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About

The Biomics Core Facility is the C2RT structure at Institut Pasteur for Next Generation Sequencing and includes both short and long-read technologies (As such we follow the common guidelines and good practices). Our mission is to facilitate scientific discovery within Pasteur Institute’s network and academic research institutes. Biomics accepts both service and collaborative projects and works closely with the C3BI and DSI to provide data analysis solutions and data storage for researchers. Please contact us for pricing and turnaround times. Our website, https://biomics.pasteur.fr, allows you to:

  • Ask questions (price, delay time, grants…)
  • Submit a new project
  • Monitor the progress of your project
  • Information on the services provided

Here are some examples of what we propose (Procaryotes, Eukaryotes and Viruses):

  1. Technology: Short-Reads (Illumina), Long-Reads (PacBio & Nanopore)
  2. DNA-Seq: Sequencing de novo and targeted
  3. RNA-Seq: Transcriptomic Analysis
  4. Metagenomic: Targeted sequencing studies (16S, 18S, ITS) or random (Shotgun)
  5. Genotyping (autonomous access)
  6. Bioinformatics: NGS data analysis (RNA-Seq, Variant, Assembly, others…)

Biomics and its staff of experts work hard for the successful and timely processing of all samples and requests. If you are unsatisfied with our service or have a suggestion on how we can improve please do not hesitate to contact us: Reclamation / Suggestions  

Equipments

Booking site

NextSeq2000 • Illumina • (Autonomous)

Description The NextSeq 2000 is a medium throughput NGS sequencer using the same types of libraries as other Illumina sequencers. Its multiple cassettes make it very flexible (virus -> human). Usage For autonomous use […]

Qubit • Invitrogen • (Autonomous)

 Description Qubit doses nucleic acids in a sensitive and specific way: accurately measures the concentration of nucleic acids, whether they are double-stranded DNA, single-stranded DNA, total RNA or microRNA, even in the presence of […]

COVARIS • E220 • (Autonomous)

Description Covaris is recognized as the reference for DNA fragmentation. Adaptive Focused Acoustics technology (AFA™) allows precise control of the mechanical fragmentation of DNA. In addition, this process is isothermal, so it does not […]

MiniSeq • Illumina • (Autonomous)

MiniSeq            NGS low throughput     Description The MiniSeq is a low throughput NGS sequencer using the same types of libraries as other Illumina sequencers. Its multiple cassettes make it flexible. Usage For autonomous […]

iseq100

iSeq100 • Illumina • (Autonomous)

ISeq 100            Description The ISeq 100 is a low output NGS sequencer using the same types of libraries as the other Illumina sequencers. It is particularly suitable for WGS […]

NextSeq500 • Illumina • (Autonomous)

  Description The NextSeq 500 is a medium throughput NGS sequencer using the same types of libraries as other Illumina sequencers. Its multiple cassettes make it very flexible (virus -human). Usage For autonomous use […]

Bioanalyzer 2100 • Agilent • (Autonomous)

  Bioanalyzer (Analyse des acides nucléiques) Description The Bioanalyzer 2100 is dedicated to miniaturized electrophoresis in a network of microcapillary channels. DNA, RNA and even proteins can be analyzed on single-use chips called “Lab-On-a-Chips”. […]

Software

Courses

Scientific Programming in Python

The ever growing usage of high throughput technologies in Biology is revolutionizing the life sciences and profoundly changing its practices. Scripting languages are used on a daily basis in life science labs in order […]

2017-03-06 09:30:00 2017-03-18 17:00:00 Europe/Paris Scientific Programming in Python The ever growing usage of high throughput technologies in Biology is revolutionizing the life sciences and profoundly changing its practices. Scripting languages are used on a daily basis in life science labs in order […] 25 Rue du Dr Roux, 75015 Paris, France

A new SPOC

A new SPOC (Small Private Online Course) “Training for the use of a Bioanalyzer chip: Preparation of a RNA Nano chip” is now offered to Pasteurs Users and Orex. More informations here. See you […]

2017-10-19 00:00:00 2017-10-19 00:00:00 Europe/Paris A new SPOC A new SPOC (Small Private Online Course) “Training for the use of a Bioanalyzer chip: Preparation of a RNA Nano chip” is now offered to Pasteurs Users and Orex. More informations here. See you […] 28 Rue du Docteur Roux, Paris, France

Workshop: Bacterial RNAseq

We propose a skills training for PhD students on Bacterial RNAseq experiments Using total RNAs, we will i) enrich the mRNAs by depleting the rRNAs ; ii) prepare and sequence cDNA library and iii) analyse […]

2016-06-06 09:00:00 2016-06-10 17:00:00 Europe/Paris Workshop: Bacterial RNAseq We propose a skills training for PhD students on Bacterial RNAseq experiments Using total RNAs, we will i) enrich the mRNAs by depleting the rRNAs ; ii) prepare and sequence cDNA library and iii) analyse […] 28 Rue du Docteur Roux, Paris, France

Training: analysis of the transcriptome by RNAseq

The Transcriptome and Epigenome platform of the Biomics pole is organizing a one week (October 10, 2016 – October 14, 2016) training session dedicated to the analysis of the transcriptome by RNAseq. It  is […]

2016-10-10 09:00:00 2016-10-14 17:00:00 Europe/Paris Training: analysis of the transcriptome by RNAseq The Transcriptome and Epigenome platform of the Biomics pole is organizing a one week (October 10, 2016 – October 14, 2016) training session dedicated to the analysis of the transcriptome by RNAseq. It  is […] 28 Rue du Docteur Roux, Paris, France

Projects

Transversal Project

Tools

Fundings

Publications

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