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Courses
Bioinformatics program for PhD students 2023 2024
This training program in statistics, bioinformatics and image analysis, financed by INCEPTION program, begins with a mandatory common core during which we will present all the tracks, and follow short courses on computer science, […]
Bioinformatics and Biostatistics HUB
Image Analysis Hub
INCEPTION – Institut Convergence for the study of Emergence of Pathology Through Individuals and Populations
Research and Resource Centre for Scientific Informatics
Emeline Perthame
Emmanuelle Permal
Marvin Albert
Jean-Yves Tinevez
Victoire Baillet
Thomas Bigot
Pascal Campagne
Elodie Chapeaublanc
Claudia Chica
Anđela Davidović
Stephan Fischer
Amine Ghozlane
Julien Guglielmini
Vincent Guillemot
Elise Jacquemet
Bernd Jagla
Hanna Julienne
Julia Kende
Vincent Laville
Frédéric Lemoine
Gaëlle Letort
Blaise Li
Yann Loe-Mie
Hélène Lopez-Maestre
Nicolas Maillet
Sébastien MELLA
Juliette Meyer
Olivier Mirabeau
Damien Mornico
Thomas Obadia
Adrien Pain
Minh-Son Phan
Natalia Pietrosemoli
Stéphane Rigaud
Violaine Saint-André
Rachel Torchet
Hugo Varet
Amaury Vaysse
Laura Xénard
2023-10-23 09:30:00
2024-06-28 17:00:00
Europe/Paris
Bioinformatics program for PhD students 2023 2024
This training program in statistics, bioinformatics and image analysis, financed by INCEPTION program, begins with a mandatory common core during which we will present all the tracks, and follow short courses on computer science, […]
25-28 Rue du Docteur Roux, Paris, France
Bioinformatics program for PhD students 2022-2023
This training program in statistics, bioinformatics and image analysis begins with a mandatory common core during which we will present all the tracks, and follow short courses on computer science, reproducible research, experimental design […]
Bioinformatics and Biostatistics HUB
Image Analysis Hub
Expertise group : SysBio – System Bioinformatics
INCEPTION – Institut Convergence for the study of Emergence of Pathology Through Individuals and Populations
Research and Resource Centre for Scientific Informatics
Emmanuelle Permal
Emeline Perthame
Jean-Yves Tinevez
Blaise Li
Sébastien MELLA
Anđela Davidović
Pascal Campagne
Thomas Obadia
Elise Jacquemet
Violaine Saint-André
Hanna Julienne
Thomas Bigot
Frédéric Lemoine
Nicolas Maillet
Claudia Chica
Julien Guglielmini
Vincent Guillemot
Bernd Jagla
Vincent Laville
Benoît Lelandais
Gaëlle Letort
Yann Loe-Mie
Hélène Lopez-Maestre
Marion Louveaux
Olivier Mirabeau
Damien Mornico
Adrien Pain
Natalia Pietrosemoli
Stéphane Rigaud
Hugo Varet
Amaury Vaysse
Minh-Son Phan
Marvin Albert
2022-10-21 09:30:00
2023-06-30 18:00:00
Europe/Paris
Bioinformatics program for PhD students 2022-2023
This training program in statistics, bioinformatics and image analysis begins with a mandatory common core during which we will present all the tracks, and follow short courses on computer science, reproducible research, experimental design […]
25-28 Rue du Docteur Roux, Paris, France
Introduction to R and statistics – RS1
virtual session (on Teams) in French. The course material for this module is available on-line permanently and is hopefully detailed enough to be studied in a self-learning mode: https://hub-courses.pages.pasteur.fr/R_pasteur_phd/First_steps_RStudio.html Part of PhD course R […]
2021-11-02 09:00:00
2021-11-05 00:30:00
Europe/Paris
Introduction to R and statistics – RS1
virtual session (on Teams) in French. The course material for this module is available on-line permanently and is hopefully detailed enough to be studied in a self-learning mode: https://hub-courses.pages.pasteur.fr/R_pasteur_phd/First_steps_RStudio.html Part of PhD course R […]
Introduction to R and statistics – RS1
Part of the PhD course “R and statistics”. The course material for this module is available on-line permanently and is hopefully detailed enough to be studied in a self-learning mode: https://hub-courses.pages.pasteur.fr/R_pasteur_phd/First_steps_RStudio.html More info on […]
2022-04-04 09:30:00
2022-04-06 17:00:00
Europe/Paris
Introduction to R and statistics – RS1
Part of the PhD course “R and statistics”. The course material for this module is available on-line permanently and is hopefully detailed enough to be studied in a self-learning mode: https://hub-courses.pages.pasteur.fr/R_pasteur_phd/First_steps_RStudio.html More info on […]
Institut Pasteur, Rue du Docteur Roux, Paris, France
Bioinformatics program for PhD students 2020-2021
This mandatory training program, required for all Institut Pasteur PhD students, begins with a group of common core courses including a knowledge base in reproducible research, R Programming and Statistics. Each student then can […]
Image Analysis Hub
Bioinformatics and Biostatistics HUB
INCEPTION – Institut Convergence for the study of Emergence of Pathology Through Individuals and Populations
Computational Biology
Center for Technological Resources and Research
Vincent Guillemot
Christophe Malabat
Jean-Yves Tinevez
Marie-Agnès Dillies
Frédéric Lemoine
Nicolas Maillet
Blaise Li
Stevenn Volant
Pascal Campagne
Hugo Varet
Hanna Julienne
Violaine Saint-André
Julien Guglielmini
Thomas Bigot
Quentin Giai Gianetto
Claudia Chica
Rachel Legendre
Adrien Pain
Natalia Pietrosemoli
Emeline Perthame
Stéphane Rigaud
Benoît Lelandais
Dmitry Ershov
Sébastien MELLA
Anđela Davidović
Thomas Obadia
Véronique Hourdel
Amine Ghozlane
Alexis Criscuolo
Amaury Vaysse
2020-10-15 09:30:00
2021-06-03 17:00:00
Europe/Paris
Bioinformatics program for PhD students 2020-2021
This mandatory training program, required for all Institut Pasteur PhD students, begins with a group of common core courses including a knowledge base in reproducible research, R Programming and Statistics. Each student then can […]
25-28 Rue du Dr Roux, 75015 Paris, France
Projects
Former Teams
Publications
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2024Patterned apoptosis has an instructive role for local growth and tissue shape regulation in a fast-growing epithelium., Curr Biol 2024 Jan; (): .
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2022Parameter inference for stochastic biochemical models from perturbation experiments parallelised at the single cell level, PLoS Comput Biol 2022 Mar; 18(3): e1009950.
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2021Robustness of epithelial sealing is an emerging property of local ERK feedback driven by cell elimination., Dev Cell 2021 06; 56(12): 1700-1711.e8.
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2020Modelling the action potential propagation in a heart with structural heterogeneities: From high-resolution MRI to numerical simulations., Int J Numer Method Biomed Eng 2021 11; 37(11): e3322.
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2019Modified bidomain model with passive periodic heterogeneities, DCDS-S 2019; August 2020 13(8): 2231-2258.
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2017Image-Based Modeling of the Heterogeneity of Propagation of the Cardiac Action Potential. Example of Rat Heart High Resolution MRI, International Conference on Functional Imaging and Modeling of the Heart, pp. 260-270. Springer, Cham, 2017..
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2016Multiscale mathematical modelling of structural heterogeneities in cardiac electrophysiology, PhD diss., Université de Bordeaux, 2016..
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2015Microscopic Modelling of the Non-Linear Gap Junction Channels, Computing in Cardiology Conference (CinC), 2015, pp. 425-428. IEEE, 2015..
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2014The modified bidomain model with periodic diffusive inclusions, Computing in Cardiology Conference (CinC), 2014 (pp. 1033-1036). IEEE, 2014..