Timeline

Marc Eloit

Head of Structure

01 Jan 2024

publication

A quantitative assay for the assessment of cutaneous human papillomaviruses and polyomaviruses over time: A proof-of-concept in two patients with atopic dermatitis and psoriasis.

01 Dec 2023

publication

Performance of clinical metagenomics in France: a prospective observational study.

19 Nov 2023

publication

Human Circovirus is not detected in plasma pools for fractionation.

08 Sep 2023

publication

Genotype and Phenotype Characterization of Rhinolophus sp. Sarbecoviruses from Vietnam: Implications for Coronavirus Emergence.

01 Sep 2023

publication

Comprehensive Characterization of Viral Diversity of Female Mosquitoes in Madagascar

22 Aug 2023

publication

Chronic Aichi Virus Infection As a Cause of Long-Lasting Multiorgan Involvement in Patients With Primary Immune Deficiencies.

17 Jul 2023

publication

Evaluation of a viral transcriptome Next Generation Sequencing assay as an alternative to animal assays for viral safety testing of cell substrates.

01 Jun 2023

publication

Late-onset enteric virus infection associated with hepatitis (EVAH) in transplanted SCID patients.

01 Jun 2023

publication

Acute tubulointerstitial nephritis with or without uveitis: a novel form of post-acute COVID-19 syndrome in children.

24 May 2023

publication

Virus Pop—Expanding Viral Databases by Protein Sequence Simulation

05 Apr 2023

publication

SARS‐CoV‐2‐related bat virus behavior in human‐relevant models sheds light on the origin of COVID‐19

10 Feb 2023

publication

Golgi localization of SARS-CoV-2 spike protein and interaction with furin in cerebral COVID-19 microangiopathy: a clue to the central nervous system involvement?

13 Jan 2023

publication

A Search for Tick-Associated, Bronnoya-like Virus Spillover into Sheep

03 Jan 2023

publication

Circovirus Hepatitis Infection in Heart-Lung Transplant Patient, France.

07 Oct 2022

software

Microseek: A Metagenomic Pipeline for Virus Diagnostic and Discovery

14 Sep 2022

publication

Fetal Zika virus infection diagnosed by metagenomic next-generation sequencing in amniotic fluid.

08 Sep 2022

publication

Microseek: A Protein-Based Metagenomic Pipeline for Virus Diagnostic and Discovery.

01 Jul 2022

publication

Childhood encephalitis in the Greater Mekong region (the SouthEast Asia Encephalitis Project): a multicentre prospective study.

14 Apr 2022

publication

Bat coronaviruses related to SARS-CoV-2 and infectious for human cells.

07 Jun 2021

news

Rare case of death following infection by a bat-borne virus related to rabies

18 May 2021

publication

Identification of Umbre Orthobunyavirus as a Novel Zoonotic Virus Responsible for Lethal Encephalitis in 2 French Patients With Hypogammaglobulinemia

15 May 2021

publication

First case of lethal encephalitis in Western Europe due to European bat lyssavirus type 1.

11 Apr 2021

publication

The virome of Rhipicephalus, Dermacentor and Haemaphysalis ticks from Eastern Romania includes novel viruses with potential relevance for public health.

01 Apr 2021

publication

SARS-CoV-2 infection in schools in a northern French city: a retrospective serological cohort study in an area of high transmission, France, January to April 2020

07 Feb 2021

publication

Deep Impact of Random Amplification and Library Construction Methods on Viral Metagenomics Results

02 Sep 2020

publication

A comparison of four serological assays for detecting anti–SARS-CoV-2 antibodies in human serum samples from different populations

29 Apr 2020

publication

Investigation of viral etiology in potentially malignant disorders and oral squamous cell carcinomas in non-smoking, non-drinking patients

01 Jan 2020

publication

Absence of SARS-CoV-2 infection in cats and dogs in close contact with a cluster of COVID-19 patients in a veterinary campus.

12 Aug 2019

publication

Broad-Range Papillomavirus Transcriptome as a Biomarker of Papillomavirus-Associated Cervical High-Grade Cytology

04 Jul 2019

publication

No evidence for viral transcripts in dermatofibrosarcoma protuberans

05 Jun 2019

publication

Adventitious Virus Detection in Cells by High-Throughput Sequencing of Newly Synthesized RNAs: Unambiguous Differentiation of Cell Infection from Carryover of Viral Nucleic Acids

15 Apr 2019

publication

Cutaneous granulomas with primary immunodeficiency in children: a report of 17 new patients and a review of the literature

13 Apr 2019

publication

Use of a new RNA next generation sequencing approach for the specific detection of virus infection in cells

24 Jan 2019

publication

Outcomes for Nitazoxanide Treatment in a Case Series of Patients with Primary Immunodeficiencies and Rubella Virus-Associated Granuloma

10 Jan 2019

publication

Metagenomic analysis identifies human adenovirus 31 in children with acute flaccid paralysis in Tunisia

03 Jan 2019

publication

Rubella Virus-Associated Cutaneous Granulomatous Disease: a Unique Complication in Immune-Deficient Patients, Not Limited to DNA Repair Disorders

16 Oct 2018

publication

Current Perspectives on High-Throughput Sequencing (HTS) for Adventitious Virus Detection: Upstream Sample Processing and Library Preparation

01 Aug 2018

publication

Hypoglycemic Toxins and Enteroviruses as Causes of Outbreaks of Acute Encephalitis-Like Syndrome in Children, Bac Giang Province, Northern Vietnam

26 Mar 2018

publication

Emergence of two Usutu virus lineages in Culex pipiens mosquitoes in the Camargue, France, 2015

02 Nov 2017

publication

Experimental transfusion of variant CJD-infected blood reveals previously uncharacterised prion disorder in mice and macaque

02 Oct 2017

publication

No Viral Transcripts Associated with Folliculotropic Mycosis Fungoides Using a High Throughput Sequencing Approach

01 Aug 2017

publication

Untargeted next-generation sequencing-based first-line diagnosis of infection in immunocompromised adults: a multicentre, blinded, prospective study

24 May 2017

publication

Aetiology of acute meningoencephalitis in Cambodian children, 2010-2013.

31 Mar 2017

publication

Identification and prevalence of swine pasivirus 1 in eastern Romanian pig farms

12 Jan 2017

publication

Astrovirus Diagnostics.

01 Jan 2017

publication

Cutaneous and Visceral Chronic Granulomatous Disease Triggered by a Rubella Virus Vaccine Strain in Children With Primary Immunodeficiencies.

21 Sep 2016

publication

Molecular epidemiology of human enterovirus 71 at the origin of an epidemic of fatal hand, foot and mouth disease cases in Cambodia

09 Jun 2016

publication

Evidence of human infection by a new mammarenavirus endemic to Southeastern Asia

16 Mar 2016

publication

Viral metagenomics applied to blood donors and recipients at high risk for blood-borne infections

05 Mar 2016

publication

Diversity of viruses in Ixodes ricinus, and characterization of a neurotropic strain of Eyach virus

09 Jan 2016

publication

Viral metagenomics and blood safety

01 Sep 2015

publication

Next-Generation Sequencing for Diagnosis and Tailored Therapy: A Case Report of Astrovirus-Associated Progressive Encephalitis.

18 Aug 2015

publication

A Comparison between Transcriptome Sequencing and 16S Metagenomics for Detection of Bacterial Pathogens in Wildlife

31 Jul 2015

publication

Chicken skin virome analyzed by high-throughput sequencing shows a composition highly different from human skin

03 Jun 2015

publication

Antibodies to VP1 of swine pasivirus in humans without evidence of transmission from a pig source

11 May 2015

team

Biology of infection

29 Apr 2015

publication

Borna disease virus phosphoprotein impairs the developmental program controlling neurogenesis and reduces human GABAergic neurogenesis

01 Jan 2015

publication

How a multidisciplinary ‘One Health’ approach can combat the tick-borne pathogen threat in Europe

01 Jan 2015

publication

The potential of whole genome NGS for infectious disease diagnosis.

15 Nov 2014

publication

Viral diversity in swine intestinal mucus used for the manufacture of heparin as analyzed by high-throughput sequencing

01 Nov 2014

publication

Whole genome: next-generation sequencing as a virus safety test for biotechnological products

01 Oct 2014

publication

Live rubella virus vaccine long-term persistence as an antigenic trigger of cutaneous granulomas in patients with primary immunodeficiency.

13 Jun 2014

publication

Analysis by high throughput sequencing of Specific Pathogen Free eggs

22 Mar 2014

publication

Unbiased analysis by high throughput sequencing of the viral diversity in fetal bovine serum and trypsin used in cell culture

09 Oct 2013

publication

Infection of cats with atypical feline coronaviruses harbouring a truncated form of the canine type I non-structural ORF3 gene

01 Oct 2013

publication

The human virome: new tools and concepts.

28 May 2013

publication

[Pathology and viral metagenomics, a recent history]

01 Dec 2012

publication

Zoonotic transmission of pathogens by Ixodes ricinus ticks, Romania

25 Oct 2012

publication

No evidence for viral sequences in mycosis fungoides and Sézary syndrome skin lesions: a high-throughput sequencing approach

11 Jul 2012

publication

A member of a new Picornaviridae genus is shed in pig feces

19 Jun 2012

publication

Human skin microbiota: high diversity of DNA viruses identified on the human skin by high throughput sequencing

01 Jun 2012

publication

Human gyrovirus DNA in human blood, Italy

28 Mar 2012

publication

Identical consensus sequence and conserved genomic polymorphism of hepatitis E virus during controlled interspecies transmission

21 Dec 2011

publication

Borna disease virus infects human neural progenitor cells and impairs neurogenesis

11 Sep 2011

project

Enterovirus EV71 pathogenesis

01 Sep 2011

publication

Evaluation of high-throughput sequencing for identifying known and unknown viruses in biological samples.

04 May 2011

publication

Identification of a novel neuropathogenic Theiler’s murine encephalomyelitis virus

10 Jun 2010

project

A little guide for advanced search:

A quantitative assay for the assessment of cutaneous human papillomaviruses and polyomaviruses over time: A proof-of-concept in two patients with atopic dermatitis and psoriasis.

Performance of clinical metagenomics in France: a prospective observational study.

Human Circovirus is not detected in plasma pools for fractionation.

Genotype and Phenotype Characterization of Rhinolophus sp. Sarbecoviruses from Vietnam: Implications for Coronavirus Emergence.

Comprehensive Characterization of Viral Diversity of Female Mosquitoes in Madagascar

Chronic Aichi Virus Infection As a Cause of Long-Lasting Multiorgan Involvement in Patients With Primary Immune Deficiencies.

Evaluation of a viral transcriptome Next Generation Sequencing assay as an alternative to animal assays for viral safety testing of cell substrates.

Late-onset enteric virus infection associated with hepatitis (EVAH) in transplanted SCID patients.

Acute tubulointerstitial nephritis with or without uveitis: a novel form of post-acute COVID-19 syndrome in children.

Virus Pop—Expanding Viral Databases by Protein Sequence Simulation

SARS‐CoV‐2‐related bat virus behavior in human‐relevant models sheds light on the origin of COVID‐19

Golgi localization of SARS-CoV-2 spike protein and interaction with furin in cerebral COVID-19 microangiopathy: a clue to the central nervous system involvement?

A Search for Tick-Associated, Bronnoya-like Virus Spillover into Sheep

Circovirus Hepatitis Infection in Heart-Lung Transplant Patient, France.

Microseek: A Metagenomic Pipeline for Virus Diagnostic and Discovery

Fetal Zika virus infection diagnosed by metagenomic next-generation sequencing in amniotic fluid.

Microseek: A Protein-Based Metagenomic Pipeline for Virus Diagnostic and Discovery.

Childhood encephalitis in the Greater Mekong region (the SouthEast Asia Encephalitis Project): a multicentre prospective study.

Bat coronaviruses related to SARS-CoV-2 and infectious for human cells.

Rare case of death following infection by a bat-borne virus related to rabies

Identification of Umbre Orthobunyavirus as a Novel Zoonotic Virus Responsible for Lethal Encephalitis in 2 French Patients With Hypogammaglobulinemia

First case of lethal encephalitis in Western Europe due to European bat lyssavirus type 1.

The virome of Rhipicephalus, Dermacentor and Haemaphysalis ticks from Eastern Romania includes novel viruses with potential relevance for public health.

SARS-CoV-2 infection in schools in a northern French city: a retrospective serological cohort study in an area of high transmission, France, January to April 2020

Deep Impact of Random Amplification and Library Construction Methods on Viral Metagenomics Results

A comparison of four serological assays for detecting anti–SARS-CoV-2 antibodies in human serum samples from different populations

Investigation of viral etiology in potentially malignant disorders and oral squamous cell carcinomas in non-smoking, non-drinking patients

Absence of SARS-CoV-2 infection in cats and dogs in close contact with a cluster of COVID-19 patients in a veterinary campus.

Broad-Range Papillomavirus Transcriptome as a Biomarker of Papillomavirus-Associated Cervical High-Grade Cytology

No evidence for viral transcripts in dermatofibrosarcoma protuberans

Adventitious Virus Detection in Cells by High-Throughput Sequencing of Newly Synthesized RNAs: Unambiguous Differentiation of Cell Infection from Carryover of Viral Nucleic Acids

Cutaneous granulomas with primary immunodeficiency in children: a report of 17 new patients and a review of the literature

Use of a new RNA next generation sequencing approach for the specific detection of virus infection in cells

Outcomes for Nitazoxanide Treatment in a Case Series of Patients with Primary Immunodeficiencies and Rubella Virus-Associated Granuloma

Metagenomic analysis identifies human adenovirus 31 in children with acute flaccid paralysis in Tunisia

Rubella Virus-Associated Cutaneous Granulomatous Disease: a Unique Complication in Immune-Deficient Patients, Not Limited to DNA Repair Disorders

Current Perspectives on High-Throughput Sequencing (HTS) for Adventitious Virus Detection: Upstream Sample Processing and Library Preparation

Hypoglycemic Toxins and Enteroviruses as Causes of Outbreaks of Acute Encephalitis-Like Syndrome in Children, Bac Giang Province, Northern Vietnam

Emergence of two Usutu virus lineages in Culex pipiens mosquitoes in the Camargue, France, 2015

Experimental transfusion of variant CJD-infected blood reveals previously uncharacterised prion disorder in mice and macaque

No Viral Transcripts Associated with Folliculotropic Mycosis Fungoides Using a High Throughput Sequencing Approach

Untargeted next-generation sequencing-based first-line diagnosis of infection in immunocompromised adults: a multicentre, blinded, prospective study

Aetiology of acute meningoencephalitis in Cambodian children, 2010-2013.

Identification and prevalence of swine pasivirus 1 in eastern Romanian pig farms

Astrovirus Diagnostics.

Cutaneous and Visceral Chronic Granulomatous Disease Triggered by a Rubella Virus Vaccine Strain in Children With Primary Immunodeficiencies.

Molecular epidemiology of human enterovirus 71 at the origin of an epidemic of fatal hand, foot and mouth disease cases in Cambodia

Evidence of human infection by a new mammarenavirus endemic to Southeastern Asia

Viral metagenomics applied to blood donors and recipients at high risk for blood-borne infections

Diversity of viruses in Ixodes ricinus, and characterization of a neurotropic strain of Eyach virus

Viral metagenomics and blood safety

Next-Generation Sequencing for Diagnosis and Tailored Therapy: A Case Report of Astrovirus-Associated Progressive Encephalitis.

A Comparison between Transcriptome Sequencing and 16S Metagenomics for Detection of Bacterial Pathogens in Wildlife

Chicken skin virome analyzed by high-throughput sequencing shows a composition highly different from human skin

Antibodies to VP1 of swine pasivirus in humans without evidence of transmission from a pig source

Biology of infection

Borna disease virus phosphoprotein impairs the developmental program controlling neurogenesis and reduces human GABAergic neurogenesis

How a multidisciplinary ‘One Health’ approach can combat the tick-borne pathogen threat in Europe

The potential of whole genome NGS for infectious disease diagnosis.

Viral diversity in swine intestinal mucus used for the manufacture of heparin as analyzed by high-throughput sequencing

Whole genome: next-generation sequencing as a virus safety test for biotechnological products

Live rubella virus vaccine long-term persistence as an antigenic trigger of cutaneous granulomas in patients with primary immunodeficiency.

Analysis by high throughput sequencing of Specific Pathogen Free eggs

Unbiased analysis by high throughput sequencing of the viral diversity in fetal bovine serum and trypsin used in cell culture

Infection of cats with atypical feline coronaviruses harbouring a truncated form of the canine type I non-structural ORF3 gene

The human virome: new tools and concepts.

[Pathology and viral metagenomics, a recent history]

Zoonotic transmission of pathogens by Ixodes ricinus ticks, Romania

No evidence for viral sequences in mycosis fungoides and Sézary syndrome skin lesions: a high-throughput sequencing approach

A member of a new Picornaviridae genus is shed in pig feces

Human skin microbiota: high diversity of DNA viruses identified on the human skin by high throughput sequencing

Human gyrovirus DNA in human blood, Italy

Identical consensus sequence and conserved genomic polymorphism of hepatitis E virus during controlled interspecies transmission

Borna disease virus infects human neural progenitor cells and impairs neurogenesis

Enterovirus EV71 pathogenesis

Evaluation of high-throughput sequencing for identifying known and unknown viruses in biological samples.

Identification of a novel neuropathogenic Theiler’s murine encephalomyelitis virus

Pathogen discovery