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  • team
  • department
  • center
  • program_project
  • nrc
  • whocc
  • project
  • software
  • tool
  • patent
  • Administrative Staff
  • Assistant Professor
  • Associate Professor
  • Clinical Research Assistant
  • Clinician Researcher
  • Department Manager
  • Full Professor
  • Graduate Student
  • Honorary Professor
  • Lab assistant
  • Non-permanent Researcher
  • Permanent Researcher
  • Pharmacist
  • PhD Student
  • Physician
  • Post-doc
  • Prize
  • Project Manager
  • Research Associate
  • Research Engineer
  • Retired scientist
  • Technician
  • Undergraduate Student
  • Veterinary
  • Visiting Scientist
  • Deputy Director of Center
  • Deputy Director of Department
  • Deputy Director of National Reference Center
  • Deputy Head of Facility
  • Director of Center
  • Director of Department
  • Director of Institute
  • Director of National Reference Center
  • Group Leader
  • Head of Facility
  • Head of Operations
  • Head of Structure
  • Honorary President of the Departement
  • Labex Coordinator
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About

I joined the Hub Team @ Pasteur as a Bioinformatician in February 2021

Courses

09:00
16
Mar 2022
Course

PHINDaccess – Comparative Genomics

Comparative genomics is a field of biological research in which a variety of tools are used to compare genome sequences of different species. By carefully comparing characteristics that define various organisms, researchers can pinpoint […]
Bioinformatics and Biostatistics HUB
Institut Pasteur de Tunis
Computational Biology
Najwa Taib
Pierre Garcia
Véronique Hourdel
Hélène Lopez-Maestre
Claudia Chica
Natalia Pietrosemoli
Fatma Z. Guerfali
2022-03-16 09:00:00 2022-03-18 17:00:00 Europe/Paris PHINDaccess – Comparative Genomics Comparative genomics is a field of biological research in which a variety of tools are used to compare genome sequences of different species. By carefully comparing characteristics that define various organisms, researchers can pinpoint […]
09:30
21
Oct 2022
Course

Bioinformatics program for PhD students 2022-2023

This training program in statistics, bioinformatics and image analysis begins with a mandatory common core during which we will present all the tracks, and follow short courses on computer science, reproducible research, experimental design […]
Bioinformatics and Biostatistics HUB
Image Analysis Hub
INCEPTION – Institut Convergence for the study of Emergence of Pathology Through Individuals and Populations
Research and Resource Centre for Scientific Informatics
Emmanuelle Permal
Emeline Perthame
Jean-Yves Tinevez
Blaise Li
Sébastien MELLA
Anđela Davidović
Pascal Campagne
Thomas Obadia
Elise Jacquemet
Violaine Saint-André
Hanna Julienne
Thomas Bigot
Frédéric Lemoine
Nicolas Maillet
Matthew Albert
Claudia Chica
Stéphane Dallongeville
Julien Guglielmini
Vincent Guillemot
Bernd Jagla
Vincent Laville
Benoît Lelandais
Gaëlle Letort
Yann Loe-Mie
Hélène Lopez-Maestre
Marion Louveaux
Olivier Mirabeau
Damien Mornico
Adrien Pain
Natalia Pietrosemoli
Stéphane Rigaud
Hugo Varet
Amaury Vaysse
2022-10-21 09:30:00 2023-06-30 18:00:00 Europe/Paris Bioinformatics program for PhD students 2022-2023 This training program in statistics, bioinformatics and image analysis begins with a mandatory common core during which we will present all the tracks, and follow short courses on computer science, reproducible research, experimental design […]

CV

Experiences

  • 2021
    Research engineer
    Pasteur (HUB)
  • 2019
    Bioinformatician engineer : Bulk and single cell RNAseq data analyses
    Panther (U 1234) & Litis, Université de Rouen, France
  • 2018
    Data Scientist – Bioinformatician : Automatic data extraction from scientific papers
    omicX, Rouen, France
  • 2017
    Bioinformatician : Transcriptomic profiling of immune cells in tumor environment
    CRCL – Centre Léon Bérard, Lyon France, France

    • Education

    • 2017
      2013 – 2017 PhD in Bioinformatics : Analyses and method developmment for sequencing data
      Teams : Baobab – Transposable Elements, Laboratoire de Biométrie et Biologie Evolutive (LBBE), Université de Lyon 1, France
      Advisors: Vincent Lacroix & Christina Vieira. https://www.theses.fr/2017LYSE1025
    • 2013
      2010 – 2013 M.Sc. in Bioinformatics and Modelling
      Engineering school, INSA Lyon, France
    • 2010
      2008 – 2010 Preparatory Level in an international class (Eurinsa)
      Engineering school, INSA Lyon, France