Simon Cauchemez joined Institut Pasteur in 2013 to head Mathematical Modelling of Infectious Diseases Unit. The main research objective of his unit is to develop state-of-the-art statistical and mathematical methods to address these challenges, with the aim to increase the understanding of how pathogens spread in human populations as well as the impact of interventions, to support policy making and optimize control strategies. His approach is highly multidisciplinary, looking at infectious diseases through multiple perspectives (statistics, modelling, epidemiology, surveillance, Public Health, policy making, microbiology), multiple scales and multiple data streams. Before joining Institut Pasteur, Simon Cauchemez was working in the Department of Infectious Disease Epidemiology at Imperial College London.
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2023Impact and mitigation of sampling bias to determine viral spread: Evaluating discrete phylogeography through CTMC modeling and structured coalescent model approximations., Virus Evol 2023 ; 9(1): vead010.
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2023Modelling the end of a Zero-COVID strategy using nirmatrelvir/ritonavir, vaccination and NPIs in Wallis and Futuna., Lancet Reg Health West Pac 2023 Jan; 30(): 100634.
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2022Transmission dynamics of Q fever in French Guiana: A population-based cross-sectional study., Lancet Reg Health Am 2022 Dec; 16(): 100385.
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2022Analytical framework to evaluate and optimize the use of imperfect diagnostics to inform outbreak response: Application to the 2017 plague epidemic in Madagascar., PLoS Biol 2022 Aug; 20(8): e3001736.
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2022Selection for infectivity profiles in slow and fast epidemics, and the rise of SARS-CoV-2 variants., Elife 2022 May; 11(): .
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2022An ensemble model based on early predictors to forecast COVID-19 health care demand in France., Proc Natl Acad Sci U S A 2022 May; 119(18): e2103302119.
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2022Global spatial dynamics and vaccine-induced fitness changes of Bordetella pertussis., Sci Transl Med 2022 Apr; 14(642): eabn3253.
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2022Reconstructing antibody dynamics to estimate the risk of influenza virus infection., Nat Commun 2022 Mar; 13(1): 1557.
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2022Impact of SARS-CoV-2 Delta variant on incubation, transmission settings and vaccine effectiveness: Results from a nationwide case-control study in France., Lancet Reg Health Eur 2022 Feb; 13(): 100278.
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2022Early chains of transmission of COVID-19 in France, January to March 2020., Euro Surveill 2022 02; 27(6): .
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