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Cours
Bioinformatics program for PhD students 2020-2021
This mandatory training program, required for all Institut Pasteur PhD students, begins with a group of common core courses including a knowledge base in reproducible research, R Programming and Statistics. Each student then can […]
Hub d’Analyse d’Images
Hub de Bioinformatique et Biostatistique
INCEPTION – INstitut Convergences pour l’étude de l’Émergence des Pathologies au Travers des Individus et des populatiONs
Biologie Computationnelle
Centre de Ressources et Recherches Technologiques
Vincent Guillemot
Christophe Malabat
Jean-Yves Tinevez
Marie-Agnès Dillies
Frédéric LEMOINE
Nicolas Maillet
Blaise Li
Stevenn Volant
Pascal Campagne
Hugo Varet
Hanna Julienne
Violaine Saint-André
Julien Guglielmini
Thomas Bigot
Quentin Giai Gianetto
Claudia Chica
Rachel Legendre
Adrien Pain
Natalia Pietrosemoli
Emeline Perthame
Stéphane Rigaud
Benoît Lelandais
Dmitry Ershov
Sébastien MELLA
Anđela Davidović
Thomas Obadia
Véronique Hourdel
Amine Ghozlane
Alexis Criscuolo
Amaury Vaysse
2020-10-15 09:30:00
2021-06-03 17:00:00
Europe/Paris
Bioinformatics program for PhD students 2020-2021
This mandatory training program, required for all Institut Pasteur PhD students, begins with a group of common core courses including a knowledge base in reproducible research, R Programming and Statistics. Each student then can […]
25-28 Rue du Dr Roux, 75015 Paris, France
Introduction to Data Analysis
This four-week graduate level course will give participants basic skills and hands-on training in statistics and descriptive data analysis. This course is (primarily) dedicated to first year PhD students of the Institut Pasteur (each […]
Hub de Bioinformatique et Biostatistique
INCEPTION – INstitut Convergences pour l’étude de l’Émergence des Pathologies au Travers des Individus et des populatiONs
Marie-Agnès Dillies
Stéphane Descorps Declere
Vincent Guillemot
Emeline Perthame
Stevenn Volant
Hugo Varet
Thomas Obadia
Anne Biton
Félix Cheysson
Gaël Millot
Quentin Giai Gianetto
2017-10-16 09:00:00
2017-11-17 12:00:00
Europe/Paris
Introduction to Data Analysis
This four-week graduate level course will give participants basic skills and hands-on training in statistics and descriptive data analysis. This course is (primarily) dedicated to first year PhD students of the Institut Pasteur (each […]
28 Rue du Docteur Roux, Paris, France
Introduction to Data Analysis
This four-week graduate level course will give participants basic skills and hands-on training in statistics and descriptive data analysis. This course is (primarily) dedicated to first year PhD students of the Institut Pasteur (each […]
2018-10-22 09:00:00
2018-11-20 00:00:00
Europe/Paris
Introduction to Data Analysis
This four-week graduate level course will give participants basic skills and hands-on training in statistics and descriptive data analysis. This course is (primarily) dedicated to first year PhD students of the Institut Pasteur (each […]
28 Rue du Dr Roux, Paris, France
Introduction to Data Analysis
This four-week graduate level course will give participants basic skills and hands-on training in statistics and descriptive data analysis. This course is (primarily) dedicated to first year PhD students of the Institut Pasteur (each […]
Hub de Bioinformatique et Biostatistique
INCEPTION – INstitut Convergences pour l’étude de l’Émergence des Pathologies au Travers des Individus et des populatiONs
Marie-Agnès Dillies
Stéphane Descorps Declere
Vincent Guillemot
Emeline Perthame
Hugo Varet
Stevenn Volant
Thomas Obadia
Gaël Millot
Quentin Giai Gianetto
Anne Biton
Félix Cheysson
Christophe Becavin
2018-01-08 09:00:00
2018-02-02 00:00:00
Europe/Paris
Introduction to Data Analysis
This four-week graduate level course will give participants basic skills and hands-on training in statistics and descriptive data analysis. This course is (primarily) dedicated to first year PhD students of the Institut Pasteur (each […]
28 Rue du Docteur Roux, Paris, France
CV
(EN)
Positions
Since February 2017 Research engineer, Hub of Bioinformatics and Biostatistics, Département de Biologie Computationnelle, Institut Pasteur
2015-2017 Post doctoral position, team MISTIS, INRIA Grenoble
Topic: Robust clustering and robust non linear regression in high dimension. Collaboration with Florence Forbes (INRIA).
2012-2015 PhD thesis in Statistics, Applied Mathematics Department of Agrocampus-Ouest and Université Rennes 1, Rennes
Topic: Stability of variable selection in regression and classification issues for correlated data in high dimension. Supervisor: David Causeur (Agrocampus-Ouest, IRMAR).
Education
2015 PhD thesis in Statistics, Applied Mathematics Department of Agrocampus-Ouest and Université Rennes 1, Rennes
2012 ISUP degree (Institut de Statistique de l’UPMC), Université Pierre et Marie Curie, Paris
2012 Master 2 of Statistics, Université Pierre et Marie Curie, Paris
Links
R code to run simulations of the article Devijver E. and Perthame E., Prediction regions through Inverse Regression, Journal of Machine Learning Research 21 (2020) 1-24, available here
Publications
Télécharger-
2021Gene expression analysis in EBV-infected ataxia-telangiectasia cell lines by RNA-sequencing reveals protein synthesis defect and immune abnormalities., Orphanet J Rare Dis 2021 Jun; 16(1): 288.
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2021Patient-derived Glioblastoma Stem cells transfer mitochondria through Tunneling Nanotubes in Tumor Organoids., Biochem J 2020 11; (): .
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2021Systemic viral spreading and defective host responses are associated with fatal Lassa fever in macaques., Commun Biol 2021 Jan; 4(1): 27.
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2020Prediction regions through Inverse Regression, Journal of Machine Learning Research 21(113) (2020) 1-24.
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2020The impact of rainfall on drinking water quality in Antananarivo, Madagascar., PLoS One 2020 ; 15(6): e0218698.
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2019Vaccines inducing immunity to Lassa virus glycoprotein and nucleoprotein protect macaques after a single shot., Sci Transl Med 2019 10; 11(512): .
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2019A functional generalized F‐test for signal detection with applications to event‐related potentials significance analysis, doi: 10.1111/biom.13118.
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2019IFITM proteins inhibit placental syncytiotrophoblast formation and promote fetal demise., Science 2019 07; 365(6449): 176-180.
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2018Inverse regression approach to robust nonlinear high-to-low dimensional mapping, Journal of Multivariate Analysis Volume 163, January 2018, Pages 1-14.
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2017Infection of Ixodes ricinus by Borrelia burgdorferi sensu lato in peri-urban forests of France, PLoS ONE 2017;12(8):e0183543.
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