Group
Metagenomics [21]
Research Engineer
Courtney Thomas
Evolutionary Biology of the Microbial Cell
Courtney obtained her Master in Marine Biology from the University of Georgia (USA). She joined the team as a Research Engineer to work on the evolution of the animal microbiome.
Administrative Staff
Angèle Bénard
I am originally an infectious disease scientist who has developed a genuine interest in bioinformatics. I believe that the use of big data and computational methods applied to biology will be a leverage point […]
Research Engineer
Hanna Julienne
Statistical Genetics
Project
SPARK: Transmission of multidrug resistant Klebsiella clones and genes – a One Health approach
Sylvain Brisse
Post-doc
Juan Sebastián López Fernández
Biodiversity and Epidemiology of Bacterial Pathogens
Currently I am working within the BEBP Unit at the Institut Pasteur, on the SPArk project where we are characterizing aspects of the transmission chain of Klebsiella spp. and adaptation to hosts that serve […]
Post-doc
Project Manager
Emilie Bonnaud
Lyssavirus Dynamics and Host Adaptation
PhD Student
Naeem Iqbal
Bacterial Genome Plasticity
Program Project
INCEPTION – Institut Convergence for the study of Emergence of Pathology Through Individuals and Populations
Inception Goal The Inception’s goal is to develop a core structure to mobilize data resources, numerical sciences, and fundamental experimental biology in a range of health issues. Inception program uses Integrative Biology, Social Science […]
Project
ANR-Arch-Evol: Phylogenomic approaches to investigate the origin and evolution of the Archaea
Simonetta Gribaldo • Céline Brochier-Armanet
PhD Student
Sara Vieira-Silva
Microbial Evolutionary Genomics
Sara did her PhD in GEM from 2007 to 2011 on the imprint of selection for rapid growth in bacterial genomes and in metagenomes. She is currently doing a postdoc with Jeroen Raes at […]
Post-doc
Jorge Moura de Sousa
Microbial Evolutionary Genomics
Post-doc
Sophie Abby
Microbial Evolutionary Genomics
Sophie Abby is currently a postdoctoral researcher at the University of Vienna where she works on Metagenomics. She was a PhD student at the LBBE in Lyon (with Vincent Daubin and Manolo Gouy) and […]
Software
SHAMAN: SHiny Application for Metagenomic ANalysis
Amine Ghozlane • Stevenn Volant
Research Engineer
Nicolas Maillet
Expertise group : ALPS – Algorithmics and programming in science
After a PhD in bioinformatics at Inria/IRISA, Université de Rennes 1, Rennes (France), under the supervision of Dominique Lavenier and Pierre Peterlongo, I did a postdoc in bioinformatics at Laboratory of Ecology and Evolution […]
Research Engineer
Amine Ghozlane
Biomics
After a PhD in informatics on graph analysis (metabolic networks and sRNA-mRNA interaction graphs) at the LaBRI (Université de Bordeaux), I joined the DSIMB team (INTS) for a post-doc on structural modeling. Then, I […]