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About

As a computational biologist I have been involved in various projects seeking to answer different biological questions. Those projects have allowed me to define my main research interest, namely the study of the emergence, storage and modulation of information in biological systems assisted by computational methods.

During my research career I have acquired extensive experience in the analysis of sequence data at the DNA and protein level. I’m trained both in HTS bioinformatic protocols (ChIP-seq, ATAC-seq, RNA-seq, genome assembly) and fine detail sequence analysis. Most importantly, I have gained proficiency in the use of the statistical models that are at the basis of the quantitative analysis of low and high throughput sequence data and of the integration of multidimensional OMIC datasets.

Additionally, my experience as a lecturer and instructor has taught me that training researchers about the formal basis of bioinformatic methodologies is the key for a successful collaboration between wet and dry lab. Likewise, by working within few international consortia I have acquire the ability to collaborate with multidisciplinary groups and to coordinate younger researchers.

Courses

Bioinformatics program for PhD students

This 50-hour training program required for all Institut Pasteur PhD students begins with a group of common core courses including a knowledge base in reproducible research, R Programming and Statistics. Each student then chooses […]

2019-11-12 09:00:00 2019-11-12 16:30:00 Europe/Paris Bioinformatics program for PhD students This 50-hour training program required for all Institut Pasteur PhD students begins with a group of common core courses including a knowledge base in reproducible research, R Programming and Statistics. Each student then chooses […] 25-28 Rue du Dr Roux, 75015 Paris, France

High Throughput Sequencing Data Analysis on Genomics, Metagenomics and Transcriptomics

The National Center for Aquaculture and Marine Research (CENAIM) of the Polytechnic School of the Litoral (Ecuador), the Computational Biology and Microbial Ecology Group (BCEM) of the Universidad de los Andes (Colombia) and the […]

2018-09-13 09:00:00 2018-09-21 17:00:00 Europe/Paris High Throughput Sequencing Data Analysis on Genomics, Metagenomics and Transcriptomics The National Center for Aquaculture and Marine Research (CENAIM) of the Polytechnic School of the Litoral (Ecuador), the Computational Biology and Microbial Ecology Group (BCEM) of the Universidad de los Andes (Colombia) and the […] Escuela superior politécnica del litoral, Guayaquil, Ecuador

Morning session – Introduction to NGS data analysis

The Hub of Bioinformatics and Biostatistics at the Institut Pasteur organizes thematic courses open to everybody. The second session, entitled “Introduction to NGS data analysis” will take place every Tuesday, from the May 10th […]

2016-05-10 09:00:00 2016-06-28 12:00:00 Europe/Paris Morning session – Introduction to NGS data analysis The Hub of Bioinformatics and Biostatistics at the Institut Pasteur organizes thematic courses open to everybody. The second session, entitled “Introduction to NGS data analysis” will take place every Tuesday, from the May 10th […] 28 Rue du Dr Roux, Paris, France

Introduction to Data Analysis

This four-week graduate level course will give participants basic skills and hands-on training in statistics and descriptive data analysis. This course is (primarily) dedicated to first year PhD students of the Institut Pasteur (each […]

2018-10-22 09:00:00 2018-11-20 00:00:00 Europe/Paris Introduction to Data Analysis This four-week graduate level course will give participants basic skills and hands-on training in statistics and descriptive data analysis. This course is (primarily) dedicated to first year PhD students of the Institut Pasteur (each […] 28 Rue du Dr Roux, Paris, France

Hands-on course on High Throughput Sequencing data analysis: Genomics, Transcriptomics, Epigenomics

The University of Los Andes and the Hub of Bioinformatics and Biostatistics of the C3BI (Center of Bioinformatics Biostatistics and Integrative Biology) at Institut Pasteur will organize this Hands-on course aimed at students/researchers that […]

2017-11-27 09:00:00 2017-12-01 17:00:00 Europe/Paris Hands-on course on High Throughput Sequencing data analysis: Genomics, Transcriptomics, Epigenomics The University of Los Andes and the Hub of Bioinformatics and Biostatistics of the C3BI (Center of Bioinformatics Biostatistics and Integrative Biology) at Institut Pasteur will organize this Hands-on course aimed at students/researchers that […] Bogota - Bogotá, Colombie

CV

Professional experience

Oct. 2015 – now
Senior Bioinformatician
Hub Bioinformatics and Biostatistics – C3BI Paris – France
July 2014 – May 2015
Assistant Professor
Universidad de los Andes Bogotá – Colombia
August 2012 – June 2014
Postdoctoral position
Institut de Biologie de l’Ecole Normale Superieure Paris – France
March 2010 – July 2012
Postdoctoral position
Commissariat à l’énergie atomique Evry – France

Education

Oct. 2005 – May 2009
PhD in Computational Biology
European Molecular Biology Laboratory Heidelberg – Germany
Oct. 2003 – Jan. 2005
Masters  in Scientific Calculation
“Sapienza” Università di Roma Roma – Italia
1997 – 2002
B.Sc. Biology
Universidad Nacional de Colombia Bogotà – Colombia

 

Publications

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