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2024Semi-Supervised Segmentation with Topological Penalization for Quantifying Retinal Degeneration in Histological Sections, 2024 IEEE International Symposium on Biomedical Imaging (ISBI).
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2024A machine learning approach to distinguish different subdiffusive dynamics in particle tracking, International Symposium on Biomedical Imaging (ISBI), IEEE, May 2024, Athens (Greece), Greece.
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2024PARTICLE TRACKING IN BIOLOGICAL IMAGES WITH OPTICAL-FLOW ENHANCED KALMAN FILTERING, International Symposium on Biomedical Imaging (ISBI), IEEE, May 2024, Athens (Greece), France.
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2024Sparse Non-Negative Matrix Factorization for Preclinical Bioluminescent Imaging, 2023 IEEE 20th International Symposium on Biomedical Imaging (ISBI).
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2024Time-Series Analysis of Cellular Shapes Using Transported Velocity Fields, SSRN.
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2010Compressed Sensing for Digital Holographic Microscopy, IEEE International Symposium on Biomedical Imaging, ISBI, 2010. Best Student Paper Award.
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2009Compressed Sensing in microscopy with random projections in the Fourier domain, Image Processing (ICIP), 2009 16th IEEE International Conference on.
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2009[Recent approaches of quantification of interstitial fibrosis in renal transplantation], Med Sci (Paris) 2009 Nov;25(11):945-50.
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2009Interstitial fibrosis quantification in renal transplant recipients randomized to continue cyclosporine or convert to sirolimus, Am. J. Transplant. 2009 Nov;9(11):2552-60.
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2009Cellular and behavioral effects of cranial irradiation of the subventricular zone in adult mice, PLoS ONE 2009;4(9):e7017.
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2009Compressed sensing in biological microscopy, Proc. SPIE 7446, Wavelets XIII, 744605 (September 04, 2009); doi:10.1117/12.826275.
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2009Blind deconvolution for thin-layered confocal imaging, Appl Opt 2009 Aug;48(22):4437-48.
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2009P2X1 ion channels promote neutrophil chemotaxis through Rho kinase activation, J. Immunol. 2009 Aug;183(4):2801-9.
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2009In vivo colocalisation of oskar mRNA and trans-acting proteins revealed by quantitative imaging of the Drosophila oocyte, PLoS ONE 2009;4(7):e6241.
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2009A compressed sensing approach for biological microscopic image processing, Biomedical Imaging: From Nano to Macro, 2009. ISBI '09. IEEE International Symposium on.
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2009Tracking algorithms chase down pathogens, Biotechnol J 2009 Jun;4(6):838-45.
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2009WAFL, a new protein involved in regulation of early endocytic transport at the intersection of actin and microtubule dynamics., Exp Cell Res 2009 Apr; 315(6): 1040-52.
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2009Biomarker discovery in asthma-related inflammation and remodeling, Proteomics 2009 Apr;9(8):2163-70.
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2009Prions hijack tunnelling nanotubes for intercellular spread, Nat. Cell Biol. 2009 Mar;11(3):328-36.
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2009Quantitative analysis of virus and plasmid trafficking in cells, Phys Rev E Stat Nonlin Soft Matter Phys 2009 Jan;79(1 Pt 1):011921.
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2009A Compressed Sensing Approach for Biological Microscopy Image Denoising, SPARS'09 - Signal Processing with Adaptive Sparse Structured Representations, Inria Rennes - Bretagne Atlantique, Apr 2009, Saint Malo, France.
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2008A dual role for actin and microtubule cytoskeleton in the transport of Golgi units from the nurse cells to the oocyte across ring canals, Mol. Biol. Cell 2009 Jan;20(1):556-68.
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2008High-resolution statistical mapping reveals gene territories in live yeast, Nat. Methods 2008 Dec;5(12):1031-7.
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2008Learning and survival of newly generated neurons: when time matters, J. Neurosci. 2008 Nov;28(45):11511-6.
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2008Automated nuclear analysis of Leishmania major telomeric clusters reveals changes in their organization during the parasite’s life cycle, PLoS ONE 2008;3(6):e2313.
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2008Improving single particle localization with an empirically calibrated Gaussian kernel, IEEE International Symposium on Biomedical Imaging ISBI, 2008.
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2008Proteomics for prediction and characterization of response to infliximab in Crohn’s disease: a pilot study, Clin. Biochem. 2008 Aug;41(12):960-7.
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2008Monomeric calgranulins measured by SELDI-TOF mass spectrometry and calprotectin measured by ELISA as biomarkers in arthritis, Clin. Chem. 2008 Jun;54(6):1066-75.
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2008Quantifying intermittent transport in cell cytoplasm, Phys Rev E Stat Nonlin Soft Matter Phys 2008 Mar;77(3 Pt 1):030901.
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2007Quantification of interstitial fibrosis by image analysis on routine renal biopsy in patients receiving cyclosporine, Transplantation 2007 Dec;84(12):1595-601.
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2007Quantification of interstitial fibrosis by image analysis on routine renal biopsy 1 year after transplantation in patients managed by C2 monitoring of cyclosporine microemulsion, Transplant. Proc. 2007 Oct;39(8):2560-2.
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2007A novel formulation of inhaled doxycycline reduces allergen-induced inflammation, hyperresponsiveness and remodeling by matrix metalloproteinases and cytokines modulation in a mouse model of asthma, Biochem. Pharmacol. 2008 Jan;75(2):514-26.
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2007Random subwindows and extremely randomized trees for image classification in cell biology, BMC Cell Biol. 2007;8 Suppl 1:S2.
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2007An automatic image analysis approach to quantify stained cell cultures, Cell. Mol. Biol. (Noisy-le-grand) 2007;53(2):44-50.
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2007PREDetector: a new tool to identify regulatory elements in bacterial genomes, Biochem. Biophys. Res. Commun. 2007 Jun;357(4):861-4.
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2007Gaussian approximations of fluorescence microscope point-spread function models, Appl Opt 2007 Apr;46(10):1819-29.
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2007Parametric blind deconvolution for confocal laser scanning microscopy, Conf Proc IEEE Eng Med Biol Soc 2007;2007:6532-5.
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2006Olfactory discrimination learning increases the survival of adult-born neurons in the olfactory bulb., J Neurosci 2006 Oct; 26(41): 10508-13.
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2006Quantitative four-dimensional tracking of cytoplasmic and nuclear HIV-1 complexes, Nat. Methods 2006 Oct;3(10):817-24.
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2006Cerebral microcirculation shear stress levels determine Neisseria meningitidis attachment sites along the blood-brain barrier, J. Exp. Med. 2006 Aug;203(8):1939-50.
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2006SAGA interacting factors confine sub-diffusion of transcribed genes to the nuclear envelope, Nature 2006 Jun;441(7094):770-3.
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2006Multiple particle tracking in 3-D+t microscopy: method and application to the tracking of endocytosed quantum dots, IEEE Trans Image Process 2006 May;15(5):1062-70.
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2006Richardson-Lucy algorithm with total variation regularization for 3D confocal microscope deconvolution, Microsc. Res. Tech. 2006 Apr;69(4):260-6.
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2006Human tumor necrosis factor is a chemoattractant for the parasite Entamoeba histolytica, Infect. Immun. 2006 Feb;74(2):1407-11.
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2006Telomere tethering at the nuclear periphery is essential for efficient DNA double strand break repair in subtelomeric region, J. Cell Biol. 2006 Jan;172(2):189-99.
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2005Coupled parametric active contours, IEEE Trans Pattern Anal Mach Intell 2005 Nov;27(11):1838-42.
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2005Segmenting and tracking fluorescent cells in dynamic 3-D microscopy with coupled active surfaces, IEEE Trans Image Process 2005 Sep;14(9):1396-410.
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2005Neonatal and adult neurogenesis provide two distinct populations of newborn neurons to the mouse olfactory bulb, J. Neurosci. 2005 Jul;25(29):6816-25.
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2005Human MxA protein participates to the interferon-related inhibition of hepatitis B virus replication in female transgenic mice, J. Hepatol. 2005 Dec;43(6):965-72.
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2005Myosin II and the Gal-GalNAc lectin play a crucial role in tissue invasion by Entamoeba histolytica, Cell. Microbiol. 2005 Jan;7(1):19-27.
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2004Cortactin and Crk cooperate to trigger actin polymerization during Shigella invasion of epithelial cells, J. Cell Biol. 2004 Jul;166(2):225-35.
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2004Imaging movement of malaria parasites during transmission by Anopheles mosquitoes, Cell. Microbiol. 2004 Jul;6(7):687-94.
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2003Anti-inflammatory role for intracellular dimeric immunoglobulin a by neutralization of lipopolysaccharide in epithelial cells, Immunity 2003 Jun;18(6):739-49.
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2003The metabotropic glutamate receptor mGluR5 is endocytosed by a clathrin-independent pathway, J. Biol. Chem. 2003 Apr;278(14):12222-30.
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2003EhPAK, a member of the p21-activated kinase family, is involved in the control of Entamoeba histolytica migration and phagocytosis, J. Cell. Sci. 2003 Jan;116(Pt 1):61-71.
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2002Membrane-cytoskeleton interactions during the formation of the immunological synapse and subsequent T-cell activation, Immunol. Rev. 2002 Nov;189:123-35.
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2002Segmentation and tracking of migrating cells in videomicroscopy with parametric active contours: a tool for cell-based drug testing, IEEE Trans Med Imaging 2002 Oct;21(10):1212-21.
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2002Nuclear architecture and spatial positioning help establish transcriptional states of telomeres in yeast, Nat. Cell Biol. 2002 Mar;4(3):214-21.
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2002A central role for Plasmodium falciparum subtelomeric regions in spatial positioning and telomere length regulation, EMBO J. 2002 Feb;21(4):815-24.
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2001The membrane-microfilament linker ezrin is involved in the formation of the immunological synapse and in T cell activation., Immunity 2001 Nov; 15(5): 715-28.
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2001Dual function of rhoD in vesicular movement and cell motility, Eur. J. Cell Biol. 2001 Jun;80(6):391-8.
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2000Distribution of a potential p21-activated serine/threonine kinase (PAK) in Entamoeba histolytica, Arch. Med. Res. 2000 Jul-Aug;31(4 Suppl):S128-30.
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2000Nuclear pore complexes in the organization of silent telomeric chromatin, Nature 2000 Jan;403(6765):108-12.
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1999Myosin IB from Entamoeba histolytica is involved in phagocytosis of human erythrocytes, J. Cell. Sci. 1999 Apr;112 ( Pt 8):1191-201.
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1999Receptor-mediated substrate translocation through the nuclear pore complex without nucleotide triphosphate hydrolysis, Curr. Biol. 1999 Jan;9(1):30-41.
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1999Dual-color visualization of trans-Golgi network to plasma membrane traffic along microtubules in living cells, J. Cell. Sci. 1999 Jan;112 ( Pt 1):21-33.
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1998Interferon alpha inhibits a Src-mediated pathway necessary for Shigella-induced cytoskeletal rearrangements in epithelial cells, J. Cell Biol. 1998 Nov;143(4):1003-12.
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1998Virulence and functions of myosin II are inhibited by overexpression of light meromyosin in Entamoeba histolytica, Mol. Biol. Cell 1998 Jun;9(6):1537-47.
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1998A role for microtubule dynamics in phagosome movement, J. Cell. Sci. 1998 Feb;111 ( Pt 3):303-12.
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1998Localization of three human polypeptide GalNAc-transferases in HeLa cells suggests initiation of O-linked glycosylation throughout the Golgi apparatus, J. Cell. Sci. 1998 Jan;111 ( Pt 1):45-60.
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1997Cellular expression and proteolytic processing of presenilin proteins is developmentally regulated during neuronal differentiation, J. Neurochem. 1997 Dec;69(6):2432-40.
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1997Dendroaxonal transcytosis of transferrin in cultured hippocampal and sympathetic neurons, J. Neurosci. 1997 Dec;17(23):9026-34.
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1997Molecular requirements for bi-directional movement of phagosomes along microtubules, J. Cell Biol. 1997 Apr;137(1):113-29.
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1993Two rhombomeres are altered in Hoxa-1 mutant mice, Development 1993 Oct;119(2):319-38.
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1992Regional expression of the homeobox gene Nkx-2.2 in the developing mammalian forebrain, Neuron 1992 Feb;8(2):241-55.
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1991[Functional microscopic imaging of the thyroid gland with the help of analytical ion microscopy], Pathol. Biol. 1991 Dec;39(10):1029-37.
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1991Image registration and distortion correction in ion microscopy, J Microsc 1991 Dec;164(Pt 3):263-72.
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1990Digital correlation of ion and optical microscopic images: application to the study of thyroglobulin chemical modification, Scanning Microsc. 1990 Dec;4(4):825-8.
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1989Microcomputer system for ion microscopy digital imaging and processing, J Microsc 1989 Oct;156(Pt 1):105-14.
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1986Excimer laser surgery of the cornea: qualitative and quantitative aspects of photoablation according to the energy density, J Cataract Refract Surg 1986 Jan;12(1):27-33.