Jean-Baptiste Masson • Research - Institut Pasteur

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Pascale Bellamy

Lhousseine Touqui

Domaines Scientifiques

Maladies

Organismes

Applications

Technique

Domaines Scientifiques

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41 Publications

Présentation

Désolé, cet article est seulement disponible en Anglais Américain.

Tweets

Cours

Scientific Programming in Python

The ever growing usage of high throughput technologies in Biology is revolutionizing the life sciences and profoundly changing its practices. Scripting languages are used on a daily basis in life science labs in order […]

Hub de Bioinformatique et Biostatistique

Thomas Cokelaer

François Laurent

Jean-Baptiste Masson

2017-03-06 09:30:00 2017-03-18 17:00:00 Europe/Paris Scientific Programming in Python The ever growing usage of high throughput technologies in Biology is revolutionizing the life sciences and profoundly changing its practices. Scripting languages are used on a daily basis in life science labs in order […] 25 Rue du Dr Roux, 75015 Paris, France

Projets Transversaux

INCEPTION – INstitut Convergences pour l’étude de l’Émergence des Pathologies au Travers des Individus et des populatiONs

Désolé, cet article est seulement disponible en Anglais Américain.

Biologie quantitative

Le programme de biologie quantitative de l’Institut Pasteur est destiné à faciliter la recherche et l’éducation à l’interface entre la biologie et les sciences plus quantitatives. L’un des principaux objectifs de la biologie quantitative […]

Projets

(EN) Semi-automatic transfer function for virtual reality

(EN) Mohamed El Beheiry (PI)

(EN) Topological and statistical properties of neural connectomes

Christian Vestergaard (PI)

(EN) Congenital heart disease

Francesca Raimondi (PI)

Désolé, cet article est seulement disponible en Anglais Américain.

(EN) Modelling and diagnosing fetuses

Jean-Baptiste Masson (PI)

Désolé, cet article est seulement disponible en Anglais Américain.

Deciding in Complex Environments

Jean-Baptiste Masson (PI)

This project aims at understanding the dynamical behaviour of drosophila larva. The larva is a ~10000 neurons that exhibit complex behaviour dynamics in response to external stimuli and to possible internal states. This project is […]

Mapping Receptor Dynamics In Synapses

François Laurent (PI)

This project aims at understanding the synaptic environment at the single receptor scale. Now that large amounts of dynamical single molecule data are available and that single molecule science is slowly transitioning into a big […]

DIVA — Data Integration and Visualisation in Augmented and Virtual Environments

Jean-Baptiste Masson (PI)

A Unique Software Platform for Complex Image Analysis Using Virtual Reality DIVA (Data Integration and Visualization in Augmented and Virtual Environments) is a software platform jointly developed by the Decision and Bayesian Computation lab […]

Logiciel

Themis, Nyx, Japet & Héméré

François Laurent (PI)

Themis, Nyx, Japet & Héméré are the four software we will be developing starting in 2022 Themis will be a Julia library that generates greedy decision making from probability distribution of relevant summary statistics. […]

Genuage platform

Jean-Baptiste Masson (PI)

Genuage is a new open-source software platform, that enables the easy perception of, interaction with and analysis of multidimensional point clouds in virtual reality. Genuage is compatible with arbitrary multidimensional data and allows easy […]

TRamWAy platform

François Laurent (PI)

DIVA microscopy

Jean-Baptiste Masson (PI)

DIVA is a software platform that enhances the analysis of biomedical and microscopy images using virtual reality. It virtually places users inside rich 3D environments based on their experimentally acquired imaging data. Highly interactive, it […]

InferenceMAP

Jean-Baptiste Masson (PI)

InferenceMAP is a software aimed at analysing single molecule dynamics. InferenceMAP is based on Bayesian analysis of Random Walks and this version is focused on mapping Random Walks at the full cell scale in […]

Brevets

Method and device for monitoring detection of odours by moving animals or by moving apparatus in turbulent flows

This patent consist on the combine use of electronics and antenna of insects to measure odour on moving systems (alive or not). It allows the measure of odour paths. An example of odour path […]

Method, device, and computer program for locating an emitting source

The patent consists on a computational biomimetic strategy to search for cue emitting sources in turbulent flows. An example of implementation can be seen on the following video with a robot searching for a thermal source. […]

CV

Education and Academic Positions

2008- … Research Scientist (Tenure) Pasteur Institute
2016-… Visiting Scientist Janelia
2014-2016 Invited Visiting Scientist Janelia Research Campus (on Campus)
2014 Invited Visiting Scientist Institut Curie (Dahan’s lab-6 months)
2009 Invited Visiting Scientist KITP (3 months)
2004-2007: PhD: “Ionics constrast terahertz imaging – Statistical Physics of Surface Plasmon-Polariton”, LOB at Polytechnique under the supervision of Guilhem Gallot
2002-2004 : Magistères (undergraduate + graduate) Theoretical physics (Astrophysics, Quantum field theory, Statistical Physics) at ENS-Lyon: with honours
2000-2002 : Classe Préparatoire aux grandes écoles PC^* : admitted Ecole Polytechnique, Ecole Normale Supérieure de Lyon

Recent Talks

Cellular Mapping/InferenceMAP: Talk_InferenceMAP
Searching in Random Environments: Talk_Searching_Environments

Publications

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Publié le: 22 Sep 2015 • Modifié le: 06 Apr 2021

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