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  • team
  • department
  • center
  • program_project
  • nrc
  • whocc
  • project
  • software
  • tool
  • patent
  • Administrative Staff
  • Assistant Professor
  • Associate Professor
  • Clinical Research Assistant
  • Clinician Researcher
  • Department Manager
  • Full Professor
  • Graduate Student
  • Honorary Professor
  • Lab assistant
  • Non-permanent Researcher
  • Permanent Researcher
  • Pharmacist
  • PhD Student
  • Physician
  • Post-doc
  • Prize
  • Project Manager
  • Research Associate
  • Research Engineer
  • Retired scientist
  • Technician
  • Undergraduate Student
  • Veterinary
  • Visiting Scientist
  • Deputy Director of Center
  • Deputy Director of Department
  • Deputy Director of National Reference Center
  • Deputy Head of Facility
  • Director of Center
  • Director of Department
  • Director of Institute
  • Director of National Reference Center
  • Group Leader
  • Head of Facility
  • Head of Operations
  • Head of Structure
  • Honorary President of the Departement
  • Labex Coordinator
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© Research
Scientific Fields
Diseases
Organisms
Applications
Technique
Starting Date
29
Jun 2015
Status
Ongoing
Members
2
Structures
1
Internal price: free
Internal assisted price: free

About

Every Tuesday mornings from 10am to 12am, Hub engineers are enlisted to provide a direct support to any members of Institut Pasteur seeking help on bioinformatics or biostatistics related subjects. You can come directly to Yersin Building (24), Ground Floor, or if you work remotely you can also come virtually using Teams .

Please note that open desks are suspended during the summer break, in August.
If you need urgent help from the Hub at that time, please ask a short question.

Hub engineers can provide support on :

  • Design of experiment (from the statistical point)
  • Analysis & integration of various types of data, including but not limited to :
    • OMICS data
    • epidemiological data
    • time series data
  • Statistics methods
  • Software development
  • Web tool development
  • Database development
  • Code review

Please use the following table to see available hub members for future sessions

Sessions Group Hub members
13-12-2022
28-03-2023
Group 1 Rachel Torchet – Web & software development, User experience
Stevenn Volant – Statistics, Metagenomics, Rshiny
Thomas Bigot – Phylogenetics, Software development & Algorithmics
Damien Mornico – Genomics, Paleogenomics
20-12-2022
04-04-2023
Group 2 Rémi Planel – Web development, database management
Vincent Guillemot – Statistics
Julien Gugluielmini – Phylogenetics, Genomics
Amaury Vaysse – Genomics, R
27-12-2022
11-04-2023
Group 3 Nicolas Maillet – Algorithmics, Software development, Metagenomics, Stringology
Thomas Obadia – Statistics, Epidemiology
Emmanuelle Permal – Genomics, Development, Transcriptomics
Alexis Criscuolo – Phylogenetics, Algorithmics, Genomics
03-01-2023
18-04-2023
Group 4 Simon Malesys – Web & software development, Data integration & management
Hugo Varet – Statistics, R, Metabolomics
Anna Zhukova – Phylogenetics, Software development, Network analysis
Rachel Legendre – Transcriptomics, Epigenomics
10-01-2023
25-04-2023
Group 5 Johann Dreo – Software development, Decision support systems, Network analysis
Hanna Julienne – Statistics, Development, Genomics
Frédéric Lemoine – Phylogenetics, Software development, Transcriptomics
Corinne Maufrais – Genomics, Data management
17-01-2023
02-05-2023
Group 6 Bryan Brancotte – Web development, Database management
Quentin Giai Gianetto – Statistics, Proteomics
Etienne Kornobis – Software development, Transcriptomics, Genomics
Hélène Lopez-Maestre – Genomics, transcriptomics, single cell
11-10-2022
24-01-2023
09-05-2023
Group 7 Blaise Li – Software development, Automation, Reproducibility, Python, command-line
Pascal Campagne – Statistics, Genomics, GWAS
Najwa Taib – Phylogenetics
Natalia Pietrosemoli – Systems bioinformatics, Transcriptomics, Proteomics, Metabolomics
18-10-2022
31-01-2023
16-05-2023
Group 8 Fabien Mareuil – Web development, Galaxy, Structural bioinformatics
Emeline Perthame – Statistics, transcriptomics, Proteomics
Adrien Pain – Genomics, Transcriptomics
Claudia Chica – Transcriptomics, Epigenomics, Single cell
25-10-2022
07-02-2023
23-05-2023
Group 9 Bertrand Néron – Algorithmics, Software development, Database management
Elise Jacquemet – Statistics, Transcriptomics
Stéphane Descorps-Declère – Algorithmics, Software development, Genomics
Evangelia Eleftheriou – Epigenomics, Transcriptomics
01-11-2022
14-02-2023
30-05-2023
Group 10 Thomas Cokelaer – Algorithmics, Genomics, Transcriptomics
Gaël Millot – Statistics, Genomics, Image analysis
Bernd Jagla – Single cell, Cytometry data analysis, Transcriptomics
Nicolas Traut – Neuroimaging, Genomics
08-11-2022
21-02-2023
06-06-2023
Group 11 Elodie Chapeaublanc – Web development, Genomics
Anđela Davidović – System biology, Mathematical modeling
Julia Kende – Phylogenetics, Software development & Algorithmics
Yann loe-Mie – Genomics, Transcriptomics, Epigenomics, Single cell
15-11-2022
28-02-2023
16-06-2023
Group 12 Pierre Lechat – Software development, Variant calling
François Laurent – Software development, Modelisation, Statistics
Olivier Mirabeau – Transcriptomics, Genomics, Statistics
Maguelonne Roux – Genomics
22-11-2022
07-03-2023
20-06-2023
Group 13 Yoann Dufresne – Algorithmic, Pipeline development, Genomics
Juliette Meyer – Statistics
Freddy Cliquet – Algorithmics, Statistics, System boilogy
Violaine Saint-André – Epigenomics, Transcriptomics
29-11-2022
14-03-2023
27-06-2023
Group 14 Amandine Perrin – Software development, Comparative genomics
Benoît Lelandais – Image analysis, Software development, Artificial Intelligence
Julien Fumey – Genomics, Phylogenetics
Sébastien Mella – Single Cell, Statistics
06-12-2022
21-03-2023
04-07-2023
Group 15 Dimitri Desvillechabrol – Software development
Vincent Laville – Statistics, Development, Genomics
Stephan Fischer – Single Cell, Genomics
Victoire Baillet – Genomics, Epigenomics

Access Protocol

  • Every Tuesday morning
  • From 10 to 12
  • Yersin Building (24), Ground Floor
  • On Teams using this link
  • Short term assistance, first contact