Timeline

Christiane Bouchier
Permanent Researcher
04 Feb 2020
publication

TbD1 deletion as a driver of the evolutionary success of modern epidemic Mycobacterium tuberculosis lineages

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06 Jan 2020
team

Pathogen discovery

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19 Jul 2019
project

Genomic insights into the 2016-2017 cholera epidemic in Yemen

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19 Jul 2019
project

Historical antibiotic-resistant populations of S. enterica serotype Typhimurium

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02 Jan 2019
publication

Genomic insights into the 2016-2017 cholera epidemic in Yemen

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06 Sep 2018
publication

Sequana Coverage: Detection and Characterization of Genomic Variations using Running Median and Mixture Models

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21 Aug 2018
publication

Generating genomic platforms to study Candida albicans pathogenesis

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11 Jul 2018
publication

Unexpected genomic and phenotypic diversity of Mycobacterium africanum Lineage 5 affects drug resistance, protein secretion and immunogenicity

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08 Jun 2018
publication

Gene flow contributes to diversification of the major fungal pathogen Candida albicans

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19 Jan 2018
publication

Sequanix: A Dynamic Graphical Interface for Snakemake Workflows

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20 Aug 2017
news

Hot off the press: microbiota of mosquito larvae influences adult vectorial capacity

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01 Feb 2017
publication

Characterization of Clostridium Baratii Type F Strains Responsible for an Outbreak of Botulism Linked to Beef Meat Consumption in France

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17 Jan 2017
publication

Resistance to thiacetazone derivatives active against Mycobacterium abscessus involves mutations in the MmpL5 transcriptional repressor MAB_4384

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22 Nov 2016
software

Sequana: a set of flexible NGS pipelines

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03 Nov 2016
publication

A surrogate marker of piperaquine-resistant Plasmodium falciparum malaria: a phenotype-genotype association study

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15 Aug 2016
publication

Key experimental evidence of chromosomal DNA transfer among selected tuberculosis-causing mycobacteria

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20 Jul 2016
publication

DNA minicircles clarify the specific role of DNA structure on retroviral integration

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13 Jun 2016
publication

Diversity of Group I and II Clostridium botulinum Strains from France Including Recently Identified Subtypes

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13 May 2016
publication

Molecular characterization of Orf virus in goats in Gabon, Central Africa

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28 Apr 2016
publication

A new piperidinol derivative targeting mycolic acid transport in Mycobacterium abscessus

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21 Apr 2016
publication

A penicillin- and metronidazole-resistant Clostridium botulinum strain responsible for an infant botulism case

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22 Mar 2016
project

Private: Histoire évolutive du bacille de la dysenterie épidémique (Shigella dysenteriae de type 1)

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22 Mar 2016
project

Phylogenomics of Shiga’s epidemic dysentery bacillus (Shigella dysenteriae type 1)

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21 Mar 2016
publication

Global phylogeography and evolutionary history of Shigella dysenteriae type 1

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10 Mar 2016
publication

Unmasking the ancestral activity of integron integrases reveals a smooth evolutionary transition during functional innovation.

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17 Feb 2016
publication

Genome-wide mosaicism within Mycobacterium abscessus: evolutionary and epidemiological implications

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16 Feb 2016
publication

Demography and Intercontinental Spread of the USA300 Community-Acquired Methicillin-Resistant Staphylococcus aureus Lineage

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27 Jan 2016
publication

pks5-recombination-mediated surface remodelling in Mycobacterium tuberculosis emergence

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27 Jan 2016
publication

pks5-recombination-mediated surface remodelling in Mycobacterium tuberculosis emergence

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18 Dec 2015
publication

Insights into the smooth-to-rough transitioning in Mycobacterium bolletii unravels a functional Tyr residue conserved in all mycobacterial MmpL family members

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15 Dec 2015
publication

No evidence for viral sequences in five lepidic adenocarcinomas (former “BAC”) by a high-throughput sequencing approach

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26 Nov 2015
publication

Identification of lymphocytic choriomeningitis mammarenavirus in house mouse (Mus musculus, Rodentia) in French Guiana

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15 Oct 2015
publication

Draft Genome Sequences of Acinetobacter parvus CM11, Acinetobacter radioresistens CM38, and Stenotrophomonas maltophilia BR12, Isolated from Murine Proximal Colonic Tissue

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08 Oct 2015
publication

Clostridium difficile: New Insights into the Evolution of the Pathogenicity Locus

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01 Oct 2015
publication

Induction of Multidrug Tolerance in Plasmodium falciparum by Extended Artemisinin Pressure

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10 Sep 2015
project

Genetic variability of non-segmented negative RNA virus populations and host adaptation (Viva&Host)

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02 Sep 2015
publication

Genome-wide replication landscape of Candida glabrata

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24 Aug 2015
publication

First Detection of an Enterovirus C99 in a Captive Chimpanzee with Acute Flaccid Paralysis, from the Tchimpounga Chimpanzee Rehabilitation Center, Republic of Congo

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24 Jun 2015
publication

Distinct lineages of Ebola virus in Guinea during the 2014 West African epidemic

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15 Jun 2015
publication

Mutation landscape of acquired cross-resistance to glycopeptide and β-lactam antibiotics in Enterococcus faecium

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11 May 2015
team

Biology of Infection

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02 Apr 2015
publication

Draft Genome Sequence of Clostridium botulinum Strain 277-00 Type B2

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22 Mar 2015
publication

A vanG-type locus in Clostridium argentinense

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18 Mar 2015
team

Biomics

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30 Jan 2015
publication

Macrotene chromosomes provide insights to a new mechanism of high-order gene amplification in eukaryotes

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28 Jan 2015
publication

Corrigendum: Streptococcus agalactiae clones infecting humans were selected and fixed through the extensive use of tetracycline

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21 Jan 2015
publication

Foot Infection by Clostridium sordellii: Case Report and Review of 15 Cases in France

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01 Dec 2014
publication

Inter- and intraspecies transfer of a Clostridium difficile conjugative transposon conferring resistance to MLSB

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26 Nov 2014
publication

An atypical outbreak of food-borne botulism due to Clostridium botulinum types B and E from ham

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05 Nov 2014
publication

Evidence of lymphocytic choriomeningitis virus (LCMV) in domestic mice in Gabon: risk of emergence of LCMV encephalitis in Central Africa

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01 Oct 2014
publication

Effects of mefloquine use on Plasmodium vivax multidrug resistance

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16 Aug 2014
publication

Rapid 96-well plates DNA extraction and sequencing procedures to identify genome-wide transposon insertion sites in a difficult to lyse bacterium: Lactobacillus casei

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04 Aug 2014
publication

Streptococcus agalactiae clones infecting humans were selected and fixed through the extensive use of tetracycline

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04 Aug 2014
publication

Haemorrhagic toxin and lethal toxin from Clostridium sordellii strain vpi9048: molecular characterization and comparative analysis of substrate specificity of the large clostridial glucosylating toxins

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17 Jul 2014
publication

Genome Sequence of “Candidatus Arthromitus” sp. Strain SFB-Mouse-NL, a Commensal Bacterium with a Key Role in Postnatal Maturation of Gut Immune Functions

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17 Jul 2014
publication

Characterization of a genogroup I sapovirus isolated from chimpanzees in the republic of congo

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21 Apr 2014
publication

Parallel independent evolution of pathogenicity within the genus Yersinia

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25 Mar 2014
publication

Comparison of widely used Listeria monocytogenes strains EGD, 10403S, and EGD-e highlights genomic variations underlying differences in pathogenicity

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18 Feb 2014
publication

The Yersinia pseudotuberculosis complex: characterization and delineation of a new species, Yersinia wautersii

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07 Jan 2014
publication

Fuse or die: how to survive the loss of Dam in Vibrio cholerae

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18 Dec 2013
publication

A molecular marker of artemisinin-resistant Plasmodium falciparum malaria

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02 Oct 2013
publication

An atypical Clostridium strain related to the Clostridium botulinum group III strain isolated from a human blood culture

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17 Sep 2013
publication

Identification and characterization of the genetic changes responsible for the characteristic smooth-to-rough morphotype alterations of clinically persistent Mycobacterium abscessus

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14 Sep 2013
publication

Comparative genomics of emerging pathogens in the Candida glabrata clade

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22 Aug 2013
publication

Draft Genome Sequence of Lactobacillus pasteurii CRBIP 24.76T

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22 Aug 2013
publication

Draft Genome Sequence of Lactobacillus hominis Strain CRBIP 24.179T, Isolated from Human Intestine

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22 Aug 2013
publication

Draft Genome Sequences of Lactobacillus equicursoris CIP 110162T and Lactobacillus sp. Strain CRBIP 24.137, Isolated from Thoroughbred Racehorse Feces and Human Urine, Respectively

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22 Aug 2013
publication

Draft Genome Sequences of Five Strains of Lactobacillus acidophilus, Strain CIP 76.13T, Isolated from Humans, Strains CIRM-BIA 442 and CIRM-BIA 445, Isolated from Dairy Products, and Strains DSM 20242 and DSM 9126 of Unknown Origin

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31 Jul 2013
publication

Candida albicans is not always the preferential yeast colonizing humans: a study in Wayampi Amerindians

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08 May 2013
publication

Occurrence of mutations impairing sigma factor B (SigB) function upon inactivation of Listeria monocytogenes genes encoding surface proteins

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17 Apr 2013
publication

Genomic characterization of Sebokele virus 1 (SEBV1) reveals a new candidate species among the genus Parechovirus

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15 Apr 2013
publication

Reductive evolution in Streptococcus agalactiae and the emergence of a host adapted lineage

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06 Mar 2013
publication

Dandruff is associated with disequilibrium in the proportion of the major bacterial and fungal populations colonizing the scalp

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22 Feb 2013
publication

Modular evolution of TnGBSs, a new family of integrative and conjugative elements associating insertion sequence transposition, plasmid replication, and conjugation for their spreading

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21 Feb 2013
publication

Draft Genome Sequence of a Clinical Strain of Yersinia enterocolitica (IP10393) of Bioserotype 4/O:3 from France

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06 Jan 2013
publication

Genomic analysis of smooth tubercle bacilli provides insights into ancestry and pathoadaptation of Mycobacterium tuberculosis

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03 Dec 2012
publication

Plasmodium falciparum Na+/H+ exchanger (pfnhe-1) genetic polymorphism in Indian Ocean malaria-endemic areas

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01 Nov 2012
publication

Draft genome sequence of Lactobacillus gigeriorum CRBIP 24.85T, isolated from a chicken crop

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21 May 2012
publication

Role of the vpe carbohydrate permease in Escherichia coli urovirulence and fitness in vivo

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27 Feb 2012
publication

Expression of the resistance-nodulation-cell division pump AdeIJK in Acinetobacter baumannii is regulated by AdeN, a TetR-type regulator

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10 Feb 2012
publication

Lactobacillus pasteurii sp. nov. and Lactobacillus hominis sp. nov

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07 Feb 2012
publication

Insertion site preference of Mu, Tn5, and Tn7 transposons

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09 Jan 2012
publication

Discordant temporal evolution of Pfcrt and Pfmdr1 genotypes and Plasmodium falciparum in vitro drug susceptibility to 4-aminoquinolines after drug policy change in French Guiana

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12 Dec 2011
publication

Evolutionary genetic dissection of human interferons

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02 Dec 2011
publication

Performance of the CareStart™ G6PD deficiency screening test, a point-of-care diagnostic for primaquine therapy screening

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28 Nov 2011
publication

Reduced impact of pyrimethamine drug pressure on Plasmodium malariae dihydrofolate reductase gene

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01 Oct 2011
publication

Plasmodium knowlesi infection in humans, Cambodia, 2007-2010

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27 Sep 2011
publication

In vitro susceptibility to pyrimethamine of DHFR I164L single mutant Plasmodium falciparum

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29 Mar 2011
publication

Evolutionary genetics evidence of an essential, nonredundant role of the IFN-γ pathway in protective immunity

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18 Mar 2011
publication

Lactobacillus gigeriorum sp. nov., isolated from chicken crop

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13 Oct 2010
publication

Chloroquine clinical failures in P. falciparum malaria are associated with mutant Pfmdr-1, not Pfcrt in Madagascar

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10 Jun 2010
project

Pathogen discovery

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10 Jun 2010
publication

From array-based hybridization of Helicobacter pylori isolates to the complete genome sequence of an isolate associated with MALT lymphoma

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10 Jun 2010
publication

From array-based hybridization of Helicobacter pylori isolates to the complete genome sequence of an isolate associated with MALT lymphoma.

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01 May 2010
publication

Association of microsatellite variations of Plasmodium falciparum Na+/H+ exchanger (Pfnhe-1) gene with reduced in vitro susceptibility to quinine: lack of confirmation in clinical isolates from Africa

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23 Mar 2010
publication

Parasite polymorphism and severe malaria in Dakar (Senegal): a West African urban area

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22 Mar 2010
publication

Origins of the recent emergence of Plasmodium falciparum pyrimethamine resistance alleles in Madagascar

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15 Mar 2010
publication

Plasmodium vivax clinical malaria is commonly observed in Duffy-negative Malagasy people

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25 Feb 2010
publication

Geographic structuring of the Plasmodium falciparum sarco(endo)plasmic reticulum Ca2+ ATPase (PfSERCA) gene diversity

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19 Feb 2010
publication

Analysis of the Legionella longbeachae genome and transcriptome uncovers unique strategies to cause Legionnaires’ disease

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05 Feb 2010
publication

Genome sequence of Streptococcus gallolyticus: insights into its adaptation to the bovine rumen and its ability to cause endocarditis

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15 Oct 2009
publication

Population diversity and antibody selective pressure to Plasmodium falciparum MSP1 block2 locus in an African malaria-endemic setting

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15 Oct 2009
publication

FlexiChip package: an universal microarray with a dedicated analysis software for high-thoughput SNPs detection linked to anti-malarial drug resistance

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24 Aug 2009
publication

Plasmodium falciparum drug resistance in Madagascar: facing the spread of unusual pfdhfr and pfmdr-1 haplotypes and the decrease of dihydroartemisinin susceptibility

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21 Jul 2009
publication

Pseudomonas brassicacearum subsp. neoaurantiaca subsp. nov., orange-pigmented bacteria isolated from soil and the rhizosphere of agricultural plants

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17 Jul 2009
publication

Evolutionary dynamics of human Toll-like receptors and their different contributions to host defense

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16 Jul 2009
publication

Complete mitochondrial genome sequences of three Nakaseomyces species reveal invasion by palindromic GC clusters and considerable size expansion

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01 Jul 2009
publication

High prevalence and fixation of Plasmodium vivax dhfr/dhps mutations related to sulfadoxine/pyrimethamine resistance in French Guiana

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06 Jun 2009
publication

Strengthening the diagnostic capacity to detect Bio Safety Level 3 organisms in unusual respiratory viral outbreaks

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22 May 2009
publication

Rapid detection of point mutations in Plasmodium falciparum genes associated with antimalarial drugs resistance by using High-Resolution Melting analysis

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01 May 2009
publication

Microbacterium binotii sp. nov., isolated from human blood

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01 Apr 2009
publication

Genome sequence of Vibrio splendidus: an abundant planctonic marine species with a large genotypic diversity

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19 Feb 2009
publication

Signatures of purifying and local positive selection in human miRNAs

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05 Feb 2009
publication

Plasticity and evolution of aeruginosin biosynthesis in cyanobacteria

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01 Feb 2009
publication

European bat Lyssavirus transmission among cats, Europe

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23 Jan 2009
publication

Organised genome dynamics in the Escherichia coli species results in highly diverse adaptive paths

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12 Jan 2009
publication

Pfmdr1 copy number and arteminisin derivatives combination therapy failure in falciparum malaria in Cambodia

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21 Dec 2008
publication

Loss of heterozygosity in commensal isolates of the asexual diploid yeast Candida albicans

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28 Oct 2008
publication

Country-wide assessment of the genetic polymorphism in Plasmodium falciparum and Plasmodium vivax antigens detected with rapid diagnostic tests for malaria

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22 Sep 2008
publication

Plasmodium vivax resistance to chloroquine in Madagascar: clinical efficacy and polymorphisms in pvmdr1 and pvcrt-o genes

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05 Aug 2008
publication

Accumulation of CVIET Pfcrt allele of Plasmodium falciparum in placenta of pregnant women living in an urban area of Dakar, Senegal

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01 Aug 2008
publication

Tetrameric and homodimeric camelid IgGs originate from the same IgH locus

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08 Jul 2008
publication

Halogenase genes in nonribosomal peptide synthetase gene clusters of Microcystis (cyanobacteria): sporadic distribution and evolution

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01 Jul 2008
publication

Dihydrofolate reductase I164L mutation in Plasmodium falciparum, Madagascar

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05 Jun 2008
publication

Highly plastic genome of Microcystis aeruginosa PCC 7806, a ubiquitous toxic freshwater cyanobacterium

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30 Apr 2008
publication

Genomic diversity and evolution of the lyssaviruses

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26 Feb 2008
publication

Plasmodium vivax dhfr and dhps mutations in isolates from Madagascar and therapeutic response to sulphadoxine-pyrimethamine

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15 Feb 2008
publication

An extracellular glycoprotein is implicated in cell-cell contacts in the toxic cyanobacterium Microcystis aeruginosa PCC 7806

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13 Feb 2008
publication

Genome sequence of the saprophyte Leptospira biflexa provides insights into the evolution of Leptospira and the pathogenesis of leptospirosis

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01 Feb 2008
publication

Microcyclamide biosynthesis in two strains of Microcystis aeruginosa: from structure to genes and vice versa

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17 Dec 2007
publication

Sequence analysis of Plasmodium falciparum cytochrome b in multiple geographic sites

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23 Oct 2007
publication

Mating is rare within as well as between clades of the human pathogen Candida albicans

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01 Sep 2007
publication

Horizontal gene transfer of two cytoskeletal elements from a eukaryote to a cyanobacterium

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16 Apr 2007
publication

First case of emergence of atovaquone resistance in Plasmodium falciparum during second-line atovaquone-proguanil treatment in South America

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08 Jan 2007
publication

Reductive evolution and niche adaptation inferred from the genome of Mycobacterium ulcerans, the causative agent of Buruli ulcer

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03 Jan 2007
publication

Rapid dissemination of Plasmodium falciparum drug resistance despite strictly controlled antimalarial use

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15 Sep 2006
publication

Comparative and functional genomic analyses of iron transport and regulation in Leptospira spp

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31 May 2006
publication

A new rubisco-like protein coexists with a photosynthetic rubisco in the planktonic cyanobacteria Microcystis

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01 May 2006
publication

Multilocus sequence typing reveals intrafamilial transmission and microevolutions of Candida albicans isolates from the human digestive tract

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01 May 2006
publication

Stress by heat shock induces massive down regulation of genes and allows differential allelic expression of the Gal/GalNAc lectin in Entamoeba histolytica

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26 Apr 2006
publication

Invasion of Africa by a single pfcrt allele of South East Asian type

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01 Feb 2006
publication

A mannan binding lectin is involved in cell-cell attachment in a toxic strain of Microcystis aeruginosa

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22 Dec 2005
publication

Sequencing of Aspergillus nidulans and comparative analysis with A. fumigatus and A. oryzae

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01 Dec 2005
publication

Resistance of Plasmodium falciparum field isolates to in-vitro artemether and point mutations of the SERCA-type PfATPase6

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01 Aug 2005
publication

Countrywide survey shows very high prevalence of Plasmodium falciparum multilocus resistance genotypes in Cambodia

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01 Aug 2005
publication

Insights into the P. y. yoelii hepatic stage transcriptome reveal complex transcriptional patterns

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01 Jul 2005
publication

Genome of the host-cell transforming parasite Theileria annulata compared with T. parva

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01 Jan 2005
publication

The complete mitochondrial genome of the yeast Kluyveromyces thermotolerans

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01 Jan 2005
publication

[Apical left ventricular aneurysm without atrio-ventricular block due to a lamin A/C gene mutation]

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03 Oct 2004
publication

Evidence in the Legionella pneumophila genome for exploitation of host cell functions and high genome plasticity

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01 Jun 2004
publication

[Chemoresistance and polymorphism in falciparum malaria in Cambodia]

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01 Apr 2004
publication

The gas vesicle gene cluster from Microcystis aeruginosa and DNA rearrangements that lead to loss of cell buoyancy

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01 Dec 2003
publication

Apical left ventricular aneurysm without atrio-ventricular block due to a lamin A/C gene mutation

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01 Nov 2003
publication

Collaborative consensus for optimized multilocus sequence typing of Candida albicans

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01 Aug 2003
publication

The mcyF gene of the microcystin biosynthetic gene cluster from Microcystis aeruginosa encodes an aspartate racemase

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01 Aug 2003
publication

Expanding the phenotype of LMNA mutations in dilated cardiomyopathy and functional consequences of these mutations

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01 Jul 2003
publication

Mutational analysis of the beta- and delta-sarcoglycan genes in a large number of patients with familial and sporadic dilated cardiomyopathy

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01 Jul 2003
publication

Sequences and structural organization of phospholipase A2 genes from Vipera aspis aspis, V. aspis zinnikeri and Vipera berus berus venom. Identification of the origin of a new viper population based on ammodytin I1 heterogeneity

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01 May 2003
publication

Functional consequences of an LMNA mutation associated with a new cardiac and non-cardiac phenotype

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01 Dec 2001
publication

Idiopathic dilated cardiomyopathy: lack of association with haemochromatosis gene in the CARDIGENE study

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20 Nov 2000
publication

A new locus for autosomal dominant dilated cardiomyopathy identified on chromosome 6q12-q16

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01 Nov 2000
publication

Epidemiology of desmin and cardiac actin gene mutations in a european population of dilated cardiomyopathy

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15 Dec 1999
publication

Mutations in ribosomal protein S19 gene and diamond blackfan anemia: wide variations in phenotypic expression

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01 Jun 1999
publication

Abnormal restriction pattern of PIP gene associated with human primary prostate cancers

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01 Sep 1998
publication

New susceptibility locus for rheumatoid arthritis suggested by a genome-wide linkage study

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01 Jan 1997
publication

Isolation from a human seminal vesicle library of the cDNA for gp17, a CD4 binding factor

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01 Jan 1996
publication

Structure and function relationship of crotoxin, a heterodimeric neurotoxic phospholipase A2 from the venom of a South-American rattlesnake

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01 Feb 1995
publication

[IMAGE: molecular integration of the analysis of the human genome and its expression]

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01 Jul 1994
publication

The origin of the diversity of crotoxin isoforms in the venom of Crotalus durissus terrificus

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01 Dec 1991
publication

Notechis 11’2, a non-toxic phospholipase A2 from the venom of Notechis scutatus scutatus

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26 Mar 1991
publication

Analysis of cDNAs encoding the two subunits of crotoxin, a phospholipase A2 neurotoxin from rattlesnake venom: the acidic non enzymatic subunit derives from a phospholipase A2-like precursor

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01 Jan 1989
publication

Expression of tubulin, GFAP and of their encoding mRNAs during the proliferation and differentiation of cultured astrocytes

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01 Jan 1989
publication

Crotoxin, half-century of investigations on a phospholipase A2 neurotoxin

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26 Sep 1988
publication

Cloning and sequencing of cDNAs encoding the two subunits of Crotoxin

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26 Sep 1988
publication

Complete amino acid sequence of a PLA2 from the tiger snake Notechis scutatus scutatus as deduced from a complementary DNA

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26 Sep 1988
publication

Sequence analysis of a cDNA encoding a PLA2 from the sea-snake Aipysurus laevis

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21 Jan 1977
publication

Bile acid ethyl esters. Their infrequent formation during routine bile acid analysis and identification by gas chromatography and mass spectrometry

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01 Mar 1972
publication

[Binding of 1-anilino-8-naphthalene sulfonate by glyceraldehyde-3-phosphate dehydrogenase]

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01 Jun 1971
publication

Bilateral renal cortical necrosis with survival through the acute phase with a note on the value of selective nephroangiography

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28 Feb 1971
publication

[Introduction of medical records. 3. Record of cardiology]

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