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Présentation
Coordination
Comité Scientifique
Équipes
Laboratory
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Génétique Humaine et Fonctions Cognitives
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Thomas Bourgeron
Laboratory
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Génomique Évolutive des Microbes
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Eduardo Rocha
Laboratory
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Imagerie et modélisation
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Christophe Zimmer
Laboratory
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Epidémiologie des Maladies Emergentes
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Arnaud Fontanet
Laboratory
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Bioinformatique structurale
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Michael Nilges
Laboratory
G5
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Génomique évolutive des virus à ARN
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Etienne Simon-Loriere
Platform
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Hub de Bioinformatique et Biostatistique
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Marie-Agnès Dillies
Laboratory
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Génétique Évolutive Humaine
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Lluis Quintana-Murci
Laboratory
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Modélisation Mathématique des Maladies Infectieuses
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Simon Cauchemez
Laboratory
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Régulation Spatiale des Génomes
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Romain Koszul
Laboratory
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Anthropologie et Ecologie de l’Emergence des Maladies
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Tamara Giles-Vernick
Platform
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Biomics
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Marc Monot
Platform
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Tech Lab
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Michael Nilges
Laboratory
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Analyse d’Images Biologiques
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Jean-Christophe Olivo-Marin
Group
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Dynamique des synapses et des circuits neuronaux
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David DiGregorio
Platform
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Pôle de Coordination de la Recherche Clinique
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Nathalie Jolly
Platform
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Plateforme de Cytométrie
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Sophie Novault
Laboratory
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Immunité innée
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James Di Santo
Laboratory
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Microenvironnement et immunité
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Gérard Eberl
Laboratory
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Biologie et Génétique de la Paroi Bactérienne
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Ivo Gomperts Boneca
Laboratory
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Écologie et Émergence des Pathogènes Transmis par les Arthropodes
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Anavaj Sakuntabhai
Laboratory
UMR
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Biologie des Infections
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Marc Lecuit
Laboratory
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InBio: Méthodes expérimentales et computationnelles pour la modélisation des processus cellulaires
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Grégory Batt
Laboratory
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Génétique Statistique
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Hugues Aschard
Laboratory
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Biomédecine Computationelle des Systèmes
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Benno Schwikowski
Laboratory
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Décision et processus Bayesiens
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Jean-Baptiste Masson
Laboratory
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Environnement et risques infectieux
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Jean-Claude Manuguerra
Laboratory
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Biologie cellulaire des Trypanosomes
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Philippe Bastin
Laboratory
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Plasticité du Génome Bactérien
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Didier Mazel
Laboratory
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Virologie structurale
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Félix Rey
Laboratory
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Arbovirus et Insectes Vecteurs (AIV)
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Anna-Bella Failloux
Laboratory
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Génétique des Biofilms
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Jean-Marc Ghigo
Laboratory
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Parasitologie moléculaire et Signalisation
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Gérald Spaeth
Laboratory
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Biologie et Pathogénicité fongiques
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Christophe D’Enfert
Laboratory
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Biologie des ARN des Pathogènes Fongiques
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Guilhem Janbon
Laboratory
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Perception & Action
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Pierre-Marie Lledo
Laboratory
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Neurobiologie intégrative des systèmes cholinergiques
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Uwe Maskos
UTechS
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Spectrométrie de Masse pour la Biologie (UTechS MSBio)
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Julia Chamot-Rooke
Laboratory
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Architecture et Dynamique des Macromolécules Biologiques
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Marc Delarue
Laboratory
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Mécanismes de l’hérédité épigénétique
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Germano Cecere
Laboratory
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Dynamique des Décisions de Développement chez la Drosophile
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François Schweisguth
Laboratory
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Dynamic Regulation of Morphogenesis
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Jérôme Gros
Laboratory
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Morphogenèse du coeur
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Sigolène Meilhac
Platform
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BioImagerie Ultrastructurale
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Adeline Mallet
UTechS
Platform
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BioImagerie Photonique (UTechS PBI)
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Spencer Shorte
Laboratory
G5
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Algorithmes pour les séquences biologiques
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Rayan Chikhi
Appels
Emplois
Funded Projects
2023
D2I PhD Project
- Juliette Bellangier (PhD Fellow) – Isabelle Rosinski-Chupin (IP) & Olivier Tenaillon (INSERM)
- Camille Schneider (PhD Fellow) – Sylvain Brisse (IP) & Lulla Opatowski (IP)
- Raphaël Malak (PhD Fellow) – Rayan Chikhi (IP) & Hugues Aschard (IP)
2022
D2I PhD Project
- Eli Barthome (PhD Fellow) – Richard Delorme (IP) & Thomas Bourgeron (IP)
- Laura Xénard (PhD Fellow) – Daria Bonazzi (IP) & Guillaume Duménil (IP)
- Mohamed Mounib Benimam (PhD Fellow) – Jean-Christophe Olivo-Marin (IP) & Lucie Peduto (IP)
- Alex Westbrook (PhD Fellow) – Julien Mozziconaci (MNHN/CNRS) & Romain Koszul (IP)
2021
G5 Research Project
- Machine Learning for Integrative Biology – Laura Cantini
- Evolutionary Dynamics of Infectious Diseases – Sebastian Duchene-Garzon
D2I PhD Project
- Simon Galmiche (PhD Fellow) – Arnaud Fontanet (IP) & Simon Cauchemez (IP)
- Mathilde Grimée (PhD Fellow) – Simon Cauchemez (IP) & Michael White (IP)
P2I Collaborative Research Project
- Merging quantitative imaging and statistical modeling to quantify the impact of dengue virus infection on mosquito blood-feeding behavior (BitesGoingViral). Felix Hol (IP), Louis Lambrechts (IP), Jean-Baptiste Masson (IP) and Christian Vestergaard (IP)
- Modelling the role of microbiota in the acquisition and transmission of antibiotic resistant pathogenic bacteria (MICROMOD). Béatrice Laroche (INRAE), Lulla Opatowski (IP) and Didier Guillemot (IP)
2020
G5 Research Project
- Infectious Disease Epidemiology – Michael White
- Comparative Functional Genomics – Camille Berthelot
D2I PhD Project
- Andrew Holtz (PhD Fellow) – Hervé Bourhy (IP) & Anna Zhukova (IP)
- Maria Lopopolo (PhD Fellow) – Nicolas Rascovan (IP) & Lluis Quintana-Murci (IP)
- Cantin Ortiz (PhD Fellow) Christoph Schmidt-Hieber (IP) & Uwe Maskos (IP)
- Viktoriia Gruss (PhD Fellow) Grégory Batt (IP) & Imane El-Meouche (IAME, INSERM/APHP)
P2I Collaborative Research Project
- Integrative genetics and brain research on autism/ neurodevelopmental disorders in france. Thomas Bourgeron (IP), Richard Delorme (AP-HP) and Jean-François Deleuze (CEA).
- Pluridisciplinary characterization of double-strand break repair at single-cell level. Guy-Franck Richard (IP) & Charles Baroud (IP).
- Artificial intelligence for antibiotic drugs (AI4AB). Ivo Gomperts Boneca (IP) Nathalie Aulner (IP), Spencer Shorte (IP), Soojin Jang (IP Korea) and Christophe Zimmer (IP)
2019
G5 Research Project
- Microbial Paleogenomics – Nicolas Rascovan
D2I PhD Project
- Vincent Mallet (PhD Fellow) – Michael Nilges (IP) & Jean-Philippe Vert (MINES ParisTech)
- Armin Shoushtarizadeh (PhD Fellow) – Thomas Gregor (IP) & Pablo Navarro-Gil (IP)
- Chiara Figazzolo (PhD Fellow) – Marcel Hollenstein (IP) & Paola Arimondo (IP)
- Mariana Gonzalez (PhD Fellow) – Arnaud Blondel (IP) & Pierre-Jean Corringer (IP)
P2I Collaborative Research Project
- Identifying Tunneling Nanotube-like Structures in the Developing Cerebellum. Chiara Zurzolo (IP) & Jean-Baptiste Masson (IP).
- Path2Resistance: Deciphering evolutionary trajectories to characterize emergence and dissemination of multidrug resistant Escherichia coli. Eduardo Rocha (IP), Philippe Glaser (IP), Amaury Lambert (CIRB, Collège de France), and Guillaume Achaz (CIRB, Collège de France).
- Computational analysis of 3D cell architecture : application in quantifying myocardium orientation at the cellular and tissue levels. Sigolène Meilhac (IP/Institut Imagine) & Jean-Christophe Olivo-Marin (IP)
- Aptamer-labeling as a strategy to determine the structure of macromolecular assemblies. Marcel Hollenstein (IP), Ricardo Pellarin (IP), Eric Durand (Inserm)
2018
P2I Collaborative Research Project
- Machine learning to get at the heart of diagnostic cardiology Sigolène Meilhac, G5 (IP/Imagine), Timothy Wai, G5 (IP), Christophe Zimmer Unit (IP), Francesca Raimondi (APHP/INSERM).
- HOST AND BACTERIAL FACTORS INVOLVED IN INVASIVE LISTERIOSIS Marc Lecuit Unit (IP/INSERM), Lluis Quintana Unit (IP/CNRS), Hugues Aschard, G5 (IP).
G5 Research Project
- Sequence Bioinformatics – Rayan Chikhi
D2I PhD Project
- Marie Morel (PhD Fellow) – Olivier Gascuel Unit, Etienne Simon Loriere G5 (IP).
- Robin Chalumeau (PhD Fellow) – Jean-Christophe Olivo-Marin Unit, Jost Eninnga Unit (IP).
2017
G5 Research Project
D2I PhD Project
- Jérémy CHOIN (PhD Fellow) – Lluis Quintana Unit, Antoine Gessain Unit (IP).
- Jonathan Bastard (PhD fellow) – Lulla Opatowski (Didier Guillemot Unit, IP), Laura Temime (Cnam).
P2I Collaborative Research Project
- Understanding whooping cough resurgence in Europe by combining genomic, epidemiological and sociological approaches Sylvain Brisse, Simon Cauchemez.
- Microbial and viral circulations among people and wild and domesticated animals in an ecotone, Democratic Republic of Congo (MICROTONE) IP: Tamara Giles-Vernick, Sean Kennedy, Etienne Simon-Lorière, Victor Narat, Romain Duda (postdoc fellow) Université Paris-Diderot : Guillaume Lachenal.