Cours
Introduction to data analysis
This five weeks graduate level course will give participants basic skills and hands-on training in biostatistics. It will cover all the steps of an analysis workflow : design, collection, curation, hypothesis testing and data […]
Introduction to Data Analysis
This four-week graduate level course will give participants basic skills and hands-on training in statistics and descriptive data analysis. This course is (primarily) dedicated to first year PhD students of the Institut Pasteur (each […]
Introduction to Data Analysis
This four-week graduate level course will give participants basic skills and hands-on training in statistics and descriptive data analysis. This course is (primarily) dedicated to first year PhD students of the Institut Pasteur (each […]
Projets
Logiciel
Outils
Anciennes Équipes
CV
Professional experiences
2016 – presentResearch Engineer, Institut Pasteur
2005 – 2016Associate Professor (Maître de Conférences), UPMC & Institut Curie
2003 – 2004Associate Professor, UPMC & Institut Jacques Monod
2001 – 2003Assistant Professor (ATER), UPMC & Institut Jacques Monod
Education
2013Research Leader grade (HDR), Université Pierre et Marie Curie (UPMC, Paris VI)
2001PhD in Human Genetics, Université Paris VII & Institut Gustave Roussy
1995DEA Genetic ressources and plant improvement, Université Paris XI
1994Magistère de Génétique, Université Paris VII
Publications
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2025Phages with a broad host range are common across ecosystems., Nat Microbiol 2025 Oct; 10(10): 2537-2549.
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2025Antibody-secreting cell repertoires hold high-affinity anti-rocuronium specificities that can induce anaphylaxis in vivo., J Allergy Clin Immunol 2025 Jan; (): .
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2024Rocuronium-specific antibodies drive perioperative anaphylaxis but can also function as reversal agents in preclinical models., Sci Transl Med 2024 Sep; 16(764): eado4463.
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2024Integron cassettes integrate into bacterial genomes via widespread non-classical attG sites., Nat Microbiol 2024 Jan; 9(1): 228-240.
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2022Chlamydia trachomatis development requires both host glycolysis and oxidative phosphorylation but has only minor effects on these pathways., J Biol Chem 2022 Aug; 298(9): 102338.
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2022Genome-wide mapping of individual replication fork velocities using nanopore sequencing., Nat Commun 2022 06; 13(1): 3295.
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2022High-affinity autoreactive plasma cells disseminate through multiple organs in patients with immune thrombocytopenic purpura., J Clin Invest 2022 May; (): .
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2021Immune response profiling of patients with spondyloarthritis reveals signalling networks mediating TNF-blocker function in vivo., Ann Rheum Dis 2021 Apr; 80(4): 475-486.
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2021MetaHiC phage-bacteria infection network reveals active cycling phages of the healthy human gut., Elife 2021 Feb; 10(): .
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2020Serpentine: a flexible 2D binning method for differential Hi-C analysis., Bioinformatics 2020 Jun; 36(12): 3645-3651.
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