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  • team
  • department
  • center
  • program_project
  • nrc
  • whocc
  • project
  • software
  • tool
  • patent
  • Administrative Staff
  • Assistant Professor
  • Associate Professor
  • Clinical Research Assistant
  • Department Manager
  • Full Professor
  • Graduate Student
  • Lab assistant
  • Non-permanent Researcher
  • Permanent Researcher
  • Pharmacist
  • PhD Student
  • Physician
  • Post-doc
  • Project Manager
  • Research Associate
  • Research Engineer
  • Retired scientist
  • Technician
  • Undergraduate Student
  • Veterinary
  • Visiting Scientist
  • Deputy Director of Center
  • Deputy Director of Department
  • Deputy Director of National Reference Center
  • Deputy Head of Facility
  • Director of Center
  • Director of Department
  • Director of Institute
  • Director of National Reference Center
  • Group Leader
  • Head of Facility
  • Head of Operations
  • Head of Structure
  • Honorary President of the Departement
  • Labex Coordinator
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Starting Date
03
Nov 2014
Ending Date
31
Dec 2022
Status
Ongoing
Members
3
Structures
19

About

The Institut Pasteur has voluminous activities of microbial strain characterisation, in the context of epidemiological surveillance, biological resource centres collections management, and research. These activities involve National Reference Centers, WHO-collaborative centers, biological resources centers and other microbiological expertise laboratories, together with the Hub for Bioinformatics and Biostatistics and the ‘Pole de Microbiologie Mutualisée’ (P2M, Mutualized Platform for Microbiology) core facility.

In this long-term institutional project, we implement and maintain fast data treatment pipelines, and develop innovative pathogen genotyping strategies (e.g., core genome multi locus sequence typing – cgMLST) and automated methods to extract medically relevant information from genomic sequences (species identification, resistome, virulome).

Fundings