Présentation
Every Tuesday mornings from 10am to 12am, Hub engineers are enlisted to provide a direct support to any members of Institut Pasteur seeking help on bioinformatics or biostatistics related subjects. You can come directly to Yersin Building (24), Ground Floor.
Please note that open desks are suspended during Christmas & summer breaks, in august.
If you need urgent help from the Hub at that time, please ask a short questions submitted through our web site.
Hub engineers can provide support on :
- Design of experiment (from the statistical point)
- Analysis & integration of various types of data, including but not limited to :
- OMICS data
- epidemiological data
- time series data
- Statistics methods
- Software development
- Web tool development
- Database development
- Code review
- Reproducibility
Please use the following table to see available hub members for future sessions
| Sessions | Group | Hub members |
|---|---|---|
| 12/05/2026 | Group 1 |
Claudia Chica – Transcriptomics, Epigenomics, Single cell Fabien Mareuil – Web development, Galaxy, Structural bioinformatics Adrien Pain – Genomics, Transcriptomics Emeline Perthame – Statistics, transcriptomics, Proteomics, Experimental design |
| 19/05/2026 | Group 2 |
Stéphane Descorps-Declère – Structural annotation Elise Jacquemet – Statistics, Transcriptomics, Experimental design Bertrand Néron – Algorithmics, Software development, Database management Dalila Saulebekova – Genomics, Transcriptomics, Epigenomics, Pipeline development |
|
27/01/2026 26/05/2026 |
Group 3 |
Thomas Cokelaer – Algorithmics, Genomics, Transcriptomics, Assembly, Reproductible pipeline Bernd Jagla – Single cell, Cytometry data analysis, Transcriptomics Gaël Millot – Statistics, Genomics, Image analysis Nicolas Traut – Neuroimaging, Genomics For 27-01-2026 session : Gaël Millot will be replaced by Corinne Maufrais |
|
03/02/2026 02/06/2026 |
Group 4 |
Elodie Chapeaublanc – Web development, Database management Kevin Da Silva Anđela Davidović – Mathematical modelling, scientific computing, numerical simulations, parameter inference, basics in data analysis, statistics and AI Yann Loe-Mie – Genomics, Transcriptomics, Epigenomics, Single cell For 03-02-2026 session : Anđela Davidović will be replaced by Hugo Varet For 03/02/2026 session : Yann Loe-Mie will be replaced by Olivier Mirabeau |
|
10/02/2026 09/06/2026 |
Group 5 |
François Laurent – Software development, Modelisation, Statistics Pierre Lechat – Data Visualization, Software development, Genomic Olivier Mirabeau – Transcriptomics, Genomics, Statistics, Single cell Violaine Saint-André – Epigenomics, Multi-dimensional data analysis and integration, Transcriptional Regulatory Networks, Human cohorts For 10/02/2026 session : Olivier Mirabeau will be replaced by Yann Loe-Mie |
|
17/02/2026 16/06/2026 |
Group 6 |
Almira Chervova – Epigenomics, Transcriptomics, Statistics, Single cell Johann Dreo – Precision Medicine, Cancer, Explainable AI, Knowledge Graphs, Deep Learning, Ontology building, Optimization/Hyper-parameters setting, Algorithmics, Mathematical modeling, Software development, Decision support systems, Path Planning Sébastien Mella – Single Cell, Statistics Juliette Meyer – Statistics |
|
24/02/2026 23/06/2026 |
Group 7 |
Julien Fumey – Genomics, Phylogenetics, Web dev, Nextflow Julia Kende – Phylogenetics, Software development & Algorithmics Maoussi Lhuillier-Akakpo – Machine learning, Data representation and encoding, Foundation models, Python Rania Ouazahrou – Transcriptomics, Genomics |
|
03/03/2026 30/06/2026 |
Group 8 |
Freddy Cliquet – Algorithmics, Statistics, System biology Vincent Laville – Statistics, Development, Genomics Hélène Lopez-Maestre – Genomics, Transcriptomics, Single Cell Raphaël Tackx – Web development |
|
10/03/2026 07/07/2026 |
Group 9 |
Amanda Dieuaide – Web development Etienne Kornobis – Software development, Transcriptomics, Genomics Nathalie Lehmann – Single Cell, Transcriptomics, Pipeline development, Genome annotation Corinne Maufrais – Genomics, Data management For 10-03-2026 session : Corinne Maufrais will be replaced by Gaël Millot |
|
17/03/2026 14/07/2026 |
Group 10 |
Artem Baidaliuk – Virus discovery in metagenomic/metatranscriptomic data Stephan Fischer – Single Cell, Genomics Mickael Orgeur – Genomics, Transcriptomics Amandine Perrin – Software development, Comparative genomics |
|
24/03/2026 21/07/2026 |
Group 11 |
Jérôme Bourret Rémi Planel – Web development, Database management, Galaxy Hugo Varet – Statistics, R, Transcriptomics For 24-03-2026 session : Hugo Varet will be replaced by Anđela Davidović |
|
31/03/2026 28/07/2026 |
Group 12 |
Thomas Bigot – Sequence alignments, databases, taxonomic classification, divergent sequences detection, phylogeny Julie Lao – Projet ABRomics Damien Mornico – Genomics, Paleogenomics, (Transcriptomics) Stevenn Volant – Statistics, Metagenomics, Rshiny |
|
07/04/2026 01/09/2026 |
Group 13 |
Amine Ghozlane – Metagenomic, Software Development Julien Gugluielmini – Phylogenetics, Genomics Amaury Vaysse – Genomics, R, GWAS |
| 14/04/2026 | Group 14 |
Frédéric Lemoine – Phylogenetics, Software development, Transcriptomics Nicolas Maillet -Algorithmics, Software development, Metagenomics, Stringology Arnaud Meng – Single Cell, Transcriptomics, Mass spectometry, pipeline Development Thomas Obadia – Statistics, Epidemiology |
| 21/04/2026 | Group 15 |
Joseph Josephides – Single Cell, Genomics, Transcriptomics, Machine Learning Rachel Legendre – Transcriptomics, Epigenomics Simon Malesys – Web development and databases, Javascript, Vue.js, Node.js Emmanuelle Permal – Genomics, Development, Transcriptomics |
| 28/04/2026 | Group 16 |
Agnès Baud – Metagenomic Quentin Giai Gianetto – Statistics, R, Proteomics, Protein-protein interaction networks, Pathway enrichment analysis Blaise Li – Software development, Automation, Reproducibility, Python, command-line Marie Schmit – Software development, Data integration |
| 05/05/2026 | Group 17 |
Bryan Brancotte – Kubernetes, Web development, Software development Pascal Campagne – Statistics, Genomics, GWAS Natalia Pietrosemoli – Systems bioinformatics, Transcriptomics, Proteomics, Metabolomics Najwa Taib – Phylogenetics |