Ligne de temps
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Jean-Yves Coppee
Chercheur(euse) Permanent(e)
01 juil. 2024
publication
Alternative TSS use is widespread in Cryptococcus fungi in response to environmental cues and regulated genome-wide by the transcription factor Tur1.
Lire plus13 juin 2023
publication
Coregulation of extracellular vesicle production and fluconazole susceptibility in Cryptococcus neoformans
Lire plus05 nov. 2022
publication
Systematic transcriptome analysis allows the identification of new type I and type II Toxin/Antitoxin systems located in the superintegron of Vibrio cholerae.
Lire plus15 avr. 2022
news
A recent study by the team of Laurent Debarbieux has been highlighted in the BIP (15/04/2022)
Lire plus13 avr. 2022
publication
The gut environment regulates bacterial gene expression which modulates susceptibility to bacteriophage infection.
Lire plus25 févr. 2022
08 févr. 2022
publication
RNA Sequencing Reveals Widespread Transcription of Natural Antisense RNAs in Entamoeba Species
Lire plus01 déc. 2021
publication
The oxidative stress response of pathogenic Leptospira is controlled by two peroxide stress regulators which putatively cooperate in controlling virulence.
Lire plus22 oct. 2021
publication
Sleeping ribosomes: Bacterial signaling triggers RaiA mediated persistence to aminoglycosides.
Lire plus17 oct. 2021
publication
Role of the major determinant of polar flagellation FlhG in the endoflagella-containing spirochete Leptospira.
Lire plus09 mars 2021
publication
Queuine Is a Nutritional Regulator of Entamoeba histolytica Response to Oxidative Stress and a Virulence Attenuator.
Lire plus12 janv. 2021
08 janv. 2021
project
Understanding the Pathogenicity of Entamoeba Using Comparative Transcriptomics and Phylogenomics – GENAMIBE. Project-ANR-10-GENM-0011
Lire plus02 déc. 2020
publication
4-Methylcytosine DNA modification is critical for global epigenetic regulation and virulence in the human pathogen Leptospira interrogans.
Lire plus19 nov. 2020
publication
Genomic determinants for initiation and length of natural antisense transcripts in Entamoeba histolytica.
Lire plus09 oct. 2020
publication
Effect of arsenite and growth in biofilm conditions on the evolution of Thiomonas sp. CB2.
Lire plus06 oct. 2020
publication
The transcriptional response of pathogenic Leptospira to peroxide reveals new defenses against infection-related oxidative stress.
Lire plus01 août 2020
02 juin 2020
publication
Human Immune Response Triggered by Entamoeba histolytica in a 3D-Intestinal Model
Lire plus14 mai 2020
04 mai 2020
13 avr. 2020
publication
Transcytosis subversion by M cell-to-enterocyte spread promotes Shigella flexneri and Listeria monocytogenes intracellular bacterial dissemination
Lire plus01 janv. 2020
publication
Leishmania amazonensis Subverts the Transcription Factor Landscape in Dendritic Cells to Avoid Inflammasome Activation and Stall Maturation.
Lire plus08 nov. 2019
publication
Mycobacterium abscessus virulence traits unraveled by transcriptomic profiling in amoeba and macrophages
Lire plus21 oct. 2019
publication
Non-specific interference of cobalt with siderophore-dependent iron uptake pathways
Lire plus15 mai 2019
publication
Transcriptional profiling of a laboratory and clinical Mycobacterium tuberculosis strain suggests respiratory poisoning upon exposure to delamanid
Lire plus25 août 2018
publication
checkMyIndex: a web-based R/Shiny interface for choosing compatible sequencing indexes
Lire plus06 juil. 2018
publication
Enzymatic synthesis of random sequences of RNA and RNA analogues by DNA polymerase theta mutants for the generation of aptamer libraries
Lire plus13 juin 2018
publication
Enteric bacteria boost defences against oxidative stress in Entamoeba histolytica
Lire plus21 mai 2018
publication
Expansion of the SOS regulon of Vibrio cholerae through extensive transcriptome analysis and experimental validation
Lire plus25 oct. 2017
publication
An ApiAP2 member regulates expression of clonally variant genes of the human malaria parasite Plasmodium falciparum
Lire plus19 oct. 2017
31 mars 2017
publication
Rae1/YacP, a new endoribonuclease involved in ribosome-dependent mRNA decay in Bacillus subtilis
Lire plus01 mars 2017
07 févr. 2017
publication
Comparison of biofilm formation and motility processes in arsenic-resistant Thiomonas spp. strains revealed divergent response to arsenite
Lire plus02 févr. 2017
project
Deciphering the virulence factors of Mycobacterium abscessus activated in the presence of environmental amoebae
Lire plus01 févr. 2017
publication
The Legionella pneumophila genome evolved to accommodate multiple regulatory mechanisms controlled by the CsrA-system.
Lire plus31 janv. 2017
project
Transcriptome of different quiescence sub-states of neural stem cells in adult zebrafish
Lire plus31 janv. 2017
27 janv. 2017
21 oct. 2016
publication
Extensive transcriptome analysis correlates the plasticity of Entamoeba histolytica pathogenesis to rapid phenotype changes depending on the environment
Lire plus15 juin 2016
publication
GH16 and GH81 family β-(1,3)-glucanases in Aspergillus fumigatus are essential for conidial cell wall morphogenesis
Lire plus09 juin 2016
publication
SARTools: A DESeq2- and EdgeR-Based R Pipeline for Comprehensive Differential Analysis of RNA-Seq Data
Lire plus18 mai 2016
18 mai 2016
26 avr. 2016
20 avr. 2016
20 avr. 2016
04 janv. 2016
publication
RNase J depletion leads to massive changes in mRNA abundance in Helicobacter pylori.
Lire plus20 oct. 2015
publication
Normal and Cystic Fibrosis Human Bronchial Epithelial Cells Infected with Pseudomonas aeruginosa Exhibit Distinct Gene Activation Patterns
Lire plus01 oct. 2015
01 oct. 2015
28 sept. 2015
publication
The PfAlba1 RNA-binding protein is an important regulator of translational timing in Plasmodium falciparum blood stages
Lire plus24 sept. 2015
18 sept. 2015
project
A personal database system for large scale quantitative results exploration (Cassandre, PTR 463)
Lire plus14 sept. 2015
10 sept. 2015
project
Role of neuronal, microglial and glial cells during rabies virus infection in the modulation of innate immune response: MIME-RAB
Lire plus08 sept. 2015
project
Dynamic regulation of chromatin and transcription by HP1 Heterochromatin Proteins in relationship with RNA.
Lire plus16 juil. 2015
18 mars 2015
13 mars 2015
04 févr. 2015
31 janv. 2015
project
Régulation transcriptionnelle par l’Enhancer de Trithorax et Polycomb Corto et la Protéine Ribosomique L12.
Lire plus10 janv. 2015
publication
Repressor activity of the RpoS/σS-dependent RNA polymerase requires DNA binding
Lire plus05 déc. 2014
publication
Differences in gene transcriptomic pattern of Plasmodium falciparum in children with cerebral malaria and asymptomatic carriers
Lire plus12 mai 2014
publication
DYRK1A phoshorylates histone H3 to differentially regulate the binding of HP1 isoforms and antagonize HP1-mediated transcriptional repression
Lire plus08 mai 2014
publication
Expanding the RpoS/σS-network by RNA sequencing and identification of σS-controlled small RNAs in Salmonella
Lire plus03 avr. 2014
publication
Identified members of the Streptomyces lividans AdpA regulon involved in differentiation and secondary metabolism
Lire plus31 mars 2014
publication
A putative regulatory genetic locus modulates virulence in the pathogen Leptospira interrogans
Lire plus05 mars 2014
publication
Extracellular adenosine triphosphate affects the response of human macrophages infected with Mycobacterium tuberculosis
Lire plus22 févr. 2014
publication
Strand-specific RNA-Seq reveals widespread and developmentally regulated transcription of natural antisense transcripts in Plasmodium falciparum
Lire plus19 déc. 2013
publication
Identification of the virulence landscape essential for Entamoeba histolytica invasion of the human colon
Lire plus04 oct. 2013
publication
Induction of the Cpx envelope stress pathway contributes to Escherichia coli tolerance to antimicrobial peptides
Lire plus17 sept. 2013
publication
Identification and characterization of the genetic changes responsible for the characteristic smooth-to-rough morphotype alterations of clinically persistent Mycobacterium abscessus
Lire plus01 août 2013
22 mai 2013
09 mai 2013
publication
Genome-wide identification of regulatory RNAs in the human pathogen Clostridium difficile
Lire plus01 avr. 2013
01 févr. 2013
publication
Quantification of stochastic noise of splicing and polyadenylation in Entamoeba histolytica
Lire plus03 janv. 2013
publication
Starvation, together with the SOS response, mediates high biofilm-specific tolerance to the fluoroquinolone ofloxacin
Lire plus01 janv. 2013
publication
Life in an arsenic-containing gold mine: genome and physiology of the autotrophic arsenite-oxidizing bacterium rhizobium sp. NT-26
Lire plus13 déc. 2012
publication
Distinct transcriptional signatures of bone marrow-derived C57BL/6 and DBA/2 dendritic leucocytes hosting live Leishmania amazonensis amastigotes
Lire plus21 nov. 2012
publication
Dicer-2- and Piwi-mediated RNA interference in Rift Valley fever virus-infected mosquito cells
Lire plus16 août 2012
publication
RNA sequencing revealed novel actors of the acquisition of drug resistance in Candida albicans
Lire plus01 avr. 2012
publication
Deep sequencing defines the transcriptional map of L. pneumophila and identifies growth phase-dependent regulated ncRNAs implicated in virulence
Lire plus12 mars 2012
publication
Human cryptochrome-1 confers light independent biological activity in transgenic Drosophila correlated with flavin radical stability
Lire plus24 févr. 2012
publication
Endoplasmic reticulum stress-sensing mechanism is activated in Entamoeba histolytica upon treatment with nitric oxide
Lire plus24 févr. 2012
publication
Myf5 haploinsufficiency reveals distinct cell fate potentials for adult skeletal muscle stem cells
Lire plus27 déc. 2011
publication
Naive and primed murine pluripotent stem cells have distinct miRNA expression profiles
Lire plus29 sept. 2011
publication
Genome-wide analysis of heteroduplex DNA in mismatch repair-deficient yeast cells reveals novel properties of meiotic recombination pathways
Lire plus27 août 2011
04 avr. 2011
publication
Artesunate tolerance in transgenic Plasmodium falciparum parasites overexpressing a tryptophan-rich protein
Lire plus13 janv. 2011
publication
Microarray estimation of genomic inter-strain variability in the genus Ectocarpus (Phaeophyceae)
Lire plus05 janv. 2011
publication
Overexpression of proinflammatory TLR-2-signalling lipoproteins in hypervirulent mycobacterial variants
Lire plus17 déc. 2010
publication
Temporal transcriptomic response during arsenic stress in Herminiimonas arsenicoxydans
Lire plus10 juin 2010
publication
From array-based hybridization of Helicobacter pylori isolates to the complete genome sequence of an isolate associated with MALT lymphoma
Lire plus10 juin 2010
publication
From array-based hybridization of Helicobacter pylori isolates to the complete genome sequence of an isolate associated with MALT lymphoma.
Lire plus01 mars 2010
publication
Decreased in vitro susceptibility of Plasmodium falciparum isolates to artesunate, mefloquine, chloroquine, and quinine in Cambodia from 2001 to 2007
Lire plus26 févr. 2010
18 févr. 2010
publication
Multiple controls affect arsenite oxidase gene expression in Herminiimonas arsenicoxydans
Lire plus30 nov. 2009
publication
The endogenous siRNA pathway is involved in heterochromatin formation in Drosophila
Lire plus15 oct. 2009
publication
FlexiChip package: an universal microarray with a dedicated analysis software for high-thoughput SNPs detection linked to anti-malarial drug resistance
Lire plus03 août 2009
publication
The global regulator CodY regulates toxin gene expression in Bacillus anthracis and is required for full virulence
Lire plus31 juil. 2009
publication
Identification of brevibacteriaceae by multilocus sequence typing and comparative genomic hybridization analyses
Lire plus10 juil. 2009
publication
Unusual composition of a yeast chromosome arm is associated with its delayed replication
Lire plus18 juin 2009
08 juin 2009
publication
CymR, the master regulator of cysteine metabolism in Staphylococcus aureus, controls host sulphur source utilization and plays a role in biofilm formation
Lire plus20 mars 2009
publication
Transcriptional signatures of BALB/c mouse macrophages housing multiplying Leishmania amazonensis amastigotes
Lire plus23 févr. 2009
publication
Field-based evidence of fast and global increase of Plasmodium falciparum drug-resistance by DNA-microarrays and PCR/RFLP in Niger
Lire plus06 déc. 2008
publication
Genomic polymorphism in the population of Candida glabrata: gene copy-number variation and chromosomal translocations
Lire plus25 sept. 2008
publication
Enhanced structural and functional genome elucidation of the arsenite-oxidizing strain Herminiimonas arsenicoxydans by proteomics data
Lire plus16 sept. 2008
publication
Transcriptomic analysis of the exit from dormancy of Aspergillus fumigatus conidia
Lire plus18 août 2008
publication
Dynamic RNA profiling in Plasmodium falciparum synchronized blood stages exposed to lethal doses of artesunate
Lire plus09 juil. 2008
16 avr. 2008
publication
Chemotaxis of Entamoeba histolytica towards the pro-inflammatory cytokine TNF is based on PI3K signalling, cytoskeleton reorganization and the Galactose/N-acetylgalactosamine lectin activity
Lire plus01 avr. 2008
publication
AffyGCQC: a web-based interface to detect outlying genechips with extreme studentized deviate tests
Lire plus26 mars 2008
publication
Plasmodium falciparum transcriptome analysis reveals pregnancy malaria associated gene expression
Lire plus25 oct. 2007
publication
Whole-transcriptome analysis of Plasmodium falciparum field isolates: identification of new pathogenicity factors
Lire plus01 oct. 2007
publication
Long oligonucleotide microarrays for African green monkey gene expression profile analysis.
Lire plus05 sept. 2007
publication
Rapid microarray-based method for monitoring of all currently known single-nucleotide polymorphisms associated with parasite resistance to antimalaria drugs
Lire plus01 sept. 2007
publication
Transcriptome analysis of Yersinia pestis in human plasma: an approach for discovering bacterial genes involved in septicaemic plague.
Lire plus17 août 2007
publication
The lysine- and glutamic acid-rich protein KERP1 plays a role in Entamoeba histolytica liver abscess pathogenesis
Lire plus03 août 2007
01 janv. 2007
01 août 2006
publication
Virulence strategies for infecting phagocytes deduced from the in vivo transcriptional program of Legionella pneumophila
Lire plus01 mai 2006
publication
Stress by heat shock induces massive down regulation of genes and allows differential allelic expression of the Gal/GalNAc lectin in Entamoeba histolytica
Lire plus15 janv. 2006
publication
Anti-inflammatory effect of Lactobacillus casei on Shigella-infected human intestinal epithelial cells
Lire plus31 oct. 2005
publication
Transcriptome analysis of antigenic variation in Plasmodium falciparum–var silencing is not dependent on antisense RNA
Lire plus13 mai 2005
01 janv. 2005
publication
Adherence modifies the regulation of gene expression induced by interleukin-10
Lire plus01 janv. 2004
publication
GadE (YhiE): a novel activator involved in the response to acid environment in Escherichia coli
Lire plus01 mars 2003
publication