Ligne de temps

Alexandre Alanio
Chercheur(euse) Permanent(e)
14 Feb 2022
news

Congratulation to Aude Sturny-Leclère and colleagues for being granted a Contrat d’initiation by the ANRS for their project “Evaluation of new tools for the diagnostic of histoplasmosis”

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25 Jan 2022
news

Highlighted Publication: “Combination of mycological criteria: a better surrogate to identify COVID-19 associated pulmonary aspergillosis patients and evaluate prognosis?” Dellière et al., J. Clin Microbiol, Molecular Mycology team

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05 Jan 2022
publication

Combination of mycological criteria: a better surrogate to identify COVID-19 associated pulmonary aspergillosis patients and evaluate prognosis?

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20 Oct 2021
publication

COVID-19-Associated Pulmonary Aspergillosis, Fungemia, and Pneumocystosis in the Intensive Care Unit: a Retrospective Multicenter Observational Cohort during the First French Pandemic Wave.

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14 Sep 2021
course

MOOC Medical Mycology

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26 Jul 2021
news

ANR PRC call : Congratulations to Guilhem Janbon, Iuliana Ene and Alexandre Alanio for their successful project proposal “ResistEV”

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22 May 2021
publication

Different repartition of the cryptic species of black aspergilli according to the anatomical sites in human infections, in a French University hospital.

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20 Apr 2021
publication

Prospective comparison of (1,3)-beta-D-glucan detection using colorimetric and turbidimetric assays for diagnosing invasive fungal disease.

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09 Mar 2021
publication

Evaluation of a New Histoplasma spp. Quantitative RT-PCR Assay.

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06 Jan 2021
publication

Cerebral histoplasmosis caused by Histoplasma capsulatum var. duboisii in a patient with no known immunodeficiency.

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13 Dec 2020
publication

Risk factors associated with COVID-19-associated pulmonary aspergillosis in ICU patients: a French multicentric retrospective cohort.

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07 Dec 2020
publication

Fungal infections should be part of the core outcome set for COVID-19.

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18 Aug 2020
publication

Correlation Between Pneumocystis jirovecii Mitochondrial Genotypes and High and Low Fungal Loads Assessed by Single Nucleotide Primer Extension Assay and Quantitative Real-Time PCR.

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18 Aug 2020
publication

Clinical, Diagnostic, and Treatment Disparities between HIV-Infected and Non-HIV-Infected Immunocompromised Patients with Pneumocystis jirovecii Pneumonia.

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05 Aug 2020
publication

Entamoeba histolytica DNA Detection in Serum of Suspected Amoebic Liver Abscess.

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01 Aug 2020
publication

The Fungal PCR Initiative’s evaluation of in-house and commercial Pneumocystis jirovecii qPCR assays: Toward a standard for a diagnostics assay.

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01 Aug 2020
publication

Failure of multiplex meningitis/encephalitis (ME) NAT during cryptococcal meningitis in solid organ recipients.

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01 Aug 2020
publication

Deep cutaneous fungal infections in solid-organ transplant recipients.

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23 Jul 2020
publication

Evaluation of the COVID-19 IgG/IgM Rapid Test from Orient Gene Biotech.

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01 Jul 2020
publication

Dormancy in Cryptococcus neoformans: 60 years of accumulating evidence.

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13 Jun 2020
publication

Interlaboratory evaluation of Mucorales PCR assays for testing serum specimens: A study by the fungal PCR Initiative and the Modimucor study group.

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01 Jun 2020
publication

Prevalence of putative invasive pulmonary aspergillosis in critically ill patients with COVID-19.

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01 Jun 2020
publication

Outcome and characteristics of invasive fungal infections in critically ill burn patients: A multicenter retrospective study.

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28 Apr 2020
publication

Tracing the Evolutionary History and Global Expansion of Candida auris Using Population Genomic Analyses.

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01 Apr 2020
publication

Aspergillus flavus malignant external otitis in a diabetic patient: case report and literature review.

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10 Mar 2020
publication

Tracking a Global Threat: a New Genotyping Method for Candida auris.

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01 Feb 2020
publication

Emerging mould infections: Get prepared to meet unexpected fungi in your patient.

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01 Jan 2020
publication

Time to and differential time to blood culture positivity for assessing catheter-related yeast fungaemia: A longitudinal, 7-year study in a single university hospital.

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01 Jan 2020
publication

Comparison of MultiLocus Sequence Typing (MLST) and Microsatellite Length Polymorphism (MLP) for Pneumocystis jirovecii genotyping.

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26 Dec 2019
publication

Quantification of Pneumocystis jirovecii: Cross-Platform Comparison of One qPCR Assay with Leading Platforms and Six Master Mixes.

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23 Dec 2019
publication

Correction for Cornu et al., “Evaluation of Mass Spectrometry-Based Detection of Panfungal Serum Disaccharide for Diagnosis of Invasive Fungal Infections: Results from a Collaborative Study Involving Six European Clinical Centers”.

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01 Dec 2019
publication

Global guideline for the diagnosis and management of mucormycosis: an initiative of the European Confederation of Medical Mycology in cooperation with the Mycoses Study Group Education and Research Consortium.

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28 Nov 2019
publication

Outbreak-Causing Fungi: Pneumocystis jirovecii.

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31 Oct 2019
publication

New Insights Into Cryptococcus Spp. Biology and Cryptococcal Meningitis.

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01 Oct 2019
publication

ECMM CandiReg-A ready to use platform for outbreaks and epidemiological studies.

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01 Oct 2019
publication

Anti-fungal activity of a novel triazole, PC1244, against emerging azole-resistant Aspergillus fumigatus and other species of Aspergillus.

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01 Sep 2019
publication

A comprehensive assessment of demographic, environmental, and host genetic associations with gut microbiome diversity in healthy individuals.

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07 Aug 2019
publication

Intranasal Inoculation of Cryptococcus neoformans in Mice Produces Nasal Infection with Rapid Brain Dissemination.

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01 Aug 2019
publication

The enigmatic role of fungal annexins: the case of Cryptococcus neoformans.

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01 Jul 2019
publication

Cryptococcus neoformans resists to drastic conditions by switching to viable but non-culturable cell phenotype.

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01 Jun 2019
publication

Development and validation of the European QUALity (EQUAL) score for mucormycosis management in haematology.

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01 May 2019
publication

Evaluation of Mass Spectrometry-Based Detection of Panfungal Serum Disaccharide for Diagnosis of Invasive Fungal Infections: Results from a Collaborative Study Involving Six European Clinical Centers.

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01 Apr 2019
publication

Primary antifungal prophylaxis with micafungin after allogeneic hematopoietic stem cell transplantation: a monocentric prospective study.

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01 Apr 2019
publication

Why are so many cases of invasive aspergillosis missed?

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01 Mar 2019
publication

Outcome and potentially modifiable risk factors for candidemia in critically ill burns patients: A matched cohort study.

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07 Feb 2019
project

Improve molecular methods to detect Histoplasma capsulatum in humans

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07 Feb 2019
project

Understanding the genesis of the Titan cells in Cryptococcus neoformans

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23 Jan 2019
project

Molecular variability of Pneumocystis jirovecii: from genotype to antigenic variability

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23 Jan 2019
project

CryptoVIEW: Unraveling pathogenesis of Cryptococcosis using optical and multimodal visualizaion of enigmatic events and virulence aspects in vivo.

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14 Jan 2019
publication

Correction to: AMBIsome Therapy Induction OptimisatioN (AMBITION): High Dose AmBisome for Cryptococcal Meningitis Induction Therapy in sub-Saharan Africa: Study Protocol for a Phase 3 Randomised Controlled Non-Inferiority Trial.

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01 Jan 2019
publication

Recent advances in managing HIV-associated cryptococcal meningitis.

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01 Dec 2018
publication

Reactivation of dormant/latent fungal infection.

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23 Nov 2018
publication

AMBIsome Therapy Induction OptimisatioN (AMBITION): High Dose AmBisome for Cryptococcal Meningitis Induction Therapy in sub-Saharan Africa: Study Protocol for a Phase 3 Randomised Controlled Non-Inferiority Trial.

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01 Nov 2018
publication

Global guidelines and initiatives from the European Confederation of Medical Mycology to improve patient care and research worldwide: New leadership is about working together.

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05 Sep 2018
publication

Human thymopoiesis is influenced by a common genetic variant within the TCRA-TCRD locus.

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12 Jul 2018
publication

Failure of voriconazole therapy due to acquired azole resistance in Aspergillus fumigatus in a kidney transplant recipient with chronic necrotizing aspergillosis.

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04 Jul 2018
course

Medical Mycology Course in Africa

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01 Jul 2018
publication

Human genetic variants and age are the strongest predictors of humoral immune responses to common pathogens and vaccines.

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07 May 2018
publication

Diagnostic and therapeutic strategies in cryptococcosis: impact on outcome.

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01 May 2018
publication

In Vitro and In Vivo Efficacy of a Novel and Long-Acting Fungicidal Azole, PC1244, on Aspergillus fumigatus Infection.

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01 May 2018
publication

Titan cells formation in Cryptococcus neoformans is finely tuned by environmental conditions and modulated by positive and negative genetic regulators.

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24 Apr 2018
publication

Outbreak of Invasive Wound Mucormycosis in a Burn Unit Due to Multiple Strains of Mucor circinelloides f. circinelloides Resolved by Whole-Genome Sequencing.

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01 Mar 2018
publication

Natural variation in the parameters of innate immune cells is preferentially driven by genetic factors.

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01 Jan 2018
publication

Recent advances in the understanding and management of mucormycosis.

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01 Jan 2018
publication

Corrigendum: Continuous Decline of Toxoplasma gondii Seroprevalence in Hospital: A 1997-2014 Longitudinal Study in Paris, France.

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01 Jan 2018
publication

Mechanisms of Cryptococcus neoformans-Mediated Host Damage.

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01 Jan 2018
publication

Continuous Decline of Toxoplasma gondii Seroprevalence in Hospital: A 1997-2014 Longitudinal Study in Paris, France.

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01 Dec 2017
publication

Fungal infections in patients treated with ibrutinib: two unusual cases of invasive aspergillosis and cryptococcal meningoencephalitis.

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01 Nov 2017
publication

A cell impedance-based real-time in vitro assay to assess the toxicity of amphotericin B formulations.

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01 Sep 2017
publication

Tracing Genetic Exchange and Biogeography of Cryptococcus neoformans var. grubii at the Global Population Level.

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30 Aug 2017
publication

Hepatitis E virus-induced primary cutaneous CD30(+) T cell lymphoproliferative disorder.

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01 Aug 2017
publication

Diversity of Pneumocystis jirovecii Across Europe: A Multicentre Observational Study.

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30 Jul 2017
publication

Investigating Clinical Issues by Genotyping of Medically Important Fungi: Why and How?

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28 Jul 2017
project

AMBITION-cm

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01 Jul 2017
publication

Continuous increase of Trichophyton tonsurans as a cause of tinea capitis in the urban area of Paris, France: a 5-year-long study.

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01 Jun 2017
publication

[Fungal sinusitis].

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01 May 2017
publication

In Vitro and In Vivo Antifungal Profile of a Novel and Long-Acting Inhaled Azole, PC945, on Aspergillus fumigatus Infection.

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01 Apr 2017
publication

Pneumocystis jirovecii pneumonia: still a concern in patients with haematological malignancies and stem cell transplant recipients-authors’ response.

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01 Mar 2017
project

Deciphering dormancy in Cryptocococcus neoformans

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01 Jan 2017
publication

Circulating Aspergillus fumigatus DNA Is Quantitatively Correlated to Galactomannan in Serum.

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01 Jan 2017
publication

Molecular Demonstration of a Pneumocystis Outbreak in Stem Cell Transplant Patients: Evidence for Transmission in the Daycare Center.

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01 Jan 2017
publication

Challenges in microbiological diagnosis of invasive Aspergillus infections.

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01 Jan 2017
publication

Pneumocystis jirovecii detection in asymptomatic patients: what does its natural history tell us?

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01 Jan 2017
publication

Performance evaluation of multiplex PCR including Aspergillus-not so simple!

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21 Nov 2016
project

Communauté des médecins affiliés de l’Institut Pasteur

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15 Nov 2016
publication

Detection of Circulating Mucorales DNA in Critically Ill Burn Patients: Preliminary Report of a Screening Strategy for Early Diagnosis and Treatment.

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01 Sep 2016
publication

Early diagnosis and monitoring of mucormycosis by detection of circulating DNA in serum: retrospective analysis of 44 cases collected through the French Surveillance Network of Invasive Fungal Infections (RESSIF).

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01 Sep 2016
publication

ECIL guidelines for preventing Pneumocystis jirovecii pneumonia in patients with haematological malignancies and stem cell transplant recipients.

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01 Sep 2016
publication

ECIL guidelines for the diagnosis of Pneumocystis jirovecii pneumonia in patients with haematological malignancies and stem cell transplant recipients.

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01 Sep 2016
publication

Pneumocystis jirovecii pneumonia: still a concern in patients with haematological malignancies and stem cell transplant recipients.

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01 Aug 2016
publication

[Sinonasal fungal infections are not exclusively due to mucorales and Aspergillus!].

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01 Aug 2016
publication

New therapeutic strategies for invasive aspergillosis in the era of azole resistance: how should the prevalence of azole resistance be defined?

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01 Aug 2016
publication

Variation in copy number of the 28S rDNA of Aspergillus fumigatus measured by droplet digital PCR and analog quantitative real-time PCR.

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01 May 2016
publication

Aspergillus spp. invasive external otitis: favourable outcome with a medical approach.

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16 Apr 2016
publication

Seroprevalence of Toxoplasma gondii and direct genotyping using minisequencing in free-range pigs in Burkina Faso.

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13 Jan 2016
publication

Treatment with adalimumab for severe immune reconstitution inflammatory syndrome in an HIV-infected patient presenting with cryptococcal meningitis.

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01 Jan 2016
publication

Azole Resistance of Aspergillus fumigatus in Immunocompromised Patients with Invasive Aspergillosis

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01 Jan 2016
publication

Diversity of Pneumocystis jirovecii during Infection Revealed by Ultra-Deep Pyrosequencing.

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01 Jan 2016
publication

Fluconazole and Echinocandin Resistance of Candida glabrata Correlates Better with Antifungal Drug Exposure Rather than with MSH2 Mutator Genotype in a French Cohort of Patients Harboring Low Rates of Resistance.

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01 Jan 2016
publication

Copy Number Variation of Mitochondrial DNA Genes in Pneumocystis jirovecii According to the Fungal Load in BAL Specimens.

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01 Dec 2015
publication

[Cryptococcus where they are not expected: Five case reports of extra-cerebral and extra-pulmonary cryptococcosis].

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01 Dec 2015
publication

[NEW STRATEGIES FOR THE MICROBIOLOGICAL DIAGNOSIS OF VISCERAL MYCOSES]

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15 Oct 2015
publication

Whole genome sequencing to investigate an outbreak of mucormycosis in a burn unit

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01 Oct 2015
publication

Mucormycosis: New Developments into a Persistently Devastating Infection.

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01 Sep 2015
publication

High diversity of non-sporulating moulds in respiratory specimens of immunocompromised patients: should all the species be reported when diagnosing invasive aspergillosis?

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31 Aug 2015
publication

Épidémie de mucormycose dans un centre de traitement des brûlés : des biomarqueurs diagnostiques au séquençage complets des souches

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14 Jul 2015
tool

Databases on the epidemiology of invasive fungal infections in France

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14 Jul 2015
nrc

Mycoses Invasives et Antifongiques

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14 Jun 2015
project

Epidemiological studies on invasive fungal infections

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01 Jun 2015
publication

Molecular identification of Mucorales in human tissues: contribution of PCR electrospray-ionization mass spectrometry.

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11 May 2015
team

Mycologie Moléculaire

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22 Apr 2015
publication

Dual Invasive Infection with Phaeoacremonium parasiticum and Paraconiothyrium cyclothyrioides in a Renal Transplant Recipient: Case Report and Comprehensive Review of the Literature of Phaeoacremonium Phaeohyphomycosis.

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01 Apr 2015
publication

Utility of adding Pneumocystis jirovecii DNA detection in nasopharyngeal aspirates in immunocompromised adult patients with febrile pneumonia.

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01 Apr 2015
publication

The Milieu Intérieur study – an integrative approach for study of human immunological variance.

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31 Mar 2015
publication

Cryptococcus neoformans host adaptation: toward biological evidence of dormancy

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24 Mar 2015
publication

Muscle diffusion of liposomal amphotericin B and posaconazole in critically ill burn patients receiving continuous hemodialysis

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06 Mar 2015
publication

Combined medico-surgical strategy for invasive sino-orbito-cerebral breakthrough fungal infection with Hormographiella aspergillata in an acute leukaemia patient

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01 Jan 2015
publication

New Short Tandem Repeat-Based Molecular Typing Method for Pneumocystis jirovecii Reveals Intrahospital Transmission between Patients from Different Wards.

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01 Jan 2015
publication

Importance of operational factors in the reproducibility of Aspergillus galactomannan enzyme immune assay.

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01 Nov 2014
publication

Mucormycosis: a new concern in the transplant ward?

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06 Aug 2014
publication

Worrisome trends in incidence and mortality of candidemia in intensive care units (Paris area, 2002-2010)

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01 Jun 2014
publication

Difficulties with molecular diagnostic tests for mould and yeast infections: where do we stand?

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01 Jun 2014
publication

Misidentification of Saprochaete clavata as Magnusiomyces capitatus in clinical isolates: utility of internal transcribed spacer sequencing and matrix-assisted laser desorption ionization-time of flight mass spectrometry and importance of reliable databases.

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10 May 2014
publication

Iterative breakthrough invasive aspergillosis due to TR(34) /L98H azole-resistant Aspergillus fumigatus and Emericella sublata in a single hematopoietic stem cell transplant patient

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28 Jan 2014
publication

Antifungal pre-emptive strategy for high-risk neutropenic patients: why the story is still ongoing

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19 Nov 2013
publication

Direct genotyping of Toxoplasma gondii from amniotic fluids based on B1 gene polymorphism using minisequencing analysis.

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18 Jun 2012
publication

Azole preexposure affects the Aspergillus fumigatus population in patients.

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21 May 2012
publication

In vitro combination of anidulafungin and voriconazole against intrinsically azole-susceptible and -resistant Aspergillus spp

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09 Aug 2011
publication

Dynamics of Cryptococcus neoformans-macrophage interactions reveal that fungal background influences outcome during cryptococcal meningoencephalitis in humans.

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01 May 2011
publication

Matrix-assisted laser desorption ionization time-of-flight mass spectrometry for fast and accurate identification of clinically relevant Aspergillus species

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12 Apr 2011
publication

Real-time PCR assay-based strategy for differentiation between active Pneumocystis jirovecii pneumonia and colonization in immunocompromised patients

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05 Dec 2010
publication

Low prevalence of resistance to azoles in Aspergillus fumigatus in a French cohort of patients treated for haematological malignancies.

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25 Jul 2010
publication

Microsporum praecox: molecular identification of a new case and review of the literature.

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17 Mar 2010
publication

Real-time identification of bacteria and Candida species in positive blood culture broths by matrix-assisted laser desorption ionization-time of flight mass spectrometry.

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01 Oct 2009
publication

MALDI-TOF MS-based drug susceptibility testing of pathogens: the example of Candida albicans and fluconazole

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15 May 2008
publication

Invasive pulmonary infection due to Trichoderma longibrachiatum mimicking invasive Aspergillosis in a neutropenic patient successfully treated with voriconazole combined with caspofungin

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