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© Jacob SEELER & Anne DEJEAN, Institut Pasteur
Immunostaining of PML nuclear bodies involved in acute promyelocytic leukemia

About

As a computational biologist I have been involved in various projects seeking to answer different biological questions. Those projects have allowed me to define my main research interest, namely the evolutionary study of the emergence, storage and modulation of information in biological systems assisted by computational methods.

During my research career I have acquired extensive experience in the analysis of sequence data at the DNA and protein level. I’m trained both in NGS bioinformatic protocols (ChIP-seq, ATAC-seq, RNA-seq, genome assembly) and fine detail sequence analysis. Most importantly, I have gained proficiency in the use of the statistical models that are at the basis of the quantitative analysis of low and high throughput sequence data.

Additionally, my experience as a lecturer and instructor has taught me that training researchers about the formal basis of bioinformatic methodologies is the key for a successful collaboration between wet and dry lab. Likewise, I have gained valuable skills by working within two international consortia (TARA Oceans project and TRANSNET): the ability to collaborate with multidisciplinary groups and to coordinate younger researchers.

Events

Ecole thématique – Bioinformatics of protein­-protein interactions for wet lab scientists

Building: Lwoff – Room: 14-15 – Address: 25 Rue du Docteur Roux, Paris, France
2017-04-03 09:00:00 2017-04-07 18:00:00 Europe/London Ecole thématique – Bioinformatics of protein­-protein interactions for wet lab scientists The course is intended for PhD students and postdocs working in experimental biology, but scientist of all levels are welcome. Participants will be introduced to a wide variety of popular bioinformatic tools aimed at […] 25 Rue du Docteur Roux, Paris, France

CV

Professional experience

Oct. 2015 – now Senior Bioinformatician

Hub Bioinformtaics and Biostatistics – C3BI

Paris – France

July 2014 – May 2015

Assistant Professor

Universidad de los Andes

Bogotá – Colombia

August 2012 – June 2014

Postdoctoral position

Institut de Biologie de l’Ecole Normale Superieure

Paris – France

March 2010 – July 2012

Postdoctoral position

Commissariat à l’énergie atomique

Evry – France

     

 

Education

Oct. 2005 – May 2009

PhD in Computational Biology

European Molecular Biology Laboratory

Heidelberg – Germany

Oct. 2003 – Jan. 2005

Masters  in Scientific Calculation

“Sapienza” Università di Roma

Roma – Italia

1997 – 2002

B.Sc. Biology

Universidad Nacional de Colombia

Bogotà – Colombia

Publications