Research Engineer
Julien Fumey
Microbial Paleogenomics Unit
Sorry, this entry is only available in FR.
Phylogeny/phylogenetics [103]
Laboratory
Biodiversity and Epidemiology of Bacterial Pathogens
Sylvain Brisse
Research Engineer
Najwa Taib
Pole PAGE – Phylogeny, Algorithms, (meta)Genomics, Evolution
After a PhD in bioinformatics and microbial ecology, I joined the team of C. Brochier-Armanet (Laboratoire de Biométrie et Biologie Évolutive) for a 2 years postdoc to study the deep evolution history of Archaea […]
Project
ANR SHAPE: Shaping new rhizobia by experimental evolution
Eduardo Rocha
Research Engineer
Thomas Bigot
Pole PAGE – Phylogeny, Algorithms, (meta)Genomics, Evolution
As a bioinformatics engineer, I design analysis methods to extract sequences of known or novel pathogens from metagenomic sequencing data of animal or clinical samples. My work involves evaluating existing methods based on local […]
Program Project
INCEPTION – Institut Convergence for the study of Emergence of Pathology Through Individuals and Populations
IINCEPTION Goal The Inception aims to develop a core structure to mobilize data resources, numerical sciences, and fundamental experimental biology in various health issues (Official website here: https://www.inception-program.fr/en). The inception program uses Integrative Biology, […]
Project
HIV-1 Drug Resistance Mutation analysis
Anna Zhukova
Project
Virogenesis
Project
NGPhylogeny.fr
Frédéric Lemoine
Permanent Researcher
Jorge Moura de Sousa
Microbial Evolutionary Genomics
Research Engineer
Blaise Li
Pole PAGE – Phylogeny, Algorithms, (meta)Genomics, Evolution
I obtained a PhD in phylogeny in 2008 at the Muséum National d’Histoire Naturelle in Paris, then worked as a post-doc in Torino (Italy, 2009 – 2011) and Faro (Portugal, 2011 – 2013) where […]
Permanent Researcher
Guillaume Borrel
Evolutionary Biology of the Microbial Cell
Guillaume has been a post-doctoral researcher funded by a Roux fellowship of the Institut Pasteur (2015-2017). Since January 2018 he has a permanent research position at the Institut Pasteur. His project focuses on the diversity […]
Assistant Professor
Anna Zhukova
Modelling of Pathogens: Evolution, Adaptation and Spread
I am applying my algorithmic and mathematical skills to extend our knowledge of pathogen transmission and evolution. In my work I develop new phylogenetic methods, tools and mathematical models to answer such questions as: […]
Research Engineer
Frédéric Lemoine
Bioinformatics and Biostatistics HUB
After completing a Master’s degree in bioinformatics and biostatistics, I pursued a PhD in computer science / bioinformatics at Université Paris-Sud (now Université Paris-Saclay). My doctoral research focused on the integration and analysis of […]
Project
Metagenomics for Pathogen Detection
Valérie Caro
Software