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Présentation
Cours
Pasteur course Advanced Bioimage Analysis with Artificial Intelligence (AI) – 2026
Topics Both tracks of the course have a specific focus on hands-on and interactive tutorials. They are meant to be convivial and foster a collaborative atmosphere between students and teachers. Each day begin with a […]
2026-06-01 09:00:00
2026-06-05 18:00:00
Europe/Paris
Pasteur course Advanced Bioimage Analysis with Artificial Intelligence (AI) – 2026
Topics Both tracks of the course have a specific focus on hands-on and interactive tutorials. They are meant to be convivial and foster a collaborative atmosphere between students and teachers. Each day begin with a […]
Institut Pasteur, Rue du Docteur Roux, Paris, France
IPEMtomo 2024 – Image Processing for Electron Microscopy-Tomography course
The 4th 4 days practical course on Image Processing for Electron Microscopy focused on (Cryo-)Tomography (IPEMtomo) will be held at Institut Pasteur, Paris, November 12-15, 2024. Electron tomography combined with image processing is one […]
2024-11-12 00:00:00
2024-11-15 16:00:00
Europe/Paris
IPEMtomo 2024 – Image Processing for Electron Microscopy-Tomography course
The 4th 4 days practical course on Image Processing for Electron Microscopy focused on (Cryo-)Tomography (IPEMtomo) will be held at Institut Pasteur, Paris, November 12-15, 2024. Electron tomography combined with image processing is one […]
28 Rue du Dr Roux, Paris, France
Bioinformatics program for PhD students 2023 2024
This training program in statistics, bioinformatics and image analysis, financed by INCEPTION program, begins with a mandatory common core during which we will present all the tracks, and follow short courses on computer science, […]
Hub de Bioinformatique et Biostatistique
Hub d’Analyse d’Images
INCEPTION – INstitut Convergences pour l’étude de l’Émergence des Pathologies au Travers des Individus et des populatiONs
Centre de Ressources et Recherche en Informatique
Emeline Perthame
Emmanuelle Permal
Marvin Albert
Jean-Yves Tinevez
Victoire Baillet
Thomas Bigot
Pascal Campagne
Elodie Chapeaublanc
Claudia Chica
Anđela Davidović
Stephan Fischer
Amine Ghozlane
Julien Guglielmini
Vincent Guillemot
Elise Jacquemet
Bernd Jagla
Hanna Julienne
Julia Kende
Vincent Laville
Frédéric LEMOINE
Gaëlle Letort
Blaise Li
Yann Loe-Mie
Hélène Lopez-Maestre
Nicolas Maillet
Sébastien MELLA
Juliette Meyer
Olivier Mirabeau
Damien Mornico
Thomas Obadia
Adrien Pain
Minh-Son Phan
Natalia Pietrosemoli
Stéphane Rigaud
Violaine Saint-André
Rachel Torchet
Hugo Varet
Amaury Vaysse
Laura Xénard
2023-10-23 09:30:00
2024-06-28 17:00:00
Europe/Paris
Bioinformatics program for PhD students 2023 2024
This training program in statistics, bioinformatics and image analysis, financed by INCEPTION program, begins with a mandatory common core during which we will present all the tracks, and follow short courses on computer science, […]
25-28 Rue du Docteur Roux, Paris, France
Image Processing for Electron Microscopy – CryoTomography
The 2nd one-week practical course on Image Processing for Electron Microscopy focused on Cryo-Tomography (IPEMcryotomo) will be held at Institut Pasteur, Paris, October 3-7, 2022. Electron tomography combined with image processing is one of […]
2022-10-03 10:00:00
2022-10-07 17:00:00
Europe/Paris
Image Processing for Electron Microscopy – CryoTomography
The 2nd one-week practical course on Image Processing for Electron Microscopy focused on Cryo-Tomography (IPEMcryotomo) will be held at Institut Pasteur, Paris, October 3-7, 2022. Electron tomography combined with image processing is one of […]
25 Rue du Dr Roux, Paris, France
Bioinformatics program for PhD students 2022-2023
This training program in statistics, bioinformatics and image analysis begins with a mandatory common core during which we will present all the tracks, and follow short courses on computer science, reproducible research, experimental design […]
Hub de Bioinformatique et Biostatistique
Hub d’Analyse d’Images
INCEPTION – INstitut Convergences pour l’étude de l’Émergence des Pathologies au Travers des Individus et des populatiONs
Centre de Ressources et Recherche en Informatique
Emmanuelle Permal
Emeline Perthame
Jean-Yves Tinevez
Blaise Li
Sébastien MELLA
Anđela Davidović
Pascal Campagne
Thomas Obadia
Elise Jacquemet
Violaine Saint-André
Hanna Julienne
Thomas Bigot
Frédéric LEMOINE
Nicolas Maillet
Claudia Chica
Julien Guglielmini
Vincent Guillemot
Bernd Jagla
Vincent Laville
Benoît Lelandais
Gaëlle Letort
Yann Loe-Mie
Hélène Lopez-Maestre
Olivier Mirabeau
Damien Mornico
Adrien Pain
Natalia Pietrosemoli
Stéphane Rigaud
Hugo Varet
Amaury Vaysse
Minh-Son Phan
Marvin Albert
2022-10-21 09:30:00
2023-06-30 18:00:00
Europe/Paris
Bioinformatics program for PhD students 2022-2023
This training program in statistics, bioinformatics and image analysis begins with a mandatory common core during which we will present all the tracks, and follow short courses on computer science, reproducible research, experimental design […]
25-28 Rue du Docteur Roux, Paris, France
Bioinformatics program for PhD students 2020-2021
This mandatory training program, required for all Institut Pasteur PhD students, begins with a group of common core courses including a knowledge base in reproducible research, R Programming and Statistics. Each student then can […]
Hub d’Analyse d’Images
Hub de Bioinformatique et Biostatistique
INCEPTION – INstitut Convergences pour l’étude de l’Émergence des Pathologies au Travers des Individus et des populatiONs
Biologie Computationnelle
Centre de Ressources et Recherches Technologiques
Vincent Guillemot
Jean-Yves Tinevez
Marie-Agnès Dillies
Frédéric LEMOINE
Nicolas Maillet
Blaise Li
Stevenn Volant
Pascal Campagne
Hugo Varet
Hanna Julienne
Violaine Saint-André
Julien Guglielmini
Thomas Bigot
Quentin Giai Gianetto
Claudia Chica
Rachel Legendre
Adrien Pain
Natalia Pietrosemoli
Emeline Perthame
Stéphane Rigaud
Benoît Lelandais
Sébastien MELLA
Anđela Davidović
Thomas Obadia
Véronique Hourdel
Amine Ghozlane
Alexis Criscuolo
Amaury Vaysse
2020-10-15 09:30:00
2021-06-03 17:00:00
Europe/Paris
Bioinformatics program for PhD students 2020-2021
This mandatory training program, required for all Institut Pasteur PhD students, begins with a group of common core courses including a knowledge base in reproducible research, R Programming and Statistics. Each student then can […]
25-28 Rue du Dr Roux, 75015 Paris, France
Publications
Télécharger-
2025F-BIAS: Towards a distributed national core facility for bioimage analysis., PLoS Comput Biol 2025 Jun; 21(6): e1013058.
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2023SCRIB controls apical contractility during epithelial differentiation., J Cell Biol 2023 Dec; 222(12): .
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2023Antagonism of ALAS1 by the Measles Virus V protein contributes to degradation of the mitochondrial network and promotes interferon response., PLoS Pathog 2023 Feb; 19(2): e1011170.
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2022TrackMate 7: integrating state-of-the-art segmentation algorithms into tracking pipelines., Nat Methods 2022 Jun; (): .
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2022Mechanical feedback defines organizing centers to drive digit emergence., Dev Cell 2022 Apr; 57(7): 854-866.e6.
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2021Herpes Simplex Virus Type 1 Infection Disturbs the Mitochondrial Network, Leading to Type I Interferon Production through the RNA Polymerase III/RIG-I Pathway., mBio 2021 Dec; 12(6): e0255721.
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2021SARS-CoV-2 infection induces the dedifferentiation of multiciliated cells and impairs mucociliary clearance., Nat Commun 2021 Jul; 12(1): 4354.