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  • team
  • department
  • center
  • program_project
  • nrc
  • whocc
  • project
  • software
  • tool
  • patent
  • Administrative Staff
  • Assistant Professor
  • Associate Professor
  • Clinical Research Assistant
  • Full Professor
  • Graduate Student
  • Lab assistant
  • Non-permanent Researcher
  • Permanent Researcher
  • Pharmacist
  • PhD Student
  • Physician
  • Post-doc
  • Project Manager
  • Research Associate
  • Research Engineer
  • Retired scientist
  • Technician
  • Undergraduate Student
  • Veterinary
  • Visiting Scientist
  • Deputy Director of Center
  • Deputy Director of Department
  • Deputy Director of National Reference Center
  • Deputy Head of Facility
  • Director of Center
  • Director of Department
  • Director of Institute
  • Director of National Reference Center
  • Group Leader
  • Head of Facility
  • Head of Operations
  • Head of Structure
  • Honorary President of the Departement
  • Labex Coordinator
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Scientific Fields
Diseases
Organisms
Applications
Technique
Starting Date
01
Sep 2017
Status
Ongoing
Members
16
Structures
1

About

Bioconvert is a collaborative project to facilitate the interconversion of life science data from one format to another.

Life science uses many different formats. They may be old, or with complex syntax and converting those formats may be a challenge. bioconvert aims at providing a common tool / interface to convert life science data formats from one to another.

Many convertion tools already exist but they may be dispersed, focused on few specific formats, difficult to install, or not optimised. With bioconvert, we plan to cover a wide spectrum of format convertions; we will re-use existing tools when possible and provide facilities to compare different conversion tools or methods via benchmarking. New implementations are provided when considered better than existing ones.

Currently (June 2019), we have 45 formats, 95 direct conversions (much more are possible calling bioconvert several times).

If you are interested to join the project, please contact us on the github repository:
https://github.com/bioconvert/bioconvert