Timeline
Alexandre Alanio
Permanent Researcher
29 Mar 2024
publication
Features of cryptococcosis among 652 HIV-seronegative individuals in France: a cross-sectional observational study (2005-2020).
Read more30 Nov 2023
publication
Kicking sleepers out of bed: Macrophages promote reactivation of dormant Cryptococcus neoformans by extracellular vesicle release and non-lytic exocytosis.
Read more31 Aug 2023
news
Congratulation to Aude Sturny-Leclère and her colleagues for obtaining an ANRS Clinical Project Grant
Read more01 Aug 2023
publication
Invasive fungal diseases in patients with autoimmune diseases: a case series from the French RESSIF network.
Read more13 Jun 2023
publication
Coregulation of extracellular vesicle production and fluconazole susceptibility in Cryptococcus neoformans
Read more02 Jan 2023
12 Sep 2022
publication
First Patient-to-Patient Intrahospital Transmission of Clade I Candida auris in France Revealed after a Two-Month Incubation Period.
Read more27 Jul 2022
publication
Analytical Performance of the Commercial MucorGenius® Assay as Compared to an In-House qPCR Assay to Detect Mucorales DNA in Serum Specimens.
Read more14 Feb 2022
news
Congratulation to Aude Sturny-Leclère and colleagues for being granted a Contrat d’initiation by the ANRS for their project “Evaluation of new tools for the diagnostic of histoplasmosis”
Read more25 Jan 2022
news
Highlighted Publication: “Combination of mycological criteria: a better surrogate to identify COVID-19 associated pulmonary aspergillosis patients and evaluate prognosis?” Dellière et al., J. Clin Microbiol, Molecular Mycology team
Read more05 Jan 2022
publication
Combination of mycological criteria: a better surrogate to identify COVID-19 associated pulmonary aspergillosis patients and evaluate prognosis?
Read more20 Oct 2021
publication
COVID-19-Associated Pulmonary Aspergillosis, Fungemia, and Pneumocystosis in the Intensive Care Unit: a Retrospective Multicenter Observational Cohort during the First French Pandemic Wave.
Read more14 Sep 2021
26 Jul 2021
news
ANR PRC call : Congratulations to Guilhem Janbon, Iuliana Ene and Alexandre Alanio for their successful project proposal “ResistEV”
Read more22 May 2021
publication
Different repartition of the cryptic species of black aspergilli according to the anatomical sites in human infections, in a French University hospital.
Read more20 Apr 2021
publication
Prospective comparison of (1,3)-beta-D-glucan detection using colorimetric and turbidimetric assays for diagnosing invasive fungal disease.
Read more09 Mar 2021
06 Jan 2021
publication
Cerebral histoplasmosis caused by Histoplasma capsulatum var. duboisii in a patient with no known immunodeficiency.
Read more13 Dec 2020
publication
Risk factors associated with COVID-19-associated pulmonary aspergillosis in ICU patients: a French multicentric retrospective cohort.
Read more07 Dec 2020
18 Aug 2020
publication
Correlation Between Pneumocystis jirovecii Mitochondrial Genotypes and High and Low Fungal Loads Assessed by Single Nucleotide Primer Extension Assay and Quantitative Real-Time PCR.
Read more18 Aug 2020
publication
Clinical, Diagnostic, and Treatment Disparities between HIV-Infected and Non-HIV-Infected Immunocompromised Patients with Pneumocystis jirovecii Pneumonia.
Read more05 Aug 2020
publication
Entamoeba histolytica DNA Detection in Serum of Suspected Amoebic Liver Abscess.
Read more01 Aug 2020
publication
Failure of multiplex meningitis/encephalitis (ME) NAT during cryptococcal meningitis in solid organ recipients.
Read more01 Aug 2020
01 Aug 2020
publication
The Fungal PCR Initiative’s evaluation of in-house and commercial Pneumocystis jirovecii qPCR assays: Toward a standard for a diagnostics assay.
Read more23 Jul 2020
01 Jul 2020
13 Jun 2020
publication
Interlaboratory evaluation of Mucorales PCR assays for testing serum specimens: A study by the fungal PCR Initiative and the Modimucor study group.
Read more01 Jun 2020
publication
Prevalence of putative invasive pulmonary aspergillosis in critically ill patients with COVID-19.
Read more01 Jun 2020
publication
Outcome and characteristics of invasive fungal infections in critically ill burn patients: A multicenter retrospective study.
Read more28 Apr 2020
publication
Tracing the Evolutionary History and Global Expansion of Candida auris Using Population Genomic Analyses.
Read more01 Apr 2020
publication
Aspergillus flavus malignant external otitis in a diabetic patient: case report and literature review.
Read more10 Mar 2020
01 Feb 2020
publication
Emerging mould infections: Get prepared to meet unexpected fungi in your patient
Read more01 Jan 2020
publication
Time to and differential time to blood culture positivity for assessing catheter-related yeast fungaemia: A longitudinal, 7-year study in a single university hospital.
Read more01 Jan 2020
publication
Comparison of MultiLocus Sequence Typing (MLST) and Microsatellite Length Polymorphism (MLP) for Pneumocystis jirovecii genotyping.
Read more26 Dec 2019
publication
Quantification of Pneumocystis jirovecii: Cross-Platform Comparison of One qPCR Assay with Leading Platforms and Six Master Mixes.
Read more23 Dec 2019
publication
Correction for Cornu et al., “Evaluation of Mass Spectrometry-Based Detection of Panfungal Serum Disaccharide for Diagnosis of Invasive Fungal Infections: Results from a Collaborative Study Involving Six European Clinical Centers”.
Read more01 Dec 2019
publication
Global guideline for the diagnosis and management of mucormycosis: an initiative of the European Confederation of Medical Mycology in cooperation with the Mycoses Study Group Education and Research Consortium.
Read more28 Nov 2019
31 Oct 2019
01 Oct 2019
publication
ECMM CandiReg-A ready to use platform for outbreaks and epidemiological studies.
Read more01 Oct 2019
publication
Anti-fungal activity of a novel triazole, PC1244, against emerging azole-resistant Aspergillus fumigatus and other species of Aspergillus.
Read more01 Sep 2019
publication
A comprehensive assessment of demographic, environmental, and host genetic associations with gut microbiome diversity in healthy individuals.
Read more07 Aug 2019
publication
Intranasal Inoculation of Cryptococcus neoformans in Mice Produces Nasal Infection with Rapid Brain Dissemination.
Read more01 Aug 2019
01 Jul 2019
publication
Cryptococcus neoformans resists to drastic conditions by switching to viable but non-culturable cell phenotype.
Read more01 Jun 2019
publication
Development and validation of the European QUALity (EQUAL) score for mucormycosis management in haematology.
Read more01 May 2019
publication
Evaluation of Mass Spectrometry-Based Detection of Panfungal Serum Disaccharide for Diagnosis of Invasive Fungal Infections: Results from a Collaborative Study Involving Six European Clinical Centers.
Read more01 Apr 2019
publication
Primary antifungal prophylaxis with micafungin after allogeneic hematopoietic stem cell transplantation: a monocentric prospective study.
Read more01 Apr 2019
01 Mar 2019
publication
Outcome and potentially modifiable risk factors for candidemia in critically ill burns patients: A matched cohort study.
Read more07 Feb 2019
07 Feb 2019
23 Jan 2019
project
CryptoVIEW: Unraveling pathogenesis of Cryptococcosis using optical and multimodal visualizaion of enigmatic events and virulence aspects in vivo.
Read more14 Jan 2019
publication
Correction to: AMBIsome Therapy Induction OptimisatioN (AMBITION): High Dose AmBisome for Cryptococcal Meningitis Induction Therapy in sub-Saharan Africa: Study Protocol for a Phase 3 Randomised Controlled Non-Inferiority Trial.
Read more01 Jan 2019
01 Dec 2018
23 Nov 2018
publication
AMBIsome Therapy Induction OptimisatioN (AMBITION): High Dose AmBisome for Cryptococcal Meningitis Induction Therapy in sub-Saharan Africa: Study Protocol for a Phase 3 Randomised Controlled Non-Inferiority Trial.
Read more01 Nov 2018
publication
Global guidelines and initiatives from the European Confederation of Medical Mycology to improve patient care and research worldwide: New leadership is about working together.
Read more05 Sep 2018
publication
Human thymopoiesis is influenced by a common genetic variant within the TCRA-TCRD locus.
Read more27 Jul 2018
publication
Human genetic variants and age are the strongest predictors of humoral immune responses to common pathogens and vaccines.
Read more12 Jul 2018
publication
Failure of voriconazole therapy due to acquired azole resistance in Aspergillus fumigatus in a kidney transplant recipient with chronic necrotizing aspergillosis.
Read more07 May 2018
01 May 2018
publication
In Vitro and In Vivo Efficacy of a Novel and Long-Acting Fungicidal Azole, PC1244, on Aspergillus fumigatus Infection.
Read more01 May 2018
publication
Titan cells formation in Cryptococcus neoformans is finely tuned by environmental conditions and modulated by positive and negative genetic regulators.
Read more24 Apr 2018
publication
Outbreak of Invasive Wound Mucormycosis in a Burn Unit Due to Multiple Strains of Mucor circinelloides f. circinelloides Resolved by Whole-Genome Sequencing.
Read more01 Mar 2018
publication
Natural variation in the parameters of innate immune cells is preferentially driven by genetic factors.
Read more01 Jan 2018
01 Jan 2018
publication
Continuous Decline of Toxoplasma gondii Seroprevalence in Hospital: A 1997-2014 Longitudinal Study in Paris, France.
Read more01 Jan 2018
01 Jan 2018
publication
Corrigendum: Continuous Decline of Toxoplasma gondii Seroprevalence in Hospital: A 1997-2014 Longitudinal Study in Paris, France.
Read more01 Dec 2017
publication
Fungal infections in patients treated with ibrutinib: two unusual cases of invasive aspergillosis and cryptococcal meningoencephalitis.
Read more01 Nov 2017
publication
A cell impedance-based real-time in vitro assay to assess the toxicity of amphotericin B formulations.
Read more01 Sep 2017
publication
Tracing Genetic Exchange and Biogeography of Cryptococcus neoformans var. grubii at the Global Population Level.
Read more30 Aug 2017
publication
Hepatitis E virus-induced primary cutaneous CD30(+) T cell lymphoproliferative disorder.
Read more01 Aug 2017
publication
Diversity of Pneumocystis jirovecii Across Europe: A Multicentre Observational Study.
Read more01 Jul 2017
publication
Continuous increase of Trichophyton tonsurans as a cause of tinea capitis in the urban area of Paris, France: a 5-year-long study.
Read more01 Jul 2017
publication
Investigating Clinical Issues by Genotyping of Medically Important Fungi: Why and How?
Read more01 Jun 2017
01 May 2017
publication
In Vitro and In Vivo Antifungal Profile of a Novel and Long-Acting Inhaled Azole, PC945, on Aspergillus fumigatus Infection.
Read more01 Apr 2017
publication
Pneumocystis jirovecii pneumonia: still a concern in patients with haematological malignancies and stem cell transplant recipients-authors’ response.
Read more01 Mar 2017
01 Jan 2017
publication
Circulating Aspergillus fumigatus DNA Is Quantitatively Correlated to Galactomannan in Serum.
Read more01 Jan 2017
publication
Molecular Demonstration of a Pneumocystis Outbreak in Stem Cell Transplant Patients: Evidence for Transmission in the Daycare Center.
Read more01 Jan 2017
01 Jan 2017
publication
Pneumocystis jirovecii detection in asymptomatic patients: what does its natural history tell us?
Read more01 Jan 2017
15 Nov 2016
publication
Detection of Circulating Mucorales DNA in Critically Ill Burn Patients: Preliminary Report of a Screening Strategy for Early Diagnosis and Treatment.
Read more01 Sep 2016
publication
Early diagnosis and monitoring of mucormycosis by detection of circulating DNA in serum: retrospective analysis of 44 cases collected through the French Surveillance Network of Invasive Fungal Infections (RESSIF).
Read more01 Sep 2016
publication
ECIL guidelines for preventing Pneumocystis jirovecii pneumonia in patients with haematological malignancies and stem cell transplant recipients.
Read more01 Sep 2016
publication
ECIL guidelines for the diagnosis of Pneumocystis jirovecii pneumonia in patients with haematological malignancies and stem cell transplant recipients.
Read more01 Sep 2016
publication
Pneumocystis jirovecii pneumonia: still a concern in patients with haematological malignancies and stem cell transplant recipients.
Read more01 Aug 2016
publication
New therapeutic strategies for invasive aspergillosis in the era of azole resistance: how should the prevalence of azole resistance be defined?
Read more01 Aug 2016
publication
Variation in copy number of the 28S rDNA of Aspergillus fumigatus measured by droplet digital PCR and analog quantitative real-time PCR.
Read more01 Aug 2016
publication
[Sinonasal fungal infections are not exclusively due to mucorales and Aspergillus!].
Read more01 May 2016
publication
Aspergillus spp. invasive external otitis: favourable outcome with a medical approach.
Read more16 Apr 2016
publication
Seroprevalence of Toxoplasma gondii and direct genotyping using minisequencing in free-range pigs in Burkina Faso.
Read more13 Jan 2016
publication
Treatment with adalimumab for severe immune reconstitution inflammatory syndrome in an HIV-infected patient presenting with cryptococcal meningitis.
Read more01 Jan 2016
publication
Azole Resistance of Aspergillus fumigatus in Immunocompromised Patients with Invasive Aspergillosis
Read more01 Jan 2016
publication
Diversity of Pneumocystis jirovecii during Infection Revealed by Ultra-Deep Pyrosequencing.
Read more01 Jan 2016
publication
Fluconazole and Echinocandin Resistance of Candida glabrata Correlates Better with Antifungal Drug Exposure Rather than with MSH2 Mutator Genotype in a French Cohort of Patients Harboring Low Rates of Resistance.
Read more01 Jan 2016
publication
Copy Number Variation of Mitochondrial DNA Genes in Pneumocystis jirovecii According to the Fungal Load in BAL Specimens.
Read more01 Dec 2015
01 Dec 2015
publication
[Cryptococcus where they are not expected: Five case reports of extra-cerebral and extra-pulmonary cryptococcosis].
Read more15 Oct 2015
publication
Whole genome sequencing to investigate an outbreak of mucormycosis in a burn unit
Read more01 Oct 2015
01 Sep 2015
publication
High diversity of non-sporulating moulds in respiratory specimens of immunocompromised patients: should all the species be reported when diagnosing invasive aspergillosis?
Read more31 Aug 2015
publication
Épidémie de mucormycose dans un centre de traitement des brûlés : des biomarqueurs diagnostiques au séquençage complets des souches
Read more14 Jul 2015
14 Jul 2015
01 Jun 2015
publication
Molecular identification of Mucorales in human tissues: contribution of PCR electrospray-ionization mass spectrometry.
Read more22 Apr 2015
publication
Dual Invasive Infection with Phaeoacremonium parasiticum and Paraconiothyrium cyclothyrioides in a Renal Transplant Recipient: Case Report and Comprehensive Review of the Literature of Phaeoacremonium Phaeohyphomycosis.
Read more01 Apr 2015
publication
The Milieu Intérieur study – an integrative approach for study of human immunological variance.
Read more01 Apr 2015
publication
Utility of adding Pneumocystis jirovecii DNA detection in nasopharyngeal aspirates in immunocompromised adult patients with febrile pneumonia.
Read more31 Mar 2015
publication
Cryptococcus neoformans host adaptation: toward biological evidence of dormancy
Read more24 Mar 2015
publication
Muscle diffusion of liposomal amphotericin B and posaconazole in critically ill burn patients receiving continuous hemodialysis
Read more06 Mar 2015
publication
Combined medico-surgical strategy for invasive sino-orbito-cerebral breakthrough fungal infection with Hormographiella aspergillata in an acute leukaemia patient
Read more01 Jan 2015
publication
New Short Tandem Repeat-Based Molecular Typing Method for Pneumocystis jirovecii Reveals Intrahospital Transmission between Patients from Different Wards.
Read more01 Jan 2015
publication
Importance of operational factors in the reproducibility of Aspergillus galactomannan enzyme immune assay.
Read more01 Nov 2014
01 Jun 2014
publication
Difficulties with molecular diagnostic tests for mould and yeast infections: where do we stand?
Read more01 Jun 2014
publication
Misidentification of Saprochaete clavata as Magnusiomyces capitatus in clinical isolates: utility of internal transcribed spacer sequencing and matrix-assisted laser desorption ionization-time of flight mass spectrometry and importance of reliable databases.
Read more10 May 2014
publication
Iterative breakthrough invasive aspergillosis due to TR(34) /L98H azole-resistant Aspergillus fumigatus and Emericella sublata in a single hematopoietic stem cell transplant patient
Read more28 Jan 2014
publication
Antifungal pre-emptive strategy for high-risk neutropenic patients: why the story is still ongoing
Read more19 Nov 2013
publication
Direct genotyping of Toxoplasma gondii from amniotic fluids based on B1 gene polymorphism using minisequencing analysis.
Read more18 Jun 2012
21 May 2012
publication
In vitro combination of anidulafungin and voriconazole against intrinsically azole-susceptible and -resistant Aspergillus spp
Read more01 May 2011
publication
Matrix-assisted laser desorption ionization time-of-flight mass spectrometry for fast and accurate identification of clinically relevant Aspergillus species
Read more12 Apr 2011
publication
Real-time PCR assay-based strategy for differentiation between active Pneumocystis jirovecii pneumonia and colonization in immunocompromised patients
Read more01 Jan 2011
publication
Dynamics of Cryptococcus neoformans-macrophage interactions reveal that fungal background influences outcome during cryptococcal meningoencephalitis in humans.
Read more05 Dec 2010
publication
Low prevalence of resistance to azoles in Aspergillus fumigatus in a French cohort of patients treated for haematological malignancies.
Read more25 Jul 2010
publication
Microsporum praecox: molecular identification of a new case and review of the literature.
Read more17 Mar 2010
publication
Real-time identification of bacteria and Candida species in positive blood culture broths by matrix-assisted laser desorption ionization-time of flight mass spectrometry.
Read more01 Oct 2009
publication
MALDI-TOF MS-based drug susceptibility testing of pathogens: the example of Candida albicans and fluconazole
Read more15 May 2008
publication