Project
Databases and ontologies [62]
Tool
TXSSdb, a database of protein secretion systems
Eduardo Rocha
Research Engineer
Thomas Cokelaer
Bioinformatics and Biostatistics HUB
I joined the Bioinformatics and Biostatistics Hub at Institut Pasteur in 2016 and was detached to the Platform Biomics (http://biomics.pasteur.fr). Since Oct 2018, I am leading the SALSA group (a.k.a. dry-lab group) activities, which […]
Research Engineer
Natalia Pietrosemoli
Expertise group : SysBio – System Bioinformatics
I joined the Hub Team @ Pasteur C3BI as a Senior Bioinformatician in November of 2015, where I am mainly focused on functional and pathway analysis at the genomic level. The goal of grouping […]
Permanent Researcher
Anna Zhukova
Evolutionary dynamics of infectious diseases
I am applying my algorithmic and mathematical skills to extend our knowledge of pathogen transmission and evolution. In my work I develop new phylogenetic methods, tools and mathematical models to answer such questions as: […]
Research Engineer
Frédéric Lemoine
Bioinformatics and Biostatistics HUB
After completing a Master’s degree in bioinformatics and biostatistics, I pursued a PhD in computer science / bioinformatics at Université Paris-Sud (now Université Paris-Saclay). My doctoral research focused on the integration and analysis of […]
Tool
ConjDB – a database of conjugative & mobilization systems and T4SS
Eduardo Rocha
Research Engineer
Amine Ghozlane
Expertise group: Genomics
Après une thèse d’informatique sur l’analyse de graphes de réseaux métaboliques et interactions des petits ARN avec les ARN messagers, j’ai effectué un premier post-doc dans l’équipe DSIMB (INTS) sur la modélisation structurale des […]
Tool
Genomic and nomenclature databases of pathogenic bacterial strains
Sylvain Brisse
Project
Bioinformatics of genome sequencing applied to epidemiological surveillance of infectious agents
Sylvain Brisse
Platform
Bioinformatics and Biostatistics HUB
Marie-Agnès Dillies • Hervé Menager
Research Engineer
Fabrice de Chaumont
Human Genetics and Cognitive Functions
Academic background During his PhD in robotics (Amiens, Berck), FdC conceived an autonomous robot designed to help disabled people, and especially paraplegics. The robot used omnidirectional vision sensor to SLAM and navigated automatically in […]
Research Engineer
Damien Mornico
Expertise group : SysBio – System Bioinformatics
Graduated in “Structural Genomics and Bioinformatics”, I mainly worked during almost 6 years at the Genoscope (CEA) in the LABGeM team, within the microbial annotation platform MicroScope. I specifically focused on functional annotation and […]
Research Engineer
Rachel Torchet
Expertise group : WINTER – Web integration
Since November 2014, I joined the Bioinformatics and Biostatistics HUB at Institut Pasteur. I joined the WINTER group where I’m in charge of web and interface development projects. I have completed an UX-Design training […]
Research Engineer
Hervé Menager
Bioinformatics and Biostatistics HUB
After an initial degree in Biology, I started my professional career as a software developer in the industry. Following the completion of my software engineering degree at the Conservatoire National des Arts et Métiers, […]
Research Engineer
Bertrand Néron
Expertise group : ALPS – Algorithmics and programming in science
I work as Research Software Engineer in the Bioinformatics and Biostatistics HUB of Institut Pasteur. My main mission is to help researchers to create the most efficient, scalable, and sustainable research codes possible in […]