Platform
Data visualization tools [134]
Software
Cytoscape: Visualization and analysis of omics data in interaction networks
Benno Schwikowski
Software
Icy: an open community platform for bioimage informatics
Stéphane Dallongeville
Project
Multiple spot tracking in 3D+t microscopy
Jean-Christophe Olivo-Marin
Project
Color image analysis in histology
Vannary Meas-Yedid Hardy
Project
Nuclear architecture and function
Christophe Zimmer
Research Engineer
Fabrice de Chaumont
Human Genetics and Cognitive Functions
Academic background During his PhD in robotics (Amiens, Berck), FdC conceived an autonomous robot designed to help disabled people, and especially paraplegics. The robot used omnidirectional vision sensor to SLAM and navigated automatically in […]
Research Engineer
Varun Khanna
Bioinformatics and Biostatistics HUB
With Master 2 in Biology-Computer Science obtained from Paris VII Diderot (“mention Bien”) in 2012, I did my internship in R. Brosch’s unit at the Pasteur Institute where I worked on de novo assembly […]
Research Engineer
Damien Mornico
Microbial Paleogenomics
Graduated in “Structural Genomics and Bioinformatics”, I mainly worked during almost 6 years at the Genoscope (CEA) in the LABGeM team, within the microbial annotation platform MicroScope. I specifically focused on functional annotation and […]
Research Engineer
Rachel Torchet
Expertise group : WINTER – Web integration
In 2012 I completed my master degree at the MicroScope Platform located at Genoscope (the French National Sequencing Center). I was involved in a project aiming at the management of evolution projects which rely […]
Research Engineer
Pierre Lechat
Expertise group : ALPS – Algorithmics and programming in science
I have been involved in genomic projects for prokaryotic and human genetic studies (GWAS) since 1998. Currently, I am working on novel visualization techniques to explore large and highly complex data sets. I have […]
Research Engineer
Thomas Faux
Epidemiology and modelling of bacterial escape to antimicrobials
Research Engineer
Hervé Menager
Expertise group : WINTER – Web integration
After an initial degree in Biology, I started my professional career as a software developer. Following the completion of my software engineering degree at the CNAM, I joined the Institut Pasteur, where I initially […]
Research Engineer
Corinne Maufrais
Expertise group: Genomics
Research Engineer
Olivia Doppelt-Azeroual
Expertise group : WINTER – Web integration
ONGOING PROJECTS Galaxy administration/Maintenance (https://galaxy.web.pasteur.fr) Bioweb: Future directory of bioinformatics resources at the Institut Pasteur ELIXIR Registry SKILLS Galaxy: administration, API/Bioblend expertise Programming: Python, Javascript, Lua, R, Development tools: GIT, Subversion, Emacs Database: NoSQL […]
Research Engineer
Emmanuel Quevillon
IT Infrastructure and Engineering for Science
Co-head of Data & Tools group Data management: Update & maintainance of biological data banks resources (BioMAJ) Database maintainance & developpement (PostgreSQL, MongoDB) Software developper, web applications Catalyst (Perl) Django (Python) Javascript (JQuery)