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Bioinformatics program for PhD students 2022-2023
This training program in statistics, bioinformatics and image analysis begins with a mandatory common core during which we will present all the tracks, and follow short courses on computer science, reproducible research, experimental design […]
Hub de Bioinformatique et Biostatistique
Hub d’Analyse d’Images
Groupe d’expertise : SysBio – Bio-informatique des Systèmes
INCEPTION – INstitut Convergences pour l’étude de l’Émergence des Pathologies au Travers des Individus et des populatiONs
Centre de Ressources et Recherche en Informatique
Emmanuelle Permal
Emeline Perthame
Jean-Yves Tinevez
Blaise Li
Sébastien MELLA
Anđela Davidović
Pascal Campagne
Thomas Obadia
Elise Jacquemet
Violaine Saint-André
Hanna Julienne
Thomas Bigot
Frédéric LEMOINE
Nicolas Maillet
Matthew Albert
Claudia Chica
Stéphane Dallongeville
Julien Guglielmini
Vincent Guillemot
Bernd Jagla
Vincent Laville
Benoît Lelandais
Gaëlle Letort
Yann Loe-Mie
Hélène Lopez-Maestre
Marion Louveaux
Olivier Mirabeau
Damien Mornico
Adrien Pain
Natalia Pietrosemoli
Stéphane Rigaud
Hugo Varet
Amaury Vaysse
Minh-Son Phan
Marvin Albert
2022-10-21 09:30:00
2023-06-30 18:00:00
Europe/Paris
Bioinformatics program for PhD students 2022-2023
This training program in statistics, bioinformatics and image analysis begins with a mandatory common core during which we will present all the tracks, and follow short courses on computer science, reproducible research, experimental design […]
Bioinformatics program for PhD students 2020-2021
This mandatory training program, required for all Institut Pasteur PhD students, begins with a group of common core courses including a knowledge base in reproducible research, R Programming and Statistics. Each student then can […]
Hub d’Analyse d’Images
Hub de Bioinformatique et Biostatistique
INCEPTION – INstitut Convergences pour l’étude de l’Émergence des Pathologies au Travers des Individus et des populatiONs
Biologie Computationnelle
Centre de Ressources et Recherches Technologiques
Vincent Guillemot
Christophe Malabat
Jean-Yves Tinevez
Marie-Agnès Dillies
Frédéric LEMOINE
Nicolas Maillet
Blaise Li
Stevenn Volant
Pascal Campagne
Hugo Varet
Hanna Julienne
Violaine Saint-André
Julien Guglielmini
Thomas Bigot
Quentin Giai Gianetto
Claudia Chica
Rachel Legendre
Adrien Pain
Natalia Pietrosemoli
Emeline Perthame
Stéphane Rigaud
Benoît Lelandais
Dmitry Ershov
Sébastien MELLA
Anđela Davidović
Thomas Obadia
Véronique Hourdel
Amine Ghozlane
Alexis Criscuolo
Amaury Vaysse
2020-10-15 09:30:00
2021-06-03 17:00:00
Europe/Paris
Bioinformatics program for PhD students 2020-2021
This mandatory training program, required for all Institut Pasteur PhD students, begins with a group of common core courses including a knowledge base in reproducible research, R Programming and Statistics. Each student then can […]
25-28 Rue du Dr Roux, 75015 Paris, France
Introduction to Data Analysis
This four-week graduate level course will give participants basic skills and hands-on training in statistics and descriptive data analysis. This course is (primarily) dedicated to first year PhD students of the Institut Pasteur (each […]
2018-10-22 09:00:00
2018-11-20 00:00:00
Europe/Paris
Introduction to Data Analysis
This four-week graduate level course will give participants basic skills and hands-on training in statistics and descriptive data analysis. This course is (primarily) dedicated to first year PhD students of the Institut Pasteur (each […]
28 Rue du Dr Roux, Paris, France
6ème école de bioinformatique AVIESAN-IFB
Objectifs La formation s’adresse à des chercheurs et ingénieurs directement impliqués dans des projets “Next Generation Sequencing” (NGS). Cette édition de l’école s’adresse aux nouveaux enjeux technologiques: elle inclura notamment une ouverture aux technologies […]
2017-11-12 18:00:00
2017-11-17 15:00:00
Europe/Paris
6ème école de bioinformatique AVIESAN-IFB
Objectifs La formation s’adresse à des chercheurs et ingénieurs directement impliqués dans des projets “Next Generation Sequencing” (NGS). Cette édition de l’école s’adresse aux nouveaux enjeux technologiques: elle inclura notamment une ouverture aux technologies […]
Station Biologique de Roscoff, Place Georges Teissier, Roscoff, France
Projets
Logiciel
Anciennes Équipes
CV
EXPERIENCE:
2016 – 2018: Postdoctoral research fellow – Institut Curie – CNRS UMR3244/UPMC
2013 – 2016: Postdoctoral research associate – Whitehead Institute/MIT – Pr. Richard Young Lab
EDUCATION:
M.Sc. in Bioinformatics, Université Paris VII, 2012
Ph.D in Molecular Biology, Genetics, Université Paris VI, 2010
Publications
Télécharger-
2022Defective activation and regulation of type I interferon immunity is associated with increasing COVID-19 severity., Nat Commun 2022 Nov; 13(1): 7254.
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2022Early IFNβ secretion determines variable downstream IL-12p70 responses upon TLR4 activation., Cell Rep 2022 Jun; 39(13): 110989.
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2022Tuberculosis alters immune-metabolic pathways resulting in perturbed IL-1 responses., Front Immunol 2022 ; 13(): 897193.
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2021Computational biology approaches for mapping transcriptional regulatory networks., Comput Struct Biotechnol J 2021 ; 19(): 4884-4895.
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2017Diversification of human plasmacytoid predendritic cells in response to a single stimulus, Nat. Immunol. 2018 Jan;19(1):63-75.
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2016Stress from Nucleotide Depletion Activates the Transcriptional Regulator HEXIM1 to Suppress Melanoma, Mol. Cell 2016 Apr;62(1):34-46.
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2016Models of human core transcriptional regulatory circuitries, Genome Res. 2016 Mar;26(3):385-96.
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2013Super-enhancers in the control of cell identity and disease, Cell 2013 Nov;155(4):934-47.
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2011Histone H3 lysine 9 trimethylation and HP1γ favor inclusion of alternative exons, Nat. Struct. Mol. Biol. 2011 Mar;18(3):337-44.
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2009Interaction of HP1 and Brg1/Brm with the globular domain of histone H3 is required for HP1-mediated repression, PLoS Genet. 2009 Dec;5(12):e1000769.
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