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  • MD-PhD Student
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  • Veterinary
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  • Director of Center
  • Director of Department
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About

I joined the Hub Team @ Pasteur C3BI as a Senior Bioinformatician  in November of 2015, where I am mainly focused on functional and pathway analysis at the genomic level. The goal of grouping genes (proteins, or  other biological molecules) into the pathways they are involved in is to  decrease the complexity of the system and thus increase our comprehension of it. I’m also interested in the integrative analysis of different omics data, both at large-scale and for small datasets, and love collaborating in interdisciplinary environments and having feedback from my fellow experimental colleagues.

Before joining the Hub,   I was a postdoctoral fellow in the Bioinformactics Core Facility from the Swiss Institute of Bioinformatics in Lausanne.  I received a Ph. D in Computational Biology from the School of Bioengineering of Rice University (Houston, TX, US), where I specialized in computational structural biology and functional genomics. As part of my PhD,  I was a visiting scholar in two labs in Madrid:  the Structural Computational Biology Group at the Spanish National Cancer Research Centre (CNIO), and the Computational Systems Biology Group at the Spanish National Centre for Biotechnology (CNB-CSIC ). There, I focused in  sequence analysis and  functional-structural relationships of proteins.

Engineer by training, I have a M. Sc. in Modeling and Simulation of Complex Realities from the International Center for Theoretical Physics, ICTP and the International School of Advanced Studies, SISSA (Triest, Italy).

 

Courses

Bioinformatics program for PhD students 2023 2024

This training program in statistics, bioinformatics and image analysis, financed by INCEPTION program, begins with a mandatory common core during which we will present all the tracks, and follow short courses on computer science, […]

2023-10-23 09:30:00 2024-06-28 17:00:00 Europe/Paris Bioinformatics program for PhD students 2023 2024 This training program in statistics, bioinformatics and image analysis, financed by INCEPTION program, begins with a mandatory common core during which we will present all the tracks, and follow short courses on computer science, […] 25-28 Rue du Docteur Roux, Paris, France Add to Calendar

Bioinformatics program for PhD students 2022-2023

This training program in statistics, bioinformatics and image analysis begins with a mandatory common core during which we will present all the tracks, and follow short courses on computer science, reproducible research, experimental design […]

2022-10-21 09:30:00 2023-06-30 18:00:00 Europe/Paris Bioinformatics program for PhD students 2022-2023 This training program in statistics, bioinformatics and image analysis begins with a mandatory common core during which we will present all the tracks, and follow short courses on computer science, reproducible research, experimental design […] 25-28 Rue du Docteur Roux, Paris, France Add to Calendar

Bioinformatics program for PhD students 2020-2021

This mandatory training program, required for all Institut Pasteur PhD students, begins with a group of common core courses including a knowledge base in reproducible research, R Programming and Statistics. Each student then can […]

2020-10-15 09:30:00 2021-06-03 17:00:00 Europe/Paris Bioinformatics program for PhD students 2020-2021 This mandatory training program, required for all Institut Pasteur PhD students, begins with a group of common core courses including a knowledge base in reproducible research, R Programming and Statistics. Each student then can […] 25-28 Rue du Dr Roux, 75015 Paris, France Add to Calendar

High Throughput Sequencing Data Analysis on Genomics, Metagenomics and Transcriptomics

The National Center for Aquaculture and Marine Research (CENAIM) of the Polytechnic School of the Litoral (Ecuador), the Computational Biology and Microbial Ecology Group (BCEM) of the Universidad de los Andes (Colombia) and the […]

2018-09-13 09:00:00 2018-09-21 17:00:00 Europe/Paris High Throughput Sequencing Data Analysis on Genomics, Metagenomics and Transcriptomics The National Center for Aquaculture and Marine Research (CENAIM) of the Polytechnic School of the Litoral (Ecuador), the Computational Biology and Microbial Ecology Group (BCEM) of the Universidad de los Andes (Colombia) and the […] Escuela superior politécnica del litoral, Guayaquil, Ecuador Add to Calendar

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CV

Senior Bioinformatician

November 2015– Present. Institut Pasteur, Paris

PostDoc fellow

October 2013 – October 2015. Swiss Institute of Bioinformatics. Bioinformatics Core Facility (BCF). Lausanne, Switzerland.

Phd fellow

September 2006 – December 2012. School of Bioengineering. Rice University. Computational Biology.

Visiting Scholar

January 2011 – May 2013. National Centre for Biotechnology (CNB-CSIC). Computational Systems Biology Group. Universidad Autónoma, Madrid, Spain.

Visiting Scholar

September 2009 – December 2010. Spanish National Cancer Centre. Structural Biology and Biocomputing Programme, Madrid, Spain.

Magister of Science

September 2001 – September 2003. Modeling and Simulation of Complex Realities. Joint Programme of the International Center for Theoretical Physics, ICTP and the International School of Advanced Studies, SISSA in Triest, Italy.

Publications

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