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  • Visiting Scientist
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  • Deputy Director of Department
  • Deputy Director of National Reference Center
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  • Director of Center
  • Director of Department
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About

As a computational biologist I have been involved in various projects seeking to answer different biological questions. Those projects have allowed me to define my main research interest, namely the study of the emergence, storage and modulation of information in biological systems assisted by computational methods.
During my research career I have acquired extensive experience in the analysis of sequence data at the DNA and protein level. I’m trained both in HTS bioinformatic protocols (ChIP-seq, ATAC-seq, RNA-seq, genome assembly) and fine detail sequence analysis. Most importantly, I have gained proficiency in the use of the statistical models that are at the basis of the quantitative analysis of low and high throughput sequence data and of the integration of multidimensional OMIC datasets. Additionally, my experience as a lecturer and instructor has taught me that training researchers about the formal basis of bioinformatic methodologies is the key for a successful collaboration between wet and dry lab. Likewise, by working within few international consortia I have acquire the ability to collaborate with multidisciplinary groups and to coordinate younger researchers.

Courses

Bioinformatics program for PhD students 2023 2024

This training program in statistics, bioinformatics and image analysis, financed by INCEPTION program, begins with a mandatory common core during which we will present all the tracks, and follow short courses on computer science, […]

2023-10-23 09:30:00 2024-06-28 17:00:00 Europe/Paris Bioinformatics program for PhD students 2023 2024 This training program in statistics, bioinformatics and image analysis, financed by INCEPTION program, begins with a mandatory common core during which we will present all the tracks, and follow short courses on computer science, […] 25-28 Rue du Docteur Roux, Paris, France

PHINDaccess – Functional OMICs

This course will explore state-of-the-art knowledge and experiences to better understand complex biological systems. The main objective is to provide participants with a solid foundation on the current bioinformatics approaches and tools to better […]

2022-05-23 09:00:00 2022-05-27 17:00:00 Europe/Paris PHINDaccess – Functional OMICs This course will explore state-of-the-art knowledge and experiences to better understand complex biological systems. The main objective is to provide participants with a solid foundation on the current bioinformatics approaches and tools to better […] Institut Pasteur، Tunis, Tunisia

High Throughput Sequencing Data Analysis on Genomics, Metagenomics and Transcriptomics

The National Center for Aquaculture and Marine Research (CENAIM) of the Polytechnic School of the Litoral (Ecuador), the Computational Biology and Microbial Ecology Group (BCEM) of the Universidad de los Andes (Colombia) and the […]

2018-09-13 09:00:00 2018-09-21 17:00:00 Europe/Paris High Throughput Sequencing Data Analysis on Genomics, Metagenomics and Transcriptomics The National Center for Aquaculture and Marine Research (CENAIM) of the Polytechnic School of the Litoral (Ecuador), the Computational Biology and Microbial Ecology Group (BCEM) of the Universidad de los Andes (Colombia) and the […] Escuela superior politécnica del litoral, Guayaquil, Ecuador

Morning session – Introduction to NGS data analysis

The Hub of Bioinformatics and Biostatistics at the Institut Pasteur organizes thematic courses open to everybody. The second session, entitled “Introduction to NGS data analysis” will take place every Tuesday, from the May 10th […]

2016-05-10 09:00:00 2016-06-28 12:00:00 Europe/Paris Morning session – Introduction to NGS data analysis The Hub of Bioinformatics and Biostatistics at the Institut Pasteur organizes thematic courses open to everybody. The second session, entitled “Introduction to NGS data analysis” will take place every Tuesday, from the May 10th […] 28 Rue du Dr Roux, Paris, France

Hands-on course on High Throughput Sequencing data analysis: Genomics, Transcriptomics, Epigenomics

The University of Los Andes and the Hub of Bioinformatics and Biostatistics of the C3BI (Center of Bioinformatics Biostatistics and Integrative Biology) at Institut Pasteur will organize this Hands-on course aimed at students/researchers that […]

2017-11-27 09:00:00 2017-12-01 17:00:00 Europe/Paris Hands-on course on High Throughput Sequencing data analysis: Genomics, Transcriptomics, Epigenomics The University of Los Andes and the Hub of Bioinformatics and Biostatistics of the C3BI (Center of Bioinformatics Biostatistics and Integrative Biology) at Institut Pasteur will organize this Hands-on course aimed at students/researchers that […] Bogota - Bogotá, Colombie

Tools

CV

Professional experience

Oct. 2015 – now
Senior Bioinformatician
Hub Bioinformatics and Biostatistics – DBC Paris – France
July 2014 – May 2015
Assistant Professor
Universidad de los Andes Bogotá – Colombia
August 2012 – June 2014
Postdoctoral position
Institut de Biologie de l’Ecole Normale Superieure Paris – France
March 2010 – July 2012
Postdoctoral position
Commissariat à l’énergie atomique Evry – France

Education

Oct. 2005 – May 2009
PhD in Computational Biology
European Molecular Biology Laboratory Heidelberg – Germany
Oct. 2003 – Jan. 2005
Masters  in Scientific Calculation
“Sapienza” Università di Roma Roma – Italia
1997 – 2002
B.Sc. Biology
Universidad Nacional de Colombia Bogotà – Colombia

 

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