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About

After a PhD  in informatics on graph analysis (metabolic networks and sRNA-mRNA interaction graphs) at the LaBRI (Université de Bordeaux), I joined the DSIMB team (INTS) for a post-doc on structural modeling. Then, I performed a second post-doc at Metagenopolis – INRA Jouy-en-Josas, where I was initiated to the analysis of metagenomic data. I was recruited at the HUB in 2015, and since I pursue the development of methods dedicated to the treatment of metagenomic data by combining either the treatment of sequencing data, the statistics, the protein structural modeling and the graph analysis.

CV

Professional experience :

September 2015 to present Research engineer in the HUB of bioinformatics and biostatistics, Institut Pasteur
2013-2015 Postdoctoral researcher at Metagenopolis, INRA Jouy-en-Josas.
Supervisors : Nicolas Pons, S. Dusko Ehrlich
Developpement of pipeline dedicated to the assembly, annotation and differential analysis of metagenomic data. Involved in EVOTAR project (http://www.evotar.eu/), DAV132-CL1002 clinical study of DaVolterra company (http://www.davolterra.com/) and Danone research program.
2012-2013 Postdoctoral researcher INSERM UMR 665, INTS Paris, University of Paris Diderot.
Supervisors : Alexandre G. de Brevern, Nathalie Caulet
Subject:Structural modeling of laccase proteins
March – April 2010 Scientific consultant at the Institut Dermatologique d’Aquitaine (IDEA)
Supervisor : Frédéric Nunzi (Directeur du département In Vitro chez IDEA )
Subject : Statistical analysis of phototoxicity of cosmetic compounds.

Formation :

2012 Ph.D of Bioinformatics – Laboratoire Bordelais de Recherche en Informatique (LaBRI) – University of Bordeaux 1 and Centre de Bioinformatique de Bordeaux (CBiB) (France). Subject : Methodological development for the analysis of metabolic networks and non coding RNA Supervisors : Maylis Delest, Patricia Thébault, Isabelle Dutour
2009 Master of Bioinformatics – University of Paris Diderot (France).
2007 Licence of Bioinformatics University of Paris Diderot (France).
2006 DUT (two-year university degree in technology) in biology University of Paris XII (France).

 

Publications