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Pasteur Galaxy Platform
Fabien Mareuil (PI)
Galaxy is an open source, web-based platform for data intensive biomedical research. It is developed by the Galaxy Team, which is based at the part of the Center for Comparative Genomics and Bioinformatics at […]
2020On-target activity predictions enable improved CRISPR-dCas9 screens in bacteria, Nucleic Acids Res. 2020 Apr;.
2020PPanGGOLiN: Depicting microbial diversity via a partitioned pangenome graph, PLoS Comput. Biol. 2020 Mar;16(3):e1007732.
2019MicroScope: an integrated platform for the annotation and exploration of microbial gene functions through genomic, pangenomic and metabolic comparative analysis, Nucleic Acids Res. 2019 Oct;.
2018RecPhyloXML: a format for reconciled gene trees, Bioinformatics 2018 11;34(21):3646-3652.
2017Ancestral Genome Estimation Reveals the History of Ecological Diversification in Agrobacterium, Genome Biol Evol 2017 12;9(12):3413-3431.
2017MicroScope-an integrated resource for community expertise of gene functions and comparative analysis of microbial genomic and metabolic data, Brief. Bioinformatics 2017 Sep;.
2016No Evidence That Nitrogen Limitation Influences the Elemental Composition of Isopod Transcriptomes and Proteomes, Mol. Biol. Evol. 2016 10;33(10):2605-20.
2014Ribosomal proteins: toward a next generation standard for prokaryotic systematics?, Mol. Phylogenet. Evol. 2014 Jun;75:103-17.
2012Molecular organization, biochemical function, cellular role and evolution of NfuA, an atypical Fe-S carrier, Mol. Microbiol. 2012 Oct;86(1):155-71.