Timeline

Simon Cauchemez
Head of Structure
15 Aug 2022
publication

Analytical framework to evaluate and optimize the use of imperfect diagnostics to inform outbreak response: Application to the 2017 plague epidemic in Madagascar.

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19 May 2022
publication

Selection for infectivity profiles in slow and fast epidemics, and the rise of SARS-CoV-2 variants.

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03 May 2022
publication

An ensemble model based on early predictors to forecast COVID-19 health care demand in France.

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27 Apr 2022
publication

Global spatial dynamics and vaccine-induced fitness changes of Bordetella pertussis.

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23 Mar 2022
publication

Reconstructing antibody dynamics to estimate the risk of influenza virus infection.

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01 Feb 2022
publication

Early chains of transmission of COVID-19 in France, January to March 2020.

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01 Feb 2022
publication

Impact of SARS-CoV-2 Delta variant on incubation, transmission settings and vaccine effectiveness: Results from a nationwide case-control study in France.

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26 Jan 2022
publication

Epidemiology and control of SARS-CoV-2 epidemics in partially vaccinated populations: a modeling study applied to France.

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01 Jan 2022
publication

Impact of booster vaccination on the control of COVID-19 Delta wave in the context of waning immunity: application to France in the winter 2021/22.

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03 Dec 2021
publication

Emergence and global spread of Listeria monocytogenes main clinical clonal complex.

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01 Dec 2021
publication

Lockdown impact on age-specific contact patterns and behaviours, France, April 2020.

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25 Nov 2021
publication

SARS-CoV-2 transmission across age groups in France and implications for control.

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18 Nov 2021
publication

Model-based assessment of Chikungunya and O’nyong-nyong virus circulation in Mali in a serological cross-reactivity context.

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01 Sep 2021
publication

Impact of original, B.1.1.7, and B.1.351/P.1 SARS-CoV-2 lineages on vaccine effectiveness of two doses of COVID-19 mRNA vaccines: Results from a nationwide case-control study in France.

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20 Aug 2021
publication

Spatiotemporal invasion dynamics of SARS-CoV-2 lineage B.1.1.7 emergence.

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10 Aug 2021
publication

Managing COVID-19 importation risks in a heterogeneous world.

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01 Aug 2021
publication

Exposures associated with SARS-CoV-2 infection in France: A nationwide online case-control study.

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01 Aug 2021
publication

A modelling study investigating short and medium-term challenges for COVID-19 vaccination: From prioritisation to the relaxation of measures.

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01 Aug 2021
publication

Evaluation of the extended efficacy of the Dengvaxia vaccine against symptomatic and subclinical dengue infection.

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31 Jul 2021
publication

Education and mental health: good reasons to vaccinate children.

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26 Jul 2021
news

Benefits and risks associated with the COVID-19 vaccine Vaxzevria

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09 Jul 2021
publication

Transmission of antimicrobial resistant Yersinia pestis during a pneumonic plague outbreak.

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02 Jul 2021
publication

Spatial Distribution and Burden of Emerging Arboviruses in French Guiana.

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01 Jul 2021
publication

Benefits and risks associated with different uses of the COVID-19 vaccine Vaxzevria: a modelling study, France, May to September 2021.

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29 Jun 2021
publication

Neonatal susceptibility to meningitis results from the immaturity of epithelial barriers and gut microbiota.

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17 Jun 2021
publication

Cold and dry winter conditions are associated with greater SARS-CoV-2 transmission at regional level in western countries during the first epidemic wave.

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01 Jun 2021
publication

Do not neglect SARS-CoV-2 hospitalization and fatality risks in the middle-aged adult population.

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01 Jun 2021
publication

Lockdown as a last resort option in case of COVID-19 epidemic rebound: a modelling study.

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01 Jun 2021
publication

Evolution of outcomes for patients hospitalised during the first 9 months of the SARS-CoV-2 pandemic in France: A retrospective national surveillance data analysis.

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01 May 2021
publication

Mathematical modelling and phylodynamics for the study of dog rabies dynamics and control: A scoping review.

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08 Apr 2021
publication

Monitoring the proportion of the population infected by SARS-CoV-2 using age-stratified hospitalisation and serological data: a modelling study.

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22 Mar 2021
publication

Reconstructing unseen transmission events to infer dengue dynamics from viral sequences.

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12 Mar 2021
publication

Evaluating the impact of curfews and other measures on SARS-CoV-2 transmission in French Guiana.

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01 Mar 2021
publication

The transfer and decay of maternal antibodies against enterovirus A71, and dynamics of antibodies due to later natural infections in Chinese infants: a longitudinal, paired mother-neonate cohort study.

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01 Mar 2021
publication

Early assessment of diffusion and possible expansion of SARS-CoV-2 Lineage 20I/501Y.V1 (B.1.1.7, variant of concern 202012/01) in France, January to March 2021.

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01 Feb 2021
publication

Age-specific mortality and immunity patterns of SARS-CoV-2.

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01 Jan 2021
publication

Impact of mass testing during an epidemic rebound of SARS-CoV-2: a modelling study using the example of France.

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01 Jan 2021
publication

Couple oriented counselling improves male partner involvement in sexual and reproductive health of a couple: Evidence from the ANRS PRENAHTEST randomized trial.

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16 Nov 2020
publication

Seroprevalence of pertussis in Madagascar and implications for vaccination.

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01 Nov 2020
publication

Clustering and superspreading potential of SARS-CoV-2 infections in Hong Kong.

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10 Oct 2020
publication

Lockdown impact on COVID-19 epidemics in regions across metropolitan France.

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01 Oct 2020
publication

Towards better targeting: lessons from a posthoneymoon measles outbreak in Madagascar, 2018-2019.

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09 Sep 2020
publication

COVID-19 herd immunity: where are we?

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03 Aug 2020
project

Pasteur International Center for Research on Emerging Infectious Diseases

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01 Aug 2020
publication

Using Serology to Anticipate Measles Post-honeymoon Period Outbreaks.

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10 Jul 2020
publication

Estimating the burden of SARS-CoV-2 in France.

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06 Jul 2020
publication

Changing Contact Patterns Over Disease Progression: Nipah Virus as a Case Study.

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01 Jul 2020
publication

The epidemiology of hepatitis delta virus infection in Cameroon.

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01 Jul 2020
publication

Minimal transmission in an influenza A (H3N2) human challenge-transmission model within a controlled exposure environment.

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05 Jun 2020
publication

Reconstructing Mayaro virus circulation in French Guiana shows frequent spillovers.

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11 May 2020
publication

A Framework to Monitor Changes in Transmission and Epidemiology of Emerging Pathogens: Lessons From Nipah Virus.

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01 May 2020
publication

Risk for Transportation of Coronavirus Disease from Wuhan to Other Cities in China.

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01 May 2020
publication

Zika Virus Circulation in Mali.

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27 Apr 2020
publication

Dynamics of conflict during the Ebola outbreak in the Democratic Republic of the Congo 2018-2019.

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06 Mar 2020
publication

The effect of human mobility and control measures on the COVID-19 epidemic in China.

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01 Mar 2020
publication

Specificity, kinetics and longevity of antibody responses to avian influenza A(H7N9) virus infection in humans.

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17 Feb 2020
publication

Risk for Transportation of 2019 Novel Coronavirus (COVID-19) from Wuhan to Cities in China.

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14 Feb 2020
publication

Systematic selection between age and household structure for models aimed at emerging epidemic predictions.

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10 Feb 2020
publication

Changes in the Transmission Dynamic of Chikungunya Virus in Southeastern Senegal.

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01 Feb 2020
publication

Seroprevalence of hepatitis E virus among blood donors on Corsica, France, 2017.

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01 Dec 2019
publication

Predicting Dengue Outbreaks in Cambodia.

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01 Dec 2019
publication

Improved inference of time-varying reproduction numbers during infectious disease outbreaks.

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29 Nov 2019
news

Scientist recognized with Award in Global Health Department

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01 Oct 2019
publication

A network-based approach to modelling bluetongue spread in France.

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01 Sep 2019
publication

Highly pathogenic avian influenza H5N8 in south-west France 2016-2017: A modeling study of control strategies.

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01 Sep 2019
publication

Worldwide Reduction in MERS Cases and Deaths since 2016.

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16 Aug 2019
publication

Impact of Zika Virus Emergence in French Guiana: A Large General Population Seroprevalence Survey.

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01 Jul 2019
publication

Assessing Zika Virus Transmission Within Households During an Outbreak in Martinique, 2015-2016.

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25 Jun 2019
event

CANCELLED – Lab Seminar in Global Health “Open data to accelerate the development and testing of dynamic models for global population health”

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14 May 2019
publication

Comparative Analysis of Eleven Healthcare-Associated Outbreaks of Middle East Respiratory Syndrome Coronavirus (Mers-Cov) from 2015 to 2017.

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09 May 2019
publication

Transmission of Nipah Virus – 14 Years of Investigations in Bangladesh.

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01 May 2019
publication

Publisher Correction: Past and future spread of the arbovirus vectors Aedes aegypti and Aedes albopictus.

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01 May 2019
publication

Publisher Correction: Past and future spread of the arbovirus vectors Aedes aegypti and Aedes albopictus.

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01 Apr 2019
publication

Spatio-temporal dynamics of dengue in Brazil: Seasonal travelling waves and determinants of regional synchrony.

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28 Mar 2019
publication

Epidemiological characteristics of an urban plague epidemic in Madagascar, August-November, 2017: an outbreak report.

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04 Mar 2019
publication

Past and future spread of the arbovirus vectors Aedes aegypti and Aedes albopictus.

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28 Feb 2019
project

Assessing the threat posed by zoonotic viruses like MERS-CoV, Nipah, Yellow Fever or plague

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28 Feb 2019
project

Analysis and modelling to support decision making during epidemics

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28 Feb 2019
project

Statistical and mathematical methods to characterize disease transmission from incomplete epidemiological data

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28 Feb 2019
project

Developing a One Health perspective: the case of Nipah virus

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28 Feb 2019
project

Optimizing the interpretation of serological data

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28 Feb 2019
project

Use of sequences to identify drivers of pathogen spread

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06 Feb 2019
publication

How Modelling Can Enhance the Analysis of Imperfect Epidemic Data.

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10 Jan 2019
publication

Indirect protection from vaccinating children against influenza in households.

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01 Jan 2019
publication

Reassessing Serosurvey-Based Estimates of the Symptomatic Proportion of Zika Virus Infections.

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21 Nov 2018
publication

Improving the provision of rabies post-exposure prophylaxis.

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19 Nov 2018
publication

Humoral and cellular immune correlates of protection against bubonic plague by a live Yersinia pseudotuberculosis vaccine.

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16 Nov 2018
publication

Intradermal rabies post-exposure prophylaxis can be abridged with no measurable impact on clinical outcome in Cambodia, 2003-2014.

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05 Nov 2018
publication

Reconstruction and prediction of viral disease epidemics.

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03 Oct 2018
publication

Projecting the end of the Zika virus epidemic in Latin America: a modelling analysis.

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01 Oct 2018
publication

Revealing Measles Outbreak Risk With a Nested Immunoglobulin G Serosurvey in Madagascar.

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25 Sep 2018
publication

Estimating sources and sinks of malaria parasites in Madagascar.

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24 Aug 2018
publication

Enterovirus outbreak dynamics.

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23 Aug 2018
publication

Genomic and epidemiological monitoring of yellow fever virus transmission potential.

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21 Aug 2018
publication

Mapping influenza activity in emergency departments in France using Bayesian model-based geostatistics.

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01 Jun 2018
publication

Dengue serosurvey after a 2-month long outbreak in Nîmes, France, 2015: was there more than met the eye?

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23 May 2018
publication

Reconstruction of antibody dynamics and infection histories to evaluate dengue risk.

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17 May 2018
publication

Using serological studies to reconstruct the history of bluetongue epidemic in French cattle under successive vaccination campaigns.

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10 May 2018
publication

Ambient ozone and influenza transmissibility in Hong Kong.

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11 Apr 2018
publication

Characterization of the Spatial and Temporal Distribution of Nipah Virus Spillover Events in Bangladesh, 2007-2013.

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01 Feb 2018
publication

Spatial and temporal dynamics of malaria in Madagascar.

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30 Jan 2018
publication

Infectious virus in exhaled breath of symptomatic seasonal influenza cases from a college community.

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15 Nov 2017
publication

Real-Time Assessment of Health-Care Requirements During the Zika Virus Epidemic in Martinique.

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01 Nov 2017
publication

The proportion of asymptomatic infections and spectrum of disease among pregnant women infected by Zika virus: systematic monitoring in French Guiana, 2016.

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24 May 2017
publication

Establishment and cryptic transmission of Zika virus in Brazil and the Americas.

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18 Mar 2017
project

Improved understanding of patterns of pathogen infection risk

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17 Jan 2017
publication

Evaluating Hospital-Based Surveillance for Outbreak Detection in Bangladesh: Analysis of Healthcare Utilization Data.

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23 Dec 2016
publication

Spread of yellow fever virus outbreak in Angola and the Democratic Republic of the Congo 2015-16: a modelling study.

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07 Nov 2016
publication

How social structures, space, and behaviors shape the spread of infectious diseases using chikungunya as a case study

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25 Jul 2016
publication

Unraveling the drivers of MERS-CoV transmission

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23 Jul 2016
publication

Could clinical symptoms be a predictor of complications in Zika virus infection? – Authors’ reply

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11 Jul 2016
publication

Estimating Dengue Transmission Intensity from Case-Notification Data from Multiple Countries

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06 May 2016
publication

Individual Correlates of Infectivity of Influenza A Virus Infections in Households

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08 Apr 2016
publication

Revealing the Micro-scale Signature of Endemic Zoonotic Disease Transmission in an African Urban Setting

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04 Apr 2016
publication

Estimating the Burden of Leptospirosis among Febrile Subjects Aged below 20 Years in Kampong Cham Communities, Cambodia, 2007-2009

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28 Mar 2016
publication

Quantifying homologous and heterologous antibody titre rises after influenza virus infection

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16 Mar 2016
publication

Association between Zika virus and microcephaly in French Polynesia, 2013-15: a retrospective study

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15 Mar 2016
publication

Association between Zika virus and microcephaly in French Polynesia, 2013-2015: a retrospective study

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04 Feb 2016
publication

Estimating the Severity and Subclinical Burden of Middle East Respiratory Syndrome Coronavirus Infection in the Kingdom of Saudi Arabia

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21 Jan 2016
publication

Model-Based Comprehensive Analysis of School Closure Policies for Mitigating Influenza Epidemics and Pandemics

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01 Jan 2016
publication

Seroepidemiology of Human Enterovirus 71 Infection among Children, Cambodia

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01 Jan 2016
publication

Interpreting Seroepidemiologic Studies of Influenza in a Context of Nonbracketing Sera

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02 Dec 2015
publication

The environmental deposition of influenza virus from patients infected with influenza A(H1N1)pdm09: Implications for infection prevention and control

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01 Dec 2015
publication

Use of Viremia to Evaluate the Baseline Case Fatality Ratio of Ebola Virus Disease and Inform Treatment Studies: A Retrospective Cohort Study

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21 Nov 2015
publication

Household Transmission of Influenza Virus

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25 Sep 2015
publication

Reconstruction of 60 Years of Chikungunya Epidemiology in the Philippines Demonstrates Episodic and Focal Transmission

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22 Sep 2015
publication

Comparative Epidemiology of Influenza B Yamagata- and Victoria-Lineage Viruses in Households

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11 Sep 2015
publication

Case-ascertained study of household transmission of seasonal influenza – South Africa, 2013

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11 May 2015
team

Mathematical Modelling Of Infectious Diseases

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23 Apr 2015
publication

A change in vaccine efficacy and duration of protection explains recent rises in pertussis incidence in the United States

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16 Apr 2015
publication

Estimating dengue transmission intensity from sero-prevalence surveys in multiple countries

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15 Apr 2015
publication

Influenza A Virus Shedding and Infectivity in Households

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23 Jan 2015
publication

Chains of transmission and control of Ebola virus disease in Conakry, Guinea, in 2014: an observational study

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09 Dec 2014
publication

Genome sequencing defines phylogeny and spread of methicillin-resistant Staphylococcus aureus in a high transmission setting

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24 Nov 2014
publication

Estimating Potential Incidence of MERS-CoV Associated with Hajj Pilgrims to Saudi Arabia, 2014

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21 Nov 2014
publication

Causal analysis of H1N1pdm09 influenza infection risk in a household cohort

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25 Sep 2014
publication

Optimizing the precision of case fatality ratio estimates under the surveillance pyramid approach

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04 Sep 2014
publication

Estimates of the reproduction number for seasonal, pandemic, and zoonotic influenza: a systematic review of the literature

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21 Aug 2014
publication

Determinants of influenza transmission in South East Asia: insights from a household cohort study in Vietnam

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17 Jul 2014
publication

Local and regional spread of chikungunya fever in the Americas

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13 Jun 2014
publication

Public health. Measuring the path toward malaria elimination

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07 Jun 2014
publication

OutbreakTools: a new platform for disease outbreak analysis using the R software

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18 Apr 2014
publication

OutbreakTools: a new platform for disease outbreak analysis using the R software

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16 Apr 2014
publication

School closures during the 2009 influenza pandemic: national and local experiences

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26 Mar 2014
publication

Association between antibody titers and protection against influenza virus infection within households

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23 Jan 2014
publication

Bayesian reconstruction of disease outbreaks by combining epidemiologic and genomic data

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13 Nov 2013
publication

Middle East respiratory syndrome coronavirus: quantification of the extent of the epidemic, surveillance biases, and transmissibility

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15 Sep 2013
publication

A new framework and software to estimate time-varying reproduction numbers during epidemics

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05 Mar 2013
publication

Using routine surveillance data to estimate the epidemic potential of emerging zoonoses: application to the emergence of US swine origin influenza A H3N2v virus

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13 Dec 2012
publication

Influenza infection rates, measurement errors and the interpretation of paired serology

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07 Sep 2011
publication

Transmission characteristics of the 2009 H1N1 influenza pandemic: comparison of 8 Southern hemisphere countries.

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31 Jan 2011
publication

Role of social networks in shaping disease transmission during a community outbreak of 2009 H1N1 pandemic influenza

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31 Dec 2009
publication

Household transmission of 2009 pandemic influenza A (H1N1) virus in the United States

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11 May 2009
publication

Pandemic potential of a strain of influenza A (H1N1): early findings

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10 Apr 2008
publication

Estimating the impact of school closure on influenza transmission from Sentinel data

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