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© Automated cell tracking in a Parhyale hawaiensis embryo. Wolff et al., 2018.
Member: Research Engineer

Stéphane Rigaud

• Image Analysis Hub

About

Stephane’s background is mainly oriented on mathematics and computer science applied to image analysis.

He obtained Master degree in 2010 from the computer science department of Universite Pierre et Marie Curie (Paris, France), where he studied Signal Processing, Image analysis, Computer Vision, Machine Learning, applied to biomedical topics.

He defended his doctorate in 2014, conducted in the Image and Pervasive Access Lab (CNRS) based in Singapore, in collaboration with the Institute of Medical Biology (A*STAR, Singapore), on the study of neural stem cell development and their proliferation into colonies in-vitro.

He then join the Bellaiche Lab at Institut Curie (Paris, France), investigating cell polarity and division, and morphogenesis and tissue mechanics. Focussing on tissue segmentation and tracking, and tissue deformation analysis and quantification. And extended his work to 3-dimensions analysis at Laboratoire Matiere et Systemes Complexes at Universite Paris Diderot (Paris, France) under the direction of Francois Graner.

In April 2019 he joined the Image Analysis Hub in Pasteur as a Research Engineer, where his main mission is to work in collaboration with biologist on bioimage analysis and quantification.

Courses

Image Processing for Electron Microscopy – Tomography

The 3rd one-week practical course on Image Processing for Electron Microscopy focused on (Cryo-)Tomography (IPEMtomo) will be held at Institut Pasteur, Paris, November 6-10, 2023. Electron tomography combined with image processing is one of […]

2023-11-06 00:00:00 2023-11-10 16:00:00 Europe/Paris Image Processing for Electron Microscopy – Tomography The 3rd one-week practical course on Image Processing for Electron Microscopy focused on (Cryo-)Tomography (IPEMtomo) will be held at Institut Pasteur, Paris, November 6-10, 2023. Electron tomography combined with image processing is one of […] 28 Rue du Dr Roux, Paris, France

Bioinformatics program for PhD students 2023 2024

This training program in statistics, bioinformatics and image analysis, financed by INCEPTION program, begins with a mandatory common core during which we will present all the tracks, and follow short courses on computer science, […]

2023-10-23 09:30:00 2024-06-28 17:00:00 Europe/Paris Bioinformatics program for PhD students 2023 2024 This training program in statistics, bioinformatics and image analysis, financed by INCEPTION program, begins with a mandatory common core during which we will present all the tracks, and follow short courses on computer science, […] 25-28 Rue du Docteur Roux, Paris, France

Image Processing for Electron Microscopy – CryoTomography

The 2nd one-week practical course on Image Processing for Electron Microscopy focused on Cryo-Tomography (IPEMcryotomo) will be held at Institut Pasteur, Paris, October 3-7, 2022. Electron tomography combined with image processing is one of […]

2022-10-03 10:00:00 2022-10-07 17:00:00 Europe/Paris Image Processing for Electron Microscopy – CryoTomography The 2nd one-week practical course on Image Processing for Electron Microscopy focused on Cryo-Tomography (IPEMcryotomo) will be held at Institut Pasteur, Paris, October 3-7, 2022. Electron tomography combined with image processing is one of […] 25 Rue du Dr Roux, Paris, France

Publications

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