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2021Deep Impact of Random Amplification and Library Construction Methods on Viral Metagenomics Results., Viruses 2021 Feb; 13(2): .
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2020Absence of SARS-CoV-2 infection in cats and dogs in close contact with a cluster of COVID-19 patients in a veterinary campus., One Health 2020 Dec; 10(): 100164.
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2020A comparison of four serological assays for detecting anti-SARS-CoV-2 antibodies in human serum samples from different populations., Sci Transl Med 2020 09; 12(559): .
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2020Identification of Umbre Orthobunyavirus as a Novel Zoonotic Virus Responsible for Lethal Encephalitis in 2 French Patients with Hypogammaglobulinemia., Clin. Infect. Dis. 2020 Jun; (): .
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2020Viromics on Honey-Baited FTA Cards as a New Tool for the Detection of Circulating Viruses in Mosquitoes., Viruses 2020 Feb; 12(3): .
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2020RNA Viruses of Amblyomma variegatum and Rhipicephalus microplus and Cattle Susceptibility in the French Antilles., Viruses 2020 Jan; 12(2): .
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2019Whole genome sequencing and phylogenetic characterization of a novel bat-associated picornavirus-like virus with an unusual genome organization., Infect. Genet. Evol. 2020 03; 78(): 104130.
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2019Six Nearly Complete Genome Segments of a Novel Reovirus Identified in Laotian Batflies., Microbiol Resour Announc 2019 Nov; 8(46): .
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2019Insights into the Host Range, Genetic Diversity, and Geographical Distribution of Jingmenviruses., mSphere 2019 11; 4(6): .
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2019Monitoring Silent Spillovers Before Emergence: A Pilot Study at the Tick/Human Interface in Thailand., Front Microbiol 2019 ; 10(): 2315.
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2019Broad-Range Papillomavirus Transcriptome as a Biomarker of Papillomavirus-Associated Cervical High-Grade Cytology, J Mol Diagn 2019 Sep;21(5):768-781.
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2019No evidence for viral transcripts in dermatofibrosarcoma protuberans, Br. J. Dermatol. 2019 Sep;181(3):634-636.
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2019Adventitious Virus Detection in Cells by High-Throughput Sequencing of Newly Synthesized RNAs: Unambiguous Differentiation of Cell Infection from Carryover of Viral Nucleic Acids, mSphere 2019 06;4(3).
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2019Cutaneous granulomas with primary immunodeficiency in children: a report of 17 new patients and a review of the literature, J Eur Acad Dermatol Venereol 2019 Jul;33(7):1412-1420.
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2019Use of a new RNA next generation sequencing approach for the specific detection of virus infection in cells, Biologicals 2019 May;59:29-36.
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2019A Novel Polycipiviridae Virus Identified in Pteropus lylei Stools., Microbiol Resour Announc 2019 Apr; 8(15): .
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2019Outcomes for Nitazoxanide Treatment in a Case Series of Patients with Primary Immunodeficiencies and Rubella Virus-Associated Granuloma, J. Clin. Immunol. 2019 01;39(1):112-117.
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2019Metagenomic analysis identifies human adenovirus 31 in children with acute flaccid paralysis in Tunisia, Arch. Virol. 2019 Mar;164(3):747-755.
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2019Rubella Virus-Associated Cutaneous Granulomatous Disease: a Unique Complication in Immune-Deficient Patients, Not Limited to DNA Repair Disorders, J. Clin. Immunol. 2019 01;39(1):81-89.
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2019RVDB-prot, a reference viral protein database and its HMM profiles., F1000Res 2019 ; 8(): 530.
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2018Current Perspectives on High-Throughput Sequencing (HTS) for Adventitious Virus Detection: Upstream Sample Processing and Library Preparation, Viruses 2018 10;10(10).
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2018Hypoglycemic Toxins and Enteroviruses as Causes of Outbreaks of Acute Encephalitis-Like Syndrome in Children, Bac Giang Province, Northern Vietnam, Emerging Infect. Dis. 2018 08;24(8):1435-1443.
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2018Emergence of two Usutu virus lineages in Culex pipiens mosquitoes in the Camargue, France, 2015, Infect. Genet. Evol. 2018 07;61:151-154.
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2018Protocol for Generating Infectious RNA Viromes from Complex Biological Samples., Methods Mol. Biol. 2018 ; 1838(): 25-36.
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2017Experimental transfusion of variant CJD-infected blood reveals previously uncharacterised prion disorder in mice and macaque, Nat Commun 2017 11;8(1):1268.
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2017No Viral Transcripts Associated with Folliculotropic Mycosis Fungoides Using a High Throughput Sequencing Approach, Acta Derm. Venereol. 2017 Oct;97(9):1125-1126.
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2017Untargeted next-generation sequencing-based first-line diagnosis of infection in immunocompromised adults: a multicentre, blinded, prospective study., Clin Microbiol Infect 2017 Aug; 23(8): 574.e1-574.e6.
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2017Aetiology of acute meningoencephalitis in Cambodian children, 2010-2013., Emerg Microbes Infect 2017 May; 6(5): e35.
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2017Identification and prevalence of swine pasivirus 1 in eastern Romanian pig farms, J. Vet. Diagn. Invest. 2017 May;29(3):305-311.
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2017Astrovirus Diagnostics., Viruses 2017 01; 9(1): .
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2017Cutaneous and Visceral Chronic Granulomatous Disease Triggered by a Rubella Virus Vaccine Strain in Children With Primary Immunodeficiencies., Clin Infect Dis 2017 Jan; 64(1): 83-86.
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2016Molecular epidemiology of human enterovirus 71 at the origin of an epidemic of fatal hand, foot and mouth disease cases in Cambodia, Emerg Microbes Infect 2016 Sep;5(9):e104.
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2016Zoonotic viruses: how to monitor their emergence?, Virologie (Montrouge) 2016 Aug; 20(4): 231-244.
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2016Evidence of human infection by a new mammarenavirus endemic to Southeastern Asia, Elife 2016 06;5.
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2016Viral metagenomics applied to blood donors and recipients at high risk for blood-borne infections, Blood Transfus 2016 09;14(5):400-7.
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2016Characterization of Viral Communities of Biting Midges and Identification of Novel Thogotovirus Species and Rhabdovirus Genus, Viruses 2016 Mar;8(3):77.
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2016Diversity of viruses in Ixodes ricinus, and characterization of a neurotropic strain of Eyach virus, New Microbes New Infect 2016 May;11:71-81.
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2016Screening for Viral Pathogens in African Simian Bushmeat Seized at A French Airport, Transbound Emerg Dis 2017 Aug;64(4):1159-1167.
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2016Viral metagenomics: are we missing the giants?, Curr. Opin. Microbiol. 2016 06;31:34-43.
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2016Viral metagenomics and blood safety, Transfus Clin Biol 2016 Feb;23(1):28-38.
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2015Faustovirus-Like Asfarvirus in Hematophagous Biting Midges and Their Vertebrate Hosts, Front Microbiol 2015;6:1406.
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2015Host-Associated Metagenomics: A Guide to Generating Infectious RNA Viromes, PLoS ONE 2015;10(10):e0139810.
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2015Next-Generation Sequencing for Diagnosis and Tailored Therapy: A Case Report of Astrovirus-Associated Progressive Encephalitis., J Pediatric Infect Dis Soc 2015 Sep; 4(3): e53-7.
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2015A Comparison between Transcriptome Sequencing and 16S Metagenomics for Detection of Bacterial Pathogens in Wildlife, PLoS Negl Trop Dis 2015;9(8):e0003929.
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2015Chicken skin virome analyzed by high-throughput sequencing shows a composition highly different from human skin, Virus Genes 2015 Oct;51(2):209-16.
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2015Antibodies to VP1 of swine pasivirus in humans without evidence of transmission from a pig source, J. Clin. Virol. 2015 Aug;69:36-9.
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2015How a multidisciplinary ‘One Health’ approach can combat the tick-borne pathogen threat in Europe, Future Microbiol 2015;10(5):809-18.
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2015The potential of whole genome NGS for infectious disease diagnosis., Expert Rev Mol Diagn 2015 ; 15(12): 1517-9.
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2014First molecular detection of Rickettsia africae in ticks from the Union of the Comoros, Parasit Vectors 2014 Sep;7:444.
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2014Viral metagenomics on animals as a tool for the detection of zoonoses prior to human infection?, Int J Mol Sci 2014 Jun;15(6):10377-97.
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2013Describing the silent human virome with an emphasis on giant viruses, Intervirology 2013;56(6):395-412.
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2013Development of real-time RT-PCR for the detection of low concentrations of Rift Valley fever virus, J. Virol. Methods 2014 Jan;195:92-9.
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2012High prevalence of hepatitis E in humans and pigs and evidence of genotype-3 virus in swine, Madagascar, Am. J. Trop. Med. Hyg. 2013 Feb;88(2):329-38.
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2012Pathogenic Leptospira spp. in bats, Madagascar and Union of the Comoros, Emerging Infect. Dis. 2012 Oct;18(10):1696-8.
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2012Influenza A(H1N1)pdm09 virus in pigs, Réunion Island, Emerging Infect. Dis. 2012 Oct;18(10):1665-8.
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2012Intense co-circulation of non-influenza respiratory viruses during the first wave of pandemic influenza pH1N1/2009: a cohort study in Reunion Island, PLoS ONE 2012;7(9):e44755.
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2012Identification of novel paramyxoviruses in insectivorous bats of the Southwest Indian Ocean, Virus Res. 2012 Dec;170(1-2):159-63.
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2012Molecular evolutionary analysis of pH1N1 2009 influenza virus in Reunion Island, South West Indian Ocean region: a cohort study, PLoS ONE 2012;7(8):e43742.
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2012Adhesion of human pathogenic enteric viruses and surrogate viruses to inert and vegetal food surfaces., Food Microbiol. 2012 Oct; 32(1): 48-56.
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2011Pandemic influenza due to pH1N1/2009 virus: estimation of infection burden in Reunion Island through a prospective serosurvey, austral winter 2009, PLoS ONE 2011;6(9):e25738.
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2011Comparison of chlorine and peroxyacetic-based disinfectant to inactivate Feline calicivirus, Murine norovirus and Hepatitis A virus on lettuce, Int. J. Food Microbiol. 2011 Nov;151(1):98-104.
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2010A predictive microbiology approach for thermal inactivation of Hepatitis A virus in acidified berries., Food Microbiol. 2010 Oct; 27(7): 962-7.
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2009Massilia virus, a novel Phlebovirus (Bunyaviridae) isolated from sandflies in the Mediterranean, Vector Borne Zoonotic Dis. 2009 Oct;9(5):519-30.
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2009Development and validation of real-time one-step reverse transcription-PCR for the detection and typing of dengue viruses, J. Clin. Virol. 2009 May;45(1):61-6.
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2008Sandfly fever Sicilian virus, Algeria, Emerging Infect. Dis. 2008 May;14(5):795-7.
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2007Cocirculation of 2 genotypes of Toscana virus, southeastern France, Emerging Infect. Dis. 2007 Mar;13(3):465-8.
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2007A real-time RT-PCR method for the universal detection and identification of flaviviruses, Vector Borne Zoonotic Dis. 2007;7(4):467-77.
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2007Long PCR Product Sequencing (LoPPS): a shotgun-based approach to sequence long PCR products, Nat Protoc 2007;2(2):340-6.
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2007Alkhurma hemorrhagic fever virus in Ornithodoros savignyi ticks, Emerging Infect. Dis. 2007 Jan;13(1):153-5.
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2006Toscana virus RNA in Sergentomyia minuta files, Emerging Infect. Dis. 2006 Aug;12(8):1299-300.
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2006LoPPS: a long PCR product sequencing method for rapid characterisation of long amplicons, Biochem. Biophys. Res. Commun. 2006 Jun;344(4):1080-5.