Timeline
Benno Schwikowski
Head of Structure
20 Jun 2022
publication
Variability of Primary Sjögren’s Syndrome Is Driven by Interferon-α and Interferon-α Blood Levels Are Associated With the Class II HLA-DQ Locus.
Read more04 Apr 2022
project
DECIDER: artificial intelligence to improve diagnosis and treatment of ovarian cancer
Read more04 Apr 2022
17 Jan 2022
publication
An overview of machine learning methods for monotherapy drug response prediction.
Read more08 Nov 2021
29 Oct 2021
01 Aug 2021
11 Jun 2021
news
DECIDER: artificial intelligence to improve diagnosis and treatment of ovarian cancer
Read more05 Mar 2021
25 Jun 2020
09 Mar 2020
publication
Bystander IFN-γ activity promotes widespread and sustained cytokine signaling altering the tumor microenvironment
Read more01 Mar 2020
publication
Bystander IFN-γ activity promotes widespread and sustained cytokine signaling altering the tumor microenvironment.
Read more01 Oct 2019
18 Sep 2019
10 Sep 2019
project
New clinical endpoints in primary Sjögren’s Syndrome: an interventional trial based on stratifying patients (NECESSITY)
Read more01 Feb 2019
publication
Single-Cell Analysis of Diverse Pathogen Responses Defines a Molecular Roadmap for Generating Antigen-Specific Immunity
Read more24 Oct 2018
publication
A crowdsourced analysis to identify ab initio molecular signatures predictive of susceptibility to viral infection.
Read more27 Jul 2018
publication
Human genetic variants and age are the strongest predictors of humoral immune responses to common pathogens and vaccines.
Read more20 Jun 2018
15 Mar 2018
project
Comprehensive characterization and effective combinatorial targeting of high-grade serous ovarian cancer via single-cell analysis (HERCULES)
Read more01 Mar 2018
publication
Natural variation in the parameters of innate immune cells is preferentially driven by genetic factors.
Read more16 Jan 2018
publication
Distinctive roles of age, sex, and genetics in shaping transcriptional variation of human immune responses to microbial challenges.
Read more26 Sep 2017
26 Sep 2017
21 Sep 2017
publication
Network module identification-A widespread theoretical bias and best practices
Read more21 Jul 2017
publication
Common and phylogenetically widespread coding for peptides by bacterial small RNAs
Read more01 Mar 2017
08 Dec 2016
publication
From the exposome to mechanistic understanding of chemical-induced adverse effects
Read more14 Nov 2016
10 May 2016
project
Systems biology of cell infection by the bacterial pathogen Listeria monocytogenes
Read more05 Oct 2015
29 Jun 2015
publication
Bacterial Internalization, Localization, and Effectors Shape the Epithelial Immune Response during Shigella flexneri Infection
Read more15 Jun 2015
11 May 2015
01 Apr 2015
publication
Automated flow cytometric analysis across large numbers of samples and cell types.
Read more06 Feb 2015
publication
Filter-free exhaustive odds ratio-based genome-wide interaction approach pinpoints evidence for interaction in the HLA region in psoriasis
Read more18 Dec 2014
01 Jul 2014
09 Dec 2013
17 Jul 2013
publication
TLM-Quant: an open-source pipeline for visualization and quantification of gene expression heterogeneity in growing microbial cells
Read more01 Apr 2013
publication
Identification of additional proteins in differential proteomics using protein interaction networks
Read more07 Nov 2012
publication
Automated Phosphopeptide Identification Using Multiple MS/MS Fragmentation Modes
Read more13 Mar 2012
01 Mar 2012
publication
Condition-dependent transcriptome reveals high-level regulatory architecture in Bacillus subtilis
Read more01 Mar 2012
publication
Global network reorganization during dynamic adaptations of Bacillus subtilis metabolism
Read more01 Jan 2012
06 Dec 2010
11 May 2010
01 May 2010
publication
MUDE: a new approach for optimizing sensitivity in the target-decoy search strategy for large-scale peptide/protein identification
Read more26 Sep 2008
01 Feb 2008
publication
Alignment of LC-MS images, with applications to biomarker discovery and protein identification
Read more07 Jul 2007
publication
Assessing bias in experiment design for large scale mass spectrometry-based quantitative proteomics
Read more01 Jan 2007
30 Jul 2006
03 Nov 2005
01 Nov 2005
publication
ProbIDtree: an automated software program capable of identifying multiple peptides from a single collision-induced dissociation spectrum collected by a tandem mass spectrometer
Read more20 Jun 2005
publication
Tools enabling the elucidation of molecular pathways active in human disease: application to Hepatitis C virus infection
Read more01 Aug 2004
01 Jan 2004
01 Nov 2003
publication
Cytoscape: a software environment for integrated models of biomolecular interaction networks
Read more01 Jan 2003
01 Oct 2002
publication
ProbID: a probabilistic algorithm to identify peptides through sequence database searching using tandem mass spectral data
Read more01 Jan 2002
publication
Discovering regulatory and signalling circuits in molecular interaction networks
Read more01 Jan 2002
01 Dec 2000
01 Jan 2000
01 Jan 2000
publication
An exact algorithm to identify motifs in orthologous sequences from multiple species
Read more01 Jan 1997