Timeline
Simon Cauchemez
Head of Structure
08 Feb 2025
publication
Factors associated with the transmission of the delta SARS-CoV-2 variant in households: the Israeli COVID-19 Family Study (ICoFS).
Read more13 Nov 2024
08 Nov 2024
publication
Accuracy of Xpert and alternative sampling methods to diagnose childhood pulmonary tuberculosis, a prospective cohort study.
Read more03 Oct 2024
01 Oct 2024
publication
Effect of nirsevimab on hospitalisations for respiratory syncytial virus bronchiolitis in France, 2023-24: a modelling study.
Read more06 Jun 2024
publication
Addressing current limitations of household transmission studies by collecting contact data.
Read more10 May 2024
21 Nov 2023
publication
Comparing the Performance of Three Models Incorporating Weather Data to Forecast Dengue Epidemics in Reunion Island, 2018-2019.
Read more08 Nov 2023
publication
Impact of vaccination against severe COVID-19 in the French population aged 50 years and above: a retrospective population-based study.
Read more13 Sep 2023
14 Aug 2023
publication
Two-dose measles vaccine effectiveness remains high over time: A French observational study, 2017-2019.
Read more01 Jun 2023
publication
Estimated protection against COVID-19 based on predicted neutralisation titres from multiple antibody measurements in a longitudinal cohort, France, April 2020 to November 2021.
Read more18 Apr 2023
publication
SARS-CoV-2 incubation period across variants of concern, individual factors, and circumstances of infection in France: a case series analysis from the ComCor study.
Read more01 Jan 2023
publication
Modelling the end of a Zero-COVID strategy using nirmatrelvir/ritonavir, vaccination and NPIs in Wallis and Futuna.
Read more01 Jan 2023
publication
Impact and mitigation of sampling bias to determine viral spread: Evaluating discrete phylogeography through CTMC modeling and structured coalescent model approximations.
Read more01 Dec 2022
publication
Transmission dynamics of Q fever in French Guiana: A population-based cross-sectional study.
Read more15 Aug 2022
publication
Analytical framework to evaluate and optimize the use of imperfect diagnostics to inform outbreak response: Application to the 2017 plague epidemic in Madagascar.
Read more19 May 2022
publication
Selection for infectivity profiles in slow and fast epidemics, and the rise of SARS-CoV-2 variants.
Read more03 May 2022
publication
An ensemble model based on early predictors to forecast COVID-19 health care demand in France.
Read more27 Apr 2022
publication
Global spatial dynamics and vaccine-induced fitness changes of Bordetella pertussis.
Read more23 Mar 2022
publication
Reconstructing antibody dynamics to estimate the risk of influenza virus infection.
Read more01 Feb 2022
01 Feb 2022
publication
Impact of SARS-CoV-2 Delta variant on incubation, transmission settings and vaccine effectiveness: Results from a nationwide case-control study in France.
Read more26 Jan 2022
publication
Epidemiology and control of SARS-CoV-2 epidemics in partially vaccinated populations: a modeling study applied to France.
Read more01 Jan 2022
publication
Impact of booster vaccination on the control of COVID-19 Delta wave in the context of waning immunity: application to France in the winter 2021/22.
Read more03 Dec 2021
publication
Emergence and global spread of Listeria monocytogenes main clinical clonal complex.
Read more01 Dec 2021
publication
Lockdown impact on age-specific contact patterns and behaviours, France, April 2020.
Read more25 Nov 2021
publication
SARS-CoV-2 transmission across age groups in France and implications for control.
Read more18 Nov 2021
publication
Model-based assessment of Chikungunya and O’nyong-nyong virus circulation in Mali in a serological cross-reactivity context.
Read more01 Sep 2021
publication
Impact of original, B.1.1.7, and B.1.351/P.1 SARS-CoV-2 lineages on vaccine effectiveness of two doses of COVID-19 mRNA vaccines: Results from a nationwide case-control study in France.
Read more20 Aug 2021
10 Aug 2021
01 Aug 2021
publication
A modelling study investigating short and medium-term challenges for COVID-19 vaccination: From prioritisation to the relaxation of measures.
Read more01 Aug 2021
publication
Evaluation of the extended efficacy of the Dengvaxia vaccine against symptomatic and subclinical dengue infection.
Read more01 Aug 2021
publication
Exposures associated with SARS-CoV-2 infection in France: A nationwide online case-control study.
Read more31 Jul 2021
26 Jul 2021
09 Jul 2021
publication
Transmission of antimicrobial resistant Yersinia pestis during a pneumonic plague outbreak.
Read more02 Jul 2021
01 Jul 2021
publication
Benefits and risks associated with different uses of the COVID-19 vaccine Vaxzevria: a modelling study, France, May to September 2021.
Read more17 Jun 2021
publication
Cold and dry winter conditions are associated with greater SARS-CoV-2 transmission at regional level in western countries during the first epidemic wave.
Read more01 Jun 2021
publication
Neonatal susceptibility to meningitis results from the immaturity of epithelial barriers and gut microbiota.
Read more01 Jun 2021
publication
Lockdown as a last resort option in case of COVID-19 epidemic rebound: a modelling study.
Read more01 Jun 2021
publication
Evolution of outcomes for patients hospitalised during the first 9 months of the SARS-CoV-2 pandemic in France: A retrospective national surveillance data analysis.
Read more01 Jun 2021
publication
Do not neglect SARS-CoV-2 hospitalization and fatality risks in the middle-aged adult population.
Read more01 May 2021
publication
Mathematical modelling and phylodynamics for the study of dog rabies dynamics and control: A scoping review.
Read more08 Apr 2021
publication
Monitoring the proportion of the population infected by SARS-CoV-2 using age-stratified hospitalisation and serological data: a modelling study.
Read more22 Mar 2021
publication
Reconstructing unseen transmission events to infer dengue dynamics from viral sequences.
Read more12 Mar 2021
publication
Evaluating the impact of curfews and other measures on SARS-CoV-2 transmission in French Guiana.
Read more01 Mar 2021
publication
The transfer and decay of maternal antibodies against enterovirus A71, and dynamics of antibodies due to later natural infections in Chinese infants: a longitudinal, paired mother-neonate cohort study.
Read more01 Mar 2021
publication
Early assessment of diffusion and possible expansion of SARS-CoV-2 Lineage 20I/501Y.V1 (B.1.1.7, variant of concern 202012/01) in France, January to March 2021.
Read more01 Feb 2021
01 Jan 2021
publication
Impact of mass testing during an epidemic rebound of SARS-CoV-2: a modelling study using the example of France.
Read more01 Jan 2021
publication
Couple oriented counselling improves male partner involvement in sexual and reproductive health of a couple: Evidence from the ANRS PRENAHTEST randomized trial.
Read more16 Nov 2020
01 Nov 2020
publication
Clustering and superspreading potential of SARS-CoV-2 infections in Hong Kong.
Read more10 Oct 2020
01 Oct 2020
publication
Towards better targeting: lessons from a posthoneymoon measles outbreak in Madagascar, 2018-2019.
Read more09 Sep 2020
01 Aug 2020
10 Jul 2020
06 Jul 2020
publication
Changing Contact Patterns Over Disease Progression: Nipah Virus as a Case Study.
Read more01 Jul 2020
01 Jul 2020
publication
Minimal transmission in an influenza A (H3N2) human challenge-transmission model within a controlled exposure environment.
Read more05 Jun 2020
publication
Reconstructing Mayaro virus circulation in French Guiana shows frequent spillovers.
Read more11 May 2020
publication
A Framework to Monitor Changes in Transmission and Epidemiology of Emerging Pathogens: Lessons From Nipah Virus.
Read more01 May 2020
publication
Risk for Transportation of Coronavirus Disease from Wuhan to Other Cities in China.
Read more01 May 2020
27 Apr 2020
publication
Dynamics of conflict during the Ebola outbreak in the Democratic Republic of the Congo 2018-2019.
Read more06 Mar 2020
publication
The effect of human mobility and control measures on the COVID-19 epidemic in China.
Read more01 Mar 2020
publication
Specificity, kinetics and longevity of antibody responses to avian influenza A(H7N9) virus infection in humans.
Read more17 Feb 2020
publication
Risk for Transportation of 2019 Novel Coronavirus (COVID-19) from Wuhan to Cities in China.
Read more14 Feb 2020
publication
Systematic selection between age and household structure for models aimed at emerging epidemic predictions.
Read more10 Feb 2020
publication
Changes in the Transmission Dynamic of Chikungunya Virus in Southeastern Senegal.
Read more01 Feb 2020
publication
Seroprevalence of hepatitis E virus among blood donors on Corsica, France, 2017.
Read more01 Dec 2019
01 Dec 2019
publication
Improved inference of time-varying reproduction numbers during infectious disease outbreaks.
Read more29 Nov 2019
01 Oct 2019
01 Sep 2019
publication
Highly pathogenic avian influenza H5N8 in south-west France 2016-2017: A modeling study of control strategies.
Read more01 Sep 2019
16 Aug 2019
publication
Impact of Zika Virus Emergence in French Guiana: A Large General Population Seroprevalence Survey.
Read more01 Jul 2019
publication
Assessing Zika Virus Transmission Within Households During an Outbreak in Martinique, 2015-2016.
Read more25 Jun 2019
event
CANCELLED – Lab Seminar in Global Health “Open data to accelerate the development and testing of dynamic models for global population health”
Read more14 May 2019
publication
Comparative Analysis of Eleven Healthcare-Associated Outbreaks of Middle East Respiratory Syndrome Coronavirus (Mers-Cov) from 2015 to 2017.
Read more09 May 2019
01 May 2019
publication
Publisher Correction: Past and future spread of the arbovirus vectors Aedes aegypti and Aedes albopictus.
Read more01 May 2019
publication
Publisher Correction: Past and future spread of the arbovirus vectors Aedes aegypti and Aedes albopictus.
Read more01 Apr 2019
publication
Spatio-temporal dynamics of dengue in Brazil: Seasonal travelling waves and determinants of regional synchrony.
Read more28 Mar 2019
publication
Epidemiological characteristics of an urban plague epidemic in Madagascar, August-November, 2017: an outbreak report.
Read more04 Mar 2019
publication
Past and future spread of the arbovirus vectors Aedes aegypti and Aedes albopictus.
Read more28 Feb 2019
project
Assessing the threat posed by zoonotic viruses like MERS-CoV, Nipah, Yellow Fever or plague
Read more28 Feb 2019
28 Feb 2019
project
Statistical and mathematical methods to characterize disease transmission from incomplete epidemiological data
Read more28 Feb 2019
28 Feb 2019
28 Feb 2019
06 Feb 2019
10 Jan 2019
publication
Indirect protection from vaccinating children against influenza in households.
Read more01 Jan 2019
publication
Reassessing Serosurvey-Based Estimates of the Symptomatic Proportion of Zika Virus Infections.
Read more21 Nov 2018
19 Nov 2018
publication
Humoral and cellular immune correlates of protection against bubonic plague by a live Yersinia pseudotuberculosis vaccine.
Read more16 Nov 2018
publication
Intradermal rabies post-exposure prophylaxis can be abridged with no measurable impact on clinical outcome in Cambodia, 2003-2014.
Read more05 Nov 2018
03 Oct 2018
publication
Projecting the end of the Zika virus epidemic in Latin America: a modelling analysis.
Read more01 Oct 2018
publication
Revealing Measles Outbreak Risk With a Nested Immunoglobulin G Serosurvey in Madagascar.
Read more25 Sep 2018
24 Aug 2018
23 Aug 2018
publication
Genomic and epidemiological monitoring of yellow fever virus transmission potential.
Read more21 Aug 2018
publication
Mapping influenza activity in emergency departments in France using Bayesian model-based geostatistics.
Read more01 Jun 2018
publication
Dengue serosurvey after a 2-month long outbreak in Nîmes, France, 2015: was there more than met the eye?
Read more23 May 2018
publication
Reconstruction of antibody dynamics and infection histories to evaluate dengue risk.
Read more17 May 2018
publication
Using serological studies to reconstruct the history of bluetongue epidemic in French cattle under successive vaccination campaigns.
Read more10 May 2018
11 Apr 2018
publication
Characterization of the Spatial and Temporal Distribution of Nipah Virus Spillover Events in Bangladesh, 2007-2013.
Read more01 Feb 2018
30 Jan 2018
publication
Infectious virus in exhaled breath of symptomatic seasonal influenza cases from a college community.
Read more15 Nov 2017
publication
Real-Time Assessment of Health-Care Requirements During the Zika Virus Epidemic in Martinique.
Read more01 Nov 2017
publication
The proportion of asymptomatic infections and spectrum of disease among pregnant women infected by Zika virus: systematic monitoring in French Guiana, 2016.
Read more24 May 2017
publication
Establishment and cryptic transmission of Zika virus in Brazil and the Americas.
Read more18 Mar 2017
17 Jan 2017
publication
Evaluating Hospital-Based Surveillance for Outbreak Detection in Bangladesh: Analysis of Healthcare Utilization Data.
Read more23 Dec 2016
publication
Spread of yellow fever virus outbreak in Angola and the Democratic Republic of the Congo 2015-16: a modelling study.
Read more07 Nov 2016
publication
How social structures, space, and behaviors shape the spread of infectious diseases using chikungunya as a case study
Read more25 Jul 2016
23 Jul 2016
publication
Could clinical symptoms be a predictor of complications in Zika virus infection? – Authors’ reply
Read more11 Jul 2016
publication
Estimating Dengue Transmission Intensity from Case-Notification Data from Multiple Countries
Read more06 May 2016
publication
Individual Correlates of Infectivity of Influenza A Virus Infections in Households
Read more08 Apr 2016
publication
Revealing the Micro-scale Signature of Endemic Zoonotic Disease Transmission in an African Urban Setting
Read more04 Apr 2016
publication
Estimating the Burden of Leptospirosis among Febrile Subjects Aged below 20 Years in Kampong Cham Communities, Cambodia, 2007-2009
Read more28 Mar 2016
publication
Quantifying homologous and heterologous antibody titre rises after influenza virus infection
Read more16 Mar 2016
publication
Association between Zika virus and microcephaly in French Polynesia, 2013-15: a retrospective study
Read more15 Mar 2016
publication
Association between Zika virus and microcephaly in French Polynesia, 2013-2015: a retrospective study
Read more04 Feb 2016
publication
Estimating the Severity and Subclinical Burden of Middle East Respiratory Syndrome Coronavirus Infection in the Kingdom of Saudi Arabia
Read more21 Jan 2016
publication
Model-Based Comprehensive Analysis of School Closure Policies for Mitigating Influenza Epidemics and Pandemics
Read more01 Jan 2016
01 Jan 2016
publication
Interpreting Seroepidemiologic Studies of Influenza in a Context of Nonbracketing Sera
Read more02 Dec 2015
publication
The environmental deposition of influenza virus from patients infected with influenza A(H1N1)pdm09: Implications for infection prevention and control
Read more01 Dec 2015
publication
Use of Viremia to Evaluate the Baseline Case Fatality Ratio of Ebola Virus Disease and Inform Treatment Studies: A Retrospective Cohort Study
Read more21 Nov 2015
25 Sep 2015
publication
Reconstruction of 60 Years of Chikungunya Epidemiology in the Philippines Demonstrates Episodic and Focal Transmission
Read more22 Sep 2015
publication
Comparative Epidemiology of Influenza B Yamagata- and Victoria-Lineage Viruses in Households
Read more11 Sep 2015
publication
Case-ascertained study of household transmission of seasonal influenza – South Africa, 2013
Read more11 May 2015
23 Apr 2015
publication
A change in vaccine efficacy and duration of protection explains recent rises in pertussis incidence in the United States
Read more16 Apr 2015
publication
Estimating dengue transmission intensity from sero-prevalence surveys in multiple countries
Read more15 Apr 2015
23 Jan 2015
publication
Chains of transmission and control of Ebola virus disease in Conakry, Guinea, in 2014: an observational study
Read more09 Dec 2014
publication
Genome sequencing defines phylogeny and spread of methicillin-resistant Staphylococcus aureus in a high transmission setting
Read more24 Nov 2014
publication
Estimating Potential Incidence of MERS-CoV Associated with Hajj Pilgrims to Saudi Arabia, 2014
Read more21 Nov 2014
25 Sep 2014
publication
Optimizing the precision of case fatality ratio estimates under the surveillance pyramid approach
Read more04 Sep 2014
publication
Estimates of the reproduction number for seasonal, pandemic, and zoonotic influenza: a systematic review of the literature
Read more21 Aug 2014
publication
Determinants of influenza transmission in South East Asia: insights from a household cohort study in Vietnam
Read more17 Jul 2014
13 Jun 2014
07 Jun 2014
publication
OutbreakTools: a new platform for disease outbreak analysis using the R software
Read more18 Apr 2014
publication
OutbreakTools: a new platform for disease outbreak analysis using the R software
Read more16 Apr 2014
publication
School closures during the 2009 influenza pandemic: national and local experiences
Read more26 Mar 2014
publication
Association between antibody titers and protection against influenza virus infection within households
Read more23 Jan 2014
publication
Bayesian reconstruction of disease outbreaks by combining epidemiologic and genomic data
Read more13 Nov 2013
publication
Middle East respiratory syndrome coronavirus: quantification of the extent of the epidemic, surveillance biases, and transmissibility
Read more15 Sep 2013
publication
A new framework and software to estimate time-varying reproduction numbers during epidemics
Read more05 Mar 2013
publication
Using routine surveillance data to estimate the epidemic potential of emerging zoonoses: application to the emergence of US swine origin influenza A H3N2v virus
Read more13 Dec 2012
publication
Influenza infection rates, measurement errors and the interpretation of paired serology
Read more07 Sep 2011
publication
Transmission characteristics of the 2009 H1N1 influenza pandemic: comparison of 8 Southern hemisphere countries.
Read more31 Jan 2011
publication
Role of social networks in shaping disease transmission during a community outbreak of 2009 H1N1 pandemic influenza
Read more31 Dec 2009
publication
Household transmission of 2009 pandemic influenza A (H1N1) virus in the United States
Read more11 May 2009
10 Apr 2008
publication