidis., PLoS Pathog 2009 May; 5(5): e1000405.

Pachlopnik Schmid J, Ho CH, Chrétien F, Lefebvre JM, Pivert G, Kosco-Vilbois M, Ferlin W, Geissmann F, Fischer A, de Saint Basile G, Neutralization of IFNgamma defeats haemophagocytosis in LCMV-infected perforin- and Rab27a-deficient mice, EMBO Mol Med 2009 May;1(2):112-24.

Bouglé A, Annane D, [Effect of insulin: from the cell to the total body], Ann Fr Anesth Reanim 2009 May;28(5):e193-9.

Vrints M, Mairiaux E, Van Meervenne E, Collard JM, Bertrand S, Surveillance of antibiotic susceptibility patterns among Shigella sonnei strains isolated in Belgium during the 18-year period 1990 to 2007., J Clin Microbiol 2009 May; 47(5): 1379-85.

Madec Y, Szumilin E, Genevier C, Ferradini L, Balkan S, Pujades M, Fontanet A, Weight gain at 3 months of antiretroviral therapy is strongly associated with survival: evidence from two developing countries, AIDS 2009 Apr;23(7):853-61.

Bourhy H, Goudal M, Mailles A, Sadkowska-Todys M, Dacheux L, Zeller H, Is there a need for anti-rabies vaccine and immunoglobulins rationing in Europe?, Euro Surveill. 2009 Apr;14(13).

Brisse S, Fevre C, Passet V, Issenhuth-Jeanjean S, Tournebize R, Diancourt L, Grimont P, Virulent clones of Klebsiella pneumoniae: identification and evolutionary scenario based on genomic and phenotypic characterization, PLoS ONE 2009;4(3):e4982.

Gaillard R, Dehaene S, Adam C, Clémenceau S, Hasboun D, Baulac M, Cohen L, Naccache L, Converging intracranial markers of conscious access, PLoS Biol. 2009 Mar;7(3):e61.

Fabre L, Delauné A, Espié E, Nygard K, Pardos de la Gandara M, Polomack L, Guesnier F, Galimand M, Lassen J, Weill FX, Chromosomal integration of the extended-spectrum beta-lactamase gene blaCTX-M-15 in Salmonella enterica serotype Concord isolates from internationally adopted children, Antimicrob. Agents Chemother. 2009 05;53(5):1808-16.

Doublet B, Granier SA, Robin F, Bonnet R, Fabre L, Brisabois A, Cloeckaert A, Weill FX, Novel plasmid-encoded ceftazidime-hydrolyzing CTX-M-53 extended-spectrum beta-lactamase from Salmonella enterica serotypes Westhampton and Senftenberg, Antimicrob. Agents Chemother. 2009 May;53(5):1944-51.

Gayraud-Morel B, Chrétien F, Tajbakhsh S, Skeletal muscle as a paradigm for regenerative biology and medicine, Regen Med 2009 Mar;4(2):293-319.

Chamond N, Cosson A, Coatnoan N, Minoprio P, Proline racemases are conserved mitogens: characterization of a Trypanosoma vivax proline racemase, Mol. Biochem. Parasitol. 2009 Jun;165(2):170-9.

Lizárraga-Partida ML, Quilici ML, Molecular analyses of Vibrio cholerae O1 clinical strains, including new nontoxigenic variants isolated in Mexico during the Cholera epidemic years between 1991 and 2000, J. Clin. Microbiol. 2009 May;47(5):1364-71.

Petit AC, Nicolas JF, Large-scale clonal analysis reveals unexpected complexity in surface ectoderm morphogenesis, PLoS ONE 2009;4(2):e4353.

Dacheux L, Larrous F, Mailles A, Boisseleau D, Delmas O, Biron C, Bouchier C, Capek I, Muller M, Ilari F, Lefranc T, Raffi F, Goudal M, Bourhy H, European bat Lyssavirus transmission among cats, Europe, Emerging Infect. Dis. 2009 Feb;15(2):280-4.

Neven B, Leroy S, Decaluwe H, Le Deist F, Picard C, Moshous D, Mahlaoui N, Debré M, Casanova JL, Dal Cortivo L, Madec Y, Hacein-Bey-Abina S, de Saint Basile G, de Villartay JP, Blanche S, Cavazzana-Calvo M, Fischer A, Long-term outcome after hematopoietic stem cell transplantation of a single-center cohort of 90 patients with severe combined immunodeficiency, Blood 2009 Apr;113(17):4114-24.

Martinez-Jéhanne V, du Merle L, Bernier-Fébreau C, Usein C, Gassama-Sow A, Wane AA, Gouali M, Damian M, Aïdara-Kane A, Germani Y, Fontanet A, Coddeville B, Guérardel Y, Le Bouguénec C, Role of deoxyribose catabolism in colonization of the murine intestine by pathogenic Escherichia coli strains, Infect. Immun. 2009 Apr;77(4):1442-50.

Brisse S, Pannier C, Angoulvant A, de Meeus T, Diancourt L, Faure O, Muller H, Peman J, Viviani MA, Grillot R, Dujon B, Fairhead C, Hennequin C, Uneven distribution of mating types among genotypes of Candida glabrata isolates from clinical samples, Eukaryotic Cell 2009 Mar;8(3):287-95.

Tajbakhsh S, Rocheteau P, Le Roux I, Asymmetric cell divisions and asymmetric cell fates, Annu. Rev. Cell Dev. Biol. 2009;25:671-99.

Schofield PN, Brown SD, Sundberg JP, Arends M, Warren MV, Dubus P, Ellender M, Fiette L, Rozell B, Quintanilla-Martinez L, Raspa M, Song JY, van der Valk M, McKerlie C, PRIME importance of pathology expertise, Nat. Biotechnol. 2009 Jan;27(1):24-5.

Warren MV, Studley ML, Dubus P, Fiette L, Rozell B, Quintanilla-Martinez L, Raspa M, Breuer M, Song JY, Gates H, Brown SD, Schofield PN, An impending crisis in the provision of histopathology expertise for mouse functional genomics, J. Pathol. 2009 Jan;217(1):4-13.

Sivadon-Tardy V, Orlikowski D, Porcher R, Sharshar T, Durand MC, Enouf V, Rozenberg F, Caudie C, Annane D, van der Werf S, Lebon P, Raphaël JC, Gaillard JL, Gault E, Guillain-Barré syndrome and influenza virus infection, Clin. Infect. Dis. 2009 Jan;48(1):48-56.

Madec Y, Boufassa F, Avettand-Fenoel V, Hendou S, Melard A, Boucherit S, Surzyn J, Meyer L, Rouzioux C, , Early control of HIV-1 infection in long-term nonprogressors followed since diagnosis in the ANRS SEROCO/HEMOCO cohort, J. Acquir. Immune Defic. Syndr. 2009 Jan;50(1):19-26.

Hart IK, Sharshar T, Sathasivam S, Immunosuppressant drugs for myasthenia gravis, J. Neurol. Neurosurg. Psychiatr. 2009 Jan;80(1):5-6; discussion 6.

Chazaud B, Brigitte M, Yacoub-Youssef H, Arnold L, Gherardi R, Sonnet C, Lafuste P, Chretien F, Dual and beneficial roles of macrophages during skeletal muscle regeneration, Exerc Sport Sci Rev 2009 Jan;37(1):18-22.

Dominguez M, Jourdan-Da Silva N, Vaillant V, Pihier N, Kermin C, Weill FX, Delmas G, Kerouanton A, Brisabois A, de Valk H, Outbreak of Salmonella enterica serotype Montevideo infections in France linked to consumption of cheese made from raw milk, Foodborne Pathog. Dis. 2009 Jan-Feb;6(1):121-8.

Ngandjio A, Tejiokem M, Wouafo M, Ndome I, Yonga M, Guenole A, Lemee L, Quilici ML, Fonkoua MC, Antimicrobial resistance and molecular characterization of Vibrio cholerae O1 during the 2004 and 2005 outbreak of cholera in Cameroon, Foodborne Pathog. Dis. 2009 Jan-Feb;6(1):49-56.

Taha MK, Alonso JM, , [Anti-meningococcal vaccines]., Rev Prat 2008 Dec; 58(19): 2099-101.

Doublet B, Praud K, Weill FX, Cloeckaert A, Association of IS26-composite transposons and complex In4-type integrons generates novel multidrug resistance loci in Salmonella genomic island 1, J. Antimicrob. Chemother. 2009 Feb;63(2):282-9.

Giles-Vernick T, Entomology in translation: interpreting French medical entomological knowledge in colonial Mali, Parassitologia 2008 Dec;50(3-4):281-90.

Dacheux L, Reynes JM, Buchy P, Sivuth O, Diop BM, Rousset D, Rathat C, Jolly N, Dufourcq JB, Nareth C, Diop S, Iehlé C, Rajerison R, Sadorge C, Bourhy H, A reliable diagnosis of human rabies based on analysis of skin biopsy specimens, Clin. Infect. Dis. 2008 Dec;47(11):1410-7.

Gachelin G, Opinel A, Theories of genetics and evolution and the development of medical entomology in France (1900-1939), Parassitologia 2008 Dec;50(3-4):267-78.

Opinel A, Reconstructing an epistemological itinerary: environmental theories of variation in Roubaud’s experiments on Glossina flies and Anopheles, 1900-1938, Parassitologia 2008 Dec;50(3-4):255-65.

Coluzzi M, Gachelin G, Hardy A, Opinel A, Insects and illnesses: contributions to the history of medical entomology. Introduction, Parassitologia 2008 Dec;50(3-4):157-63.

Levy C, Taha MK, Weill Olivier C, Quinet B, Lécuyer A, Alonso JM, Cohen R, Bingen E, , [Characteristics of meningococcal meningitis in children in France], Arch Pediatr 2008 Dec;15 Suppl 3:S105-10.

Polyakov P, Wiegand S, Investigation of the Soret effect in aqueous and non-aqueous mixtures by the thermal lens technique, Phys Chem Chem Phys 2009 Feb;11(5):864-71.

Polyakov P, Müller-Plathe F, Wiegand S, Reverse nonequilibrium molecular dynamics calculation of the Soret coefficient in liquid heptane/benzene mixtures, J Phys Chem B 2008 Nov;112(47):14999-5004.

Jaureguy F, Landraud L, Passet V, Diancourt L, Frapy E, Guigon G, Carbonnelle E, Lortholary O, Clermont O, Denamur E, Picard B, Nassif X, Brisse S, Phylogenetic and genomic diversity of human bacteremic Escherichia coli strains, BMC Genomics 2008;9:560.

Hendriksen RS, Seyfarth AM, Jensen AB, Whichard J, Karlsmose S, Joyce K, Mikoleit M, Delong SM, Weill FX, Aidara-Kane A, Lo Fo Wong DM, Angulo FJ, Wegener HC, Aarestrup FM, Results of use of WHO Global Salm-Surv external quality assurance system for antimicrobial susceptibility testing of Salmonella isolates from 2000 to 2007, J. Clin. Microbiol. 2009 Jan;47(1):79-85.

Bourhy H, Reynes JM, Dunham EJ, Dacheux L, Larrous F, Huong VT, Xu G, Yan J, Miranda ME, Holmes EC, The origin and phylogeography of dog rabies virus, J. Gen. Virol. 2008 Nov;89(Pt 11):2673-81.

Tapio S, Schofield PN, Adelmann C, Atkinson MJ, Bard JL, Bijwaard H, Birschwilks M, Dubus P, Fiette L, Gerber G, Gruenberger M, Quintanilla-Martinez L, Rozell B, Saigusa S, Warren M, Watson CR, Grosche B, Progress in updating the European Radiobiology Archives, Int. J. Radiat. Biol. 2008 Nov;84(11):930-6.

Brock M, Jouvion G, Droin-Bergère S, Dussurget O, Nicola MA, Ibrahim-Granet O, , Bioluminescent Aspergillus fumigatus, a new tool for drug efficiency testing and in vivo monitoring of invasive aspergillosis., Appl Environ Microbiol 2008 Nov; 74(22): 7023-35.

Badell E, Nicolle F, Clark S, Majlessi L, Boudou F, Martino A, Castello-Branco L, Leclerc C, Lewis DJ, Marsh PD, Gicquel B, Winter N, Protection against tuberculosis induced by oral prime with Mycobacterium bovis BCG and intranasal subunit boost based on the vaccine candidate Ag85B-ESAT-6 does not correlate with circulating IFN-gamma producing T-cells, Vaccine 2009 Jan;27(1):28-37.

Saïdi H, Melki MT, Gougeon ML, HMGB1-dependent triggering of HIV-1 replication and persistence in dendritic cells as a consequence of NK-DC cross-talk, PLoS ONE 2008;3(10):e3601.

Grandesso F, Jourdan-da Silva N, Le Hello S, Roussel S, Rasson S, Rousseau C, Wyndels K, Robemanpianina I, Bourdeau I, Peyron C, Gehin R, Moyano M, Vogeleisen C, Excess of infections due to a multi-drug sensitive Salmonella enterica serotype Typhimurium in France in June 2008, Euro Surveill. 2008 Oct;13(44):pii: 19022.

Orlikowski D, Terzi N, Blumen M, Sharshar T, Raphael JC, Annane D, Lofaso F, Tongue weakness is associated with respiratory failure in patients with severe Guillain-Barré syndrome, Acta Neurol. Scand. 2009 Jun;119(6):364-70.

Charlier C, Nielsen K, Daou S, Brigitte M, Chretien F, Dromer F, Evidence of a role for monocytes in dissemination and brain invasion by Cryptococcus neoformans, Infect. Immun. 2009 Jan;77(1):120-7.

Mueller JE, Yaro S, Madec Y, Somda PK, Idohou RS, Lafourcade BM, Drabo A, Tarnagda Z, Sangaré L, Traoré Y, Fontanet A, Gessner BD, Association of respiratory tract infection symptoms and air humidity with meningococcal carriage in Burkina Faso, Trop. Med. Int. Health 2008 Dec;13(12):1543-52.

Rocheteau P, Tajbakhsh S, [Immortal DNA or epigenetic signature ?], Med Sci (Paris) 2008 Oct;24(10):847-52.

Jourdan N, Le Hello S, Delmas G, Clouzeau J, Manteau C, Desaubliaux B, Chagnon V, Thierry-Bled F, Demare N, Weill F, de Valk H, Nationwide outbreak of Salmonella enterica serotype gives infections in infants in France, linked to infant milk formula, September 2008, Euro Surveill. 2008 Sep;13(39).

Temime L, Boelle PY, Opatowski L, Guillemot D., Impact of capsular switch on invasive pneumococcal disease incidence in a vaccinated population, PLoS One. 2008 Sep 19;3(9):e3244.

Ragon M, Wirth T, Hollandt F, Lavenir R, Lecuit M, Le Monnier A, Brisse S, , A new perspective on Listeria monocytogenes evolution., PLoS Pathog 2008 Sep; 4(9): e1000146.

Berthet N, Reinhardt AK, Leclercq I, van Ooyen S, Batéjat C, Dickinson P, Stamboliyska R, Old IG, Kong KA, Dacheux L, Bourhy H, Kennedy GC, Korfhage C, Cole ST, Manuguerra JC, , Phi29 polymerase based random amplification of viral RNA as an alternative to random RT-PCR., BMC Mol Biol 2008 Sep; 9(): 77.

Grayo S, Lott-Desroches MC, Dussurget O, Respaud R, Fontanet A, Join-Lambert O, Singlas E, Le Monnier A, , Rapid eradication of Listeria monocytogenes by moxifloxacin in a murine model of central nervous system listeriosis., Antimicrob Agents Chemother 2008 Sep; 52(9): 3210-5.

Van Kerkhove MD, Ly S, Holl D, Guitian J, Mangtani P, Ghani AC, Vong S, Frequency and patterns of contact with domestic poultry and potential risk of H5N1 transmission to humans living in rural Cambodia, Influenza Other Respir Viruses 2008 Sep;2(5):155-63.

Potagas C, Mitsonis C, Watier L, Dellatolas G, Retziou A, Mitropoulos P, Sfagos C, Vassilopoulos D, Influence of anxiety and reported stressful life events on relapses in multiple sclerosis: a prospective study, Mult. Scler. 2008 Nov;14(9):1262-8.

Le Minor O, Germani Y, Chartier L, Lan NH, Lan NT, Duc NH, Laureillard D, Fontanet A, Sar B, Saman M, Chan S, L'Her P, Mayaud C, Vray M, Predictors of pneumocystosis or tuberculosis in HIV-infected Asian patients with AFB smear-negative sputum pneumonia, J. Acquir. Immune Defic. Syndr. 2008 Aug;48(5):620-7.

Glomski IJ, Dumetz F, Jouvion G, Huerre MR, Mock M, Goossens PL, Inhaled non-capsulated Bacillus anthracis in A/J mice: nasopharynx and alveolar space as dual portals of entry, delayed dissemination, and specific organ targeting, Microbes Infect. 2008 Oct;10(12-13):1398-404.

Doublet B, Praud K, Bertrand S, Collard JM, Weill FX, Cloeckaert A, Novel insertion sequence- and transposon-mediated genetic rearrangements in genomic island SGI1 of Salmonella enterica serovar Kentucky., Antimicrob Agents Chemother 2008 Oct; 52(10): 3745-54.

Boumghar-Bourtchai L, Mariani-Kurkdjian P, Bingen E, Filliol I, Dhalluin A, Ifrane SA, Weill FX, Leclercq R, Macrolide-resistant Shigella sonnei, Emerging Infect. Dis. 2008 Aug;14(8):1297-9.

Skoczynska A, Alonso JM, Taha MK, Ciprofloxacin resistance in Neisseria meningitidis, France, Emerging Infect. Dis. 2008 Aug;14(8):1322-3.

Holt KE, Parkhill J, Mazzoni CJ, Roumagnac P, Weill FX, Goodhead I, Rance R, Baker S, Maskell DJ, Wain J, Dolecek C, Achtman M, Dougan G, High-throughput sequencing provides insights into genome variation and evolution in Salmonella Typhi, Nat. Genet. 2008 Aug;40(8):987-93.

Vray M, Germani Y, Chan S, Duc NH, Sar B, Sarr FD, Bercion R, Rahalison L, Maynard M, L'Her P, Chartier L, Mayaud C, Clinical features and etiology of pneumonia in acid-fast bacillus sputum smear-negative HIV-infected patients hospitalized in Asia and Africa, AIDS 2008 Jul;22(11):1323-32.

El Karoui K, Lanternier F, Taieb F, Poirée S, Zahar JR, Mechaï F, Lortholary O, Peyromaure M, Escherichia coli extensive cellulitis after laparoscopic radical prostatectomy., Urology 2008 Oct; 72(4): 778-9.

Bristeau-Leprince A, Mateo V, Lim A, Magerus-Chatinet A, Solary E, Fischer A, Rieux-Laucat F, Gougeon ML, Human TCR alpha/beta+ CD4-CD8- double-negative T cells in patients with autoimmune lymphoproliferative syndrome express restricted Vbeta TCR diversity and are clonally related to CD8+ T cells, J. Immunol. 2008 Jul;181(1):440-8.

Tarantola A, Vaucel J, Laviolle C, Quilici ML, Thiolet JM, Fournier JM,, A cluster of Vibrio cholerae O1 infections in French travelers to Rajasthan (India), May 2006, J Travel Med 2008 Jul-Aug;15(4):273-7.

Opinel A, The emergence of French medical entomology: the influence of universities, the Institut Pasteur and military physicians (1890-c.1938), Med Hist 2008 Jul;52(3):387-405.

Gordon L, Cloeckaert A, Doublet B, Schwarz S, Bouju-Albert A, Ganière JP, Le Bris H, Le Flèche-Matéos A, Giraud E, Complete sequence of the floR-carrying multiresistance plasmid pAB5S9 from freshwater Aeromonas bestiarum., J Antimicrob Chemother 2008 Jul; 62(1): 65-71.

Sharshar T, [ICU-acquired neuromyopathy, delirium and sedation in intensive care unit], Ann Fr Anesth Reanim 2008 Jul-Aug;27(7-8):617-22.

Blanco P, Polyakov P, Bou-Ali MM, Wiegand S, Thermal diffusion and molecular diffusion values for some alkane mixtures: a comparison between thermogravitational column and thermal diffusion forced rayleigh scattering, J Phys Chem B 2008 Jul;112(28):8340-5.

Dumas A, Brigitte M, Moreau MF, Chrétien F, Baslé MF, Chappard D, Bone mass and microarchitecture of irradiated and bone marrow-transplanted mice: influences of the donor strain, Osteoporos Int 2009 Mar;20(3):435-43.

Abdoul H, Mallet V, Pol S, Fontanet A, Serum alpha-fetoprotein predicts treatment outcome in chronic hepatitis C patients regardless of HCV genotype, PLoS ONE 2008 Jun;3(6):e2391.

Frangeul L, Quillardet P, Castets AM, Humbert JF, Matthijs HC, Cortez D, Tolonen A, Zhang CC, Gribaldo S, Kehr JC, Zilliges Y, Ziemert N, Becker S, Talla E, Latifi A, Billault A, Lepelletier A, Dittmann E, Bouchier C, de Marsac NT, Highly plastic genome of Microcystis aeruginosa PCC 7806, a ubiquitous toxic freshwater cyanobacterium, BMC Genomics 2008;9:274.

Egorova S, Timinouni M, Demartin M, Granier SA, Whichard JM, Sangal V, Fabre L, Delauné A, Pardos M, Millemann Y, Espié E, Achtman M, Grimont PA, Weill FX, , Ceftriaxone-resistant salmonella enterica serotype Newport, France., Emerging Infect. Dis. 2008 Jun; 14(6): 954-7.

Sharshar T, Annane D, Endocrine effects of vasopressin in critically ill patients, Best Pract Res Clin Anaesthesiol 2008 Jun;22(2):265-73.

Gaillard R, [Cerebral images in bipolar disorder], Encephale 2008 Jun;34 Suppl 4:S146-9.

Collard JM, Bertrand S, Dierick K, Godard C, Wildemauwe C, Vermeersch K, Duculot J, Van Immerseel F, Pasmans F, Imberechts H, Quinet C, Drastic decrease of Salmonella Enteritidis isolated from humans in Belgium in 2005, shift in phage types and influence on foodborne outbreaks., Epidemiol Infect 2008 Jun; 136(6): 771-81.

Epelbaum S, Pinel P, Gaillard R, Delmaire C, Perrin M, Dupont S, Dehaene S, Cohen L, Pure alexia as a disconnection syndrome: new diffusion imaging evidence for an old concept, Cortex 2008 Sep;44(8):962-74.

Nemec A, Krízová L, Maixnerová M, Diancourt L, van der Reijden TJ, Brisse S, van den Broek P, Dijkshoorn L, Emergence of carbapenem resistance in Acinetobacter baumannii in the Czech Republic is associated with the spread of multidrug-resistant strains of European clone II, J. Antimicrob. Chemother. 2008 Sep;62(3):484-9.

Opatowski L, Temime L, Varon E, Leclercq R, Leclerc R, Drugeon H, Boëlle PY, Guillemot D, Antibiotic innovation may contribute to slowing the dissemination of multiresistant Streptococcus pneumoniae: the example of ketolides, PLoS ONE 2008;3(5):e2089.

De Jonghe B, Lacherade JC, Durand MC, Sharshar T, Critical illness neuromuscular syndromes, Neurol Clin 2008 May;26(2):507-20, ix.

Aboab J, Polito A, Orlikowski D, Sharshar T, Castel M, Annane D, Hydrocortisone effects on cardiovascular variability in septic shock: a spectral analysis approach, Crit. Care Med. 2008 May;36(5):1481-6.

Touati A, Benallaoua S, Gharout A, Amar AA, Le Magrex Debar E, Brasme L, Madoux J, De Champs C, Weill FX, First report of CTX-M-15 in Salmonella enterica serotype Kedougou recovered from an Algerian hospital, Pediatr. Infect. Dis. J. 2008 May;27(5):479-80.

Delmas O, Holmes EC, Talbi C, Larrous F, Dacheux L, Bouchier C, Bourhy H, Genomic diversity and evolution of the lyssaviruses, PLoS ONE 2008 Apr;3(4):e2057.

, Identification of a rabid dog illegally introduced from the Republic of the Gambia to Belgium and France, Euro Surveill. 2008 Apr;13(18).

Charlier C, Dromer F, Lévêque C, Chartier L, Cordoliani YS, Fontanet A, Launay O, Lortholary O, , Cryptococcal neuroradiological lesions correlate with severity during cryptococcal meningoencephalitis in HIV-positive patients in the HAART era, PLoS ONE 2008;3(4):e1950.

Cauchemez S, Valleron AJ, Boëlle PY, Flahault A, Ferguson NM, Estimating the impact of school closure on influenza transmission from Sentinel data, Nature 2008 Apr;452(7188):750-4.

Gallien S, Taieb F, Schlemmer F, Lagrange-Xelot M, Atlan A, Sarfati C, Molina JM, Failure of atovaquone/proguanil to prevent Plasmodium ovale malaria in traveler returning from Cameroon, Travel Med Infect Dis 2008 May;6(3):128-9.

Osorio Y Fortéa J, Prina E, Lang T, Milon G, Davory C, Coppée JY, Regnault B, AffyGCQC: a web-based interface to detect outlying genechips with extreme studentized deviate tests, J Bioinform Comput Biol 2008 Apr;6(2):317-34.

Mouala C, Madec Y, Adam G, Courpotin C, Fikouma V, Gentilini M, Ould Mohamedoune A, Nzounza P, Schaer E, Simon B, Mattei JF, [Ten years of commitment to persons living with HIV-AIDS: evaluation of the management in three ambulatory treatment centers of the French Red Cross in Africa], Sante 2008 Apr-Jun;18(2):89-95.

Faibis F, Mihaila L, Perna S, Lefort JF, Demachy MC, Le Flèche-Matéos A, Bouvet A, Streptococcus sinensis: an emerging agent of infective endocarditis., J Med Microbiol 2008 Apr; 57(Pt 4): 528-531.

Taha MK, Alonso JM, Corticosteroids for bacterial meningitis, N. Engl. J. Med. 2008 Mar;358(13):1400; author reply 1400-1.

Fèvre-Montange M, Szathmari A, Champier J, Mokhtari K, Chrétien F, Coulon A, Figarella-Branger D, Polivka M, Varlet P, Uro-Coste E, Fauchon F, Jouvet A, Pineocytoma and pineal parenchymal tumors of intermediate differentiation presenting cytologic pleomorphism: a multicenter study, Brain Pathol. 2008 Jul;18(3):354-9.

, Identification of a rabid dog in France illegally introduced from Morocco, Euro Surveill. 2008 Mar;13(11).

Gholami A, Kassis R, Real E, Delmas O, Guadagnini S, Larrous F, Obach D, Prevost MC, Jacob Y, Bourhy H, Mitochondrial dysfunction in lyssavirus-induced apoptosis, J. Virol. 2008 May;82(10):4774-84.

Baker S, Holt K, van de Vosse E, Roumagnac P, Whitehead S, King E, Ewels P, Keniry A, Weill FX, Lightfoot D, van Dissel JT, Sanderson KE, Farrar J, Achtman M, Deloukas P, Dougan G, High-throughput genotyping of Salmonella enterica serovar Typhi allowing geographical assignment of haplotypes and pathotypes within an urban District of Jakarta, Indonesia, J. Clin. Microbiol. 2008 May;46(5):1741-6.

Schäppi M, Deffert C, Fiette L, Gavazzi G, Herrmann F, Belli D, Krause KH, Branched fungal beta-glucan causes hyperinflammation and necrosis in phagocyte NADPH oxidase-deficient mice, J. Pathol. 2008 Mar;214(4):434-44.

Meakins S, Fisher IS, Berghold C, Gerner-Smidt P, Tschäpe H, Cormican M, Luzzi I, Schneider F, Wannett W, Coia J, Echeita A, Threlfall EJ, Antimicrobial drug resistance in human nontyphoidal Salmonella isolates in Europe 2000-2004: a report from the Enter-net International Surveillance Network., Microb Drug Resist 2008 Mar; 14(1): 31-5.

Zarantonelli ML, Lancellotti M, Deghmane AE, Giorgini D, Hong E, Ruckly C, Alonso JM, Taha MK, Hyperinvasive genotypes of Neisseria meningitidis in France, Clin. Microbiol. Infect. 2008 May;14(5):467-72.

Couderc T, Chrétien F, Schilte C, Disson O, Brigitte M, Guivel-Benhassine F, Touret Y, Barau G, Cayet N, Schuffenecker I, Desprès P, Arenzana-Seisdedos F, Michault A, Albert ML, Lecuit M, , A mouse model for Chikungunya: young age and inefficient type-I interferon signaling are risk factors for severe disease., PLoS Pathog 2008 Feb; 4(2): e29.

Moranne O, Watier L, Rossert J, Stengel B, , Primary glomerulonephritis: an update on renal survival and determinants of progression, QJM 2008 Mar;101(3):215-24.

Morel C, Badell E, Abadie V, Robledo M, Setterblad N, Gluckman JC, Gicquel B, Boudaly S, Winter N, Mycobacterium bovis BCG-infected neutrophils and dendritic cells cooperate to induce specific T cell responses in humans and mice, Eur. J. Immunol. 2008 Feb;38(2):437-47.

Vandenbogaert M, Li-Thiao-Té S, Kaltenbach HM, Zhang R, Aittokallio T, Schwikowski B, Alignment of LC-MS images, with applications to biomarker discovery and protein identification, Proteomics 2008 Feb;8(4):650-72.

Polyakov P, Wiegand S, Systematic study of the thermal diffusion in associated mixtures, J Chem Phys 2008 Jan;128(3):034505.

Ferreira E, Dias R, Giorgini D, Caniça M, Taha MK, Neisseria meningitidis serogroup W135 in Portugal: presence of the ST-11/ET-37 clonal complex, Pathol. Biol. 2008 Mar;56(2):94-6.

Berthet N, Dickinson P, Filliol I, Reinhardt AK, Batejat C, Vallaeys T, Kong KA, Davies C, Lee W, Zhang S, Turpaz Y, Heym B, Coralie G, Dacheux L, Burguière AM, Bourhy H, Old IG, Manuguerra JC, Cole ST, Kennedy GC, , Massively parallel pathogen identification using high-density microarrays., Microb Biotechnol 2008 Jan; 1(1): 79-86.

Siami S, Annane D, Sharshar T, The encephalopathy in sepsis, Crit Care Clin 2008 Jan;24(1):67-82, viii.

Iehlé C, Dacheux L, Ralandison S, Rakoto Andrianarivelo M, Rousset D, Bourhy H, Delivery and follow-up of a healthy newborn from a mother with clinical rabies, J. Clin. Virol. 2008 May;42(1):82-5.

Tayeb LA, Lefevre M, Passet V, Diancourt L, Brisse S, Grimont PA, Comparative phylogenies of Burkholderia, Ralstonia, Comamonas, Brevundimonas and related organisms derived from rpoB, gyrB and rrs gene sequences, Res. Microbiol. 2008 Apr;159(3):169-77.

Yu CY, Chou SJ, Yeh CM, Chao MR, Huang KC, Chang YF, Chiou CS, Weill FX, Chiu CH, Chu CH, Chu C, Prevalence and characterization of multidrug-resistant (type ACSSuT) Salmonella enterica serovar Typhimurium strains in isolates from four gosling farms and a hatchery farm, J. Clin. Microbiol. 2008 Feb;46(2):522-6.

Taha MK, Alonso JM, , Molecular epidemiology of infectious diseases: the example of meningococcal disease., Res Microbiol ; 159(1): 62-6.

Gaillard R, Del Cul A, [A scientific model of consciousness: implications for neuropsychiatic diseases], Psychol Neuropsychiatr Vieil 2007 Dec;5(4):261-7.

Brutus L, Watier L, Hanitrasoamampionona V, Razanatsoarilala H, Cot M, Confirmation of the protective effect of Ascaris lumbricoides on Plasmodium falciparum infection: results of a randomized trial in Madagascar, Am. J. Trop. Med. Hyg. 2007 Dec;77(6):1091-5.

Poirier E, Watier L, Espie E, Weill FX, De Valk H, Desenclos JC, Evaluation of the impact on human salmonellosis of control measures targeted to Salmonella Enteritidis and Typhimurium in poultry breeding using time-series analysis and intervention models in France, Epidemiol. Infect. 2008 Sep;136(9):1217-24.

Opinel A, Teaching microbiology at the Institut Pasteur: the application of a pedagogical principle (1889-1939), Res. Microbiol. 2008 Jan-Feb;159(1):36-9.

Colebunders R, Tshomba A, Van Kerkhove MD, Bausch DG, Campbell P, Libande M, Pirard P, Tshioko F, Mardel S, Mulangu S, Sleurs H, Rollin PE, Muyembe-Tamfum JJ, Jeffs B, Borchert M, , Marburg hemorrhagic fever in Durba and Watsa, Democratic Republic of the Congo: clinical documentation, features of illness, and treatment, J. Infect. Dis. 2007 Nov;196 Suppl 2:S148-53.

Van Dyck F, Braem CV, Chen Z, Declercq J, Deckers R, Kim BM, Ito S, Wu MK, Cohen DE, Dewerchin M, Derua R, Waelkens E, Fiette L, Roebroek A, Schuit F, Van de Ven WJ, Shivdasani RA, Loss of the PlagL2 transcription factor affects lacteal uptake of chylomicrons, Cell Metab. 2007 Nov;6(5):406-13.

Vrints M, Bertrand S, Collard JM, A bacterial population study of commercialized wastewater inoculants., J Appl Microbiol 2007 Nov; 103(5): 2006-15.

Hart IK, Sathasivam S, Sharshar T, Immunosuppressive agents for myasthenia gravis, Cochrane Database Syst Rev 2007;(4):CD005224.

Gaillard R, Cohen L, Adam C, Clemenceau S, Hasboun D, Baulac M, Willer JC, Dehaene S, Naccache L, Subliminal words durably affect neuronal activity, Neuroreport 2007 Oct;18(15):1527-31.

Zarantonelli ML, Szatanik M, Giorgini D, Hong E, Huerre M, Guillou F, Alonso JM, Taha MK, , Transgenic mice expressing human transferrin as a model for meningococcal infection., Infect Immun 2007 Dec; 75(12): 5609-14.

Fazilleau N, Bachelez H, Gougeon ML, Viguier M, Cutting edge: size and diversity of CD4+CD25high Foxp3+ regulatory T cell repertoire in humans: evidence for similarities and partial overlapping with CD4+CD25- T cells, J. Immunol. 2007 Sep;179(6):3412-6.

Goytia M, Chamond N, Cosson A, Coatnoan N, Hermant D, Berneman A, Minoprio P, Molecular and structural discrimination of proline racemase and hydroxyproline-2-epimerase from nosocomial and bacterial pathogens, PLoS ONE 2007;2(9):e885.

Vray M, Simon F, Bompart F, , Guidelines for clinical research in developing countries, Therapie 2007 May-Jun;62(3):217-27.

Briand V, Bouchaud O, Tourret J, Behr C, Abgrall S, Ralaimazava P, Le Bras J, Fontanet A, Hospitalization criteria in imported falciparum malaria, J Travel Med 2007 Sep-Oct;14(5):306-11.

De Jonghe B, Bastuji-Garin S, Durand MC, Malissin I, Rodrigues P, Cerf C, Outin H, Sharshar T, , Respiratory weakness is associated with limb weakness and delayed weaning in critical illness, Crit. Care Med. 2007 Sep;35(9):2007-15.

Grégory T, Gaillard R, Grenier A, , [Hopes for future practice of junior orthopedic surgeons in France: a sociological study], Rev Chir Orthop Reparatrice Appar Mot 2007 Sep;93(5):429-34.

Le TA, Fabre L, Roumagnac P, Grimont PA, Scavizzi MR, Weill FX, Clonal expansion and microevolution of quinolone-resistant Salmonella enterica serotype typhi in Vietnam from 1996 to 2004, J. Clin. Microbiol. 2007 Nov;45(11):3485-92.

Diancourt L, Passet V, Chervaux C, Garault P, Smokvina T, Brisse S, Multilocus sequence typing of Lactobacillus casei reveals a clonal population structure with low levels of homologous recombination, Appl. Environ. Microbiol. 2007 Oct;73(20):6601-11.

Micol R, Lortholary O, Sar B, Laureillard D, Ngeth C, Dousset JP, Chanroeun H, Ferradini L, Guerin PJ, Dromer F, Fontanet A, Prevalence, determinants of positivity, and clinical utility of cryptococcal antigenemia in Cambodian HIV-infected patients, J. Acquir. Immune Defic. Syndr. 2007 Aug;45(5):555-9.

García Fernández A, Cloeckaert A, Bertini A, Praud K, Doublet B, Weill FX, Carattoli A, Comparative analysis of IncHI2 plasmids carrying blaCTX-M-2 or blaCTX-M-9 from Escherichia coli and Salmonella enterica strains isolated from poultry and humans, Antimicrob. Agents Chemother. 2007 Nov;51(11):4177-80.

Roman H, Carayol M, Watier L, Le Ray C, Breart G, Goffinet F, Planned vaginal delivery of fetuses in breech presentation at term: prenatal determinants predictive of elevated risk of cesarean delivery during labor, Eur. J. Obstet. Gynecol. Reprod. Biol. 2008 May;138(1):14-22.

Erdreich LS, Van Kerkhove MD, Scrafford CG, Barraj L, McNeely M, Shum M, Sheppard AR, Kelsh M, Factors that influence the radiofrequency power output of GSM mobile phones, Radiat. Res. 2007 Aug;168(2):253-61.

Gaillard R, Hemras A, Habert MO, Baup N, Naccache L, Gallarda T, Cohen L, Olié JP, Cognitive facilitation and behavioral disinhibition with benzodiazepine: a case report, J Clin Psychiatry 2007 Aug;68(8):1305-6.

Martinez V, Carcelain G, Badell E, Jouan M, Mauger I, Sellier P, Truffot C, Bricaire F, Arend SM, Ottenhoff T, Autran B, Gicquel B, T-cell and serological responses to Erp, an exported Mycobacterium tuberculosis protein, in tuberculosis patients and healthy individuals, BMC Infect. Dis. 2007 Jul;7:83.

Polyakov P, Zhang M, Müller-Plathe F, Wiegand S, Thermal diffusion measurements and simulations of binary mixtures of spherical molecules, J Chem Phys 2007 Jul;127(1):014502.

Tarantola A, Ioos S, Rotureau B, Paquet C, Quilici ML, Fournier JM, Retrospective analysis of the cholera cases imported to France from 1973 to 2005, J Travel Med 2007 Jul-Aug;14(4):209-14.

Amengual B, Bourhy H, López-Roig M, Serra-Cobo J, Temporal dynamics of European bat Lyssavirus type 1 and survival of Myotis myotis bats in natural colonies, PLoS ONE 2007;2(6):e566.

Weill FX, Tran HH, Roumagnac P, Fabre L, Minh NB, Stavnes TL, Lassen J, Bjune G, Grimont PA, Guerin PJ, Clonal reconquest of antibiotic-susceptible Salmonella enterica serotype Typhi in Son La Province, Vietnam, Am. J. Trop. Med. Hyg. 2007 Jun;76(6):1174-81.

Gaillard R, [Emotional dimensions of schizophrenic disorders], Encephale 2007 Jun;33 Pt 3:S371-4.

Jambaqué I, Dellatolas G, Fohlen M, Bulteau C, Watier L, Dorfmuller G, Chiron C, Delalande O, Memory functions following surgery for temporal lobe epilepsy in children, Neuropsychologia 2007 Sep;45(12):2850-62.

Taha MK, Vázquez JA, Hong E, Bennett DE, Bertrand S, Bukovski S, Cafferkey MT, Carion F, Christensen JJ, Diggle M, Edwards G, Enríquez R, Fazio C, Frosch M, Heuberger S, Hoffmann S, Jolley KA, Kadlubowski M, Kechrid A, Kesanopoulos K, Kriz P, Lambertsen L, Levenet I, Musilek M, Paragi M, Saguer A, Skoczynska A, Stefanelli P, Thulin S, Tzanakaki G, Unemo M, Vogel U, Zarantonelli ML, , Target gene sequencing to characterize the penicillin G susceptibility of Neisseria meningitidis., Antimicrob Agents Chemother 2007 Aug; 51(8): 2784-92.

Fontanet A, [Cross-species transmission: last obstacle before pandemic], Transfus Clin Biol 2007 May;14(1):16-7.

Tarantola A, Quilici ML,, Vibrio cholerae O1 strains with decreased susceptibility to fluoroquinolones in travellers returning from India (Rajasthan) to France, April 2007, Euro Surveill. 2007 May;12(5):E070503.2.

Roumagnac P, Brisse S, Weill FX, [Evolutionary history of Salmonella Typhi illustrates a new pattern of epidemiologic dynamics], Med Sci (Paris) 2007 May;23(5):455-6.

Collard JM, Place S, Denis O, Rodriguez-Villalobos H, Vrints M, Weill FX, Baucheron S, Cloeckaert A, Struelens M, Bertrand S, Travel-acquired salmonellosis due to Salmonella Kentucky resistant to ciprofloxacin, ceftriaxone and co-trimoxazole and associated with treatment failure., J Antimicrob Chemother 2007 Jul; 60(1): 190-2.

Fazilleau N, Delarasse C, Motta I, Fillatreau S, Gougeon ML, Kourilsky P, Pham-Dinh D, Kanellopoulos JM, T cell repertoire diversity is required for relapses in myelin oligodendrocyte glycoprotein-induced experimental autoimmune encephalomyelitis, J. Immunol. 2007 Apr;178(8):4865-75.

Ebersoldt M, Sharshar T, Annane D, Sepsis-associated delirium, Intensive Care Med 2007 Jun;33(6):941-50.

Parent du Châtelet I, Taha MK, Sesboüé C, Rouaud P, Perrocheau A, Lévy-Bruhl D, [Increased incidence of invasive meningococcal disease in Seine-Maritime. The evolving epidemiology due to the B:14:P1.7,16 strain], Arch Pediatr 2007 Jun;14(6):537-40.

Elias J, Reinhardt M, Hautmann W, Harms I, Oppermann H, Schröter M, Hellenbrand W, Oster P, Kurzai O, Taha MK, Nossal R, Frosch M, Vogel M, [3rd Workshop on Epidemiology, Prevention and Treatment of Invasive Meningococcal Disease in Würzburg 2006], Gesundheitswesen 2007 Apr;69(4):256-62.

Taha MK, Alonso JM, , Meningococcal vaccines: to eradicate the disease, not the bacterium., Hum Vaccin ; 3(4): 149-52.

Fournier JM, Quilici ML, [Cholera], Presse Med 2007 Apr;36(4 Pt 2):727-39.

Cloeckaert A, Praud K, Doublet B, Bertini A, Carattoli A, Butaye P, Imberechts H, Bertrand S, Collard JM, Arlet G, Weill FX, Dissemination of an extended-spectrum-beta-lactamase blaTEM-52 gene-carrying IncI1 plasmid in various Salmonella enterica serovars isolated from poultry and humans in Belgium and France between 2001 and 2005., Antimicrob Agents Chemother 2007 May; 51(5): 1872-5.

Cattoir V, Weill FX, Poirel L, Fabre L, Soussy CJ, Nordmann P, Prevalence of qnr genes in Salmonella in France, J. Antimicrob. Chemother. 2007 Apr;59(4):751-4.

Brouard C, Espié E, Weill FX, Kérouanton A, Brisabois A, Forgue AM, Vaillant V, de Valk H, Two consecutive large outbreaks of Salmonella enterica serotype Agona infections in infants linked to the consumption of powdered infant formula, Pediatr. Infect. Dis. J. 2007 Feb;26(2):148-52.

Madec Y, Laureillard D, Pinoges L, Fernandez M, Prak N, Ngeth C, Moeung S, Song S, Balkan S, Ferradini L, Quillet C, Fontanet A, Response to highly active antiretroviral therapy among severely immuno-compromised HIV-infected patients in Cambodia, AIDS 2007 Jan;21(3):351-9.

Boisier P, Nicolas P, Djibo S, Taha MK, Jeanne I, Maïnassara HB, Tenebray B, Kairo KK, Giorgini D, Chanteau S, Meningococcal meningitis: unprecedented incidence of serogroup X-related cases in 2006 in Niger, Clin. Infect. Dis. 2007 Mar;44(5):657-63.

Guerin PJ, Grais RF, Rottingen JA, Valleron AJ, Using European travellers as an early alert to detect emerging pathogens in countries with limited laboratory resources., BMC Public Health 2007 Jan; 7(): 8.

Fontanet A, [Lessons from SARS], Presse Med 2007 Feb;36(2 Pt 2):299-302.

Medeiros R, Rameix-Welti MA, Lorin V, Ribaud P, Manuguerra JC, Socie G, Scieux C, Naffakh N, van der Werf S, , Failure of zanamivir therapy for pneumonia in a bone-marrow transplant recipient infected by a zanamivir-sensitive influenza A (H1N1) virus., Antivir Ther 2007 ; 12(4): 571-6.

Males S, Gad RR, Esmat G, Abobakr H, Anwar M, Rekacewicz C, El Hoseiny M, Zalata K, Abdel-Hamid M, Bedossa P, Pol S, Mohamed MK, Fontanet A, Serum alpha-foetoprotein level predicts treatment outcome in chronic hepatitis C, Antivir. Ther. (Lond.) 2007;12(5):797-803.

Colle JH, Moreau JL, Fontanet A, Lambotte O, Delfraissy JF, Thèze J, The correlation between levels of IL-7Ralpha expression and responsiveness to IL-7 is lost in CD4 lymphocytes from HIV-infected patients, AIDS 2007 Jan;21(1):101-3.

Taha MK, Fox A, , Quality assessed nonculture techniques for detection and typing of meningococci., FEMS Microbiol Rev 2007 Jan; 31(1): 37-42.

Ly S, Van Kerkhove MD, Holl D, Froehlich Y, Vong S, Interaction between humans and poultry, rural Cambodia, Emerging Infect. Dis. 2007 Jan;13(1):130-2.

Kérouanton A, Marault M, Lailler R, Weill FX, Feurer C, Espié E, Brisabois A, Pulsed-field gel electrophoresis subtyping database for foodborne Salmonella enterica serotype discrimination, Foodborne Pathog. Dis. 2007;4(3):293-303.

Egorova S, Kaftyreva L, Grimont PA, Weill FX, Prevalence and characterization of extended-spectrum cephalosporin-resistant nontyphoidal Salmonella isolates in adults in Saint Petersburg, Russia (2002-2005), Microb. Drug Resist. 2007;13(2):102-7.

Opinel A, The Pasteur Hospital as an element of Emile Roux’s anti-diphtheria apparatus (1890-1914), Dynamis 2007;27:83-106.

Brédart S, Wastelin M, Collard JM, Coppée M, Bodart E, [Pet turtle and septicemia: what is the relationship?]., Rev Med Liege 2007 ; 62(7-8): 496-7.

Polyakov P, Luettmer-Strathmann J, Wiegand S, Study of the thermal diffusion behavior of alkane/benzene mixtures by thermal diffusion forced rayleigh scattering experiments and lattice model calculations, J Phys Chem B 2006 Dec;110(51):26215-24.

Feyssaguet M, Dacheux L, Audry L, Compoint A, Morize JL, Blanchard I, Bourhy H, Multicenter comparative study of a new ELISA, PLATELIA RABIES II, for the detection and titration of anti-rabies glycoprotein antibodies and comparison with the rapid fluorescent focus inhibition test (RFFIT) on human samples from vaccinated and non-vaccinated people, Vaccine 2007 Mar;25(12):2244-51.

Dellatolas G, Watier L, Giannopulu I, Chevrie-Muller C, [Behavior difficulties, attention difficulties and learning problems in children aged from 3.5 to 8 years: a longitudinal school study], Arch Pediatr 2007 Mar;14(3):227-33.

Roumagnac P, Weill FX, Dolecek C, Baker S, Brisse S, Chinh NT, Le TA, Acosta CJ, Farrar J, Dougan G, Achtman M, Evolutionary history of Salmonella typhi, Science 2006 Nov;314(5803):1301-4.

Gaillard R, Ouanas A, Spadone C, Llorca PM, Lôo H, Baylé FJ, [Benzodiazepines and schizophrenia, a review of the literature], Encephale 2006 Nov-Dec;32(6 Pt 1):1003-10.

Fox AJ, Taha MK, Vogel U, Standardized nonculture techniques recommended for European reference laboratories, FEMS Microbiol. Rev. 2007 Jan;31(1):84-8.

Zarantonelli ML, Huerre M, Taha MK, Alonso JM, , Differential role of lipooligosaccharide of Neisseria meningitidis in virulence and inflammatory response during respiratory infection in mice., Infect Immun 2006 Oct; 74(10): 5506-12.

Weill FX, Bertrand S, Guesnier F, Baucheron S, Cloeckaert A, Grimont PA, Ciprofloxacin-resistant Salmonella Kentucky in travelers, Emerging Infect. Dis. 2006 Oct;12(10):1611-2.

Briand V, Buffet P, Genty S, Lacombe K, Godineau N, Salomon J, Vandemelbrouck E, Ralaimazava P, Goujon C, Matheron S, Fontanet A, Bouchaud O, Absence of efficacy of nonviable Lactobacillus acidophilus for the prevention of traveler’s diarrhea: a randomized, double-blind, controlled study, Clin. Infect. Dis. 2006 Nov;43(9):1170-5.

Cloeckaert A, Praud K, Doublet B, Demartin M, Weill FX, Variant Salmonella genomic island 1-L antibiotic resistance gene cluster in Salmonella enterica serovar Newport, Antimicrob. Agents Chemother. 2006 Nov;50(11):3944-6.

Watier L, Dellatolas G, Chevrie-Muller C, [Language and behavioral difficulties at age 3 and half and reading delay in grade 2], Rev Epidemiol Sante Publique 2006 Sep;54(4):327-39.

Traoré Y, Njanpop-Lafourcade BM, Adjogble KL, Lourd M, Yaro S, Nacro B, Drabo A, Parent du Châtelet I, Mueller JE, Taha MK, Borrow R, Nicolas P, Alonso JM, Gessner BD, The rise and fall of epidemic Neisseria meningitidis serogroup W135 meningitis in Burkina Faso, 2002-2005, Clin. Infect. Dis. 2006 Oct;43(7):817-22.

Gaillard R, Del Cul A, Naccache L, Dehaene S, [Behavioural evidence of nonconscious semantic processing for emotional words], Med Sci (Paris) 2006 Aug-Sep;22(8-9):702-4.

Bertrand S, Weill FX, Cloeckaert A, Vrints M, Mairiaux E, Praud K, Dierick K, Wildemauve C, Godard C, Butaye P, Imberechts H, Grimont PA, Collard JM, Clonal emergence of extended-spectrum beta-lactamase (CTX-M-2)-producing Salmonella enterica serovar Virchow isolates with reduced susceptibilities to ciprofloxacin among poultry and humans in Belgium and France (2000 to 2003)., J Clin Microbiol 2006 Aug; 44(8): 2897-903.

Brutus L, Watier L, Briand V, Hanitrasoamampionona V, Razanatsoarilala H, Cot M, Parasitic co-infections: does Ascaris lumbricoides protect against Plasmodium falciparum infection?, Am. J. Trop. Med. Hyg. 2006 Aug;75(2):194-8.

Bauwens L, Vercammen F, Bertrand S, Collard JM, De Ceuster S, Isolation of Salmonella from environmental samples collected in the reptile department of Antwerp Zoo using different selective methods., J Appl Microbiol 2006 Aug; 101(2): 284-9.

Abolhassani M, Lagranderie M, Caminshi I, Romain F, Balazuc AM, Wagner MC, Tanguy M, Fiette L, Sobhani I, Milon G, Marchal G, Similar functional activity of dendritic cells recruited to the mesenteric lymph nodes of newborn and adult mice after the rectal delivery of Mycobacterium bovis BCG, Microbes Infect. 2006 Aug;8(9-10):2341-51.

Colle JH, Moreau JL, Fontanet A, Lambotte O, Joussemet M, Jacod S, Delfraissy JF, Thèze J, Regulatory dysfunction of the interleukin-7 receptor in CD4 and CD8 lymphocytes from HIV-infected patients–effects of antiretroviral therapy, J. Acquir. Immune Defic. Syndr. 2006 Jul;42(3):277-85.

Chiu CH, Su LH, Chu CH, Wang MH, Yeh CM, Weill FX, Chu C, Detection of multidrug-resistant Salmonella enterica serovar typhimurium phage types DT102, DT104, and U302 by multiplex PCR, J. Clin. Microbiol. 2006 Jul;44(7):2354-8.

Rouaud P, Perrocheau A, Taha MK, Sesboué C, Forgues AM, Parent du Châtelet I, Levy-Bruhl D, Prolonged outbreak of B meningococcal disease in the Seine-Maritime department, France, January 2003 to June 2005, Euro Surveill. 2006 Jul;11(7):178-81.

Rouaud P, Perrocheau A, Taha MK, Sesboué C, Forgues AM, Parent du Châtelet I, Lévy-Bruhl D, Prolonged outbreak of B meningococcal disease in the Seine-Maritime department, France, January 2003 to June 2005, Euro Surveill. 2006 Jul;11(7):3-4.

Migot-Nabias F, Pelleau S, Watier L, Guitard J, Toly C, De Araujo C, Ngom MI, Chevillard C, Gaye O, Garcia A, , Red blood cell polymorphisms in relation to Plasmodium falciparum asymptomatic parasite densities and morbidity in Senegal., Microbes Infect 2006 Aug; 8(9-10): 2352-8.

, Ajzenman C, Bizet MC, Dufraisse MP, Falip E, Fournier JM, Etchegorry MG, Haeghebaert S, Isnard H, Le Loc'h H, Mansir T, Quilici ML, Raqbi F, Raud E, Roberto Y, Scanvic A, Senellier M, Sirot S, Tarantola A, [Cases of imported cholera in France, summer 2005. A. Tarantola for the incident management teams], Med Mal Infect 2006 Jun;36(6):346-8.

Bégaud E, Chartier L, Marechal V, Ipero J, Léal J, Versmisse P, Breton G, Fontanet A, Capoulade-Metay C, Fleury H, Barré-Sinoussi F, Scott-Algara D, Pancino G, Reduced CD4 T cell activation and in vitro susceptibility to HIV-1 infection in exposed uninfected Central Africans, Retrovirology 2006;3:35.

Schuffenecker I, Iteman I, Michault A, Murri S, Frangeul L, Vaney MC, Lavenir R, Pardigon N, Reynes JM, Pettinelli F, Biscornet L, Diancourt L, Michel S, Duquerroy S, Guigon G, Frenkiel MP, Bréhin AC, Cubito N, Desprès P, Kunst F, Rey FA, Zeller H, Brisse S, Genome microevolution of chikungunya viruses causing the Indian Ocean outbreak, PLoS Med. 2006 Jul;3(7):e263.

Bercion R, Demartin M, Recio C, Massamba PM, Frank T, Escribà JM, Grimont F, Grimont PA, Weill FX, Molecular epidemiology of multidrug-resistant Shigella dysenteriae type 1 causing dysentery outbreaks in Central African Republic, 2003-2004, Trans. R. Soc. Trop. Med. Hyg. 2006 Dec;100(12):1151-8.

Sall AA, Ségéral O, Reynes JM, Lay S, Ouk V, Hak CR, Keo CL, Lefait RR, Delfraissy JF, Fontanet A, Immunosuppression and GB virus C-RNA detection among HIV-infected patients in Cambodia, AIDS 2006 May;20(8):1199-201.

Gouble A, Smith J, Bruneau S, Perez C, Guyot V, Cabaniols JP, Leduc S, Fiette L, Avé P, Micheau B, Duchateau P, Pâques F, Efficient in toto targeted recombination in mouse liver by meganuclease-induced double-strand break, J Gene Med 2006 May;8(5):616-22.

Taha MK, Zarantonelli ML, Ruckly C, Giorgini D, Alonso JM, Rifampin-resistant Neisseria meningitidis, Emerging Infect. Dis. 2006 May;12(5):859-60.

Gaillard R, Del Cul A, Naccache L, Vinckier F, Cohen L, Dehaene S, Nonconscious semantic processing of emotional words modulates conscious access, Proc. Natl. Acad. Sci. U.S.A. 2006 May;103(19):7524-9.

Gaillard R, Naccache L, Pinel P, Clémenceau S, Volle E, Hasboun D, Dupont S, Baulac M, Dehaene S, Adam C, Cohen L, Direct intracranial, FMRI, and lesion evidence for the causal role of left inferotemporal cortex in reading, Neuron 2006 Apr;50(2):191-204.

Régnier M, Vandenbogaert M, Comparison of statistical significance criteria, J Bioinform Comput Biol 2006 Apr;4(2):537-51.

Zarantonelli ML, Antignac A, Lancellotti M, Guiyoule A, Alonso JM, Taha MK, , Immunogenicity of meningococcal PBP2 during natural infection and protective activity of anti-PBP2 antibodies against meningococcal bacteraemia in mice., J Antimicrob Chemother 2006 May; 57(5): 924-30.

Weill FX, Guesnier F, Guibert V, Timinouni M, Demartin M, Polomack L, Grimont PA, Multidrug resistance in Salmonella enterica serotype Typhimurium from humans in France (1993 to 2003), J. Clin. Microbiol. 2006 Mar;44(3):700-8.

Tran HK, Chartier L, Troung LX, Nguyen NN, Fontanet A, Barré-Sinoussi FE, Pancino G, Scott-Algara D, Systemic immune activation in HIV-1-exposed uninfected Vietnamese intravascular drug users, AIDS Res. Hum. Retroviruses 2006 Mar;22(3):255-61.

Taha MK, Zarantonelli ML, Neri A, Enriquez R, Vázquez JA, Stefanelli P, , Interlaboratory comparison of PCR-based methods for detection of penicillin G susceptibility in Neisseria meningitidis., Antimicrob Agents Chemother 2006 Mar; 50(3): 887-92.

Vray M, Debonne JM, Sire JM, Tran N, Chevalier B, Plantier JC, Fall F, Vernet G, Simon F, Mb PS, Molecular epidemiology of hepatitis B virus in Dakar, Sénégal, J. Med. Virol. 2006 Mar;78(3):329-34.

Van Kerkhove MD, Parsonnet J, Weingart M, Tompkins LS, Investigation of mediastinitis due to coagulase-negative staphylococci after cardiothoracic surgery, Infect Control Hosp Epidemiol 2006 Mar;27(3):305-7.

Buschiazzo A, Goytia M, Schaeffer F, Degrave W, Shepard W, Grégoire C, Chamond N, Cosson A, Berneman A, Coatnoan N, Alzari PM, Minoprio P, Crystal structure, catalytic mechanism, and mitogenic properties of Trypanosoma cruzi proline racemase, Proc. Natl. Acad. Sci. U.S.A. 2006 Feb;103(6):1705-10.

Taha MK, Zarantonelli ML, Alonso JM, Naess LM, Holst J, Feiring B, Rosenqvist E, Use of available outer membrane vesicle vaccines to control serogroup B meningococcal outbreaks, Vaccine 2007 Mar;25(14):2537-8.

Gavazzi G, Banfi B, Deffert C, Fiette L, Schappi M, Herrmann F, Krause KH, Decreased blood pressure in NOX1-deficient mice, FEBS Lett. 2006 Jan;580(2):497-504.

Fevre C, Passet V, Weill FX, Grimont PA, Brisse S, Variants of the Klebsiella pneumoniae OKP chromosomal beta-lactamase are divided into two main groups, OKP-A and OKP-B, Antimicrob. Agents Chemother. 2005 Dec;49(12):5149-52.

Tsuji JS, Van Kerkhove MD, Kaetzel RS, Scrafford CG, Mink PJ, Barraj LM, Crecelius EA, Goodman M, Evaluation of exposure to arsenic in residential soil, Environ. Health Perspect. 2005 Dec;113(12):1735-40.

Opinel A, Gachelin G, Emile Brumpt’s contribution to the characterization of parasitic diseases in Brazil, 1909-1914, Parassitologia 2005 Dec;47(3-4):299-307.

Chevrie-Muller C, Watier L, Arabia J, Arabia C, Dellatolas G, [Screening by teachers for language and behavior difficulties in 2059 children aged 3,5 years], Rev Epidemiol Sante Publique 2005 Dec;53(6):645-57.

Perrocheau A, Taha MK, Levy-Bruhl D, Epidemiology of invasive meningococcal disease in France in 2003, Euro Surveill. 2005 Dec;10(12):238-41.

Perrocheau A, Taha MK, Lévy-Bruhl D, Epidemiology of invasive meningococcal disease in France in 2003, Euro Surveill. 2005 Dec;10(12):9-10.

Bertrand S, Huys G, Yde M, D'Haene K, Tardy F, Vrints M, Swings J, Collard JM, Detection and characterization of tet(M) in tetracycline-resistant Listeria strains from human and food-processing origins in Belgium and France., J Med Microbiol 2005 Dec; 54(Pt 12): 1151-1156.

Madec Y, Boufassa F, Porter K, Meyer L, , Spontaneous control of viral load and CD4 cell count progression among HIV-1 seroconverters, AIDS 2005 Nov;19(17):2001-7.

De Champs C, Vellin JF, Diancourt L, Brisse S, Kemeny JL, Gilain L, Mom T, Laryngeal scleroma associated with Klebsiella pneumoniae subsp. ozaenae, J. Clin. Microbiol. 2005 Nov;43(11):5811-3.

Bourhy H, Dacheux L, Strady C, Mailles A, Rabies in Europe in 2005, Euro Surveill. 2005 Nov;10(11):213-6.

Ghafir Y, China B, Korsak N, Dierick K, Collard JM, Godard C, De Zutter L, Daube G, Belgian surveillance plans to assess changes in Salmonella prevalence in meat at different production stages., J Food Prot 2005 Nov; 68(11): 2269-77.

Pasmans F, Martel A, Boyen F, Vandekerchove D, Wybo I, Immerseel FV, Heyndrickx M, Collard JM, Ducatelle R, Haesebrouck F, Characterization of Salmonella isolates from captive lizards., Vet Microbiol 2005 Oct; 110(3-4): 285-91.

Chamond N, Goytia M, Coatnoan N, Barale JC, Cosson A, Degrave WM, Minoprio P, Trypanosoma cruzi proline racemases are involved in parasite differentiation and infectivity, Mol. Microbiol. 2005 Oct;58(1):46-60.

Gaillard R, Naccache L, [Amygdala recording of emotions evoked by subliminal words], Med Sci (Paris) 2005 Oct;21(10):804-5.

Touqui L, Paya M, Thouron F, Guiyoule A, Zarantonelli ML, Leduc D, Wu Y, Taha MK, Alonso JM, , Neisseria meningitidis pili induce type-IIA phospholipase A2 expression in alveolar macrophages., FEBS Lett 2005 Sep; 579(22): 4923-7.

Gresh L, Bourachot B, Reimann A, Guigas B, Fiette L, Garbay S, Muchardt C, Hue L, Pontoglio M, Yaniv M, Klochendler-Yeivin A, The SWI/SNF chromatin-remodeling complex subunit SNF5 is essential for hepatocyte differentiation, EMBO J. 2005 Sep;24(18):3313-24.

Lambotte O, Boufassa F, Madec Y, Nguyen A, Goujard C, Meyer L, Rouzioux C, Venet A, Delfraissy JF, , HIV controllers: a homogeneous group of HIV-1-infected patients with spontaneous control of viral replication, Clin. Infect. Dis. 2005 Oct;41(7):1053-6.

Guillemot D, Varon E, Bernède C, Weber P, Henriet L, Simon S, Laurent C, Lecoeur H, Carbon C, Reduction of antibiotic use in the community reduces the rate of colonization with penicillin G-nonsusceptible Streptococcus pneumoniae, Clin. Infect. Dis. 2005 Oct;41(7):930-8.

Lancellotti M, Guiyoule A, Ruckly C, Hong E, Alonso JM, Taha MK, , Conserved virulence of C to B capsule switched Neisseria meningitidis clinical isolates belonging to ET-37/ST-11 clonal complex., Microbes Infect 2006 Jan; 8(1): 191-6.

Diancourt L, Passet V, Verhoef J, Grimont PA, Brisse S, Multilocus sequence typing of Klebsiella pneumoniae nosocomial isolates, J. Clin. Microbiol. 2005 Aug;43(8):4178-82.

Fevre C, Jbel M, Passet V, Weill FX, Grimont PA, Brisse S, Six groups of the OXY beta-Lactamase evolved over millions of years in Klebsiella oxytoca, Antimicrob. Agents Chemother. 2005 Aug;49(8):3453-62.

Davis PL, Holmes EC, Larrous F, Van der Poel WH, Tjørnehøj K, Alonso WJ, Bourhy H, Phylogeography, population dynamics, and molecular evolution of European bat lyssaviruses, J. Virol. 2005 Aug;79(16):10487-97.

Mégret F, Prehaud C, Lafage M, Batejat C, Escriou N, Lay S, Thoulouze MI, Lafon M, Immunopotentiation of the antibody response against influenza HA with apoptotic bodies generated by rabies virus G-ERA protein-driven apoptosis, Vaccine 2005 Nov;23(46-47):5342-50.

Lortholary O, Fontanet A, Mémain N, Martin A, Sitbon K, Dromer F,, Incidence and risk factors of immune reconstitution inflammatory syndrome complicating HIV-associated cryptococcosis in France, AIDS 2005 Jul;19(10):1043-9.

Weill FX, Fabre L, Grandry B, Grimont PA, Casin I, Multiple-antibiotic resistance in Salmonella enterica serotype Paratyphi B isolates collected in France between 2000 and 2003 is due mainly to strains harboring Salmonella genomic islands 1, 1-B, and 1-C, Antimicrob. Agents Chemother. 2005 Jul;49(7):2793-801.

Guillemot D, France G, Fender P, , Methodology for the evaluation and measurement of therapeutic progress, Therapie 2005 Jul-Aug;60(4):359-62, 363-6.

Vray M, Hamelin B, Jaillon P, , The respective roles of controlled clinical trials and cohort monitoring studies in the pre- and postmarketing assessment of drugs, Therapie 2005 Jul-Aug;60(4):339-44, 345-9.

Quilici ML, Robert-Pillot A, Picart J, Fournier JM, Pandemic Vibrio parahaemolyticus O3:K6 spread, France, Emerging Infect. Dis. 2005 Jul;11(7):1148-9.

Declercq J, Van Dyck F, Braem CV, Van Valckenborgh IC, Voz M, Wassef M, Schoonjans L, Van Damme B, Fiette L, Van de Ven WJ, Salivary gland tumors in transgenic mice with targeted PLAG1 proto-oncogene overexpression, Cancer Res. 2005 Jun;65(11):4544-53.

Lebrun L, Weill FX, Lafendi L, Houriez F, Casanova F, Gutierrez MC, Ingrand D, Lagrange P, Vincent V, Herrmann JL, Use of the INNO-LiPA-MYCOBACTERIA assay (version 2) for identification of Mycobacterium avium-Mycobacterium intracellulare-Mycobacterium scrofulaceum complex isolates, J. Clin. Microbiol. 2005 Jun;43(6):2567-74.

Briand V, Watier L, LE Hesran JY, Garcia A, Cot M, Coinfection with Plasmodium falciparum and schistosoma haematobium: protective effect of schistosomiasis on malaria in senegalese children?, Am. J. Trop. Med. Hyg. 2005 Jun;72(6):702-7.

Taha MK, Alonso JM, [Pathophysiology and molecular pathogenesis of meningococcal invasive infections], Arch Pediatr 2005 Jun;12(6):753-4.

Helms M, Ethelberg S, Mølbak K, International Salmonella Typhimurium DT104 infections, 1992-2001., Emerg Infect Dis 2005 Jun; 11(6): 859-67.

Naccache L, Gaillard R, Adam C, Hasboun D, Clémenceau S, Baulac M, Dehaene S, Cohen L, A direct intracranial record of emotions evoked by subliminal words, Proc. Natl. Acad. Sci. U.S.A. 2005 May;102(21):7713-7.

Abadie V, Badell E, Douillard P, Ensergueix D, Leenen PJ, Tanguy M, Fiette L, Saeland S, Gicquel B, Winter N, Neutrophils rapidly migrate via lymphatics after Mycobacterium bovis BCG intradermal vaccination and shuttle live bacilli to the draining lymph nodes, Blood 2005 Sep;106(5):1843-50.

Alonso JM, Taha MK, , [Meningococcal vaccines: present status and perspectives]., Therapie. 2005 ; 60(3): 283-6.

Petit AC, Legué E, Nicolas JF, Methods in clonal analysis and applications, Reprod. Nutr. Dev. 2005 May-Jun;45(3):321-39.

Madec Y, Boufassa F, Rouzioux C, Delfraissy JF, Meyer L, , Undetectable viremia without antiretroviral therapy in patients with HIV seroconversion: an uncommon phenomenon?, Clin. Infect. Dis. 2005 May;40(9):1350-4.

Holst J, Feiring B, Naess LM, Norheim G, Kristiansen P, Høiby EA, Bryn K, Oster P, Costantino P, Taha MK, Alonso JM, Caugant DA, Wedege E, Aaberge IS, Rappuoli R, Rosenqvist E, The concept of “tailor-made”, protein-based, outer membrane vesicle vaccines against meningococcal disease, Vaccine 2005 Mar;23(17-18):2202-5.

Njanpop-Lafourcade BM, Parent du Châtelet I, Sanou O, Alonso JM, Taha MK, The establishment of Neisseria meningitidis serogroup W135 of the clonal complex ET-37/ST-11 as an epidemic clone and the persistence of serogroup A isolates in Burkina Faso, Microbes Infect. 2005 Apr;7(4):645-9.

Espié E, Weill FX, Brouard C, Capek I, Delmas G, Forgues AM, Grimont F, de Valk H, Nationwide outbreak of Salmonella enterica serotype Agona infections in infants in France, linked to infant milk formula, investigations ongoing, Euro Surveill. 2005;10(3):E050310.1.

Bouallègue-Godet O, Ben Salem Y, Fabre L, Demartin M, Grimont PA, Mzoughi R, Weill FX, Nosocomial outbreak caused by Salmonella enterica serotype Livingstone producing CTX-M-27 extended-spectrum beta-lactamase in a neonatal unit in Sousse, Tunisia, J. Clin. Microbiol. 2005 Mar;43(3):1037-44.

González-Zorn B, Senna JP, Fiette L, Shorte S, Testard A, Chignard M, Courvalin P, Grillot-Courvalin C, Bacterial and host factors implicated in nasal carriage of methicillin-resistant Staphylococcus aureus in mice, Infect. Immun. 2005 Mar;73(3):1847-51.

Rousseau-Merck MF, Fiette L, Klochendler-Yeivin A, Delattre O, Aurias A, Chromosome mechanisms and INI1 inactivation in human and mouse rhabdoid tumors, Cancer Genet. Cytogenet. 2005 Mar;157(2):127-33.

Faye A, Mariani-Kurkjian P, Taha MK, Louzeau C, Bingen E, Bourrillon A, [Clinical aspects and outcome of meningococcal disease due to Neisseria meningitidis of serogroup W135 in 5 children], Arch Pediatr 2005 Mar;12(3):291-4.

Charlier C, Chrétien F, Baudrimont M, Mordelet E, Lortholary O, Dromer F, Capsule structure changes associated with Cryptococcus neoformans crossing of the blood-brain barrier, Am. J. Pathol. 2005 Feb;166(2):421-32.

Fontanet AL, Houzé S, Keundjian A, Schiemann R, Ralaimazava P, Durand R, Cha O, Coulaud JP, Le Bras J, Bouchaud O, Efficacy of antimalarial chemoprophylaxis among French residents travelling to Africa, Trans. R. Soc. Trop. Med. Hyg. 2005 Feb;99(2):91-100.

Fisher IS, Threlfall EJ, The Enter-net and Salm-gene databases of foodborne bacterial pathogens that cause human infections in Europe and beyond: an international collaboration in surveillance and the development of intervention strategies., Epidemiol Infect 2005 Feb; 133(1): 1-7.

Taha MK, Alonso JM, Cafferkey M, Caugant DA, Clarke SC, Diggle MA, Fox A, Frosch M, Gray SJ, Guiver M, Heuberger S, Kalmusova J, Kesanopoulos K, Klem AM, Kriz P, Marsh J, Mölling P, Murphy K, Olcén P, Sanou O, Tzanakaki G, Vogel U, , Interlaboratory comparison of PCR-based identification and genogrouping of Neisseria meningitidis., J Clin Microbiol 2005 Jan; 43(1): 144-9.

Vray M, Joubert JM, Eschwège E, Liard F, Fagnani F, Montestruc F, Fages S, Bégaud B, [Results from the observational study EPIGRAM: management of excess weight in general practice and follow-up of patients treated with orlistat], Therapie 2005 Jan-Feb;60(1):17-24.

Tompa M, Li N, Bailey TL, Church GM, De Moor B, Eskin E, Favorov AV, Frith MC, Fu Y, Kent WJ, Makeev VJ, Mironov AA, Noble WS, Pavesi G, Pesole G, Régnier M, Simonis N, Sinha S, Thijs G, van Helden J, Vandenbogaert M, Weng Z, Workman C, Ye C, Zhu Z, Assessing computational tools for the discovery of transcription factor binding sites, Nat. Biotechnol. 2005 Jan;23(1):137-44.

Henry C, Gaillard R, Volle E, Chiras J, Ferrieux S, Dehaene S, Cohen L, Brain activations during letter-by-letter reading: a follow-up study, Neuropsychologia 2005;43(14):1983-9.

Maroto M, Dale JK, Dequéant ML, Petit AC, Pourquié O, Synchronised cycling gene oscillations in presomitic mesoderm cells require cell-cell contact, Int. J. Dev. Biol. 2005;49(2-3):309-15.

Naccache L, Puybasset L, Gaillard R, Serve E, Willer JC, Auditory mismatch negativity is a good predictor of awakening in comatose patients: a fast and reliable procedure, Clin Neurophysiol 2005 Apr;116(4):988-9.

Parent du Châtelet I, Traore Y, Gessner BD, Antignac A, Naccro B, Njanpop-Lafourcade BM, Ouedraogo MS, Tiendrebeogo SR, Varon E, Taha MK, Bacterial meningitis in Burkina Faso: surveillance using field-based polymerase chain reaction testing, Clin. Infect. Dis. 2005 Jan;40(1):17-25.

Weill FX, Lailler R, Praud K, Kérouanton A, Fabre L, Brisabois A, Grimont PA, Cloeckaert A, Emergence of extended-spectrum-beta-lactamase (CTX-M-9)-producing multiresistant strains of Salmonella enterica serotype Virchow in poultry and humans in France, J. Clin. Microbiol. 2004 Dec;42(12):5767-73.

Reynes JM, Molia S, Audry L, Hout S, Ngin S, Walston J, Bourhy H, Serologic evidence of lyssavirus infection in bats, Cambodia, Emerging Infect. Dis. 2004 Dec;10(12):2231-4.

Guillemot D, Bonacorsi S, Blanchard JS, Weber P, Simon S, Guesnon B, Bingen E, Carbon C, Amoxicillin-clavulanate therapy increases childhood nasal colonization by methicillin-susceptible Staphylococcus aureus strains producing high levels of penicillinase, Antimicrob. Agents Chemother. 2004 Dec;48(12):4618-23.

Van Immerseel F, Pasmans F, De Buck J, Rychlik I, Hradecka H, Collard JM, Wildemauwe C, Heyndrickx M, Ducatelle R, Haesebrouck F, Cats as a risk for transmission of antimicrobial drug-resistant Salmonella., Emerg Infect Dis 2004 Dec; 10(12): 2169-74.

Taha MK, Olcén P, , Molecular genetic methods in diagnosis and direct characterization of acute bacterial central nervous system infections., APMIS ; 112(11-12): 753-70.

Vray M, Joubert JM, Eschwège E, Liard F, Fagnani F, Commenges B, Steinberg G, Bégaud B, [Methodology and quality control in EPIGRAM, a pharmacoepidemiological study of obesity in general practice], Therapie 2004 Nov-Dec;59(6):573-9.

Dacheux L, Moreau A, Ataman-Onal Y, Biron F, Verrier B, Barin F, Evolutionary dynamics of the glycan shield of the human immunodeficiency virus envelope during natural infection and implications for exposure of the 2G12 epitope, J. Virol. 2004 Nov;78(22):12625-37.

Fisher IS, International trends in salmonella serotypes 1998-2003–a surveillance report from the Enter-net international surveillance network., Euro Surveill 2004 Nov; 9(11): 45-7.

Fisher IS, Dramatic shift in the epidemiology of Salmonella enterica serotype Enteritidis phage types in western Europe, 1998-2003–results from the Enter-net international salmonella database., Euro Surveill 2004 Nov; 9(11): 43-5.

Beq S, Fontanet A, Theze J, Colle JH, IL-7 and Flt-3L plasma levels are increased during highly active antiretroviral therapy-associated IL-2 therapy, AIDS 2004 Oct;18(15):2089-91.

Hensen K, Braem C, Declercq J, Van Dyck F, Dewerchin M, Fiette L, Denef C, Van de Ven WJ, Targeted disruption of the murine Plag1 proto-oncogene causes growth retardation and reduced fertility, Dev. Growth Differ. 2004 Oct;46(5):459-70.

Doublet B, Weill FX, Fabre L, Chaslus-Dancla E, Cloeckaert A, Variant Salmonella genomic island 1 antibiotic resistance gene cluster containing a novel 3′-N-aminoglycoside acetyltransferase gene cassette, aac(3)-Id, in Salmonella enterica serovar newport, Antimicrob. Agents Chemother. 2004 Oct;48(10):3806-12.

Weill FX, Perrier-Gros-Claude JD, Demartin M, Coignard S, Grimont PA, Characterization of extended-spectrum-beta-lactamase (CTX-M-15)-producing strains of Salmonella enterica isolated in France and Senegal, FEMS Microbiol. Lett. 2004 Sep;238(2):353-8.

Taha MK, Giorgini D, Ducos-Galand M, Alonso JM, , Continuing diversification of Neisseria meningitidis W135 as a primary cause of meningococcal disease after emergence of the serogroup in 2000., J Clin Microbiol 2004 Sep; 42(9): 4158-63.

Giraud E, Blanc G, Bouju-Albert A, Weill FX, Donnay-Moreno C, Mechanisms of quinolone resistance and clonal relationship among Aeromonas salmonicida strains isolated from reared fish with furunculosis, J. Med. Microbiol. 2004 Sep;53(Pt 9):895-901.

Opinel A, Gachelin G, The Rockefeller Foundation and the prevention of malaria in Corsica, 1923-1951: support given to the French parasitologist Emile Brumpt, Parassitologia 2004 Sep;46(3):287-302.

Grodet C, Dequin PF, Watt S, Lanotte P, de Gialluly C, Taha MK, Alonso JM, Quentin R, Goudeau A, Mereghetti L, Outbreak in France of Neisseria meningitidis B:15:P1.12 belonging to sequence type 1403, Clin. Microbiol. Infect. 2004 Sep;10(9):845-8.

Deghmane AE, Giorgini D, Maigre L, Taha MK, , Analysis in vitro and in vivo of the transcriptional regulator CrgA of Neisseria meningitidis upon contact with target cells., Mol Microbiol 2004 Aug; 53(3): 917-27.

Bay S, Huteau V, Zarantonelli ML, Pires R, Ughetto-Monfrin J, Taha MK, England P, Lafaye P, , Phosphorylcholine-carbohydrate-protein conjugates efficiently induce hapten-specific antibodies which recognize both Streptococcus pneumoniae and Neisseria meningitidis: a potential multitarget vaccine against respiratory infections., J Med Chem 2004 Jul; 47(16): 3916-9.

Sommet A, Sermet C, Boëlle PY, Tafflet M, Bernède C, Guillemot D, No significant decrease in antibiotic use from 1992 to 2000, in the French community, J. Antimicrob. Chemother. 2004 Aug;54(2):524-8.

Weill FX, Demartin M, Fabre L, Grimont PA, Extended-spectrum-beta-lactamase (TEM-52)-producing strains of Salmonella enterica of various serotypes isolated in France, J. Clin. Microbiol. 2004 Jul;42(7):3359-62.

Faye A, Marianni-Kurkdjian P, Taha MK, Soussan V, Bingen E, Bourrillon A, [Meningococcal disease due to Neisseria meningitidis serogroup W135 in children. Clinical aspects and outcome], Presse Med 2004 Jun;33(10):654-7.

Weill FX, Demartin M, Tandé D, Espié E, Rakotoarivony I, Grimont PA, SHV-12-like extended-spectrum-beta-lactamase-producing strains of Salmonella enterica serotypes Babelsberg and Enteritidis isolated in France among infants adopted from Mali, J. Clin. Microbiol. 2004 Jun;42(6):2432-7.

Kassis R, Larrous F, Estaquier J, Bourhy H, Lyssavirus matrix protein induces apoptosis by a TRAIL-dependent mechanism involving caspase-8 activation, J. Virol. 2004 Jun;78(12):6543-55.

Madec Y, Japhet C, First passage time problem for a drifted Ornstein-Uhlenbeck process, Math Biosci 2004 Jun;189(2):131-40.

Faye A, Mariani-Kurkdjian P, Taha MK, Angoulvant F, Antonios M, Aubertin G, Soussan V, Bingen E, Bourrillon A, Clinical features and outcome of pediatric Neisseria meningitidis serogroup W135 infection: a report of 5 cases, Clin. Infect. Dis. 2004 Jun;38(11):1635-7.

Vray M, Girault D, Hoog-Labouret N, Porcher R, Thalabard JC, , Methodology for small clinical trials, Therapie 2004 May-Jun;59(3):273-9, 281-6.

Pasmans F, Van Immerseel F, Hermans K, Heyndrickx M, Collard JM, Ducatelle R, Haesebrouck F, Assessment of virulence of pigeon isolates of Salmonella enterica subsp. enterica serovar typhimurium variant copenhagen for humans., J Clin Microbiol 2004 May; 42(5): 2000-2.

Gougeon ML, Pénicaud L, Fromenty B, Leclercq P, Viard JP, Capeau J, Adipocytes targets and actors in the pathogenesis of HIV-associated lipodystrophy and metabolic alterations, Antivir. Ther. (Lond.) 2004 Apr;9(2):161-77.

Doublet B, Butaye P, Imberechts H, Collard JM, Chaslus-Dancla E, Cloeckaert A, Salmonella agona harboring genomic island 1-A., Emerg Infect Dis 2004 Apr; 10(4): 756-8.

Robert-Pillot A, Guénolé A, Lesne J, Delesmont R, Fournier JM, Quilici ML, Occurrence of the tdh and trh genes in Vibrio parahaemolyticus isolates from waters and raw shellfish collected in two French coastal areas and from seafood imported into France, Int. J. Food Microbiol. 2004 Mar;91(3):319-25.

Camus-Bouclainville C, Fiette L, Bouchiha S, Pignolet B, Counor D, Filipe C, Gelfi J, Messud-Petit F, A virulence factor of myxoma virus colocalizes with NF-kappaB in the nucleus and interferes with inflammation, J. Virol. 2004 Mar;78(5):2510-6.

Huys G, D'Haene K, Collard JM, Swings J, Prevalence and molecular characterization of tetracycline resistance in Enterococcus isolates from food., Appl Environ Microbiol 2004 Mar; 70(3): 1555-62.

Beq S, Rannou MT, Fontanet A, Delfraissy JF, Thèze J, Colle JH, HIV infection: pre-highly active antiretroviral therapy IL-7 plasma levels correlate with long-term CD4 cell count increase after treatment, AIDS 2004 Feb;18(3):563-5.

Lengagne R, Le Gal FA, Garcette M, Fiette L, Ave P, Kato M, Briand JP, Massot C, Nakashima I, Rénia L, Guillet JG, Prévost-Blondel A, Spontaneous vitiligo in an animal model for human melanoma: role of tumor-specific CD8+ T cells, Cancer Res. 2004 Feb;64(4):1496-501.

Halpern MT, Schmier JK, Van Kerkhove MD, Watkins M, Kalberg CJ, Impact of long-term inhaled corticosteroid therapy on bone mineral density: results of a meta-analysis, Ann. Allergy Asthma Immunol. 2004 Feb;92(2):201-7; quiz 207-8, 267.

Baroukh N, Lopez CE, Saleh MC, Recalde D, Vergnes L, Ostos MA, Fiette L, Fruchart JC, Castro G, Zakin MM, Ochoa A, Expression and secretion of human apolipoprotein A-I in the heart, FEBS Lett. 2004 Jan;557(1-3):39-44.

Wybot I, Wildemauwe C, Godard C, Bertrand S, Collard JM, Antimicrobial drug resistance in nontyphoid human Salmonella in Belgium: trends for the period 2000-2002., Acta Clin Belg 2004 ; 59(3): 152-60.

Guillaume G, Ledent V, Moens W, Collard JM, Phylogeny of efflux-mediated tetracycline resistance genes and related proteins revisited., Microb Drug Resist 2004 ; 10(1): 11-26.

Wybo I, Potters D, Plaskie K, Covens L, Collard JM, Lauwers S, Salmonella enterica subspecies houtenae serotype 44:z4, z23:–as a rare cause of meningitis., Acta Clin Belg 2004 ; 59(4): 232-4.

Vienne P, Ducos-Galand M, Guiyoule A, Pires R, Giorgini D, Taha MK, Alonso JM, , The role of particular strains of Neisseria meningitidis in meningococcal arthritis, pericarditis, and pneumonia., Clin Infect Dis 2003 Dec; 37(12): 1639-42.

Sidikou F, Djibo S, Taha MK, Alonso JM, Djibo A, Kairo KK, Chanteau S, Boisier P, Polymerase chain reaction assay and bacterial meningitis surveillance in remote areas, Niger, Emerging Infect. Dis. 2003 Nov;9(11):1486-8.

Alonso JM, Taha MK, [Respiratory virosis and invasive bacterial superinfections. The case for influenza and meningococcal diseases], Arch Pediatr 2003 Nov;10(11):1013-5.

Vázquez JA, Arreaza L, Block C, Ehrhard I, Gray SJ, Heuberger S, Hoffmann S, Kriz P, Nicolas P, Olcen P, Skoczynska A, Spanjaard L, Stefanelli P, Taha MK, Tzanakaki G, Interlaboratory comparison of agar dilution and Etest methods for determining the MICs of antibiotics used in management of Neisseria meningitidis infections, Antimicrob. Agents Chemother. 2003 Nov;47(11):3430-4.

Zarantonelli ML, Carlier JP, Alonso JM, Taha MK, , Insertional inactivation of the lpxA gene involved in the biosynthesis of lipid A in Neisseria meningitidis resulted in lpxA/lpxA::aph-3′ heterodiploids., FEMS Microbiol Lett 2003 Sep; 226(1): 51-6.

Antignac A, Ducos-Galand M, Guiyoule A, Pirès R, Alonso JM, Taha MK, , Neisseria meningitidis strains isolated from invasive infections in France (1999-2002): phenotypes and antibiotic susceptibility patterns., Clin Infect Dis 2003 Oct; 37(7): 912-20.

Truong LX, Luong TT, Scott-Algara D, Versmisse P, David A, Perez-Bercoff D, Nguyen NV, Tran HK, Cao CT, Fontanet A, Follézou JY, Theodorou I, Barré-Sinoussi F, Pancino G, CD4 cell and CD8 cell-mediated resistance to HIV-1 infection in exposed uninfected intravascular drug users in Vietnam., AIDS 2003 Jul; 17(10): 1425-34.

Renault PA, Vargas C, Tachet A, Tattevin P, Najman A, Quilici ML, Fournier JM, [Vibrio vulnificus septicemia transmitted through a wound caused by a crustacea], Presse Med 2003 Jun;32(22):1028-30.

Antignac A, Rousselle JC, Namane A, Labigne A, Taha MK, Boneca IG, , Detailed structural analysis of the peptidoglycan of the human pathogen Neisseria meningitidis., J Biol Chem 2003 Aug; 278(34): 31521-8.

Antignac A, Boneca IG, Rousselle JC, Namane A, Carlier JP, Vázquez JA, Fox A, Alonso JM, Taha MK, , Correlation between alterations of the penicillin-binding protein 2 and modifications of the peptidoglycan structure in Neisseria meningitidis with reduced susceptibility to penicillin G., J Biol Chem 2003 Aug; 278(34): 31529-35.

Girardin SE, Boneca IG, Carneiro LA, Antignac A, Jéhanno M, Viala J, Tedin K, Taha MK, Labigne A, Zähringer U, Coyle AJ, DiStefano PS, Bertin J, Sansonetti PJ, Philpott DJ, , Nod1 detects a unique muropeptide from gram-negative bacterial peptidoglycan., Science 2003 Jun; 300(5625): 1584-7.

Saleh MC, Espinosa de los Monteros A, de Arriba Zerpa GA, Fontaine I, Piaud O, Djordjijevic D, Baroukh N, Garcia Otin AL, Ortiz E, Lewis S, Fiette L, Santambrogio P, Belzung C, Connor JR, de Vellis J, Pasquini JM, Zakin MM, Baron B, Guillou F, Myelination and motor coordination are increased in transferrin transgenic mice, J. Neurosci. Res. 2003 Jun;72(5):587-94.

Farmachidi JP, Sobesky R, Boussougant Y, Quilici ML, Coffin B, Septicaemia and liver abscesses secondary to non-O1/non-O139 Vibrio cholerae colitis, Eur J Gastroenterol Hepatol 2003 Jun;15(6):699-700.

Alonso JM, Guiyoule A, Zarantonelli ML, Ramisse F, Pires R, Antignac A, Deghmane AE, Huerre M, van der Werf S, Taha MK, , A model of meningococcal bacteremia after respiratory superinfection in influenza A virus-infected mice., FEMS Microbiol Lett 2003 May; 222(1): 99-106.

Deghmane AE, Larribe M, Giorgini D, Sabino D, Taha MK, , Differential expression of genes that harbor a common regulatory element in Neisseria meningitidis upon contact with target cells., Infect Immun 2003 May; 71(5): 2897-901.

Chamond N, Grégoire C, Coatnoan N, Rougeot C, Freitas-Junior LH, da Silveira JF, Degrave WM, Minoprio P, Biochemical characterization of proline racemases from the human protozoan parasite Trypanosoma cruzi and definition of putative protein signatures, J. Biol. Chem. 2003 May;278(18):15484-94.

Sun CM, Fiette L, Tanguy M, Leclerc C, Lo-Man R, Ontogeny and innate properties of neonatal dendritic cells, Blood 2003 Jul;102(2):585-91.

Vandenbogaert M, Makeev V, Analysis of bacterial RM-systems through genome-scale analysis and related taxonomy issues, In Silico Biol. (Gedrukt) 2003;3(1-2):127-43.

Deghmane AE, Taha MK, , The Neisseria meningitidis adhesion regulatory protein CrgA acts through oligomerization and interaction with RNA polymerase., Mol Microbiol 2003 Jan; 47(1): 135-43.

Boël G, Mijakovic I, Mazé A, Poncet S, Taha MK, Larribe M, Darbon E, Khemiri A, Galinier A, Deutscher J, Transcription regulators potentially controlled by HPr kinase/phosphorylase in Gram-negative bacteria, J. Mol. Microbiol. Biotechnol. 2003;5(4):206-15.

Ledru E, Février M, Lecoeur H, Garcia S, Boullier S, Gougeon ML, A nonsecreted variant of interleukin-4 is associated with apoptosis: implication for the T helper-2 polarization in HIV infection, Blood 2003 Apr;101(8):3102-5.

du Châtelet IP, Alonso JM, Taha MK, [Clonal expansion of Neisseria meningitidis W135. Epidemiological implications for the African meningitis belt], Bull Soc Pathol Exot 2002 Dec;95(5):323-4; discussion 324-5.

van Overbeek LS, Wellington EM, Egan S, Smalla K, Heuer H, Collard JM, Guillaume G, Karagouni AD, Nikolakopoulou TL, van Elsas JD, Prevalence of streptomycin-resistance genes in bacterial populations in European habitats., FEMS Microbiol Ecol 2002 Nov; 42(2): 277-88.

Heuer H, Krögerrecklenfort E, Wellington EM, Egan S, van Elsas JD, van Overbeek L, Collard JM, Guillaume G, Karagouni AD, Nikolakopoulou TL, Smalla K, , Gentamicin resistance genes in environmental bacteria: prevalence and transfer., FEMS Microbiol Ecol 2002 Nov; 42(2): 289-302.

Guillemot D, Crémieux AC, Courvalin P, Evolution of antimicrobial resistance: impact on antibiotic use, Semin Respir Crit Care Med 2002 Oct;23(5):449-56.

Chamond N, Coatnoan N, Minoprio P, Immunotherapy of Trypanosoma cruzi infections, Curr. Drug Targets Immune Endocr. Metabol. Disord. 2002 Oct;2(3):247-54.

Waghabi MC, Coutinho CM, Soeiro MN, Pereira MC, Feige JJ, Keramidas M, Cosson A, Minoprio P, Van Leuven F, Araújo-Jorge TC, Increased Trypanosoma cruzi invasion and heart fibrosis associated with high transforming growth factor beta levels in mice deficient in alpha(2)-macroglobulin, Infect. Immun. 2002 Sep;70(9):5115-23.

Taha MK, Deghmane AE, Antignac A, Zarantonelli ML, Larribe M, Alonso JM, , The duality of virulence and transmissibility in Neisseria meningitidis., Trends Microbiol 2002 Aug; 10(8): 376-82.

Lecoeur H, de Oliveira-Pinto LM, Gougeon ML, Multiparametric flow cytometric analysis of biochemical and functional events associated with apoptosis and oncosis using the 7-aminoactinomycin D assay, J. Immunol. Methods 2002 Jul;265(1-2):81-96.

DeJoseph M, Taylor RS, Baker M, Aregullin M, Fur-rubbing behavior of capuchin monkeys, J. Am. Acad. Dermatol. 2002 Jun;46(6):924-5.

Lévy-Bruhl D, Perrocheau A, Mora M, Taha MK, Dromell-Chabrier S, Beytout J, Quatresous I, Vaccination campaign following an increase in incidence of serogroup C meningococcal diseases in the department of Puy-de-Dôme (France), Euro Surveill. 2002 May;7(5):74-6.

Coffinier C, Gresh L, Fiette L, Tronche F, Schütz G, Babinet C, Pontoglio M, Yaniv M, Barra J, Bile system morphogenesis defects and liver dysfunction upon targeted deletion of HNF1beta, Development 2002 Apr;129(8):1829-38.

Robert-Pillot A, Baron S, Lesne J, Fournier JM, Quilici ML, Improved specific detection of Vibrio cholerae in environmental water samples by culture on selective medium and colony hybridization assay with an oligonucleotide probe, FEMS Microbiol. Ecol. 2002 Apr;40(1):39-46.

de Oliveira Pinto LM, Garcia S, Lecoeur H, Rapp C, Gougeon ML, Increased sensitivity of T lymphocytes to tumor necrosis factor receptor 1 (TNFR1)- and TNFR2-mediated apoptosis in HIV infection: relation to expression of Bcl-2 and active caspase-8 and caspase-3, Blood 2002 Mar;99(5):1666-75.

Taha MK, , Molecular detection and characterization of Neisseria meningitidis., Expert Rev Mol Diagn 2002 Mar; 2(2): 143-50.

Taha MK, Parent Du Chatelet I, Schlumberger M, Sanou I, Djibo S, de Chabalier F, Alonso JM, , Neisseria meningitidis serogroups W135 and A were equally prevalent among meningitis cases occurring at the end of the 2001 epidemics in Burkina Faso and Niger., J Clin Microbiol 2002 Mar; 40(3): 1083-4.

Jiao X, Lo-Man R, Guermonprez P, Fiette L, Dériaud E, Burgaud S, Gicquel B, Winter N, Leclerc C, Dendritic cells are host cells for mycobacteria in vivo that trigger innate and acquired immunity., J Immunol 2002 Feb; 168(3): 1294-301.

Cartron G, Dacheux L, Salles G, Solal-Celigny P, Bardos P, Colombat P, Watier H, Therapeutic activity of humanized anti-CD20 monoclonal antibody and polymorphism in IgG Fc receptor FcgammaRIIIa gene, Blood 2002 Feb;99(3):754-8.

Deubel V, Fiette L, Gounon P, Drouet MT, Khun H, Huerre M, Banet C, Malkinson M, Desprès P, Variations in biological features of West Nile viruses, Ann. N. Y. Acad. Sci. 2001 Dec;951:195-206.

Minoprio P, Parasite polyclonal activators: new targets for vaccination approaches?, Int. J. Parasitol. 2001 May;31(5-6):588-91.

Antignac A, Kriz P, Tzanakaki G, Alonso JM, Taha MK, Polymorphism of Neisseria meningitidis penA gene associated with reduced susceptibility to penicillin, J. Antimicrob. Chemother. 2001 Mar;47(3):285-96.

Reddy J, Chastagner P, Fiette L, Liu X, Thèze J, IL-2-induced tumor necrosis factor (TNF)-beta expression: further analysis in the IL-2 knockout model, and comparison with TNF-alpha, lymphotoxin-beta, TNFR1 and TNFR2 modulation, Int. Immunol. 2001 Feb;13(2):135-47.

Santos-Lima EC, Vasconcellos R, Reina-San-Martín B, Fesel C, Cordeiro-Da-Silva A, Berneman A, Cosson A, Coutinho A, Minoprio P, Significant association between the skewed natural antibody repertoire of Xid mice and resistance to Trypanosoma cruzi infection, Eur. J. Immunol. 2001 Feb;31(2):634-45.

Taha MK, Achtman M, Alonso JM, Greenwood B, Ramsay M, Fox A, Gray S, Kaczmarski E, Serogroup W135 meningococcal disease in Hajj pilgrims, Lancet 2000 Dec 23-30;356(9248):2159.

Klochendler-Yeivin A, Fiette L, Barra J, Muchardt C, Babinet C, Yaniv M, The murine SNF5/INI1 chromatin remodeling factor is essential for embryonic development and tumor suppression, EMBO Rep. 2000 Dec;1(6):500-6.

Weitzman JB, Fiette L, Matsuo K, Yaniv M, JunD protects cells from p53-dependent senescence and apoptosis, Mol. Cell 2000 Nov;6(5):1109-19.

Guardabassi L, Dijkshoorn L, Collard JM, Olsen JE, Dalsgaard A, Distribution and in-vitro transfer of tetracycline resistance determinants in clinical and aquatic Acinetobacter strains., J Med Microbiol 2000 Oct; 49(10): 929-936.

Thomas JD, La Fiette MH, Quinn VR, Riley EP, Neonatal choline supplementation ameliorates the effects of prenatal alcohol exposure on a discrimination learning task in rats, Neurotoxicol Teratol 2000 Sep-Oct;22(5):703-11.

Reina-San-Martín B, Degrave W, Rougeot C, Cosson A, Chamond N, Cordeiro-Da-Silva A, Arala-Chaves M, Coutinho A, Minoprio P, A B-cell mitogen from a pathogenic trypanosome is a eukaryotic proline racemase, Nat. Med. 2000 Aug;6(8):890-7.

Ninin E, Caroff N, El Kouri D, Espaze E, Richet H, Quilici ML, Fournier JM, Nontoxigenic vibrio Cholerae O1 bacteremia: case report and review, Eur. J. Clin. Microbiol. Infect. Dis. 2000 Jun;19(6):489-91.

Kazanji M, Ureta-Vidal A, Ozden S, Tangy F, de Thoisy B, Fiette L, Talarmin A, Gessain A, de Thé G, Lymphoid organs as a major reservoir for human T-cell leukemia virus type 1 in experimentally infected squirrel monkeys (Saimiri sciureus): provirus expression, persistence, and humoral and cellular immune responses, J. Virol. 2000 May;74(10):4860-7.

Guillaume G, Verbrugge D, Chasseur-Libotte M, Moens W, Collard J, PCR typing of tetracycline resistance determinants (Tet A-E) in Salmonella enterica serotype Hadar and in the microbial community of activated sludges from hospital and urban wastewater treatment facilities in Belgium., FEMS Microbiol Ecol 2000 Apr; 32(1): 77-85.

Deghmane AE, Petit S, Topilko A, Pereira Y, Giorgini D, Larribe M, Taha MK, Intimate adhesion of Neisseria meningitidis to human epithelial cells is under the control of the crgA gene, a novel LysR-type transcriptional regulator, EMBO J. 2000 Mar;19(5):1068-78.

Reina-San-Martin B, Cosson A, Minoprio P, Lymphocyte polyclonal activation: a pitfall for vaccine design against infectious agents, Parasitol. Today (Regul. Ed.) 2000 Feb;16(2):62-7.

Sato MN, Minoprio P, Avrameas S, Ternynck T, Changes in the cytokine profile of lupus-prone mice (NZB/NZW)F1 induced by Plasmodium chabaudi and their implications in the reversal of clinical symptoms, Clin. Exp. Immunol. 2000 Feb;119(2):333-9.

Taha MK, Simultaneous approach for nonculture PCR-based identification and serogroup prediction of Neisseria meningitidis, J. Clin. Microbiol. 2000 Feb;38(2):855-7.

Taha MK, Neisseria meningitidis induces the expression of the TNF-alpha gene in endothelial cells, Cytokine 2000 Jan;12(1):21-5.

Moreau MF, Thibaud JL, Miled LB, Chaussepied M, Baumgartner M, Davis WC, Minoprio P, Langsley G, Theileria annulata in CD5(+) macrophages and B1 B cells, Infect. Immun. 1999 Dec;67(12):6678-82.

Montes CL, Zuñiga E, Minoprio P, Vottero-Cima E, Gruppi A, A Trypanosoma cruzi alkaline antigen induces polyclonal B-cell activation of normal murine spleen cells by T-cell-independent, BCR-directed stimulation, Scand. J. Immunol. 1999 Aug;50(2):159-66.

Doblhoff-Dier O, Bachmayer H, Bennett A, Brunius G, Bürki K, Cantley M, Collins C, Crooy P, Elmqvist A, Frontali-Botti C, Havenaar R, Haymerle H, Lelieveld H, Lex M, Mahler JL, Martinez L, Mosgaard C, Olsen L, Pazlarova J, Rudan F, Sarvas M, Stepankova H, Tzotzos G, Wagner K, Werner R, Safe biotechnology 9: values in risk assessment for the environmental application of microorganisms. The Safety in Biotechnology Working Party of the European Federation of Biotechnology., Trends Biotechnol 1999 Aug; 17(8): 307-11.

Duval P, Champetier de Ribes G, Ranjalahy J, Quilici ML, Fournier JM, Cholera in Madagascar, Lancet 1999 Jun;353(9169):2068.

Stengel B, Watier L, Chouquet C, Cénée S, Philippon C, Hémon D, Influence of renal biomarker variability on the design and interpretation of occupational or environmental studies, Toxicol. Lett. 1999 May;106(1):69-77.

Benavides F, Giordano M, Fiette L, Bueno Brunialti AL, Martin Palenzuela N, Vanzulli S, Baldi P, Schmidt R, Dosne Pasqualini C, Guénet J, Nackt (nkt), a new hair loss mutation of the mouse with associated CD4 deficiency, Immunogenetics 1999 May;49(5):413-9.

Kriz P, Giorgini D, Musilek M, Larribe M, Taha MK, Microevolution through DNA exchange among strains of Neisseria meningitidis isolated during an outbreak in the Czech Republic, Res. Microbiol. 1999 May;150(4):273-80.

Gomes YM, Abath FG, Nakazawa M, Minoprio P, Vouldoukis I, Monjour L, Partial protection of mice against Trypanosoma cruzi after immunizing with the TcY 72 antigenic preparation, Mem. Inst. Oswaldo Cruz 1999 Mar-Apr;94(2):167-72.

Gaubert S, Viana da Costa A, Maurage CA, Lima EC, Fontaine J, Lafitte S, Minoprio P, Capron A, Grzych JM, X-linked immunodeficiency affects the outcome of Schistosoma mansoni infection in the murine model, Parasite Immunol. 1999 Feb;21(2):89-101.

Giles-Vernick T, Leaving a person behind: history, personhood, and struggles over forest resources in the Sangha Basin of Equatorial Africa, Int J Afr Hist Stud 1999;32(2-3):311-38.

Germani Y, Quilici ML, Glaziou P, Mattera D, Morvan J, Fournier JM, Emergence of cholera in the Central African Republic, Eur. J. Clin. Microbiol. Infect. Dis. 1998 Dec;17(12):888-90.

Demaison C, Fiette L, Blanchetière V, Schimpl A, Thèze J, Froussard P, IL-2 receptor alpha-chain expression is independently regulated in primary and secondary lymphoid organs, J. Immunol. 1998 Aug;161(4):1977-82.

Da Silva AC, Espinoza AG, Taibi A, Ouaissi A, Minoprio P, A 24,000 MW Trypanosoma cruzi antigen is a B-cell activator, Immunology 1998 Jun;94(2):189-96.

Taha MK, Morand PC, Pereira Y, Eugène E, Giorgini D, Larribe M, Nassif X, Pilus-mediated adhesion of Neisseria meningitidis: the essential role of cell contact-dependent transcriptional upregulation of the PilC1 protein, Mol. Microbiol. 1998 Jun;28(6):1153-63.

Blachier F, Briand D, Selamnia M, Robert V, Guihot G, Mayeur C, Differential inhibitory effects of three nitric oxide donors on ornithine decarboxylase activity in human colon carcinoma cells, Biochem. Pharmacol. 1998 Apr;55(8):1235-9.

Musilek M, Giorgini D, Hamadouche N, Kriz P, Taha MK, Genetic heterogeneity of strains of Neisseria meningitidis belonging to serotype 22 isolated in the Czech Republic, J. Clin. Microbiol. 1998 Feb;36(2):563-5.

Cassia R, Besnard L, Fiette L, Espinosa de los Monteros A, Avé P, Py MC, Huerre M, de Vellis J, Zakin MM, Guillou F, Transferrin is an early marker of hepatic differentiation, and its expression correlates with the postnatal development of oligodendrocytes in mice, J. Neurosci. Res. 1997 Nov;50(3):421-32.

Watier L, Richardson S, Hémon D, Accounting for pregnancy dependence in epidemiologic studies of reproductive outcomes, Epidemiology 1997 Nov;8(6):629-36.

Pron B, Taha MK, Rambaud C, Fournet JC, Pattey N, Monnet JP, Musilek M, Beretti JL, Nassif X, Interaction of Neisseria maningitidis with the components of the blood-brain barrier correlates with an increased expression of PilC, J. Infect. Dis. 1997 Nov;176(5):1285-92.

Giorgini D, Nassif X, Taha MK, [Rapid epidemiological characterization of Neisseria meningitidis using polymerization chain reaction from biological samplings], Presse Med 1997 Oct;26(32):1516-9.

Kazanji M, Ibrahim F, Fiette L, Bomford R, De Thé G, Role of the genetic background of rats in infection by HTLV-I and HTLV-II and in the development of associated diseases, Int. J. Cancer 1997 Sep;73(1):131-6.

Lelieveld HL, Bachmayer H, Boon B, Bennett A, Brunius G, Bürki K, Cantley M, Collard JM, Collins CH, Crooy P, Doblhoff-Dier O, Dubakiene R, Economidis I, Elmqvist A, Frontali-Botti C, Havenaar R, Haymerle H, Käppeli O, Leaver G, Lex M, Lund S, Mahler JL, Marris R, Martinez LJ, Zhilevicha A, Safe biotechnology. 8. Transport of infectious and biological materials. Working Party “Safety in Biotechnology” of the European Federation of Biotechnology., Appl Microbiol Biotechnol 1997 Aug; 48(2): 135-40.

Nassif X, Marceau M, Pujol C, Pron B, Beretti JL, Taha MK, Type-4 pili and meningococcal adhesiveness, Gene 1997 Jun;192(1):149-53.

Azoulay-Cayla A, Brahic M, Bureau JF, Bihl F, Dethlefs S, Fiette L, Jarousse N, Larsson-Sciard EL, Martinat C, McAllister A, Michiels T, Pena Rossi C, A genetic approach to study the pathogenesis of Theiler’s virus persistent infection, J. Neurovirol. 1997 May;3 Suppl 1:S55.

De Reuse H, Taha MK, RegF, an SspA homologue, regulates the expression of the Neisseria gonorrhoeae pilE gene, Res. Microbiol. 1997 May;148(4):289-303.

Larribe M, Taha MK, Topilko A, Marchal C, Control of Neisseria gonorrhoeae pilin gene expression by environmental factors: involvement of the pilA/pilB regulatory genes, Microbiology (Reading, Engl.) 1997 May;143 ( Pt 5):1757-64.

Guibourdenche M, Giorgini D, Guèye A, Larribe M, Riou JY, Taha MK, Genetic analysis of a meningococcal population based on polymorphism of the pilA-pilB locus: a molecular approach for meningococcal epidemiology, J. Clin. Microbiol. 1997 Mar;35(3):745-50.

Lima EC, Garcia I, Vicentelli MH, Vassalli P, Minoprio P, Evidence for a protective role of tumor necrosis factor in the acute phase of Trypanosoma cruzi infection in mice, Infect. Immun. 1997 Feb;65(2):457-65.

Cordeiro da Silva A, Lima EC, Vicentelli MH, Minoprio P, V beta 6-bearing T cells are involved in resistance to Trypanosoma cruzi infection in XID mice, Int. Immunol. 1996 Aug;8(8):1213-9.

Fiette L, Brahic M, Pena-Rossi C, Infection of class II-deficient mice by the DA strain of Theiler’s virus, J. Virol. 1996 Jul;70(7):4811-5.

Jungmann P, Freitas A, Bandeira A, Nobrega A, Coutinho A, Marcos MA, Minoprio P, Murine acariasis. II. Immunological dysfunction and evidence for chronic activation of Th-2 lymphocytes, Scand. J. Immunol. 1996 Jun;43(6):604-12.

Russo M, Starobinas N, Marcondes MC, Minoprio P, Honteyberie-Joskowicz M, The influence of T cell subsets on Trypanosoma cruzi multiplication in different organs, Immunol. Lett. 1996 Mar;49(3):163-8.

D'Império Lima MR, Alvarez JM, Furtado GC, Kipnis TL, Coutinho A, Minóprio P, Ig-isotype patterns of primary and secondary B cell responses to Plasmodium chabaudi chabaudi correlate with IFN-gamma and IL-4 cytokine production with CD45RB expression by CD4+ spleen cells, Scand. J. Immunol. 1996 Mar;43(3):263-70.

Taha MK, Giorgini D, Nassif X, The pilA regulatory gene modulates the pilus-mediated adhesion of Neisseria meningitidis by controlling the transcription of pilC1, Mol. Microbiol. 1996 Mar;19(5):1073-84.

Gueirard P, Minoprio P, Guiso N, Intranasal inoculation of Bordetella bronchiseptica in mice induces long-lasting antibody and T-cell mediated immune responses, Scand. J. Immunol. 1996 Feb;43(2):181-92.

Santos Lima EC, Minoprio P, Chagas’ disease is attenuated in mice lacking gamma delta T cells, Infect. Immun. 1996 Jan;64(1):215-21.

Giorgini D, Taha MK, Molecular typing of Neisseria meningitidis serogroup A using the polymerase chain reaction and restriction endonuclease pattern analysis, Mol. Cell. Probes 1995 Oct;9(5):297-306.

Castro AG, Minóprio P, Appelberg R, The relative impact of bacterial virulence and host genetic background on cytokine expression during Mycobacterium avium infection of mice, Immunology 1995 Aug;85(4):556-61.

Fiette L, Aubert C, Müller U, Huang S, Aguet M, Brahic M, Bureau JF, Theiler’s virus infection of 129Sv mice that lack the interferon alpha/beta or interferon gamma receptors, J. Exp. Med. 1995 Jun;181(6):2069-76.

Sato MN, Minoprio P, Avrameas S, Ternynck T, Defects in the regulation of anti-DNA antibody production in aged lupus-prone (NZB x NZW)F1 mice: analysis of T-cell lymphokine synthesis, Immunology 1995 May;85(1):26-32.

Castro AG, Silva RA, Minóprio P, Appelberg R, In vivo evidence for a non-T cell origin of interleukin-5, Scand. J. Immunol. 1995 Mar;41(3):288-92.

Taha MK, Giorgini D, Phosphorylation and functional analysis of PilA, a protein involved in the transcriptional regulation of the pilin gene in Neisseria gonorrhoeae, Mol. Microbiol. 1995 Feb;15(4):667-77.

Watier L, [Time series analysis of non-typhoid salmonella infections], Rev Epidemiol Sante Publique 1995;43(2):173-85.

Watier L, [A methodological review of specific techniques of time series analysis in epidemiology and public health], Rev Epidemiol Sante Publique 1995;43(2):162-72.

Appelberg R, Castro AG, Pedrosa J, Silva RA, Orme IM, Minóprio P, Role of gamma interferon and tumor necrosis factor alpha during T-cell-independent and -dependent phases of Mycobacterium avium infection, Infect. Immun. 1994 Sep;62(9):3962-71.

Eckwalanga M, Marussig M, Tavares MD, Bouanga JC, Hulier E, Pavlovitch JH, Minoprio P, Portnoï D, Rénia L, Mazier D, Murine AIDS protects mice against experimental cerebral malaria: down-regulation by interleukin 10 of a T-helper type 1 CD4+ cell-mediated pathology, Proc. Natl. Acad. Sci. U.S.A. 1994 Aug;91(17):8097-101.

Ibrahim F, Fiette L, Gessain A, Buisson N, de-Thé G, Bomford R, Infection of rats with human T-cell leukemia virus type-I: susceptibility of inbred strains, antibody response and provirus location, Int. J. Cancer 1994 Aug;58(3):446-51.

Collard JM, Corbisier P, Diels L, Dong Q, Jeanthon C, Mergeay M, Taghavi S, van der Lelie D, Wilmotte A, Wuertz S, Plasmids for heavy metal resistance in Alcaligenes eutrophus CH34: mechanisms and applications., FEMS Microbiol Rev 1994 Aug; 14(4): 405-14.

Appelberg R, Castro AG, Pedrosa J, Minóprio P, Role of interleukin-6 in the induction of protective T cells during mycobacterial infections in mice, Immunology 1994 Jul;82(3):361-4.

el-Cheikh MC, Dutra HS, Minóprio P, Borojevic R, Increase of B-lymphocyte number and activity during experimental murine schistosomiasis mansoni, Braz. J. Med. Biol. Res. 1994 Jul;27(7):1605-17.

Jarousse N, Fiette L, Grant RA, Hogle JM, McAllister A, Michiels T, Aubert C, Tangy F, Brahic M, Peña Rossi C, Chimeric Theiler’s virus with altered tropism for the central nervous system, J. Virol. 1994 May;68(5):2781-6.

Leite-de-Moraes MC, Coutinho A, Hontebeyrie-Joskowicz M, Minoprio P, Eisen H, Bandeira A, Skewed V beta TCR repertoire of CD8+ T cells in murine Trypanosoma cruzi infection, Int. Immunol. 1994 Mar;6(3):387-92.

Leite de Moraes MD, Minoprio P, Dy M, Dardenne M, Savino W, Hontebeyrie-Joskowicz M, Endogenous IL-10 and IFN-gamma production controls thymic cell proliferation in mice acutely infected by Trypanosoma cruzi, Scand. J. Immunol. 1994 Jan;39(1):51-8.

Watier L, Richardson S, Hubert B, Salmonella enteritidis infections in France and the United States: characterization by a deterministic model, Am J Public Health 1993 Dec;83(12):1694-700.

Minoprio P, el Cheikh MC, Murphy E, Hontebeyrie-Joskowicz M, Coffman R, Coutinho A, O'Garra A, Xid-associated resistance to experimental Chagas’ disease is IFN-gamma dependent, J. Immunol. 1993 Oct;151(8):4200-8.

Dijkmans R, Jagers A, Kreps S, Collard JM, Mergeay M, Rapid method for purification of soil DNA for hybridization and PCR analysis., Microb Releases 1993 Jun; 2(1): 29-34.

Collard JM, Provoost A, Taghavi S, Mergeay M, A new type of Alcaligenes eutrophus CH34 zinc resistance generated by mutations affecting regulation of the cnr cobalt-nickel resistance system., J Bacteriol 1993 Feb; 175(3): 779-84.

Fiette L, Aubert C, Brahic M, Rossi CP, Theiler’s virus infection of beta 2-microglobulin-deficient mice, J. Virol. 1993 Jan;67(1):589-92.

Taha MK, Larribe M, Dupuy B, Giorgini D, Marchal C, Role of pilA, an essential regulatory gene of Neisseria gonorrhoeae, in the stress response, J. Bacteriol. 1992 Sep;174(18):5978-81.

Hubert B, Watier L, Garnerin P, Richardson S, Meningococcal disease and influenza-like syndrome: a new approach to an old question, J. Infect. Dis. 1992 Sep;166(3):542-5.

el Cheikh MC, Hontebeyrie-Joskowicz M, Coutinho A, Minoprio P, CD5 B cells. Potential role in the (auto)immune responses to Trypanosoma cruzi infection, Ann. N. Y. Acad. Sci. 1992 May;651:557-63.

Arala-Chaves M, Lima MR, Coutinho A, Pena-Rossi C, Minoprio P, V-region-related and -unrelated immunosuppression accompanying infections, Mem. Inst. Oswaldo Cruz 1992;87 Suppl 5:35-41.

Pena Rossi C, McAllister A, Fiette L, Brahic M, Theiler’s virus infection induces a specific cytotoxic T lymphocyte response, Cell. Immunol. 1991 Dec;138(2):341-8.

Dupuy B, Taha MK, Pugsley AP, Marchal C, Neisseria gonorrhoeae prepilin export studied in Escherichia coli, J. Bacteriol. 1991 Dec;173(23):7589-98.

Watier L, Richardson S, Hubert B, A time series construction of an alert threshold with application to S. bovismorbificans in France, Stat Med 1991 Oct;10(10):1493-509.

Marchal C, Taha MK, Larribe M, Seifert HS, So M, [Molecular bases of virulence in Neisseria gonorrhoeae], Bull. Acad. Natl. Med. 1991 Jun-Jul;175(6):823-34.

Minoprio P, Coutinho A, Spinella S, Hontebeyrie-Joskowicz M, Xid immunodeficiency imparts increased parasite clearance and resistance to pathology in experimental Chagas’ disease, Int. Immunol. 1991 May;3(5):427-33.

Hontebeyrie-Joskowicz M, Minoprio P, Chagas’ disease: Trypanosoma cruzi vs. the host immune system, Res. Immunol. 1991 Feb;142(2):125-6.

Starobinas N, Russo M, Minoprio P, Hontebeyrie-Joskowicz M, Is TNF alpha involved in early susceptibility of Trypanosoma cruzi-infected C3H/He mice?, Res. Immunol. 1991 Feb;142(2):117-22.

Minoprio P, Chagas’ disease: CD5 B-cell-dependent Th2 pathology?, Res. Immunol. 1991 Feb;142(2):137-40.

Taha MK, Dupuy B, Saurin W, So M, Marchal C, Control of pilus expression in Neisseria gonorrhoeae as an original system in the family of two-component regulators, Mol. Microbiol. 1991 Jan;5(1):137-48.

Taha MK, Marchal C, Conservation of Neisseria gonorrhoeae pilus expression regulatory genes pilA and pilB in the genus Neisseria, Infect. Immun. 1990 Dec;58(12):4145-8.

Collard JM, Matagne RF, Isolation and genetic analysis of Chlamydomonas reinhardtii strains resistant to cadmium., Appl Environ Microbiol 1990 Jul; 56(7): 2051-5.

Minoprio P, Itohara S, Heusser C, Tonegawa S, Coutinho A, Immunobiology of murine T. cruzi infection: the predominance of parasite-nonspecific responses and the activation of TCRI T cells, Immunol. Rev. 1989 Dec;112:183-207.

Aida Y, Miyasaka M, Okada K, Onuma M, Kogure S, Suzuki M, Minoprio P, Levy D, Ikawa Y, Further phenotypic characterization of target cells for bovine leukemia virus experimental infection in sheep, Am. J. Vet. Res. 1989 Nov;50(11):1946-51.

Russo M, Starobinas N, Ribeiro-Dos-Santos R, Minoprio P, Eisen H, Hontebeyrie-Joskowicz M, Susceptible mice present higher macrophage activation than resistant mice during infections with myotropic strains of Trypanosoma cruzi, Parasite Immunol. 1989 Jul;11(4):385-95.

Minoprio P, Andrade L, Lembezat MP, Ozaki LS, Coutinho A, Indiscriminate representation of VH-gene families in the murine B lymphocyte responses to Trypanosoma cruzi, J. Immunol. 1989 Jun;142(11):4017-21.

Minoprio P, Bandeira A, Pereira P, Mota Santos T, Coutinho A, Preferential expansion of Ly-1 B and CD4- CD8- T cells in the polyclonal lymphocyte responses to murine T. cruzi infection, Int. Immunol. 1989;1(2):176-84.

Taha MK, So M, Seifert HS, Billyard E, Marchal C, Pilin expression in Neisseria gonorrhoeae is under both positive and negative transcriptional control, EMBO J. 1988 Dec;7(13):4367-78.

Minoprio P, Burlen O, Pereira P, Guilbert B, Andrade L, Hontebeyrie-Joskowicz M, Coutinho A, Most B cells in acute Trypanosoma cruzi infection lack parasite specificity, Scand. J. Immunol. 1988 Nov;28(5):553-61.

Minoprio P, Coutinho A, Lymphocyte subpopulations and clonal repertoires participate in immune response to acute T. cruzi infection, Mem. Inst. Oswaldo Cruz 1988 Nov;83 Suppl 1:356-9.

Russo M, Minoprio P, Coutinho A, Hontebeyrie-Joskowicz M, Depletion of L3T4+ T lymphocytes during acute Trypanosoma cruzi infection abolish macrophage and B lymphocyte activation but not tissue inflammatory reaction, Mem. Inst. Oswaldo Cruz 1988 Nov;83 Suppl 1:527-38.

Russo M, Starobinas N, Minoprio P, Coutinho A, Hontebeyrie-Joskowicz M, Parasitic load increases and myocardial inflammation decreases in Trypanosoma cruzi-infected mice after inactivation of helper T cells, Ann. Inst. Pasteur Immunol. 1988 May-Jun;139(3):225-36.

Minoprio P, Eisen H, Joskowicz M, Pereira P, Coutinho A, Suppression of polyclonal antibody production in Trypanosoma cruzi-infected mice by treatment with anti-L3T4 antibodies, J. Immunol. 1987 Jul;139(2):545-50.

Minoprio PM, Coutinho A, Joskowicz M, D'Imperio Lima MR, Eisen H, Polyclonal lymphocyte responses to murine Trypanosoma cruzi infection. II. Cytotoxic T lymphocytes, Scand. J. Immunol. 1986 Dec;24(6):669-79.

Minoprio PM, Eisen H, Forni L, D'Imperio Lima MR, Joskowicz M, Coutinho A, Polyclonal lymphocyte responses to murine Trypanosoma cruzi infection. I. Quantitation of both T- and B-cell responses, Scand. J. Immunol. 1986 Dec;24(6):661-8.

d'Imperio Lima MR, Eisen H, Minoprio P, Joskowicz M, Coutinho A, Persistence of polyclonal B cell activation with undetectable parasitemia in late stages of experimental Chagas’ disease, J. Immunol. 1986 Jul;137(1):353-6.

Hurt WC, Clinical oral medicine. An exciting facet of postdoctoral periodontic training., J Periodontol 1986 Jul; 57(7): 426-8.

Hopewell JW, Campling D, Calvo W, Reinhold HS, Wilkinson JH, Yeung TK, Vascular irradiation damage: its cellular basis and likely consequences, Br. J. Cancer Suppl. 1986;7:181-91.

Capron M, Carlier Y, Nzeyimana H, Minoprio P, Santoro F, Sellin B, Capron A, In vitro study of immunological events in human and experimental schistosomiasis: relationships between cytotoxic antibodies and circulating Schistosoma antigens, Parasite Immunol. 1980;2(3):223-35.

Briggs BA, , Perioperative cardiovascular morbidity and mortality., Int Anesthesiol Clin 1980 ; 18(3): 71-83.

Boegman RJ, Wood PL, Pinaud L, Increased axoplasmic flow associated with pargyline under conditions which induce a myopathy., Nature 1975 Jan; 253(5486): 51-2.