Timeline
Jean-Yves Coppee
Permanent Researcher
13 Jun 2023
publication
Coregulation of extracellular vesicle production and fluconazole susceptibility in Cryptococcus neoformans
Read more05 Nov 2022
publication
Systematic transcriptome analysis allows the identification of new type I and type II Toxin/Antitoxin systems located in the superintegron of Vibrio cholerae.
Read more15 Apr 2022
news
A recent study by the team of Laurent Debarbieux has been highlighted in the BIP (15/04/2022)
Read more13 Apr 2022
publication
The gut environment regulates bacterial gene expression which modulates susceptibility to bacteriophage infection.
Read more25 Feb 2022
08 Feb 2022
publication
RNA Sequencing Reveals Widespread Transcription of Natural Antisense RNAs in Entamoeba Species
Read more01 Dec 2021
publication
The oxidative stress response of pathogenic Leptospira is controlled by two peroxide stress regulators which putatively cooperate in controlling virulence.
Read more22 Oct 2021
publication
Sleeping ribosomes: Bacterial signaling triggers RaiA mediated persistence to aminoglycosides.
Read more17 Oct 2021
publication
Role of the major determinant of polar flagellation FlhG in the endoflagella-containing spirochete Leptospira.
Read more09 Mar 2021
publication
Queuine Is a Nutritional Regulator of Entamoeba histolytica Response to Oxidative Stress and a Virulence Attenuator.
Read more12 Jan 2021
08 Jan 2021
project
Understanding the Pathogenicity of Entamoeba Using Comparative Transcriptomics and Phylogenomics – GENAMIBE. Project-ANR-10-GENM-0011
Read more02 Dec 2020
publication
4-Methylcytosine DNA modification is critical for global epigenetic regulation and virulence in the human pathogen Leptospira interrogans.
Read more19 Nov 2020
publication
Genomic determinants for initiation and length of natural antisense transcripts in Entamoeba histolytica.
Read more09 Oct 2020
publication
Effect of arsenite and growth in biofilm conditions on the evolution of Thiomonas sp. CB2.
Read more06 Oct 2020
publication
The transcriptional response of pathogenic Leptospira to peroxide reveals new defenses against infection-related oxidative stress.
Read more01 Aug 2020
02 Jun 2020
publication
Human Immune Response Triggered by Entamoeba histolytica in a 3D-Intestinal Model
Read more14 May 2020
04 May 2020
13 Apr 2020
publication
Transcytosis subversion by M cell-to-enterocyte spread promotes Shigella flexneri and Listeria monocytogenes intracellular bacterial dissemination
Read more01 Jan 2020
publication
Leishmania amazonensis Subverts the Transcription Factor Landscape in Dendritic Cells to Avoid Inflammasome Activation and Stall Maturation.
Read more08 Nov 2019
publication
Mycobacterium abscessus virulence traits unraveled by transcriptomic profiling in amoeba and macrophages
Read more21 Oct 2019
publication
Non-specific interference of cobalt with siderophore-dependent iron uptake pathways
Read more15 May 2019
publication
Transcriptional profiling of a laboratory and clinical Mycobacterium tuberculosis strain suggests respiratory poisoning upon exposure to delamanid
Read more25 Aug 2018
publication
checkMyIndex: a web-based R/Shiny interface for choosing compatible sequencing indexes
Read more06 Jul 2018
publication
Enzymatic synthesis of random sequences of RNA and RNA analogues by DNA polymerase theta mutants for the generation of aptamer libraries
Read more13 Jun 2018
publication
Enteric bacteria boost defences against oxidative stress in Entamoeba histolytica
Read more21 May 2018
publication
Expansion of the SOS regulon of Vibrio cholerae through extensive transcriptome analysis and experimental validation
Read more25 Oct 2017
publication
An ApiAP2 member regulates expression of clonally variant genes of the human malaria parasite Plasmodium falciparum
Read more19 Oct 2017
31 Mar 2017
publication
Rae1/YacP, a new endoribonuclease involved in ribosome-dependent mRNA decay in Bacillus subtilis
Read more01 Mar 2017
07 Feb 2017
publication
Comparison of biofilm formation and motility processes in arsenic-resistant Thiomonas spp. strains revealed divergent response to arsenite
Read more02 Feb 2017
project
Deciphering the virulence factors of Mycobacterium abscessus activated in the presence of environmental amoebae
Read more01 Feb 2017
publication
The Legionella pneumophila genome evolved to accommodate multiple regulatory mechanisms controlled by the CsrA-system.
Read more31 Jan 2017
project
Transcriptome of different quiescence sub-states of neural stem cells in adult zebrafish
Read more31 Jan 2017
27 Jan 2017
21 Oct 2016
publication
Extensive transcriptome analysis correlates the plasticity of Entamoeba histolytica pathogenesis to rapid phenotype changes depending on the environment
Read more15 Jun 2016
publication
GH16 and GH81 family β-(1,3)-glucanases in Aspergillus fumigatus are essential for conidial cell wall morphogenesis
Read more09 Jun 2016
publication
SARTools: A DESeq2- and EdgeR-Based R Pipeline for Comprehensive Differential Analysis of RNA-Seq Data
Read more18 May 2016
18 May 2016
26 Apr 2016
20 Apr 2016
20 Apr 2016
24 Mar 2016
publication
Comparative analysis of viral RNA signatures on different RIG-I-like receptors
Read more04 Jan 2016
publication
RNase J depletion leads to massive changes in mRNA abundance in Helicobacter pylori.
Read more20 Oct 2015
publication
Normal and Cystic Fibrosis Human Bronchial Epithelial Cells Infected with Pseudomonas aeruginosa Exhibit Distinct Gene Activation Patterns
Read more01 Oct 2015
01 Oct 2015
28 Sep 2015
publication
The PfAlba1 RNA-binding protein is an important regulator of translational timing in Plasmodium falciparum blood stages
Read more24 Sep 2015
18 Sep 2015
project
A personal database system for large scale quantitative results exploration (Cassandre, PTR 463)
Read more14 Sep 2015
10 Sep 2015
project
Role of neuronal, microglial and glial cells during rabies virus infection in the modulation of innate immune response: MIME-RAB
Read more08 Sep 2015
project
Dynamic regulation of chromatin and transcription by HP1 Heterochromatin Proteins in relationship with RNA.
Read more16 Jul 2015
18 Mar 2015
13 Mar 2015
04 Feb 2015
31 Jan 2015
project
Régulation transcriptionnelle par l’Enhancer de Trithorax et Polycomb Corto et la Protéine Ribosomique L12.
Read more10 Jan 2015
publication
Repressor activity of the RpoS/σS-dependent RNA polymerase requires DNA binding
Read more05 Dec 2014
publication
Differences in gene transcriptomic pattern of Plasmodium falciparum in children with cerebral malaria and asymptomatic carriers
Read more12 May 2014
publication
DYRK1A phoshorylates histone H3 to differentially regulate the binding of HP1 isoforms and antagonize HP1-mediated transcriptional repression
Read more08 May 2014
publication
Expanding the RpoS/σS-network by RNA sequencing and identification of σS-controlled small RNAs in Salmonella
Read more03 Apr 2014
publication
Identified members of the Streptomyces lividans AdpA regulon involved in differentiation and secondary metabolism
Read more31 Mar 2014
publication
A putative regulatory genetic locus modulates virulence in the pathogen Leptospira interrogans
Read more05 Mar 2014
publication
Extracellular adenosine triphosphate affects the response of human macrophages infected with Mycobacterium tuberculosis
Read more22 Feb 2014
publication
Strand-specific RNA-Seq reveals widespread and developmentally regulated transcription of natural antisense transcripts in Plasmodium falciparum
Read more19 Dec 2013
publication
Identification of the virulence landscape essential for Entamoeba histolytica invasion of the human colon
Read more04 Oct 2013
publication
Induction of the Cpx envelope stress pathway contributes to Escherichia coli tolerance to antimicrobial peptides
Read more17 Sep 2013
publication
Identification and characterization of the genetic changes responsible for the characteristic smooth-to-rough morphotype alterations of clinically persistent Mycobacterium abscessus
Read more01 Aug 2013
22 May 2013
09 May 2013
publication
Genome-wide identification of regulatory RNAs in the human pathogen Clostridium difficile
Read more01 Apr 2013
01 Feb 2013
publication
Quantification of stochastic noise of splicing and polyadenylation in Entamoeba histolytica
Read more03 Jan 2013
publication
Starvation, together with the SOS response, mediates high biofilm-specific tolerance to the fluoroquinolone ofloxacin
Read more01 Jan 2013
publication
Life in an arsenic-containing gold mine: genome and physiology of the autotrophic arsenite-oxidizing bacterium rhizobium sp. NT-26
Read more13 Dec 2012
publication
Distinct transcriptional signatures of bone marrow-derived C57BL/6 and DBA/2 dendritic leucocytes hosting live Leishmania amazonensis amastigotes
Read more21 Nov 2012
publication
Dicer-2- and Piwi-mediated RNA interference in Rift Valley fever virus-infected mosquito cells
Read more16 Aug 2012
publication
RNA sequencing revealed novel actors of the acquisition of drug resistance in Candida albicans
Read more01 Apr 2012
publication
Deep sequencing defines the transcriptional map of L. pneumophila and identifies growth phase-dependent regulated ncRNAs implicated in virulence
Read more12 Mar 2012
publication
Human cryptochrome-1 confers light independent biological activity in transgenic Drosophila correlated with flavin radical stability
Read more24 Feb 2012
publication
Endoplasmic reticulum stress-sensing mechanism is activated in Entamoeba histolytica upon treatment with nitric oxide
Read more24 Feb 2012
publication
Myf5 haploinsufficiency reveals distinct cell fate potentials for adult skeletal muscle stem cells
Read more27 Dec 2011
publication
Naive and primed murine pluripotent stem cells have distinct miRNA expression profiles
Read more29 Sep 2011
publication
Genome-wide analysis of heteroduplex DNA in mismatch repair-deficient yeast cells reveals novel properties of meiotic recombination pathways
Read more27 Aug 2011
04 Apr 2011
publication
Artesunate tolerance in transgenic Plasmodium falciparum parasites overexpressing a tryptophan-rich protein
Read more13 Jan 2011
publication
Microarray estimation of genomic inter-strain variability in the genus Ectocarpus (Phaeophyceae)
Read more05 Jan 2011
publication
Overexpression of proinflammatory TLR-2-signalling lipoproteins in hypervirulent mycobacterial variants
Read more17 Dec 2010
publication
Temporal transcriptomic response during arsenic stress in Herminiimonas arsenicoxydans
Read more10 Jun 2010
publication
From array-based hybridization of Helicobacter pylori isolates to the complete genome sequence of an isolate associated with MALT lymphoma.
Read more10 Jun 2010
publication
From array-based hybridization of Helicobacter pylori isolates to the complete genome sequence of an isolate associated with MALT lymphoma
Read more01 Mar 2010
publication
Decreased in vitro susceptibility of Plasmodium falciparum isolates to artesunate, mefloquine, chloroquine, and quinine in Cambodia from 2001 to 2007
Read more26 Feb 2010
18 Feb 2010
publication
Multiple controls affect arsenite oxidase gene expression in Herminiimonas arsenicoxydans
Read more30 Nov 2009
publication
The endogenous siRNA pathway is involved in heterochromatin formation in Drosophila
Read more15 Oct 2009
publication
FlexiChip package: an universal microarray with a dedicated analysis software for high-thoughput SNPs detection linked to anti-malarial drug resistance
Read more03 Aug 2009
publication
The global regulator CodY regulates toxin gene expression in Bacillus anthracis and is required for full virulence
Read more31 Jul 2009
publication
Identification of brevibacteriaceae by multilocus sequence typing and comparative genomic hybridization analyses
Read more10 Jul 2009
publication
Unusual composition of a yeast chromosome arm is associated with its delayed replication
Read more18 Jun 2009
08 Jun 2009
publication
CymR, the master regulator of cysteine metabolism in Staphylococcus aureus, controls host sulphur source utilization and plays a role in biofilm formation
Read more20 Mar 2009
publication
Transcriptional signatures of BALB/c mouse macrophages housing multiplying Leishmania amazonensis amastigotes
Read more23 Feb 2009
publication
Field-based evidence of fast and global increase of Plasmodium falciparum drug-resistance by DNA-microarrays and PCR/RFLP in Niger
Read more06 Dec 2008
publication
Genomic polymorphism in the population of Candida glabrata: gene copy-number variation and chromosomal translocations
Read more25 Sep 2008
publication
Enhanced structural and functional genome elucidation of the arsenite-oxidizing strain Herminiimonas arsenicoxydans by proteomics data
Read more16 Sep 2008
publication
Transcriptomic analysis of the exit from dormancy of Aspergillus fumigatus conidia
Read more18 Aug 2008
publication
Dynamic RNA profiling in Plasmodium falciparum synchronized blood stages exposed to lethal doses of artesunate
Read more09 Jul 2008
16 Apr 2008
publication
Chemotaxis of Entamoeba histolytica towards the pro-inflammatory cytokine TNF is based on PI3K signalling, cytoskeleton reorganization and the Galactose/N-acetylgalactosamine lectin activity
Read more01 Apr 2008
publication
AffyGCQC: a web-based interface to detect outlying genechips with extreme studentized deviate tests
Read more26 Mar 2008
publication
Plasmodium falciparum transcriptome analysis reveals pregnancy malaria associated gene expression
Read more25 Oct 2007
publication
Whole-transcriptome analysis of Plasmodium falciparum field isolates: identification of new pathogenicity factors
Read more01 Oct 2007
publication
Long oligonucleotide microarrays for African green monkey gene expression profile analysis.
Read more05 Sep 2007
publication
Rapid microarray-based method for monitoring of all currently known single-nucleotide polymorphisms associated with parasite resistance to antimalaria drugs
Read more01 Sep 2007
publication
Transcriptome analysis of Yersinia pestis in human plasma: an approach for discovering bacterial genes involved in septicaemic plague.
Read more17 Aug 2007
publication
The lysine- and glutamic acid-rich protein KERP1 plays a role in Entamoeba histolytica liver abscess pathogenesis
Read more03 Aug 2007
01 Jan 2007
01 Aug 2006
publication
Virulence strategies for infecting phagocytes deduced from the in vivo transcriptional program of Legionella pneumophila
Read more01 May 2006
publication
Stress by heat shock induces massive down regulation of genes and allows differential allelic expression of the Gal/GalNAc lectin in Entamoeba histolytica
Read more15 Jan 2006
publication
Anti-inflammatory effect of Lactobacillus casei on Shigella-infected human intestinal epithelial cells
Read more31 Oct 2005
publication
Transcriptome analysis of antigenic variation in Plasmodium falciparum–var silencing is not dependent on antisense RNA
Read more13 May 2005
01 Jan 2005
publication
Adherence modifies the regulation of gene expression induced by interleukin-10
Read more01 Jan 2004
publication
GadE (YhiE): a novel activator involved in the response to acid environment in Escherichia coli
Read more01 Mar 2003
publication