Timeline

Julien Guglielmini
Research Engineer
17 Jul 2023
course

Bioinformatics program for PhD students 2023 2024

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06 Feb 2023
team

Expertise group : PAGE – Protein And Gene Evolution

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08 Oct 2022
publication

Viral origin of eukaryotic type IIA DNA topoisomerases

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07 Sep 2022
project

Functional Analysis of novel centrosomal and basal body components of two human parasitic protozoa

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11 Jul 2022
course

Bioinformatics program for PhD students 2022-2023

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11 Jul 2022
software

BIGSdb-Pasteur

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06 Jul 2022
publication

First Description of a Yersinia pseudotuberculosis Clonal Outbreak in France, Confirmed Using a New Core Genome Multilocus Sequence Typing Method.

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14 Jun 2022
publication

A dual barcoding approach to bacterial strain nomenclature: Genomic taxonomy of Klebsiella pneumoniae strains

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30 Nov 2021
course

Introduction à la Phylogénie Moléculaire : Concepts, méthodes et interprétation

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15 Sep 2021
publication

Genomic epidemiology and strain taxonomy of Corynebacterium diphtheriae.

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01 Aug 2021
publication

Ongoing diphtheria outbreak in Yemen: a cross-sectional and genomic epidemiology study.

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14 Apr 2021
publication

Phylogenetic analysis of Harmonin homology domains.

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18 Feb 2021
publication

High-Resolution Typing of Staphylococcus epidermidis Based on Core Genome Multilocus Sequence Typing To Investigate the Hospital Spread of Multidrug-Resistant Clones.

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01 Jan 2021
publication

Phylogeny of the Varidnaviria Morphogenesis Module: Congruence and Incongruence With the Tree of Life and Viral Taxonomy.

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09 Oct 2020
publication

Diversity and evolution of B-family DNA polymerases

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24 Sep 2020
course

Bioinformatics program for PhD students 2020-2021

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12 Mar 2020
course

Introduction to Molecular Phylogenetics – ENS Paris

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28 Jan 2020
publication

Reply to Ku and Sun: Ancestors of modern giant and large eukaryotic dsDNA viruses infected proto-eukaryotes

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01 Jan 2020
publication

Novel genome sequences of cell-fusing agent virus allow comparison of virus phylogeny with the genetic structure of Aedes aegypti populations.

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09 Nov 2019
course

Introduction à la Phylogénie Moléculaire : Concepts, méthodes et interprétation

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03 Oct 2019
publication

Genus-wide Yersinia core-genome multilocus sequence typing for species identification and strain characterization

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10 Sep 2019
publication

Diversification of giant and large eukaryotic dsDNA viruses predated the origin of modern eukaryotes

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27 Aug 2019
publication

Role of a patatin-like phospholipase in Plasmodium falciparum gametogenesis and malaria transmission.

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08 Jul 2019
publication

Simulation data for the estimation of numerical constants for approximating pairwise evolutionary distances between amino acid sequences

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18 Jun 2019
project

Welcome to the Nanopore User Group at Institut Pasteur webpage

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04 Jun 2019
course

Introduction à la phylogénie moléculaire

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01 Apr 2019
publication

Genus-wide Leptospira core genome multilocus sequence typing for strain taxonomy and global surveillance.

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26 Jun 2018
course

C3BI Course: Introduction to Molecular Phylogenetics – Hong Kong 2018

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01 Jun 2018
publication

Genomic Sequencing of Bordetella pertussis for Epidemiology and Global Surveillance of Whooping Cough

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23 Oct 2017
course

INTRODUCTION À LA PHYLOGÉNIE MOLÉCULAIRE : CONCEPTS, METHODES ET OUTILS

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18 May 2017
publication

Proteome remodelling by the stress sigma factor RpoS/σS in Salmonella: identification of small proteins and evidence for post-transcriptional regulation.

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24 Jun 2016
project

Evolutionary relationships between giant viruses and eukaryotes

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06 Jun 2016
team

Mutualized Platform for Microbiology

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16 Mar 2016
publication

Identification of protein secretion systems in bacterial genomes

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29 Jan 2016
publication

Genome Analysis of Kingella kingae Strain KWG1 Reveals How a β-Lactamase Gene Inserted in the Chromosome of This Species

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08 Oct 2015
tool

TXSScan – models and profiles for protein secretion systems

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07 Sep 2015
project

ANR TransLeish – Discovery of druggable protein kinases in the protozoan parasite Leishmania donovani using hit compounds identified by phenotypic screening

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05 Sep 2015
tool

ConjDB – a database of conjugative & mobilization systems and T4SS

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05 Sep 2015
software

CONJscan-T4SSscan

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31 Aug 2015
project

Genomic taxonomy of bacterial strains: universal nomenclatures for epidemiology and population biology

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22 Jul 2015
project

Bioinformatics of genome sequencing applied to epidemiological surveillance of infectious agents

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26 Jun 2015
team

Bioinformatics and Biostatistics HUB

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11 May 2015
team

Microbial Evolutionary Genomics

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05 May 2015
publication

Eco-Evolutionary Dynamics of Episomes among Ecologically Cohesive Bacterial Populations

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05 May 2014
publication

A systematic and functional classification of Streptococcus pyogenes that serves as a new tool for molecular typing and vaccine development

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12 Mar 2014
publication

Key components of the eight classes of type IV secretion systems involved in bacterial conjugation or protein secretion

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07 Mar 2013
publication

Updated model of group A Streptococcus M proteins based on a comprehensive worldwide study

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13 Sep 2012
publication

Evolution of conjugation and type IV secretion systems

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01 Nov 2011
publication

Bacterial toxin-antitoxin systems: Translation inhibitors everywhere

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18 Aug 2011
publication

The repertoire of ICE in prokaryotes underscores the unity, diversity, and ubiquity of conjugation

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21 Mar 2011
publication

Diversity of bacterial type II toxin-antitoxin systems: a comprehensive search and functional analysis of novel families

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18 Jan 2011
publication

Evolutionary history of hepatitis C virus genotype 5a in France, a multicenter ANRS study

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06 Mar 2009
publication

Phylogenomics of unusual histone H2A Variants in Bdelloid rotifers

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02 Feb 2009
publication

The decay of the chromosomally encoded ccdO157 toxin-antitoxin system in the Escherichia coli species

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25 Jun 2008
publication

Automated discovery and phylogenetic analysis of new toxin-antitoxin systems

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