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  • team
  • department
  • center
  • program_project
  • nrc
  • whocc
  • project
  • software
  • tool
  • patent
  • Administrative Staff
  • Assistant Professor
  • Associate Professor
  • Clinical Research Assistant
  • Clinical Research Nurse
  • Clinician Researcher
  • Department Manager
  • Dual-education Student
  • Full Professor
  • Honorary Professor
  • Lab assistant
  • Master Student
  • MD-PhD Student
  • Medical Staff
  • Non-permanent Researcher
  • Nursing Staff
  • Permanent Researcher
  • Pharmacist
  • PhD Student
  • Physician
  • Post-doc
  • Prize
  • Project Manager
  • Research Associate
  • Research Engineer
  • Retired scientist
  • Technician
  • Undergraduate Student
  • Veterinary
  • Visiting Scientist
  • Deputy Director of Center
  • Deputy Director of Department
  • Deputy Director of National Reference Center
  • Deputy Head of Facility
  • Director of Center
  • Director of Department
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About

As a computational biologist I have been involved in various projects seeking to answer different biological questions. Those projects have allowed me to define my main research interest, namely the study of the emergence, storage and modulation of information in biological systems assisted by computational methods.
During my research career I have acquired extensive experience in the analysis of sequence data at the DNA and protein level. I’m trained both in HTS bioinformatic protocols (ChIP-seq, ATAC-seq, RNA-seq, genome assembly) and fine detail sequence analysis. Most importantly, I have gained proficiency in the use of the statistical models that are at the basis of the quantitative analysis of low and high throughput sequence data and of the integration of multidimensional OMIC datasets. Additionally, my experience as a lecturer and instructor has taught me that training researchers about the formal basis of bioinformatic methodologies is the key for a successful collaboration between wet and dry lab. Likewise, by working within few international consortia I have acquire the ability to collaborate with multidisciplinary groups and to coordinate younger researchers.

Courses

Bioinformatics program for PhD students 2023 2024

This training program in statistics, bioinformatics and image analysis, financed by INCEPTION program, begins with a mandatory common core during which we will present all the tracks, and follow short courses on computer science, […]

2023-10-23 09:30:00 2024-06-28 17:00:00 Europe/Paris Bioinformatics program for PhD students 2023 2024 This training program in statistics, bioinformatics and image analysis, financed by INCEPTION program, begins with a mandatory common core during which we will present all the tracks, and follow short courses on computer science, […] 25-28 Rue du Docteur Roux, Paris, France Add to Calendar

Bioinformatics program for PhD students 2022-2023

This training program in statistics, bioinformatics and image analysis begins with a mandatory common core during which we will present all the tracks, and follow short courses on computer science, reproducible research, experimental design […]

2022-10-21 09:30:00 2023-06-30 18:00:00 Europe/Paris Bioinformatics program for PhD students 2022-2023 This training program in statistics, bioinformatics and image analysis begins with a mandatory common core during which we will present all the tracks, and follow short courses on computer science, reproducible research, experimental design […] 25-28 Rue du Docteur Roux, Paris, France Add to Calendar

Bioinformatics program for PhD students 2020-2021

This mandatory training program, required for all Institut Pasteur PhD students, begins with a group of common core courses including a knowledge base in reproducible research, R Programming and Statistics. Each student then can […]

2020-10-15 09:30:00 2021-06-03 17:00:00 Europe/Paris Bioinformatics program for PhD students 2020-2021 This mandatory training program, required for all Institut Pasteur PhD students, begins with a group of common core courses including a knowledge base in reproducible research, R Programming and Statistics. Each student then can […] 25-28 Rue du Dr Roux, 75015 Paris, France Add to Calendar

High Throughput Sequencing Data Analysis on Genomics, Metagenomics and Transcriptomics

The National Center for Aquaculture and Marine Research (CENAIM) of the Polytechnic School of the Litoral (Ecuador), the Computational Biology and Microbial Ecology Group (BCEM) of the Universidad de los Andes (Colombia) and the […]

2018-09-13 09:00:00 2018-09-21 17:00:00 Europe/Paris High Throughput Sequencing Data Analysis on Genomics, Metagenomics and Transcriptomics The National Center for Aquaculture and Marine Research (CENAIM) of the Polytechnic School of the Litoral (Ecuador), the Computational Biology and Microbial Ecology Group (BCEM) of the Universidad de los Andes (Colombia) and the […] Escuela superior politécnica del litoral, Guayaquil, Ecuador Add to Calendar

Hands-on course on High Throughput Sequencing data analysis: Genomics, Transcriptomics, Epigenomics

The University of Los Andes and the Hub of Bioinformatics and Biostatistics of the C3BI (Center of Bioinformatics Biostatistics and Integrative Biology) at Institut Pasteur will organize this Hands-on course aimed at students/researchers that […]

2017-11-27 09:00:00 2017-12-01 17:00:00 Europe/Paris Hands-on course on High Throughput Sequencing data analysis: Genomics, Transcriptomics, Epigenomics The University of Los Andes and the Hub of Bioinformatics and Biostatistics of the C3BI (Center of Bioinformatics Biostatistics and Integrative Biology) at Institut Pasteur will organize this Hands-on course aimed at students/researchers that […] Bogota - Bogotá, Colombie Add to Calendar

Tools

CV

Professional experience

Oct. 2015 – now
Senior Bioinformatician
Hub Bioinformatics and Biostatistics – DBC Paris – France
July 2014 – May 2015
Assistant Professor
Universidad de los Andes Bogotá – Colombia
August 2012 – June 2014
Postdoctoral position
Institut de Biologie de l’Ecole Normale Superieure Paris – France
March 2010 – July 2012
Postdoctoral position
Commissariat à l’énergie atomique Evry – France

Education

Oct. 2005 – May 2009
PhD in Computational Biology
European Molecular Biology Laboratory Heidelberg – Germany
Oct. 2003 – Jan. 2005
Masters  in Scientific Calculation
“Sapienza” Università di Roma Roma – Italia
1997 – 2002
B.Sc. Biology
Universidad Nacional de Colombia Bogotà – Colombia

 

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