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© Matteo Bonazzi, Edith Gouin
Observation en immunofluorescence d'une cellule infectée par Listeria monocytogenes. En bleu: marquage des protéines de surface de Listeria qui permet de visualiser les bactéries. En rouge et vert: marquage de l'actine, une protéine qui forme le cytosquelette des cellules. Les Listeria utilisent l'actine cellulaire pour former des "comêtes" et se déplacer à l'intérieur des cellules qu'elles infectent. Cell infected by Listeria monocytogenes. The surface proteins (in blue) of Listeria enable us to view the bacteria. Actin, a constituent protein of cells, is shown in red and green.

About

After being Associate Professor in Genetics at Paris VI for 13 years, I joined the Bioinformatics and Biostatistics HUB at Institut Pasteur in september 2016. I “dropped the pipette” at that time to dedicate my expertise on data analysis to the Pasteur scientists. I have led the statistics pole of the Hub for two years and the Genomics pole for six years. I am now more focusing on collaborations with Pasteur scientists, notably Pierre Bruhns. My backbone field of knowledge is Biology and experimentation, with advanced knowledge in statistics and computing (R, bash, nextflow, docker, apptainer, git, python). Notably, I have helped Pasteur scientists with experimental design and statistical analysis of experimental results, from simple experiments to Antibody repertoires, SNParray, human NGS, Ecoli NGS, among others. I have also written a book in statistics and R computing.

Please, see my keywords above, as well as my github page, gitlab page, CV and list of publications.

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CV

Professional experiences
2016 – presentResearch Engineer, Institut Pasteur
2005 – 2016Associate Professor (Maître de Conférences), UPMC & Institut Curie
2003 – 2004Associate Professor, UPMC & Institut Jacques Monod
2001 – 2003Assistant Professor (ATER), UPMC & Institut Jacques Monod

Education
2013Research Leader grade (HDR), Université Pierre et Marie Curie (UPMC, Paris VI)
2001PhD in Human Genetics, Université Paris VII & Institut Gustave Roussy
1995DEA Genetic ressources and plant improvement, Université Paris XI
1994Magistère de Génétique, Université Paris VII

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