Timeline

Odile Sismeiro
Research Engineer
30 Jan 2024
event

Webinaire de l’Enseignement – Arnaud FONTANET

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22 Dec 2023
course

Viral Outbreaks and Pandemics, A One Health Approach MOOC

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30 Nov 2023
publication

Transcriptome profiling of human col\onic cells exposed to the gut pathobiont Streptococcus gallolyticus subsp. gallolyticus.

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05 Nov 2022
publication

Systematic transcriptome analysis allows the identification of new type I and type II Toxin/Antitoxin systems located in the superintegron of Vibrio cholerae.

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15 Jul 2022
publication

Y RNAs are conserved endogenous RIG-I ligands across RNA virus infection and are targeted by HIV-1

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15 Apr 2022
news

A recent study by the team of Laurent Debarbieux has been highlighted in the BIP (15/04/2022)

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13 Apr 2022
publication

The gut environment regulates bacterial gene expression which modulates susceptibility to bacteriophage infection.

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17 Mar 2022
course

Vaccinology MOOC

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01 Mar 2022
publication

Mosquito-bacteria interactions during larval development trigger metabolic changes with carry-over effects on adult fitness.

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25 Feb 2022
publication

Trained ILC3 responses promote intestinal defense.

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15 Feb 2022
publication

Bacteroides thetaiotaomicron uses a widespread extracellular DNase to promote bile-dependent biofilm formation.

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03 Feb 2022
course

Multiple roles of RNAs

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01 Dec 2021
publication

The oxidative stress response of pathogenic Leptospira is controlled by two peroxide stress regulators which putatively cooperate in controlling virulence.

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22 Oct 2021
publication

Sleeping ribosomes: Bacterial signaling triggers RaiA mediated persistence to aminoglycosides.

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17 Oct 2021
publication

Role of the major determinant of polar flagellation FlhG in the endoflagella-containing spirochete Leptospira.

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09 Sep 2021
course

MOOC Viruses and Human Cancers

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01 Sep 2021
publication

The CovR regulatory network drives the evolution of Group B Streptococcus virulence.

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18 May 2021
publication

Functional Genomic and Biochemical Analysis Reveals Pleiotropic Effect of Congo Red on Aspergillus fumigatus.

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05 Apr 2021
publication

Yolk sac, but not hematopoietic stem cell-derived progenitors, sustain erythropoiesis throughout murine embryonic life.

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12 Jan 2021
project

Insights into amebiasis using a human 3D-intestinal model (ANR-14-IFEC-0001-02)

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08 Jan 2021
project

Understanding the Pathogenicity of Entamoeba Using Comparative Transcriptomics and Phylogenomics – GENAMIBE. Project-ANR-10-GENM-0011

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06 Jan 2021
publication

Aspergillus fumigatus, One Uninucleate Species with Disparate Offspring.

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02 Dec 2020
publication

4-Methylcytosine DNA modification is critical for global epigenetic regulation and virulence in the human pathogen Leptospira interrogans.

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06 Oct 2020
publication

The transcriptional response of pathogenic Leptospira to peroxide reveals new defenses against infection-related oxidative stress.

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01 Aug 2020
publication

Insights into amebiasis using a human 3D-intestinal model.

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02 Jun 2020
publication

Human Immune Response Triggered by Entamoeba histolytica in a 3D-Intestinal Model

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04 May 2020
publication

Intracellular Staphylococcus aureus persisters upon antibiotic exposure

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29 Apr 2020
publication

Macromolecular crowding links ribosomal protein gene dosage to growth rate in Vibrio cholerae.

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08 Nov 2019
publication

Mycobacterium abscessus virulence traits unraveled by transcriptomic profiling in amoeba and macrophages

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21 Oct 2019
publication

Non-specific interference of cobalt with siderophore-dependent iron uptake pathways

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02 Aug 2019
team

Biomics – Wet-Lab

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15 May 2019
publication

Transcriptional profiling of a laboratory and clinical Mycobacterium tuberculosis strain suggests respiratory poisoning upon exposure to delamanid

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06 Jul 2018
publication

Enzymatic synthesis of random sequences of RNA and RNA analogues by DNA polymerase theta mutants for the generation of aptamer libraries

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13 Jun 2018
publication

Enteric bacteria boost defences against oxidative stress in Entamoeba histolytica

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21 May 2018
publication

Expansion of the SOS regulon of Vibrio cholerae through extensive transcriptome analysis and experimental validation

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25 Oct 2017
publication

An ApiAP2 member regulates expression of clonally variant genes of the human malaria parasite Plasmodium falciparum

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23 Aug 2017
news

A new SPOC

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24 Mar 2017
publication

An Optimized Method for Extracting Bacterial RNA from Mouse Skin Tissue Colonized by Mycobacterium ulcerans

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02 Feb 2017
project

Deciphering the virulence factors of Mycobacterium abscessus activated in the presence of environmental amoebae

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01 Feb 2017
publication

The Legionella pneumophila genome evolved to accommodate multiple regulatory mechanisms controlled by the CsrA-system.

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31 Jan 2017
project

The role of lncRNA H19 in Thymopoiesis

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27 Jan 2017
event

Recherche volontaires pour tester un nouveau SPOC

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27 Jan 2017
news

checkMyIndex: a new tool to choose sequencing indexes

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19 Jan 2017
publication

Genome-Wide Transcriptional Start Site Mapping and sRNA Identification in the Pathogen Leptospira interrogans

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22 Sep 2016
course

Workshop: Bacterial RNAseq

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15 Jun 2016
publication

GH16 and GH81 family β-(1,3)-glucanases in Aspergillus fumigatus are essential for conidial cell wall morphogenesis

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26 Apr 2016
event

Training: analysis of the transcriptome by RNAseq

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20 Apr 2016
course

Training: analysis of the transcriptome by RNAseq

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24 Mar 2016
publication

Comparative analysis of viral RNA signatures on different RIG-I-like receptors

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12 Jan 2016
news

New protocol available for Stranded RNAseq from total RNA pico input Mammalian

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04 Jan 2016
publication

RNase J depletion leads to massive changes in mRNA abundance in Helicobacter pylori.

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01 Oct 2015
project

Intracellular membrane proliferation in E. coli

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01 Oct 2015
news

New protocol available for RNAseq from low input total RNA

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28 Sep 2015
publication

The PfAlba1 RNA-binding protein is an important regulator of translational timing in Plasmodium falciparum blood stages

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24 Sep 2015
news

Single Cell RNAseq at PF2, by O.Sismeiro and M-A.Dillies

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14 Sep 2015
project

HIV signature on RIG-I-like receptors

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30 May 2015
publication

Single nucleotide resolution RNA-seq uncovers new regulatory mechanisms in the opportunistic pathogen Streptococcus agalactiae

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01 May 2015
publication

Small RNA Deep-Sequencing Analyses Reveal a New Regulator of Virulence in Agrobacterium fabrum C58

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18 Mar 2015
team

Biomics

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13 Mar 2015
project

Biostatistics for data analysis

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04 Feb 2015
project

Technological developments

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10 Jan 2015
publication

Repressor activity of the RpoS/σS-dependent RNA polymerase requires DNA binding

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08 May 2014
publication

Expanding the RpoS/σS-network by RNA sequencing and identification of σS-controlled small RNAs in Salmonella

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31 Mar 2014
publication

A putative regulatory genetic locus modulates virulence in the pathogen Leptospira interrogans

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22 Feb 2014
publication

Strand-specific RNA-Seq reveals widespread and developmentally regulated transcription of natural antisense transcripts in Plasmodium falciparum

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10 Dec 2013
publication

The intestinal microbiota interferes with the microRNA response upon oral Listeria infection

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22 May 2013
publication

Massive activation of archaeal defense genes during viral infection

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09 May 2013
publication

Genome-wide identification of regulatory RNAs in the human pathogen Clostridium difficile

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01 Apr 2013
publication

Identification of RNA partners of viral proteins in infected cells

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01 Feb 2013
publication

Quantification of stochastic noise of splicing and polyadenylation in Entamoeba histolytica

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01 Jan 2013
publication

Life in an arsenic-containing gold mine: genome and physiology of the autotrophic arsenite-oxidizing bacterium rhizobium sp. NT-26

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21 Nov 2012
publication

Dicer-2- and Piwi-mediated RNA interference in Rift Valley fever virus-infected mosquito cells

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16 Aug 2012
publication

RNA sequencing revealed novel actors of the acquisition of drug resistance in Candida albicans

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01 Apr 2012
publication

Deep sequencing defines the transcriptional map of L. pneumophila and identifies growth phase-dependent regulated ncRNAs implicated in virulence

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27 Dec 2011
publication

Naive and primed murine pluripotent stem cells have distinct miRNA expression profiles

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18 Feb 2010
publication

Multiple controls affect arsenite oxidase gene expression in Herminiimonas arsenicoxydans

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30 Nov 2009
publication

The endogenous siRNA pathway is involved in heterochromatin formation in Drosophila

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15 Oct 2009
publication

FlexiChip package: an universal microarray with a dedicated analysis software for high-thoughput SNPs detection linked to anti-malarial drug resistance

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16 Apr 2008
publication

Chemotaxis of Entamoeba histolytica towards the pro-inflammatory cytokine TNF is based on PI3K signalling, cytoskeleton reorganization and the Galactose/N-acetylgalactosamine lectin activity

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17 Aug 2007
publication

The lysine- and glutamic acid-rich protein KERP1 plays a role in Entamoeba histolytica liver abscess pathogenesis

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01 Jan 2007
publication

Bringing the genome of Legionella pneumophila to life (book chapter)

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01 May 2006
publication

Stress by heat shock induces massive down regulation of genes and allows differential allelic expression of the Gal/GalNAc lectin in Entamoeba histolytica

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