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2024Epidemiology and prognostic factors of mucormycosis in France (2012-2022): a cross-sectional study nested in a prospective surveillance programme., Lancet Reg Health Eur 2024 Oct; 45(): 101010.
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2024Features of cryptococcosis among 652 HIV-seronegative individuals in France: a cross-sectional observational study (2005-2020)., Clin Microbiol Infect 2024 Mar; (): .
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2023Kicking sleepers out of bed: Macrophages promote reactivation of dormant Cryptococcus neoformans by extracellular vesicle release and non-lytic exocytosis., PLoS Pathog 2023 Nov; 19(11): e1011841.
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2023Invasive fungal diseases in patients with autoimmune diseases: a case series from the French RESSIF network., RMD Open 2023 Aug; 9(3): .
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2023Coregulation of extracellular vesicle production and fluconazole susceptibility in Cryptococcus neoformans, mBio, 2023, pp.e00870-23. ⟨10.1128/mbio.00870-23⟩.
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2022First Patient-to-Patient Intrahospital Transmission of Clade I Candida auris in France Revealed after a Two-Month Incubation Period., Microbiol Spectr 2022 Sep; (): e0183322.
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2022Analytical Performance of the Commercial MucorGenius® Assay as Compared to an In-House qPCR Assay to Detect Mucorales DNA in Serum Specimens., J Fungi (Basel) 2022 Jul; 8(8): .
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2022Combination of mycological criteria: a better surrogate to identify COVID-19 associated pulmonary aspergillosis patients and evaluate prognosis?, J Clin Microbiol 2022 Jan; (): JCM0216921.
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2021COVID-19-Associated Pulmonary Aspergillosis, Fungemia, and Pneumocystosis in the Intensive Care Unit: a Retrospective Multicenter Observational Cohort during the First French Pandemic Wave., Microbiol Spectr 2021 Oct; (): e0113821.
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2021Different repartition of the cryptic species of black aspergilli according to the anatomical sites in human infections, in a French University hospital., Med Mycol 2021 May; (): .
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2021Prospective comparison of (1,3)-beta-D-glucan detection using colorimetric and turbidimetric assays for diagnosing invasive fungal disease., Med Mycol 2021 Apr; (): .
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2021Evaluation of a New Histoplasma spp. Quantitative RT-PCR Assay., J Mol Diagn 2021 Mar; (): .
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2021Cerebral histoplasmosis caused by Histoplasma capsulatum var. duboisii in a patient with no known immunodeficiency., J Travel Med 2021 01; 28(1): .
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2020Risk factors associated with COVID-19-associated pulmonary aspergillosis in ICU patients: a French multicentric retrospective cohort., Clin Microbiol Infect 2020 Dec; (): .
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2020Fungal infections should be part of the core outcome set for COVID-19., Lancet Infect Dis 2020 Dec; (): .
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2020Correlation Between Pneumocystis jirovecii Mitochondrial Genotypes and High and Low Fungal Loads Assessed by Single Nucleotide Primer Extension Assay and Quantitative Real-Time PCR., J. Eukaryot. Microbiol. ; 62(5): 650-6.
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2020Clinical, Diagnostic, and Treatment Disparities between HIV-Infected and Non-HIV-Infected Immunocompromised Patients with Pneumocystis jirovecii Pneumonia., Respiration ; 96(1): 52-65.
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2020Entamoeba histolytica DNA Detection in Serum of Suspected Amoebic Liver Abscess., J. Clin. Microbiol. 2020 Aug; (): .
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2020Deep cutaneous fungal infections in solid-organ transplant recipients., J. Am. Acad. Dermatol. 2020 Aug; 83(2): 455-462.
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2020Failure of multiplex meningitis/encephalitis (ME) NAT during cryptococcal meningitis in solid organ recipients., Transpl Infect Dis 2020 Aug; 22(4): e13263.
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2020The Fungal PCR Initiative’s evaluation of in-house and commercial Pneumocystis jirovecii qPCR assays: Toward a standard for a diagnostics assay., Med. Mycol. 2020 Aug; 58(6): 779-788.
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2020Evaluation of the COVID-19 IgG/IgM Rapid Test from Orient Gene Biotech., J. Clin. Microbiol. 2020 07; 58(8): .
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2020Dormancy in Cryptococcus neoformans: 60 years of accumulating evidence., J. Clin. Invest. 2020 Jul; 130(7): 3353-3360.
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2020Interlaboratory evaluation of Mucorales PCR assays for testing serum specimens: A study by the fungal PCR Initiative and the Modimucor study group., Med. Mycol. 2020 Jun; (): .
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2020Prevalence of putative invasive pulmonary aspergillosis in critically ill patients with COVID-19., Lancet Respir Med 2020 06; 8(6): e48-e49.
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2020Outcome and characteristics of invasive fungal infections in critically ill burn patients: A multicenter retrospective study., Mycoses 2020 Jun; 63(6): 535-542.
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2020Tracing the Evolutionary History and Global Expansion of Candida auris Using Population Genomic Analyses., mBio 2020 Apr; 11(2): .
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2020Aspergillus flavus malignant external otitis in a diabetic patient: case report and literature review., Infection 2020 Apr; 48(2): 193-203.
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2020Tracking a Global Threat: a New Genotyping Method for Candida auris., mBio 2020 03; 11(2): .
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2020Emerging mould infections: Get prepared to meet unexpected fungi in your patient, Medical Mycology, 2020, 58 (2), pp.156-162. ⟨10.1093/mmy/myz039⟩.
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2020Time to and differential time to blood culture positivity for assessing catheter-related yeast fungaemia: A longitudinal, 7-year study in a single university hospital., Mycoses 2020 Jan; 63(1): 95-103.
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2020Comparison of MultiLocus Sequence Typing (MLST) and Microsatellite Length Polymorphism (MLP) for Pneumocystis jirovecii genotyping., Comput Struct Biotechnol J 2020 ; 18(): 2890-2896.
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2019Quantification of Pneumocystis jirovecii: Cross-Platform Comparison of One qPCR Assay with Leading Platforms and Six Master Mixes., J Fungi (Basel) 2019 Dec; 6(1): .
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2019Correction for Cornu et al., “Evaluation of Mass Spectrometry-Based Detection of Panfungal Serum Disaccharide for Diagnosis of Invasive Fungal Infections: Results from a Collaborative Study Involving Six European Clinical Centers”., J. Clin. Microbiol. 2019 Dec; 58(1): .
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2019Global guideline for the diagnosis and management of mucormycosis: an initiative of the European Confederation of Medical Mycology in cooperation with the Mycoses Study Group Education and Research Consortium., Lancet Infect Dis 2019 12; 19(12): e405-e421.
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2019Outbreak-Causing Fungi: Pneumocystis jirovecii., Mycopathologia 2019 Nov; (): .
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2019New Insights Into Cryptococcus Spp. Biology and Cryptococcal Meningitis., Curr Neurol Neurosci Rep 2019 10; 19(10): 81.
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2019ECMM CandiReg-A ready to use platform for outbreaks and epidemiological studies., Mycoses 2019 Oct; 62(10): 920-927.
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2019Anti-fungal activity of a novel triazole, PC1244, against emerging azole-resistant Aspergillus fumigatus and other species of Aspergillus., J. Antimicrob. Chemother. 2019 10; 74(10): 2950-2958.
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2019A comprehensive assessment of demographic, environmental, and host genetic associations with gut microbiome diversity in healthy individuals., Microbiome 2019 Sep; 7(1): 130.
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2019Intranasal Inoculation of Cryptococcus neoformans in Mice Produces Nasal Infection with Rapid Brain Dissemination., mSphere 2019 08; 4(4): .
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2019The enigmatic role of fungal annexins: the case of Cryptococcus neoformans., Microbiology (Reading, Engl.) 2019 08; 165(8): 852-862.
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2019Cryptococcus neoformans resists to drastic conditions by switching to viable but non-culturable cell phenotype., PLoS Pathog 2019 Jul; 15(7): e1007945.
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2019Development and validation of the European QUALity (EQUAL) score for mucormycosis management in haematology., J. Antimicrob. Chemother. 2019 06; 74(6): 1704-1712.
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2019Evaluation of Mass Spectrometry-Based Detection of Panfungal Serum Disaccharide for Diagnosis of Invasive Fungal Infections: Results from a Collaborative Study Involving Six European Clinical Centers., J. Clin. Microbiol. 2019 05; 57(5): .
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2019Primary antifungal prophylaxis with micafungin after allogeneic hematopoietic stem cell transplantation: a monocentric prospective study., Ann. Hematol. 2019 Apr; 98(4): 1033-1035.
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2019Why are so many cases of invasive aspergillosis missed?, Med. Mycol. 2019 Apr; 57(Supplement_2): S94-S103.
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2019Outcome and potentially modifiable risk factors for candidemia in critically ill burns patients: A matched cohort study., Mycoses 2019 Mar; 62(3): 237-246.
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2019Correction to: AMBIsome Therapy Induction OptimisatioN (AMBITION): High Dose AmBisome for Cryptococcal Meningitis Induction Therapy in sub-Saharan Africa: Study Protocol for a Phase 3 Randomised Controlled Non-Inferiority Trial., Trials 2019 01; 20(1): 48.
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2019Recent advances in managing HIV-associated cryptococcal meningitis., F1000Res 2019 ; 8(): .
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2018Reactivation of dormant/latent fungal infection., J. Infect. 2018 12; 77(6): 463-468.
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2018AMBIsome Therapy Induction OptimisatioN (AMBITION): High Dose AmBisome for Cryptococcal Meningitis Induction Therapy in sub-Saharan Africa: Study Protocol for a Phase 3 Randomised Controlled Non-Inferiority Trial., Trials 2018 Nov; 19(1): 649.
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2018Global guidelines and initiatives from the European Confederation of Medical Mycology to improve patient care and research worldwide: New leadership is about working together., Mycoses 2018 Nov; 61(11): 885-894.
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2018Human thymopoiesis is influenced by a common genetic variant within the TCRA-TCRD locus., Sci Transl Med 2018 Sep; 10(457): .
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2018Human genetic variants and age are the strongest predictors of humoral immune responses to common pathogens and vaccines., Genome Med 2018 Jul; 10(1): 59.
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2018Failure of voriconazole therapy due to acquired azole resistance in Aspergillus fumigatus in a kidney transplant recipient with chronic necrotizing aspergillosis., Am. J. Transplant. 2018 09; 18(9): 2352-2355.
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2018Diagnostic and therapeutic strategies in cryptococcosis: impact on outcome., Mem. Inst. Oswaldo Cruz 2018 ; 113(7): e180050.
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2018Titan cells formation in Cryptococcus neoformans is finely tuned by environmental conditions and modulated by positive and negative genetic regulators., PLoS Pathog 2018 05; 14(5): e1006982.
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2018In Vitro and In Vivo Efficacy of a Novel and Long-Acting Fungicidal Azole, PC1244, on Aspergillus fumigatus Infection., Antimicrob. Agents Chemother. 2018 05; 62(5): .
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2018Outbreak of Invasive Wound Mucormycosis in a Burn Unit Due to Multiple Strains of Mucor circinelloides f. circinelloides Resolved by Whole-Genome Sequencing., mBio 2018 04; 9(2): .
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2018Natural variation in the parameters of innate immune cells is preferentially driven by genetic factors., Nat Immunol 2018 Mar; 19(3): 302-314.
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2018Mechanisms of Cryptococcus neoformans-Mediated Host Damage., Front Immunol 2018 ; 9(): 855.
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2018Recent advances in the understanding and management of mucormycosis., F1000Res 2018 ; 7(): .
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2018Corrigendum: Continuous Decline of Toxoplasma gondii Seroprevalence in Hospital: A 1997-2014 Longitudinal Study in Paris, France., Front Microbiol 2018 ; 9(): 2814.
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2018Continuous Decline of Toxoplasma gondii Seroprevalence in Hospital: A 1997-2014 Longitudinal Study in Paris, France., Front Microbiol 2018 ; 9(): 2369.
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2017Fungal infections in patients treated with ibrutinib: two unusual cases of invasive aspergillosis and cryptococcal meningoencephalitis., Leuk. Lymphoma 2017 12; 58(12): 2981-2982.
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2017A cell impedance-based real-time in vitro assay to assess the toxicity of amphotericin B formulations., Toxicol. Appl. Pharmacol. 2017 11; 334(): 18-23.
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2017Tracing Genetic Exchange and Biogeography of Cryptococcus neoformans var. grubii at the Global Population Level., Genetics 2017 09; 207(1): 327-346.
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2017Hepatitis E virus-induced primary cutaneous CD30(+) T cell lymphoproliferative disorder., J. Hepatol. 2017 12; 67(6): 1334-1339.
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2017Diversity of Pneumocystis jirovecii Across Europe: A Multicentre Observational Study., EBioMedicine 2017 Aug; 22(): 155-163.
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2017Continuous increase of Trichophyton tonsurans as a cause of tinea capitis in the urban area of Paris, France: a 5-year-long study., Med. Mycol. 2017 Jul; 55(5): 476-484.
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2017Investigating Clinical Issues by Genotyping of Medically Important Fungi: Why and How?, Clin Microbiol Rev 2017 Jul; 30(3): 671-707.
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2017[Fungal sinusitis]., Rev Mal Respir 2017 Jun; 34(6): 672-692.
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2017In Vitro and In Vivo Antifungal Profile of a Novel and Long-Acting Inhaled Azole, PC945, on Aspergillus fumigatus Infection., Antimicrob. Agents Chemother. 2017 05; 61(5): .
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2017Pneumocystis jirovecii pneumonia: still a concern in patients with haematological malignancies and stem cell transplant recipients-authors’ response., J. Antimicrob. Chemother. 2017 04; 72(4): 1266-1268.
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2017Performance evaluation of multiplex PCR including Aspergillus-not so simple!, Med. Mycol. 2017 Jan; 55(1): 56-62.
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2017Circulating Aspergillus fumigatus DNA Is Quantitatively Correlated to Galactomannan in Serum., Front Microbiol 2017 ; 8(): 2040.
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2017Molecular Demonstration of a Pneumocystis Outbreak in Stem Cell Transplant Patients: Evidence for Transmission in the Daycare Center., Front Microbiol 2017 ; 8(): 700.
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2017Challenges in microbiological diagnosis of invasive Aspergillus infections., F1000Res 2017 ; 6(): .
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2017Pneumocystis jirovecii detection in asymptomatic patients: what does its natural history tell us?, F1000Res 2017 ; 6(): 739.
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2016Detection of Circulating Mucorales DNA in Critically Ill Burn Patients: Preliminary Report of a Screening Strategy for Early Diagnosis and Treatment., Clin. Infect. Dis. 2016 Nov; 63(10): 1312-1317.
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2016Early diagnosis and monitoring of mucormycosis by detection of circulating DNA in serum: retrospective analysis of 44 cases collected through the French Surveillance Network of Invasive Fungal Infections (RESSIF)., Clin. Microbiol. Infect. 2016 Sep; 22(9): 810.e1-810.e8.
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2016ECIL guidelines for preventing Pneumocystis jirovecii pneumonia in patients with haematological malignancies and stem cell transplant recipients., J. Antimicrob. Chemother. 2016 09; 71(9): 2397-404.
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2016ECIL guidelines for the diagnosis of Pneumocystis jirovecii pneumonia in patients with haematological malignancies and stem cell transplant recipients., J. Antimicrob. Chemother. 2016 09; 71(9): 2386-96.
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2016Pneumocystis jirovecii pneumonia: still a concern in patients with haematological malignancies and stem cell transplant recipients., J. Antimicrob. Chemother. 2016 09; 71(9): 2379-85.
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2016[Sinonasal fungal infections are not exclusively due to mucorales and Aspergillus!]., Ann Pathol 2016 Aug; 36(4): 245-51.
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2016New therapeutic strategies for invasive aspergillosis in the era of azole resistance: how should the prevalence of azole resistance be defined?, J. Antimicrob. Chemother. 2016 08; 71(8): 2075-8.
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2016Variation in copy number of the 28S rDNA of Aspergillus fumigatus measured by droplet digital PCR and analog quantitative real-time PCR., J. Microbiol. Methods 2016 08; 127(): 160-163.
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2016Aspergillus spp. invasive external otitis: favourable outcome with a medical approach., Clin. Microbiol. Infect. 2016 May; 22(5): 434-7.
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2016Seroprevalence of Toxoplasma gondii and direct genotyping using minisequencing in free-range pigs in Burkina Faso., Int. J. Food Microbiol. 2016 Aug; 230(): 10-5.
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2016Treatment with adalimumab for severe immune reconstitution inflammatory syndrome in an HIV-infected patient presenting with cryptococcal meningitis., Med Mal Infect 2016 May; 46(3): 154-6.
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2016Diversity of Pneumocystis jirovecii during Infection Revealed by Ultra-Deep Pyrosequencing., Front Microbiol 2016 ; 7(): 733.
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2016Fluconazole and Echinocandin Resistance of Candida glabrata Correlates Better with Antifungal Drug Exposure Rather than with MSH2 Mutator Genotype in a French Cohort of Patients Harboring Low Rates of Resistance., Front Microbiol 2016 ; 7(): 2038.
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2016Copy Number Variation of Mitochondrial DNA Genes in Pneumocystis jirovecii According to the Fungal Load in BAL Specimens., Front Microbiol 2016 ; 7(): 1413.
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2016Azole Resistance of Aspergillus fumigatus in Immunocompromised Patients with Invasive Aspergillosis, Emerging Infect. Dis. 2016 Jan;22(1):157-8.
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2015[Cryptococcus where they are not expected: Five case reports of extra-cerebral and extra-pulmonary cryptococcosis]., Ann Pathol 2015 Dec; 35(6): 479-85.
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2015[NEW STRATEGIES FOR THE MICROBIOLOGICAL DIAGNOSIS OF VISCERAL MYCOSES], Rev Prat 2015 Dec;65(10):1325-9.
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2015Whole genome sequencing to investigate an outbreak of mucormycosis in a burn unit, Mycoses 2015 Oct;58(S4):23-23.
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2015Mucormycosis: New Developments into a Persistently Devastating Infection., Semin Respir Crit Care Med 2015 Oct; 36(5): 692-705.
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2015High diversity of non-sporulating moulds in respiratory specimens of immunocompromised patients: should all the species be reported when diagnosing invasive aspergillosis?, Mycoses 2015 Sep; 58(9): 557-64.
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2015Épidémie de mucormycose dans un centre de traitement des brûlés : des biomarqueurs diagnostiques au séquençage complets des souches, J. Myc. Med. 2015 Sep; 25(3):219.
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2015Molecular identification of Mucorales in human tissues: contribution of PCR electrospray-ionization mass spectrometry., Clin. Microbiol. Infect. 2015 Jun; 21(6): 594.e1-5.
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2015Dual Invasive Infection with Phaeoacremonium parasiticum and Paraconiothyrium cyclothyrioides in a Renal Transplant Recipient: Case Report and Comprehensive Review of the Literature of Phaeoacremonium Phaeohyphomycosis., J. Clin. Microbiol. 2015 Jul; 53(7): 2084-94.
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2015The Milieu Intérieur study – an integrative approach for study of human immunological variance., Clin Immunol 2015 Apr; 157(2): 277-93.
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2015Utility of adding Pneumocystis jirovecii DNA detection in nasopharyngeal aspirates in immunocompromised adult patients with febrile pneumonia., Med. Mycol. 2015 Apr; 53(3): 241-7.
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2015Cryptococcus neoformans host adaptation: toward biological evidence of dormancy, MBio 2015;6(2).
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2015Muscle diffusion of liposomal amphotericin B and posaconazole in critically ill burn patients receiving continuous hemodialysis, Intensive Care Med 2015 May;41(5):948-9.
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2015Combined medico-surgical strategy for invasive sino-orbito-cerebral breakthrough fungal infection with Hormographiella aspergillata in an acute leukaemia patient, Mycoses 2015 May;58(5):308-12.
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2015New Short Tandem Repeat-Based Molecular Typing Method for Pneumocystis jirovecii Reveals Intrahospital Transmission between Patients from Different Wards., PLoS ONE 2015 ; 10(5): e0125763.
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2015Importance of operational factors in the reproducibility of Aspergillus galactomannan enzyme immune assay., PLoS ONE 2015 ; 10(4): e0124044.
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2014Mucormycosis: a new concern in the transplant ward?, Curr. Opin. Hematol. 2014 Nov; 21(6): 482-90.
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2014Misidentification of Saprochaete clavata as Magnusiomyces capitatus in clinical isolates: utility of internal transcribed spacer sequencing and matrix-assisted laser desorption ionization-time of flight mass spectrometry and importance of reliable databases., J Clin Microbiol 2014 Jun; 52(6): 2196-8.
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2014Difficulties with molecular diagnostic tests for mould and yeast infections: where do we stand?, Clin. Microbiol. Infect. 2014 Jun; 20 Suppl 6(): 36-41.
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2014Iterative breakthrough invasive aspergillosis due to TR(34) /L98H azole-resistant Aspergillus fumigatus and Emericella sublata in a single hematopoietic stem cell transplant patient, Transpl Infect Dis 2014 Aug;16(4):687-91.
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2014Antifungal pre-emptive strategy for high-risk neutropenic patients: why the story is still ongoing, Clin. Microbiol. Infect. 2014 Jun;20 Suppl 6:27-35.
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2013Direct genotyping of Toxoplasma gondii from amniotic fluids based on B1 gene polymorphism using minisequencing analysis., BMC Infect. Dis. 2013 Nov; 13(): 552.
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2012Azole preexposure affects the Aspergillus fumigatus population in patients., Antimicrob. Agents Chemother. 2012 Sep; 56(9): 4948-50.
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2012In vitro combination of anidulafungin and voriconazole against intrinsically azole-susceptible and -resistant Aspergillus spp, Antimicrob. Agents Chemother. 2012 Aug;56(8):4500-3.
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2011Matrix-assisted laser desorption ionization time-of-flight mass spectrometry for fast and accurate identification of clinically relevant Aspergillus species, Clin. Microbiol. Infect. 2011 May;17(5):750-5.
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2011Real-time PCR assay-based strategy for differentiation between active Pneumocystis jirovecii pneumonia and colonization in immunocompromised patients, Clin. Microbiol. Infect. 2011 Oct;17(10):1531-7.
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2011Dynamics of Cryptococcus neoformans-macrophage interactions reveal that fungal background influences outcome during cryptococcal meningoencephalitis in humans., mBio 2011 ; 2(4): .
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2010Low prevalence of resistance to azoles in Aspergillus fumigatus in a French cohort of patients treated for haematological malignancies., J. Antimicrob. Chemother. 2011 Feb; 66(2): 371-4.
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2010Microsporum praecox: molecular identification of a new case and review of the literature., Mycopathologia 2011 Jan; 171(1): 61-5.
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2010Real-time identification of bacteria and Candida species in positive blood culture broths by matrix-assisted laser desorption ionization-time of flight mass spectrometry., J. Clin. Microbiol. 2010 May; 48(5): 1542-8.
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2009MALDI-TOF MS-based drug susceptibility testing of pathogens: the example of Candida albicans and fluconazole, Proteomics 2009 Oct;9(20):4627-31.
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2008Invasive pulmonary infection due to Trichoderma longibrachiatum mimicking invasive Aspergillosis in a neutropenic patient successfully treated with voriconazole combined with caspofungin, Clin. Infect. Dis. 2008 May;46(10):e116-8.