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  • department
  • center
  • program_project
  • nrc
  • whocc
  • project
  • software
  • tool
  • patent
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  • Assistant Professor
  • Associate Professor
  • Clinical Research Assistant
  • Department Manager
  • Full Professor
  • Graduate Student
  • Lab assistant
  • Non-permanent Researcher
  • Permanent Researcher
  • Pharmacist
  • PhD Student
  • Physician
  • Post-doc
  • Project Manager
  • Research Associate
  • Research Engineer
  • Retired scientist
  • Technician
  • Undergraduate Student
  • Veterinary
  • Visiting Scientist
  • Deputy Director of Center
  • Deputy Director of Department
  • Deputy Director of National Reference Center
  • Deputy Head of Facility
  • Director of Center
  • Director of Department
  • Director of Institute
  • Director of National Reference Center
  • Group Leader
  • Head of Facility
  • Head of Operations
  • Head of Structure
  • Honorary President of the Departement
  • Labex Coordinator
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© Research
Scientific Fields
Diseases
Organisms
Applications
Technique
Starting Date
29
Jun 2015
Status
Ongoing
Members
2
Structures
1
Internal price: free
Internal assisted price: free

About

Every week, on Tuesday mornings, from 10 to 12, Hub engineers are enlisted to provide a direct support to any members of Institut Pasteur seeking for help on bioinformatics or biostatistics related subjects.

Hub engineers can provide support on :

  • Design of experiment (from the statistical point)
  • Analysis of various types of data, including
    • omics data,
    • epidemiological data,
    • time series data,
    • any other experimental data
  • Statistics methods
  • Software development
  • Web tool development
  • Database development
  • Code review

Location :

Yersin Building (24), Ground Floor

As for current restriction from COVID-19 situation, physical open desk have been cancelled.

Starting October 2020, virtual Open Desk will take place every week on Teams.

Please use the following table to find the teams meeting link for each week.

 

Date Group Hub members Teams link
03-08-2021 Group 8 Emeline Perthame – Statistics, transcriptomics, Proteomics
Fabien Mareuil – Web development, Galaxy, Structural bioinformatics,
Claudia Chica – Transcriptomics, Epigenomics, Single cell
Giovanni Bussotti – Genomics, transcriptomics
Join Teams Meeting
10-08-2021 Group 9 Bertrand Néron – Software development
Stéphane Descorps-Declère – Genomics, Database development
Gaël Millot – Genomics, Statistics, R
Pierre Lechat – Tools development, Visualisation, Genomics
Join Teams Meeting
17-08-2021 Group 10 Andjela Davidovic – Modelisation, Statistics
Thomas Cokelaer – Software development, Genomics, Transcriptomics
Corinne Maufrais – Genomics, Transcriptomics
Amine Ghozlane – Metagenomics, structural bioinformatics
Join Teams Meeting
24-08-2021 Group 11 Yann loe-Mie – Genomics, Transcriptomics, Epigenomics, Single cell
François Laurent – Software development, Modelisation
Dmitry Ershov – Image analysis, software development
Bernd Jagla – Single cell, Cytometry data analysis, Transcriptomics
Join Teams Meeting
31-08-2021 Group 12 Freddy Cliquet – Genomics, Tools development
Yoann Dufresne – Algorithms and software development
Sébastien Mella – Single cell, Statistics
Violaine Saint-André – Epigenomics, Genomics
Join Teams Meeting
07-09-2021 Group 1 Rachel Torchet – Web development, User Experience, Interface design
Stevenn Volant – Statistics, R, Metagenomics
Damien Mornico – Genomics, Annotation, Development
Thomas Bigot – Phylogenetics, Comparative genomics
Join Teams Meeting
14-09-2021 Group 2 Rémi Planel – Web development, Galaxy, Genomics
Julien Guglielmini – Phylogenetics
Vincent Guillemot – Statistics, Data integration, R
Amaury Vaysse – Genomics, Statistics
Join Teams Meeting
21-09-2021 Group 3 Nicolas Maillet – Algorithms and software development
Thomas Obadia – Statistics, Epidemiology
Emmanuelle Permal – Genomics, Transcriptomics
Alexis Criscuolo – Phylogenetics
Join Teams Meeting
28-09-2021 Group 4 Anna Zhukova – Phylogenetics, Software development, Network analysis
Rachel Legendre – Transcriptomics, Epigenomics
Hervé Ménager – Web development
Hugo Varet – Statistics, R
Join Teams Meeting
05-10-2021 Group 5 Hanna Julienne – Statistics, Development, Genomics
Benoît Lelandais – Image analysis, Software development, Artificial Intelligence
Amandine Perrin – Software development, Comparative genomics
Frédéric Lemoine – Phylogenetics, Software development, Transcriptomics
Join Teams Meeting
12-10-2021 Group 6 Quentin Giai Gianetto – Statistics, Proteomics
Bryan Brancotte – Web development, Database management
Blaise Li – Software development, RNA data analysis
Etienne Kornobis – Software development, Transcriptomics, Genomics
Join Teams Meeting
19-10-2021 Group 7 Pascal Campagne – Statistics, Genomics, GWAS
Najwa Taib – Phylogenetics
Natalia Pietrosemoli – Systems bioinformatics, Transcriptomics, Proteomics, Metabolomics, omics data analysis and integration
Adrien Pain – Genomics, Transcriptomics
Join Teams Meeting

Access Protocol

  • Every Tuesday morning
  • From 10 to 12
  • Yersin Building (24), Ground Floor
  • On Teams
  • Short term assistance, first contact