Search anything and hit enter
  • Teams
  • Members
  • Projects
  • Events
  • Calls
  • Jobs
  • publications
  • Software
  • Tools
  • Network
  • Equipment

A little guide for advanced search:

  • Tip 1. You can use quotes "" to search for an exact expression.
    Example: "cell division"
  • Tip 2. You can use + symbol to restrict results containing all words.
    Example: +cell +stem
  • Tip 3. You can use + and - symbols to force inclusion or exclusion of specific words.
    Example: +cell -stem
e.g. searching for members in projects tagged cancer
Search for
Count
IN
OUT
Content 1
  • member
  • team
  • department
  • center
  • program_project
  • nrc
  • whocc
  • project
  • software
  • tool
  • patent
  • Administrative Staff
  • Assistant Professor
  • Associate Professor
  • Clinical Research Assistant
  • Clinical Research Nurse
  • Clinician Researcher
  • Department Manager
  • Dual-education Student
  • Full Professor
  • Honorary Professor
  • Lab assistant
  • Master Student
  • Non-permanent Researcher
  • Nursing Staff
  • Permanent Researcher
  • Pharmacist
  • PhD Student
  • Physician
  • Post-doc
  • Prize
  • Project Manager
  • Research Associate
  • Research Engineer
  • Retired scientist
  • Technician
  • Undergraduate Student
  • Veterinary
  • Visiting Scientist
  • Deputy Director of Center
  • Deputy Director of Department
  • Deputy Director of National Reference Center
  • Deputy Head of Facility
  • Director of Center
  • Director of Department
  • Director of Institute
  • Director of National Reference Center
  • Group Leader
  • Head of Facility
  • Head of Operations
  • Head of Structure
  • Honorary President of the Departement
  • Labex Coordinator
Content 2
  • member
  • team
  • department
  • center
  • program_project
  • nrc
  • whocc
  • project
  • software
  • tool
  • patent
  • Administrative Staff
  • Assistant Professor
  • Associate Professor
  • Clinical Research Assistant
  • Clinical Research Nurse
  • Clinician Researcher
  • Department Manager
  • Dual-education Student
  • Full Professor
  • Honorary Professor
  • Lab assistant
  • Master Student
  • Non-permanent Researcher
  • Nursing Staff
  • Permanent Researcher
  • Pharmacist
  • PhD Student
  • Physician
  • Post-doc
  • Prize
  • Project Manager
  • Research Associate
  • Research Engineer
  • Retired scientist
  • Technician
  • Undergraduate Student
  • Veterinary
  • Visiting Scientist
  • Deputy Director of Center
  • Deputy Director of Department
  • Deputy Director of National Reference Center
  • Deputy Head of Facility
  • Director of Center
  • Director of Department
  • Director of Institute
  • Director of National Reference Center
  • Group Leader
  • Head of Facility
  • Head of Operations
  • Head of Structure
  • Honorary President of the Departement
  • Labex Coordinator
Search

← Go to Research

Go back
Scroll to top
Share
Past News

About

Scientific activities of the Microbial Evolutionary Genomics Unit are centered on the bioinformatics and biostatistics analysis of genomes, at the crossroads of molecular evolution, population genetics, molecular epidemiology, and molecular genetics. We also develop some translational aspects related with the study of the diversity of bacterial pathogens.

We focus on four major questions:

  1. How and why are genomes organized?
  2. How are such organizational features evolving in face of the extensive genome dynamics?
  3. What are the roles of mobile elements in the evolution of the host genomes?
  4. What is the interplay between genome dynamics and bacterial pathogen emergence at the microevolutionary and epidemiological scale?

Our team is part of the network Phages.fr, of the GDR BIM, and of GDR AIEM.

Former Members

2000
2000
Name
Position
2008
2011
Todd Treangen
Post-doc, now Associated Professor Rice U (USA)
2013
2017
Sylvain Brisse
Researcher, now PI Institut Pasteur
2015
2017
Aude Bernheim
PhD Student, now PI Institut Pasteur
2011
2013
Julien Guglielmini
Post-doc, now Research Engineer at Institut Pasteur
2011
2015
Louis-Marie Bobay
PhD Student, now Assistant Professor NC State (USA)
2008
2009
Chris Smillie
Graduate Student, now PI Harvard Medical School (USA)
2011
2014
Sophie Abby
Post-doc, now tenured researcher CNRS
2014
2017
Jean Cury
PhD Student, now tenured researcher CNRS
2013
2016
Pedro Couto Oliveira
Post-doc, now PI CEA
2008
2012
Sara Vieira-Silva
PhD Student, now Professor U Mainz (Germany)
2013
2015
Mylène Maury
PhD student, now Computational Biologist, Boehringer Ingelheim
2015
2016
Camille Clerissi
Post-doc, now Assistant Professor, U Perpignan
2014
2014
Elise Larsonneur
Research Engineer
2015
2015
Joao P. Alves Gama
PhD Student (visiting), now post-doc
2013
2016
Marc Garcia-Garcera
Post-doc, now Microbiome specialist at Nestlé
2013
2017
Alexis Criscuolo
Research Engineer
2013
2017
Virginie Passet
Technician
2013
2016
Camille Blin
PhD Student, now teacher
2018
2019
Antoine Frenoy
Post-doc, now Assistant Professor U Grenoble
2019
2019
Elif Elçin
Graduate Student, now Postdoctoral Researcher at Max-Planck
2019
2020
Martin Guillemet
Graduate Student, now postdoc ETH Zurich
2017
2019
Fanny Wegner
Post-doc
2016
2019
Remi Denise
PhD Student, now post-doc U Cork
2018
2018
Tess Brewer
PhD Student (visiting), now post-doc U Zurich
2019
2019
Manuel Ares Arroyo
PhD Student (visiting), now post-doc Institut Pasteur
2019
2019
Stijn Wittouck
PhD Student (visiting), now post-doc University of Antwerp
2018
2018
Valerie de Crecy-Lagard
Prof in Sabbatical (University of Florida)
2019
2019
Chris M. Brown
Prof in Sabbatical (University of Otago)
2020
2020
Alonso Ruiz
PhD Student (visiting), now CTO Evolving Therapeutics
2018
2022
Matthieu Haudiquet
PhD Student, now post-doc Institut Curie
2021
2021
Neris Gonzalez
PhD Student (visiting), now post-doc
2022
2022
Laura Celestino
PhD Student (visiting)
2022
2023
Kristen Curry
PhD Student (visiting), now post-doc Institut Pasteur
2022
2022
Francesca D’Angelo
Post-doc
2022
2022
Janusz Koszucki
PhD Student (visiting)
2018
2023
Eugen Pfeifer
Post-doc, now Chair Young Professor INRAE
2016
2024
Olaya Rendueles
Postdoc, now senior CNRS researcher, Chair ANR Bio/Santé
2019
2024
Charles Coluzzi
Post-doc, now Chair Young Professor U Lyon
Show all

Projects

Transversal Project

Software

Tools

Fundings

Publications

Download

Contact

Email: erochaATpasteur.fr Address 25-28 Rue du Docteur Roux 75015, Paris France