• 2023
  Galmiche S, Thoreau B, Bretagne S, Alanio A, Paugam A, Letscher-Bru V, Cassaing S, Gangneux JP, Guegan H, Favennec L, Minoza A, Morio F, Bonhomme J, Desoubeaux G, Eloy O, Hasseine L, Sasso M, Millon L, Bellanger AP, Poirier P, Moniot M, Chouaki T, Huguenin A, Dalle F, Bouteille B, Nicolas M, Desbois-Nogard N, Bougnoux ME, Danion F, Poindron V, Néel A, Boukris-Sitbon K, Lanternier F, Terrier B, Invasive fungal diseases in patients with autoimmune diseases: a case series from the French RESSIF network., RMD Open 2023 Aug; 9(3): .
• 2023
  Juliana Rizzo, Adèle Trottier, Frédérique Moyrand, Jean-Yves J.-Y. Coppée, Corinne Maufrais, Ana Claudia G. Zimbres, Thi Tuong Vi Dang, Alexandre Alanio, M. Desnos-Ollivier, Isabelle Mouyna, Gérard Péhau-Arnaude, Pierre-Henri Commere, Sophie Novault, Iuliana V. Ene, Leonardo Nimrichter, Marcio Rodrigues, Guilhem Janbon, Coregulation of extracellular vesicle production and fluconazole susceptibility in Cryptococcus neoformans, mBio, 2023, pp.e00870-23. ⟨10.1128/mbio.00870-23⟩.
• 2022
  Alanio A, Snell HM, Cordier C, Desnos-Olivier M, Dellière S, Aissaoui N, Sturny-Leclère A, Da Silva E, Eblé C, Rouveau M, Thégat M, Zebiche W, Lafaurie M, Denis B, Touratier S, Benyamina M, Dudoignon E, Hamane S, Cuomo CA, Dépret F, , First Patient-to-Patient Intrahospital Transmission of Clade I Candida auris in France Revealed after a Two-Month Incubation Period., Microbiol Spectr 2022 Sep; (): e0183322.
• 2022
  Ghelfenstein-Ferreira T, Verdurme L, Alanio A, , Analytical Performance of the Commercial MucorGenius® Assay as Compared to an In-House qPCR Assay to Detect Mucorales DNA in Serum Specimens., J Fungi (Basel) 2022 Jul; 8(8): .
• 2022
  Dellière S, Dudoignon E, Voicu S, Collet M, Fodil S, Plaud B, Chousterman B, Bretagne S, Azoulay E, Mebazaa A, Dépret F, Mégarbane B, Alanio A, , Combination of mycological criteria: a better surrogate to identify COVID-19 associated pulmonary aspergillosis patients and evaluate prognosis?, J Clin Microbiol 2022 Jan; (): JCM0216921.
• 2021
  Bretagne S, Sitbon K, Botterel F, Dellière S, Letscher-Bru V, Chouaki T, Bellanger AP, Bonnal C, Fekkar A, Persat F, Costa D, Bourgeois N, Dalle F, Lussac-Sorton F, Paugam A, Cassaing S, Hasseine L, Huguenin A, Guennouni N, Mazars E, Le Gal S, Sasso M, Brun S, Cadot L, Cassagne C, Cateau E, Gangneux JP, Moniot M, Roux AL, Tournus C, Desbois-Nogard N, Le Coustumier A, Moquet O, Alanio A, Dromer F, , , COVID-19-Associated Pulmonary Aspergillosis, Fungemia, and Pneumocystosis in the Intensive Care Unit: a Retrospective Multicenter Observational Cohort during the First French Pandemic Wave., Microbiol Spectr 2021 Oct; (): e0113821.
• 2021
  Gits-Muselli M, Hamane S, Verillaud B, Cherpin E, Denis B, Bondeelle L, Touratier S, Alanio A, Garcia-Hermoso D, Bretagne S, , Different repartition of the cryptic species of black aspergilli according to the anatomical sites in human infections, in a French University hospital., Med Mycol 2021 May; (): .
• 2021
  Alanio A, Gits-Muselli M, Guigue N, Denis B, Bergeron A, Touratier S, Hamane S, Bretagne S, , Prospective comparison of (1,3)-beta-D-glucan detection using colorimetric and turbidimetric assays for diagnosing invasive fungal disease., Med Mycol 2021 Apr; (): .
• 2021
  Alanio A, Gits-Muselli M, Lanternier F, Sturny-Leclère A, Benazra M, Hamane S, Rodrigues AM, Garcia-Hermoso D, Lortholary O, Dromer F, Bretagne S, , , Evaluation of a New Histoplasma spp. Quantitative RT-PCR Assay., J Mol Diagn 2021 Mar; (): .
• 2021
  Paccoud O, Nervo M, Alanio A, Garcia-Hermoso D, Bougnoux ME, Mateo J, Mandonnet E, Lortholary O, Lanternier F, Adle-Biassette H, , Cerebral histoplasmosis caused by Histoplasma capsulatum var. duboisii in a patient with no known immunodeficiency., J Travel Med 2021 01; 28(1): .
• 2020
  Dellière S, Dudoignon E, Fodil S, Voicu S, Collet M, Oillic PA, Salmona M, Dépret F, Ghelfenstein-Ferreira T, Plaud B, Chousterman B, Bretagne S, Azoulay E, Mebazaa A, Megarbane B, Alanio A, , Risk factors associated with COVID-19-associated pulmonary aspergillosis in ICU patients: a French multicentric retrospective cohort., Clin Microbiol Infect 2020 Dec; (): .
• 2020
  Verweij PE, Alanio A, , Fungal infections should be part of the core outcome set for COVID-19., Lancet Infect Dis 2020 Dec; (): .
• 2020
  Alanio A, Olivi M, Cabaret O, Foulet F, Bellanger AP, Millon L, Berceanu A, Cordonnier C, Costa JM, Bretagne S, , Correlation Between Pneumocystis jirovecii Mitochondrial Genotypes and High and Low Fungal Loads Assessed by Single Nucleotide Primer Extension Assay and Quantitative Real-Time PCR., J. Eukaryot. Microbiol. ; 62(5): 650-6.
• 2020
  Salzer HJF, Schäfer G, Hoenigl M, Günther G, Hoffmann C, Kalsdorf B, Alanio A, Lange C, , Clinical, Diagnostic, and Treatment Disparities between HIV-Infected and Non-HIV-Infected Immunocompromised Patients with Pneumocystis jirovecii Pneumonia., Respiration ; 96(1): 52-65.
• 2020
  Ghelfenstein-Ferreira T, Gits-Muselli M, Dellière S, Denis B, Guigue N, Hamane S, Alanio A, Bretagne S, , Entamoeba histolytica DNA Detection in Serum of Suspected Amoebic Liver Abscess., J. Clin. Microbiol. 2020 Aug; (): .
• 2020
  Galezowski A, Delyon J, Le Cleach L, Guégan S, Ducroux E, Alanio A, Lastennet D, Moguelet P, Dadban A, Leccia MT, Le Pelletier F, Francès C, Lebbé C, Barete S, , , Deep cutaneous fungal infections in solid-organ transplant recipients., J. Am. Acad. Dermatol. 2020 Aug; 83(2): 455-462.
• 2020
  Pilmis B, Bougnoux ME, Guery R, Senghor Y, Le Monnier A, Lanternier F, Bretagne S, Alanio A, Lortholary O, , Failure of multiplex meningitis/encephalitis (ME) NAT during cryptococcal meningitis in solid organ recipients., Transpl Infect Dis 2020 Aug; 22(4): e13263.
• 2020
  Gits-Muselli M, White PL, Mengoli C, Chen S, Crowley B, Dingemans G, Fréalle E, L Gorton R, Guiver M, Hagen F, Halliday C, Johnson G, Lagrou K, Lengerova M, Melchers WJG, Novak-Frazer L, Rautemaa-Richardson R, Scherer E, Steinmann J, Cruciani M, Barnes R, Donnelly JP, Loeffler J, Bretagne S, Alanio A, , The Fungal PCR Initiative’s evaluation of in-house and commercial Pneumocystis jirovecii qPCR assays: Toward a standard for a diagnostics assay., Med. Mycol. 2020 Aug; 58(6): 779-788.
• 2020
  Dellière S, Salmona M, Minier M, Gabassi A, Alanio A, Le Goff J, Delaugerre C, Chaix ML, , , Evaluation of the COVID-19 IgG/IgM Rapid Test from Orient Gene Biotech., J. Clin. Microbiol. 2020 07; 58(8): .
• 2020
  Alanio A, , Dormancy in Cryptococcus neoformans: 60 years of accumulating evidence., J. Clin. Invest. 2020 Jul; 130(7): 3353-3360.
• 2020
  Rocchi S, Scherer E, Mengoli C, Alanio A, Botterel F, Bougnoux ME, Bretagne S, Cogliati M, Cornu M, Dalle F, Damiani C, Denis J, Fuchs S, Gits-Muselli M, Hagen F, Halliday C, Hare R, Iriart X, Klaassen C, Lackner M, Lengerova M, Letscher-Bru V, Morio F, Nourrisson C, Posch W, Sendid B, Springer J, Willinger B, White PL, Barnes RA, Cruciani M, Donnelly JP, Loeffler J, Millon L, , Interlaboratory evaluation of Mucorales PCR assays for testing serum specimens: A study by the fungal PCR Initiative and the Modimucor study group., Med. Mycol. 2020 Jun; (): .
• 2020
  Alanio A, Dellière S, Fodil S, Bretagne S, Mégarbane B, , Prevalence of putative invasive pulmonary aspergillosis in critically ill patients with COVID-19., Lancet Respir Med 2020 06; 8(6): e48-e49.
• 2020
  Maurel V, Denis B, Camby M, Jeanne M, Cornesse A, Glavnik B, Alanio A, Rousseau AF, Lefloch R, Lagrange-Xelot M, Textoris J, Wiramus S, de Tymowski C, Legrand M, , Outcome and characteristics of invasive fungal infections in critically ill burn patients: A multicenter retrospective study., Mycoses 2020 Jun; 63(6): 535-542.
• 2020
  Chow NA, Muñoz JF, Gade L, Berkow EL, Li X, Welsh RM, Forsberg K, Lockhart SR, Adam R, Alanio A, Alastruey-Izquierdo A, Althawadi S, Araúz AB, Ben-Ami R, Bharat A, Calvo B, Desnos-Ollivier M, Escandón P, Gardam D, Gunturu R, Heath CH, Kurzai O, Martin R, Litvintseva AP, Cuomo CA, , Tracing the Evolutionary History and Global Expansion of Candida auris Using Population Genomic Analyses., mBio 2020 Apr; 11(2): .
• 2020
  Pichon M, Joly V, Argy N, Houze S, Bretagne S, Alanio A, Wassef M, Verillaud B, Yazdanpanah Y, , Aspergillus flavus malignant external otitis in a diabetic patient: case report and literature review., Infection 2020 Apr; 48(2): 193-203.
• 2020
  Cuomo CA, Alanio A, , Tracking a Global Threat: a New Genotyping Method for Candida auris., mBio 2020 03; 11(2): .
• 2020
  Dellière S, Rivero-Menendez O, Gautier C, Garcia-Hermoso D, Alastruey-Izquierdo A, Alanio A, , Emerging mould infections: Get prepared to meet unexpected fungi in your patient., Med. Mycol. 2020 Feb; 58(2): 156-162.
• 2020
  Gits-Muselli M, Villiers S, Hamane S, Berçot B, Donay JL, Denis B, Guigue N, Alanio A, Bretagne S, , Time to and differential time to blood culture positivity for assessing catheter-related yeast fungaemia: A longitudinal, 7-year study in a single university hospital., Mycoses 2020 Jan; 63(1): 95-103.
• 2020
  Gits-Muselli M, Campagne P, Desnos-Ollivier M, Le Pape P, Bretagne S, Morio F, Alanio A, , Comparison of MultiLocus Sequence Typing (MLST) and Microsatellite Length Polymorphism (MLP) for Pneumocystis jirovecii genotyping., Comput Struct Biotechnol J 2020 ; 18(): 2890-2896.
• 2019
  Dellière S, Gits-Muselli M, White PL, Mengoli C, Bretagne S, Alanio A, , Quantification of Pneumocystis jirovecii: Cross-Platform Comparison of One qPCR Assay with Leading Platforms and Six Master Mixes., J Fungi (Basel) 2019 Dec; 6(1): .
• 2019
  Cornu M, Sendid B, Mery A, François N, Mikulska M, Letscher-Bru V, De Carolis E, Damonti L, Titecat M, Bochud PY, Alanio A, Sanguinetti M, Viscoli C, Herbrecht R, Guerardel Y, Poulain D, , Correction for Cornu et al., “Evaluation of Mass Spectrometry-Based Detection of Panfungal Serum Disaccharide for Diagnosis of Invasive Fungal Infections: Results from a Collaborative Study Involving Six European Clinical Centers”., J. Clin. Microbiol. 2019 Dec; 58(1): .
• 2019
  Cornely OA, Alastruey-Izquierdo A, Arenz D, Chen SCA, Dannaoui E, Hochhegger B, Hoenigl M, Jensen HE, Lagrou K, Lewis RE, Mellinghoff SC, Mer M, Pana ZD, Seidel D, Sheppard DC, Wahba R, Akova M, Alanio A, Al-Hatmi AMS, Arikan-Akdagli S, Badali H, Ben-Ami R, Bonifaz A, Bretagne S, Castagnola E, Chayakulkeeree M, Colombo AL, Corzo-León DE, Drgona L, Groll AH, Guinea J, Heussel CP, Ibrahim AS, Kanj SS, Klimko N, Lackner M, Lamoth F, Lanternier F, Lass-Floerl C, Lee DG, Lehrnbecher T, Lmimouni BE, Mares M, Maschmeyer G, Meis JF, Meletiadis J, Morrissey CO, Nucci M, Oladele R, Pagano L, Pasqualotto A, Patel A, Racil Z, Richardson M, Roilides E, Ruhnke M, Seyedmousavi S, Sidharthan N, Singh N, Sinko J, Skiada A, Slavin M, Soman R, Spellberg B, Steinbach W, Tan BH, Ullmann AJ, Vehreschild JJ, Vehreschild MJGT, Walsh TJ, White PL, Wiederhold NP, Zaoutis T, Chakrabarti A, , , Global guideline for the diagnosis and management of mucormycosis: an initiative of the European Confederation of Medical Mycology in cooperation with the Mycoses Study Group Education and Research Consortium., Lancet Infect Dis 2019 12; 19(12): e405-e421.
• 2019
  Dellière S, Gits-Muselli M, Bretagne S, Alanio A, , Outbreak-Causing Fungi: Pneumocystis jirovecii., Mycopathologia 2019 Nov; (): .
• 2019
  Temfack E, Boyer-Chammard T, Lawrence D, Delliere S, Loyse A, Lanternier F, Alanio A, Lortholary O, , New Insights Into Cryptococcus Spp. Biology and Cryptococcal Meningitis., Curr Neurol Neurosci Rep 2019 10; 19(10): 81.
• 2019
  Koehler P, Arendrup MC, Arikan-Akdagli S, Bassetti M, Bretagne S, Klingspor L, Lagrou K, Meis JF, Rautemaa-Richardson R, Schelenz S, Hamprecht A, Koehler FC, Kurzai O, Salmanton-García J, Vehreschild JJ, Alanio A, Alastruey-Izquierdo A, Arsic Arsenijevic V, Gangneux JP, Gow NAR, Hadina S, Hamal P, Johnson E, Klimko N, Lass-Flörl C, Mares M, Özenci V, Papp T, Roilides E, Sabino R, Segal E, Talento AF, Tortorano AM, Verweij PE, Hoenigl M, Cornely OA, , , ECMM CandiReg-A ready to use platform for outbreaks and epidemiological studies., Mycoses 2019 Oct; 62(10): 920-927.
• 2019
  Colley T, Sharma C, Alanio A, Kimura G, Daly L, Nakaoki T, Nishimoto Y, Bretagne S, Kizawa Y, Strong P, Rapeport G, Ito K, Meis JF, Chowdhary A, , Anti-fungal activity of a novel triazole, PC1244, against emerging azole-resistant Aspergillus fumigatus and other species of Aspergillus., J. Antimicrob. Chemother. 2019 10; 74(10): 2950-2958.
• 2019
  Scepanovic P, Hodel F, Mondot S, Partula V, Byrd A, Hammer C, Alanio C, Bergstedt J, Patin E, Touvier M, Lantz O, Albert ML, Duffy D, Quintana-Murci L, Fellay J, , , A comprehensive assessment of demographic, environmental, and host genetic associations with gut microbiome diversity in healthy individuals., Microbiome 2019 09; 7(1): 130.
• 2019
  Coelho C, Camacho E, Salas A, Alanio A, Casadevall A, , Intranasal Inoculation of Cryptococcus neoformans in Mice Produces Nasal Infection with Rapid Brain Dissemination., mSphere 2019 08; 4(4): .
• 2019
  Maryam M, Fu MS, Alanio A, Camacho E, Goncalves DS, Faneuff EE, Grossman NT, Casadevall A, Coelho C, , The enigmatic role of fungal annexins: the case of Cryptococcus neoformans., Microbiology (Reading, Engl.) 2019 08; 165(8): 852-862.
• 2019
  Hommel B, Sturny-Leclère A, Volant S, Veluppillai N, Duchateau M, Yu CH, Hourdel V, Varet H, Matondo M, Perfect JR, Casadevall A, Dromer F, Alanio A, Cryptococcus neoformans resists to drastic conditions by switching to viable but non-culturable cell phenotype., PLoS Pathog 2019 Jul; 15(7): e1007945.
• 2019
  Koehler P, Mellinghoff SC, Lagrou K, Alanio A, Arenz D, Hoenigl M, Koehler FC, Lass-Flörl C, Meis JF, Richardson M, Cornely OA, , Development and validation of the European QUALity (EQUAL) score for mucormycosis management in haematology., J. Antimicrob. Chemother. 2019 06; 74(6): 1704-1712.
• 2019
  Cornu M, Sendid B, Mery A, François N, Mikulska M, Letscher-Bru V, De Carolis E, Damonti L, Titecat M, Bochud PY, Alanio A, Sanguinetti M, Viscoli C, Herbrecht R, Guerardel Y, Poulain D, , Evaluation of Mass Spectrometry-Based Detection of Panfungal Serum Disaccharide for Diagnosis of Invasive Fungal Infections: Results from a Collaborative Study Involving Six European Clinical Centers., J. Clin. Microbiol. 2019 05; 57(5): .
• 2019
  Xhaard A, Porcher R, Bergeron A, Alanio A, Touratier S, Bretagne S, de Margerie-Mellon C, Sicre de Fontbrune F, Itzykson R, Coman T, Robin M, Cabannes-Hamy A, Socié G, Peffault de Latour R, , Primary antifungal prophylaxis with micafungin after allogeneic hematopoietic stem cell transplantation: a monocentric prospective study., Ann. Hematol. 2019 Apr; 98(4): 1033-1035.
• 2019
  Danion F, Rouzaud C, Duréault A, Poirée S, Bougnoux ME, Alanio A, Lanternier F, Lortholary O, , Why are so many cases of invasive aspergillosis missed?, Med. Mycol. 2019 Apr; 57(Supplement_2): S94-S103.
• 2019
  Dudoignon E, Alanio A, Anstey J, Depret F, Coutrot M, Fratani A, Jully M, Cupaciu A, Chaussard M, Oueslati H, Ferry A, Benyamina M, de Tymowski C, Boccara D, Serror K, Chaouat M, Mimoun M, Lafaurie M, Denis B, Gits-Muselli M, Bretagne S, Mebazaa A, Legrand M, Soussi S, , , Outcome and potentially modifiable risk factors for candidemia in critically ill burns patients: A matched cohort study., Mycoses 2019 Mar; 62(3): 237-246.
• 2019
  Lawrence DS, Youssouf N, Molloy SF, Alanio A, Alufandika M, Boulware DR, Boyer-Chammard T, Chen T, Dromer F, Hlupeni A, Hope W, Hosseinipour MC, Kanyama C, Lortholary O, Loyse A, Meya DB, Mosepele M, Muzoora C, Mwandumba HC, Ndhlovu CE, Niessen L, Schutz C, Stott KE, Wang D, Lalloo DG, Meintjes G, Jaffar S, Harrison TS, Jarvis JN, , Correction to: AMBIsome Therapy Induction OptimisatioN (AMBITION): High Dose AmBisome for Cryptococcal Meningitis Induction Therapy in sub-Saharan Africa: Study Protocol for a Phase 3 Randomised Controlled Non-Inferiority Trial., Trials 2019 01; 20(1): 48.
• 2019
  Boyer-Chammard T, Temfack E, Alanio A, Jarvis JN, Harrison TS, Lortholary O, , Recent advances in managing HIV-associated cryptococcal meningitis., F1000Res 2019 ; 8(): .
• 2018
  Brunet K, Alanio A, Lortholary O, Rammaert B, , Reactivation of dormant/latent fungal infection., J. Infect. 2018 12; 77(6): 463-468.
• 2018
  Lawrence DS, Youssouf N, Molloy SF, Alanio A, Alufandika M, Boulware DR, Boyer-Chammard T, Chen T, Dromer F, Hlupeni A, Hope W, Hosseinipour MC, Kanyama C, Lortholary O, Loyse A, Meya DB, Mosepele M, Muzoora C, Mwandumba HC, Ndhlovu CE, Niessen L, Schutz C, Stott KE, Wang D, Lalloo DG, Meintjes G, Jaffar S, Harrison TS, Jarvis JN, , AMBIsome Therapy Induction OptimisatioN (AMBITION): High Dose AmBisome for Cryptococcal Meningitis Induction Therapy in sub-Saharan Africa: Study Protocol for a Phase 3 Randomised Controlled Non-Inferiority Trial., Trials 2018 Nov; 19(1): 649.
• 2018
  Hoenigl M, Gangneux JP, Segal E, Alanio A, Chakrabarti A, Chen SC, Govender N, Hagen F, Klimko N, Meis JF, Pasqualotto AC, Seidel D, Walsh TJ, Lagrou K, Lass-Flörl C, Cornely OA, , , Global guidelines and initiatives from the European Confederation of Medical Mycology to improve patient care and research worldwide: New leadership is about working together., Mycoses 2018 Nov; 61(11): 885-894.
• 2018
  Clave E, Araujo IL, Alanio C, Patin E, Bergstedt J, Urrutia A, Lopez-Lastra S, Li Y, Charbit B, MacPherson CR, Hasan M, Melo-Lima BL, Douay C, Saut N, Germain M, Trégouët DA, Morange PE, Fontes M, Duffy D, Di Santo JP, Quintana-Murci L, Albert ML, Toubert A, , , Human thymopoiesis is influenced by a common genetic variant within the TCRA-TCRD locus., Sci Transl Med 2018 Sep; 10(457): .
• 2018
  Scepanovic P, Alanio C, Hammer C, Hodel F, Bergstedt J, Patin E, Thorball CW, Chaturvedi N, Charbit B, Abel L, Quintana-Murci L, Duffy D, Albert ML, Fellay J, , , Human genetic variants and age are the strongest predictors of humoral immune responses to common pathogens and vaccines., Genome Med 2018 Jul; 10(1): 59.
• 2018
  Pilmis B, Garcia-Hermoso D, Alanio A, Catherinot E, Scemla A, Jullien V, Bretagne S, Lortholary O, , Failure of voriconazole therapy due to acquired azole resistance in Aspergillus fumigatus in a kidney transplant recipient with chronic necrotizing aspergillosis., Am. J. Transplant. 2018 09; 18(9): 2352-2355.
• 2018
  Chammard TB, Temfack E, Lortholary O, Alanio A, , Diagnostic and therapeutic strategies in cryptococcosis: impact on outcome., Mem. Inst. Oswaldo Cruz 2018 ; 113(7): e180050.
• 2018
  Hommel B, Mukaremera L, Cordero RJB, Coelho C, Desjardins CA, Sturny-Leclère A, Janbon G, Perfect JR, Fraser JA, Casadevall A, Cuomo CA, Dromer F, Nielsen K, Alanio A, , Titan cells formation in Cryptococcus neoformans is finely tuned by environmental conditions and modulated by positive and negative genetic regulators., PLoS Pathog 2018 05; 14(5): e1006982.
• 2018
  Colley T, Sehra G, Chowdhary A, Alanio A, Kelly SL, Kizawa Y, Armstrong-James D, Fisher MC, Warrilow AGS, Parker JE, Kelly DE, Kimura G, Nishimoto Y, Sunose M, Onions S, Crepin D, Lagasse F, Crittall M, Shannon J, McConville M, King-Underwood J, Naylor A, Bretagne S, Murray J, Ito K, Strong P, Rapeport G, , In Vitro and In Vivo Efficacy of a Novel and Long-Acting Fungicidal Azole, PC1244, on Aspergillus fumigatus Infection., Antimicrob. Agents Chemother. 2018 05; 62(5): .
• 2018
  Garcia-Hermoso D, Criscuolo A, Lee SC, Legrand M, Chaouat M, Denis B, Lafaurie M, Rouveau M, Soler C, Schaal JV, Mimoun M, Mebazaa A, Heitman J, Dromer F, Brisse S, Bretagne S, Alanio A, , Outbreak of Invasive Wound Mucormycosis in a Burn Unit Due to Multiple Strains of Mucor circinelloides f. circinelloides Resolved by Whole-Genome Sequencing., mBio 2018 04; 9(2): .
• 2018
  Patin E, Hasan M, Bergstedt J, Rouilly V, Libri V, Urrutia A, Alanio C, Scepanovic P, Hammer C, Jönsson F, Beitz B, Quach H, Lim YW, Hunkapiller J, Zepeda M, Green C, Piasecka B, Leloup C, Rogge L, Huetz F, Peguillet I, Lantz O, Fontes M, Di Santo JP, Thomas S, Fellay J, Duffy D, Quintana-Murci L, Albert ML, , , Natural variation in the parameters of innate immune cells is preferentially driven by genetic factors., Nat Immunol 2018 Mar; 19(3): 302-314.
• 2018
  Casadevall A, Coelho C, Alanio A, , Mechanisms of Cryptococcus neoformans-Mediated Host Damage., Front Immunol 2018 ; 9(): 855.
• 2018
  Pilmis B, Alanio A, Lortholary O, Lanternier F, , Recent advances in the understanding and management of mucormycosis., F1000Res 2018 ; 7(): .
• 2018
  Guigue N, Léon L, Hamane S, Gits-Muselli M, Le Strat Y, Alanio A, Bretagne S, , Corrigendum: Continuous Decline of Toxoplasma gondii Seroprevalence in Hospital: A 1997-2014 Longitudinal Study in Paris, France., Front Microbiol 2018 ; 9(): 2814.
• 2018
  Guigue N, Léon L, Hamane S, Gits-Muselli M, Le Strat Y, Alanio A, Bretagne S, , Continuous Decline of Toxoplasma gondii Seroprevalence in Hospital: A 1997-2014 Longitudinal Study in Paris, France., Front Microbiol 2018 ; 9(): 2369.
• 2017
  Baron M, Zini JM, Challan Belval T, Vignon M, Denis B, Alanio A, Malphettes M, , Fungal infections in patients treated with ibrutinib: two unusual cases of invasive aspergillosis and cryptococcal meningoencephalitis., Leuk. Lymphoma 2017 12; 58(12): 2981-2982.
• 2017
  Menotti J, Alanio A, Sturny-Leclère A, Vitry S, Sauvage F, Barratt G, Bretagne S, , A cell impedance-based real-time in vitro assay to assess the toxicity of amphotericin B formulations., Toxicol. Appl. Pharmacol. 2017 11; 334(): 18-23.
• 2017
  Rhodes J, Desjardins CA, Sykes SM, Beale MA, Vanhove M, Sakthikumar S, Chen Y, Gujja S, Saif S, Chowdhary A, Lawson DJ, Ponzio V, Colombo AL, Meyer W, Engelthaler DM, Hagen F, Illnait-Zaragozi MT, Alanio A, Vreulink JM, Heitman J, Perfect JR, Litvintseva AP, Bicanic T, Harrison TS, Fisher MC, Cuomo CA, , Tracing Genetic Exchange and Biogeography of Cryptococcus neoformans var. grubii at the Global Population Level., Genetics 2017 09; 207(1): 327-346.
• 2017
  Mallet V, Bruneau J, Zuber J, Alanio C, Leclerc-Mercier S, Roque-Afonso AM, Kraft ARM, Couronné L, Roulot D, Wedemeyer H, Albert ML, Hillon P, Laroche L, Pol S, Hermine O, , Hepatitis E virus-induced primary cutaneous CD30(+) T cell lymphoproliferative disorder., J. Hepatol. 2017 12; 67(6): 1334-1339.
• 2017
  Alanio A, Gits-Muselli M, Guigue N, Desnos-Ollivier M, Calderon EJ, Di Cave D, Dupont D, Hamprecht A, Hauser PM, Helweg-Larsen J, Kicia M, Lagrou K, Lengerova M, Matos O, Melchers WJG, Morio F, Nevez G, Totet A, White LP, Bretagne S, , Diversity of Pneumocystis jirovecii Across Europe: A Multicentre Observational Study., EBioMedicine 2017 Aug; 22(): 155-163.
• 2017
  Gits-Muselli M, Benderdouche M, Hamane S, Mingui A, Feuilhade de Chauvin M, Guigue N, Picat MQ, Bourrat E, Petit A, Bagot M, Alanio A, Bretagne S, , Continuous increase of Trichophyton tonsurans as a cause of tinea capitis in the urban area of Paris, France: a 5-year-long study., Med. Mycol. 2017 Jul; 55(5): 476-484.
• 2017
  Alanio A, Desnos-Ollivier M, Garcia-Hermoso D, Bretagne S, , Investigating Clinical Issues by Genotyping of Medically Important Fungi: Why and How?, Clin Microbiol Rev 2017 Jul; 30(3): 671-707.
• 2017
  Lafont E, Aguilar C, Vironneau P, Kania R, Alanio A, Poirée S, Lortholary O, Lanternier F, , [Fungal sinusitis]., Rev Mal Respir 2017 Jun; 34(6): 672-692.
• 2017
  Colley T, Alanio A, Kelly SL, Sehra G, Kizawa Y, Warrilow AGS, Parker JE, Kelly DE, Kimura G, Anderson-Dring L, Nakaoki T, Sunose M, Onions S, Crepin D, Lagasse F, Crittall M, Shannon J, Cooke M, Bretagne S, King-Underwood J, Murray J, Ito K, Strong P, Rapeport G, , In Vitro and In Vivo Antifungal Profile of a Novel and Long-Acting Inhaled Azole, PC945, on Aspergillus fumigatus Infection., Antimicrob. Agents Chemother. 2017 05; 61(5): .
• 2017
  Cordonnier C, Alanio A, Cesaro S, Maschmeyer G, Einsele H, Donnelly JP, Hauser PM, Lagrou K, Melchers WJ, Helweg-Larsen J, Matos O, Bretagne S, Maertens J, , , , Pneumocystis jirovecii pneumonia: still a concern in patients with haematological malignancies and stem cell transplant recipients-authors’ response., J. Antimicrob. Chemother. 2017 04; 72(4): 1266-1268.
• 2017
  Alanio A, Bretagne S, , Performance evaluation of multiplex PCR including Aspergillus-not so simple!, Med. Mycol. 2017 Jan; 55(1): 56-62.
• 2017
  Alanio A, Menotti J, Gits-Muselli M, Hamane S, Denis B, Rafoux E, Peffault de la Tour R, Touratier S, Bergeron A, Guigue N, Bretagne S, , Circulating Aspergillus fumigatus DNA Is Quantitatively Correlated to Galactomannan in Serum., Front Microbiol 2017 ; 8(): 2040.
• 2017
  Robin C, Alanio A, Gits-Muselli M, la Martire G, Schlemmer F, Botterel F, Angebault C, Leclerc M, Beckerich F, Redjoul R, Pautas C, Toma A, Maury S, Bretagne S, Cordonnier C, , Molecular Demonstration of a Pneumocystis Outbreak in Stem Cell Transplant Patients: Evidence for Transmission in the Daycare Center., Front Microbiol 2017 ; 8(): 700.
• 2017
  Alanio A, Bretagne S, , Challenges in microbiological diagnosis of invasive Aspergillus infections., F1000Res 2017 ; 6(): .
• 2017
  Alanio A, Bretagne S, , Pneumocystis jirovecii detection in asymptomatic patients: what does its natural history tell us?, F1000Res 2017 ; 6(): 739.
• 2016
  Legrand M, Gits-Muselli M, Boutin L, Garcia-Hermoso D, Maurel V, Soussi S, Benyamina M, Ferry A, Chaussard M, Hamane S, Denis B, Touratier S, Guigue N, Fréalle E, Jeanne M, Shaal JV, Soler C, Mimoun M, Chaouat M, Lafaurie M, Mebazaa A, Bretagne S, Alanio A, , Detection of Circulating Mucorales DNA in Critically Ill Burn Patients: Preliminary Report of a Screening Strategy for Early Diagnosis and Treatment., Clin. Infect. Dis. 2016 Nov; 63(10): 1312-1317.
• 2016
  Millon L, Herbrecht R, Grenouillet F, Morio F, Alanio A, Letscher-Bru V, Cassaing S, Chouaki T, Kauffmann-Lacroix C, Poirier P, Toubas D, Augereau O, Rocchi S, Garcia-Hermoso D, Bretagne S, , , Early diagnosis and monitoring of mucormycosis by detection of circulating DNA in serum: retrospective analysis of 44 cases collected through the French Surveillance Network of Invasive Fungal Infections (RESSIF)., Clin. Microbiol. Infect. 2016 Sep; 22(9): 810.e1-810.e8.
• 2016
  Maertens J, Cesaro S, Maschmeyer G, Einsele H, Donnelly JP, Alanio A, Hauser PM, Lagrou K, Melchers WJ, Helweg-Larsen J, Matos O, Bretagne S, Cordonnier C, , , ECIL guidelines for preventing Pneumocystis jirovecii pneumonia in patients with haematological malignancies and stem cell transplant recipients., J. Antimicrob. Chemother. 2016 09; 71(9): 2397-404.
• 2016
  Alanio A, Hauser PM, Lagrou K, Melchers WJ, Helweg-Larsen J, Matos O, Cesaro S, Maschmeyer G, Einsele H, Donnelly JP, Cordonnier C, Maertens J, Bretagne S, , , ECIL guidelines for the diagnosis of Pneumocystis jirovecii pneumonia in patients with haematological malignancies and stem cell transplant recipients., J. Antimicrob. Chemother. 2016 09; 71(9): 2386-96.
• 2016
  Cordonnier C, Cesaro S, Maschmeyer G, Einsele H, Donnelly JP, Alanio A, Hauser PM, Lagrou K, Melchers WJ, Helweg-Larsen J, Matos O, Bretagne S, Maertens J, , , Pneumocystis jirovecii pneumonia: still a concern in patients with haematological malignancies and stem cell transplant recipients., J. Antimicrob. Chemother. 2016 09; 71(9): 2379-85.
• 2016
  Tauziède-Espariat A, Wassef M, Adle-Biassette H, Alanio A, Bretagne S, Lanternier F, Boui M, Bouchaud O, Vironneau P, Kania R, Jouvion G, Chrétien F, Classe M, , [Sinonasal fungal infections are not exclusively due to mucorales and Aspergillus!]., Ann Pathol 2016 Aug; 36(4): 245-51.
• 2016
  Alanio A, Denis B, Hamane S, Raffoux E, Peffault de la Tour R, Touratier S, Bergeron A, Bretagne S, , New therapeutic strategies for invasive aspergillosis in the era of azole resistance: how should the prevalence of azole resistance be defined?, J. Antimicrob. Chemother. 2016 08; 71(8): 2075-8.
• 2016
  Alanio A, Sturny-Leclère A, Benabou M, Guigue N, Bretagne S, , Variation in copy number of the 28S rDNA of Aspergillus fumigatus measured by droplet digital PCR and analog quantitative real-time PCR., J. Microbiol. Methods 2016 08; 127(): 160-163.
• 2016
  Marchionni E, Parize P, Lefevre A, Vironneau P, Bougnoux ME, Poiree S, Coignard-Biehler H, DeWolf SE, Amazzough K, Barchiesi F, Jullien V, Alanio A, Garcia-Hermoso D, Wassef M, Kania R, Lortholary O, Lanternier F, , Aspergillus spp. invasive external otitis: favourable outcome with a medical approach., Clin. Microbiol. Infect. 2016 May; 22(5): 434-7.
• 2016
  Bamba S, Halos L, Tarnagda Z, Alanio A, Macé P, Moukoury S, Sangaré I, Guiguemdé R, Costa JM, Bretagne S, , Seroprevalence of Toxoplasma gondii and direct genotyping using minisequencing in free-range pigs in Burkina Faso., Int. J. Food Microbiol. 2016 Aug; 230(): 10-5.
• 2016
  Gaube G, De Castro N, Gueguen A, Lascoux C, Zagdanski AM, Alanio A, Molina JM, , Treatment with adalimumab for severe immune reconstitution inflammatory syndrome in an HIV-infected patient presenting with cryptococcal meningitis., Med Mal Infect 2016 May; 46(3): 154-6.
• 2016
  Alanio A, Gits-Muselli M, Mercier-Delarue S, Dromer F, Bretagne S, , Diversity of Pneumocystis jirovecii during Infection Revealed by Ultra-Deep Pyrosequencing., Front Microbiol 2016 ; 7(): 733.
• 2016
  Dellière S, Healey K, Gits-Muselli M, Carrara B, Barbaro A, Guigue N, Lecefel C, Touratier S, Desnos-Ollivier M, Perlin DS, Bretagne S, Alanio A, , Fluconazole and Echinocandin Resistance of Candida glabrata Correlates Better with Antifungal Drug Exposure Rather than with MSH2 Mutator Genotype in a French Cohort of Patients Harboring Low Rates of Resistance., Front Microbiol 2016 ; 7(): 2038.
• 2016
  Valero C, Buitrago MJ, Gits-Muselli M, Benazra M, Sturny-Leclère A, Hamane S, Guigue N, Bretagne S, Alanio A, , Copy Number Variation of Mitochondrial DNA Genes in Pneumocystis jirovecii According to the Fungal Load in BAL Specimens., Front Microbiol 2016 ; 7(): 1413.
• 2016
  Alanio A, Denis B, Hamane S, Raffoux E, Peffault de Latour R, Menotti J, Amorim S, Touratier S, Bergeron A, Bretagne S, Azole Resistance of Aspergillus fumigatus in Immunocompromised Patients with Invasive Aspergillosis, Emerging Infect. Dis. 2016 Jan;22(1):157-8.
• 2015
  Cazorla A, Alanio A, Bretagne S, Polivka M, Shaar-Chneker C, Kaci R, Brouland JP, Chrétien F, Jouvion G, , [Cryptococcus where they are not expected: Five case reports of extra-cerebral and extra-pulmonary cryptococcosis]., Ann Pathol 2015 Dec; 35(6): 479-85.
• 2015
  Alanio A, Bretagne S, [NEW STRATEGIES FOR THE MICROBIOLOGICAL DIAGNOSIS OF VISCERAL MYCOSES], Rev Prat 2015 Dec;65(10):1325-9.
• 2015
  Alanio A, Garcia-Hermoso D, Criscuolo A, Legrand M, Chaouat M, Denis B, Lafaurie M, Rouveau M, Soler C, Mimoun M, Mebazaa A, Dromer F, Brisse S, Bretagne S, Whole genome sequencing to investigate an outbreak of mucormycosis in a burn unit, Mycoses 2015 Oct;58(S4):23-23.
• 2015
  Danion F, Aguilar C, Catherinot E, Alanio A, DeWolf S, Lortholary O, Lanternier F, , Mucormycosis: New Developments into a Persistently Devastating Infection., Semin Respir Crit Care Med 2015 Oct; 36(5): 692-705.
• 2015
  Garcia-Hermoso D, Alanio A, Cabaret O, Olivi M, Foulet F, Cordonnier C, Costa JM, Bretagne S, , High diversity of non-sporulating moulds in respiratory specimens of immunocompromised patients: should all the species be reported when diagnosing invasive aspergillosis?, Mycoses 2015 Sep; 58(9): 557-64.
• 2015
  D Garcia-Hermoso, A Criscuolo, M Legrande, M Chaouat, B Denis, M Lafaurie, M Rouveau, C Soler, M Mimoun, A Mebazaa, F Dromer, S Brisse, S Bretagne, A Alanio, Épidémie de mucormycose dans un centre de traitement des brûlés : des biomarqueurs diagnostiques au séquençage complets des souches, J. Myc. Med. 2015 Sep; 25(3):219.
• 2015
  Alanio A, Garcia-Hermoso D, Mercier-Delarue S, Lanternier F, Gits-Muselli M, Menotti J, Denis B, Bergeron A, Legrand M, Lortholary O, Bretagne S, , , Molecular identification of Mucorales in human tissues: contribution of PCR electrospray-ionization mass spectrometry., Clin. Microbiol. Infect. 2015 Jun; 21(6): 594.e1-5.
• 2015
  Colombier MA, Alanio A, Denis B, Melica G, Garcia-Hermoso D, Levy B, Peraldi MN, Glotz D, Bretagne S, Gallien S, , Dual Invasive Infection with Phaeoacremonium parasiticum and Paraconiothyrium cyclothyrioides in a Renal Transplant Recipient: Case Report and Comprehensive Review of the Literature of Phaeoacremonium Phaeohyphomycosis., J. Clin. Microbiol. 2015 Jul; 53(7): 2084-94.
• 2015
  Thomas S, Rouilly V, Patin E, Alanio C, Dubois A, Delval C, Marquier LG, Fauchoux N, Sayegrih S, Vray M, Duffy D, Quintana-Murci L, Albert ML, , , The Milieu Intérieur study – an integrative approach for study of human immunological variance., Clin Immunol 2015 Apr; 157(2): 277-93.
• 2015
  Guigue N, Alanio A, Menotti J, Castro ND, Hamane S, Peyrony O, LeGoff J, Bretagne S, , Utility of adding Pneumocystis jirovecii DNA detection in nasopharyngeal aspirates in immunocompromised adult patients with febrile pneumonia., Med. Mycol. 2015 Apr; 53(3): 241-7.
• 2015
  Alanio A, Vernel-Pauillac F, Sturny-Leclère A, Dromer F, Cryptococcus neoformans host adaptation: toward biological evidence of dormancy, MBio 2015;6(2).
• 2015
  Ressaire Q, Padoin C, Chaouat M, Maurel V, Alanio A, Ferry A, Soussi S, Benyamina M, Denis B, Mimoun M, Mebazaa A, Legrand M, Muscle diffusion of liposomal amphotericin B and posaconazole in critically ill burn patients receiving continuous hemodialysis, Intensive Care Med 2015 May;41(5):948-9.
• 2015
  Heiblig M, Bozzoli V, Saison J, Thomas X, De Croze D, Traverse-Glehen A, Cosmidis A, Chidiac C, Ferry T, Alanio A, Bienvenu AL, Dupont D, Ducastelle-Lepretre S, Michallet M, Ader F, , Combined medico-surgical strategy for invasive sino-orbito-cerebral breakthrough fungal infection with Hormographiella aspergillata in an acute leukaemia patient, Mycoses 2015 May;58(5):308-12.
• 2015
  Gits-Muselli M, Peraldi MN, de Castro N, Delcey V, Menotti J, Guigue N, Hamane S, Raffoux E, Bergeron A, Valade S, Molina JM, Bretagne S, Alanio A, , New Short Tandem Repeat-Based Molecular Typing Method for Pneumocystis jirovecii Reveals Intrahospital Transmission between Patients from Different Wards., PLoS ONE 2015 ; 10(5): e0125763.
• 2015
  Guigue N, Lardeux S, Alanio A, Hamane S, Tabouret M, Bretagne S, , Importance of operational factors in the reproducibility of Aspergillus galactomannan enzyme immune assay., PLoS ONE 2015 ; 10(4): e0124044.
• 2014
  Robin C, Alanio A, Cordonnier C, , Mucormycosis: a new concern in the transplant ward?, Curr. Opin. Hematol. 2014 Nov; 21(6): 482-90.
• 2014
  Desnos-Ollivier M, Blanc C, Garcia-Hermoso D, Hoinard D, Alanio A, Dromer F, , Misidentification of Saprochaete clavata as Magnusiomyces capitatus in clinical isolates: utility of internal transcribed spacer sequencing and matrix-assisted laser desorption ionization-time of flight mass spectrometry and importance of reliable databases., J Clin Microbiol 2014 Jun; 52(6): 2196-8.
• 2014
  Alanio A, Bretagne S, , Difficulties with molecular diagnostic tests for mould and yeast infections: where do we stand?, Clin. Microbiol. Infect. 2014 Jun; 20 Suppl 6(): 36-41.
• 2014
  de Fontbrune FS, Denis B, Meunier M, Garcia-Hermoso D, Bretagne S, Alanio A, Iterative breakthrough invasive aspergillosis due to TR(34) /L98H azole-resistant Aspergillus fumigatus and Emericella sublata in a single hematopoietic stem cell transplant patient, Transpl Infect Dis 2014 Aug;16(4):687-91.
• 2014
  Cordonnier C, Robin C, Alanio A, Bretagne S, Antifungal pre-emptive strategy for high-risk neutropenic patients: why the story is still ongoing, Clin. Microbiol. Infect. 2014 Jun;20 Suppl 6:27-35.
• 2013
  Costa JM, Alanio A, Moukoury S, Clairet V, Debruyne M, Poveda JD, Bretagne S, , Direct genotyping of Toxoplasma gondii from amniotic fluids based on B1 gene polymorphism using minisequencing analysis., BMC Infect. Dis. 2013 Nov; 13(): 552.
• 2012
  Alanio A, Cabaret O, Sitterlé E, Costa JM, Brisse S, Cordonnier C, Bretagne S, , Azole preexposure affects the Aspergillus fumigatus population in patients., Antimicrob. Agents Chemother. 2012 Sep; 56(9): 4948-50.
• 2012
  Planche V, Ducroz S, Alanio A, Bougnoux ME, Lortholary O, Dannaoui E, In vitro combination of anidulafungin and voriconazole against intrinsically azole-susceptible and -resistant Aspergillus spp, Antimicrob. Agents Chemother. 2012 Aug;56(8):4500-3.
• 2011
  Alanio A, Beretti JL, Dauphin B, Mellado E, Quesne G, Lacroix C, Amara A, Berche P, Nassif X, Bougnoux ME, Matrix-assisted laser desorption ionization time-of-flight mass spectrometry for fast and accurate identification of clinically relevant Aspergillus species, Clin. Microbiol. Infect. 2011 May;17(5):750-5.
• 2011
  Alanio A, Desoubeaux G, Sarfati C, Hamane S, Bergeron A, Azoulay E, Molina JM, Derouin F, Menotti J, Real-time PCR assay-based strategy for differentiation between active Pneumocystis jirovecii pneumonia and colonization in immunocompromised patients, Clin. Microbiol. Infect. 2011 Oct;17(10):1531-7.
• 2011
  Alanio A, Desnos-Ollivier M, Dromer F, , Dynamics of Cryptococcus neoformans-macrophage interactions reveal that fungal background influences outcome during cryptococcal meningoencephalitis in humans., mBio 2011 ; 2(4): .
• 2010
  Alanio A, Sitterlé E, Liance M, Farrugia C, Foulet F, Botterel F, Hicheri Y, Cordonnier C, Costa JM, Bretagne S, , Low prevalence of resistance to azoles in Aspergillus fumigatus in a French cohort of patients treated for haematological malignancies., J. Antimicrob. Chemother. 2011 Feb; 66(2): 371-4.
• 2010
  Alanio A, Romand S, Penso-Assathiany D, Foulet F, Botterel F, , Microsporum praecox: molecular identification of a new case and review of the literature., Mycopathologia 2011 Jan; 171(1): 61-5.
• 2010
  Ferroni A, Suarez S, Beretti JL, Dauphin B, Bille E, Meyer J, Bougnoux ME, Alanio A, Berche P, Nassif X, , Real-time identification of bacteria and Candida species in positive blood culture broths by matrix-assisted laser desorption ionization-time of flight mass spectrometry., J. Clin. Microbiol. 2010 May; 48(5): 1542-8.
• 2009
  Marinach C, Alanio A, Palous M, Kwasek S, Fekkar A, Brossas JY, Brun S, Snounou G, Hennequin C, Sanglard D, Datry A, Golmard JL, Mazier D, MALDI-TOF MS-based drug susceptibility testing of pathogens: the example of Candida albicans and fluconazole, Proteomics 2009 Oct;9(20):4627-31.
• 2008
  Alanio A, Brethon B, Feuilhade de Chauvin M, de Kerviler E, Leblanc T, Lacroix C, Baruchel A, Menotti J, Invasive pulmonary infection due to Trichoderma longibrachiatum mimicking invasive Aspergillosis in a neutropenic patient successfully treated with voriconazole combined with caspofungin, Clin. Infect. Dis. 2008 May;46(10):e116-8.