• 2020
  Birnberg L, Temmam S, Aranda C, Correa-Fiz F, Talavera S, Bigot T, Eloit M, Busquets N, Viromics on Honey-Baited FTA Cards as a New Tool for the Detection of Circulating Viruses in Mosquitoes, Viruses 2020 Feb;12(3).
• 2020
  Gondard M, Temmam S, Devillers E, Pinarello V, Bigot T, Chrétien D, Aprelon R, Vayssier-Taussat M, Albina E, Eloit M, Moutailler S, RNA Viruses of and and Cattle Susceptibility in the French Antilles, Viruses 2020 Jan;12(2).
• 2019
  Temmam S, Hul V, Bigot T, Bessaud M, Chrétien D, Hoem T, Gorman C, Duong V, Dussart P, Cappelle J, Eloit M, Whole genome sequencing and phylogenetic characterization of a novel bat-associated picornavirus-like virus with an unusual genome organization, Infect. Genet. Evol. 2019 Nov;78:104130.
• 2019
  Temmam S, Vongphayloth K, Hertz JC, Sutherland I, Douangboubpha B, Grandadam M, Bigot T, Brey PT, Eloit M, Six Nearly Complete Genome Segments of a Novel Reovirus Identified in Laotian Batflies, Microbiol Resour Announc 2019 Nov;8(46).
• 2019
  Temmam S, Bigot T, Chrétien D, Gondard M, Pérot P, Pommelet V, Dufour E, Petres S, Devillers E, Hoem T, Pinarello V, Hul V, Vongphayloth K, Hertz JC, Loiseau I, Dumarest M, Duong V, Vayssier-Taussat M, Grandadam M, Albina E, Dussart P, Moutailler S, Cappelle J, Brey PT, Eloit M, Insights into the Host Range, Genetic Diversity, and Geographical Distribution of Jingmenviruses, mSphere 2019 11;4(6).
• 2019
  Temmam S, Chrétien D, Bigot T, Dufour E, Petres S, Desquesnes M, Devillers E, Dumarest M, Yousfi L, Jittapalapong S, Karnchanabanthoeng A, Chaisiri K, Gagnieur L, Cosson JF, Vayssier-Taussat M, Morand S, Moutailler S, Eloit M, Monitoring Silent Spillovers Before Emergence: A Pilot Study at the Tick/Human Interface in Thailand, Front Microbiol 2019;10:2315.
• 2019
  Pérot P, Biton A, Marchetta J, Pourcelot AG, Nazac A, Marret H, Hébert T, Chrétien D, Demazoin MC, Falguières M, Arowas L, Laude H, Heard I, Eloit M, Broad-Range Papillomavirus Transcriptome as a Biomarker of Papillomavirus-Associated Cervical High-Grade Cytology, J Mol Diagn 2019 Sep;21(5):768-781.
• 2019
  Du-Thanh A, Pérot P, Foulongne V, Dereure O, Guillot B, Eloit M, No evidence for viral transcripts in dermatofibrosarcoma protuberans, Br. J. Dermatol. 2019 Sep;181(3):634-636.
• 2019
  Cheval J, Muth E, Gonzalez G, Coulpier M, Beurdeley P, Cruveiller S, Eloit M, Adventitious Virus Detection in Cells by High-Throughput Sequencing of Newly Synthesized RNAs: Unambiguous Differentiation of Cell Infection from Carryover of Viral Nucleic Acids, mSphere 2019 06;4(3).
• 2019
  Leclerc-Mercier S, Moshous D, Neven B, Mahlaoui N, Martin L, Pellier I, Blanche S, Picard C, Fischer A, Perot P, Eloit M, Fraitag S, Bodemer C, Cutaneous granulomas with primary immunodeficiency in children: a report of 17 new patients and a review of the literature, J Eur Acad Dermatol Venereol 2019 Jul;33(7):1412-1420.
• 2019
  Brussel A, Brack K, Muth E, Zirwes R, Cheval J, Hebert C, Charpin JM, Marinaci A, Flan B, Ruppach H, Beurdeley P, Eloit M, Use of a new RNA next generation sequencing approach for the specific detection of virus infection in cells, Biologicals 2019 May;59:29-36.
• 2019
  Temmam S, Hul V, Bigot T, Hoem T, Gorman C, Duong V, Dussart P, Cappelle J, Eloit M, A Novel Virus Identified in Stools, Microbiol Resour Announc 2019 Apr;8(15).
• 2019
  Perelygina L, Buchbinder D, Dorsey MJ, Eloit M, Hauck F, Hautala T, Moshous D, Uriarte I, Deripapa E, Icenogle J, Sullivan KE, Outcomes for Nitazoxanide Treatment in a Case Series of Patients with Primary Immunodeficiencies and Rubella Virus-Associated Granuloma, J. Clin. Immunol. 2019 01;39(1):112-117.
• 2019
  Haddad-Boubaker S, Joffret ML, Pérot P, Bessaud M, Meddeb Z, Touzi H, Delpeyroux F, Triki H, Eloit M, Metagenomic analysis identifies human adenovirus 31 in children with acute flaccid paralysis in Tunisia, Arch. Virol. 2019 Mar;164(3):747-755.
• 2019
  Buchbinder D, Hauck F, Albert MH, Rack A, Bakhtiar S, Shcherbina A, Deripapa E, Sullivan KE, Perelygina L, Eloit M, Neven B, Pérot P, Moshous D, Suarez F, Bodemer C, Bonilla FA, Vaz LE, Krol AL, Klein C, Seppanen M, Nugent DJ, Singh J, Ochs HD, Rubella Virus-Associated Cutaneous Granulomatous Disease: a Unique Complication in Immune-Deficient Patients, Not Limited to DNA Repair Disorders, J. Clin. Immunol. 2019 01;39(1):81-89.
• 2018
  Ng SH, Braxton C, Eloit M, Feng SF, Fragnoud R, Mallet L, Mee ET, Sathiamoorthy S, Vandeputte O, Khan AS, Current Perspectives on High-Throughput Sequencing (HTS) for Adventitious Virus Detection: Upstream Sample Processing and Library Preparation, Viruses 2018 10;10(10).
• 2018
  Phan NT, Gouilh MA, Paireau J, Phuong L, Cheval J, Ngu ND, Hébert C, Nguyen TH, Lortholary O, Tondeur L, Manuguerra JC, Barouki R, Sander J, Janzen N, Nguyen HT, Brey PT, Fontanet A, Eloit M, Hypoglycemic Toxins and Enteroviruses as Causes of Outbreaks of Acute Encephalitis-Like Syndrome in Children, Bac Giang Province, Northern Vietnam, Emerging Infect. Dis. 2018 08;24(8):1435-1443.
• 2018
  Eiden M, Gil P, Ziegler U, Rakotoarivony I, Marie A, Frances B, L'Ambert G, Simonin Y, Foulongne V, Groschup MH, Gutierrez S, Eloit M, Emergence of two Usutu virus lineages in Culex pipiens mosquitoes in the Camargue, France, 2015, Infect. Genet. Evol. 2018 07;61:151-154.
• 2018
  Monteil-Bouchard S, Temmam S, Desnues C, Protocol for Generating Infectious RNA Viromes from Complex Biological Samples, Methods Mol. Biol. 2018;1838:25-36.
• 2017
  Comoy EE, Mikol J, Jaffré N, Lebon V, Levavasseur E, Streichenberger N, Sumian C, Perret-Liaudet A, Eloit M, Andreoletti O, Haïk S, Hantraye P, Deslys JP, Experimental transfusion of variant CJD-infected blood reveals previously uncharacterised prion disorder in mice and macaque, Nat Commun 2017 11;8(1):1268.
• 2017
  Du-Thanh A, Dereure O, Cheval J, Dumarest M, Al-Shikhley L, Girard C, Guillot B, Eloit M, No Viral Transcripts Associated with Folliculotropic Mycosis Fungoides Using a High Throughput Sequencing Approach, Acta Derm. Venereol. 2017 Oct;97(9):1125-1126.
• 2017
  Horwood PF, Duong V, Laurent D, Mey C, Sothy H, Santy K, Richner B, Heng S, Hem S, Cheval J, Gorman C, Dussart P, de Jong MD, Kerleguer A, Guillard B, Murgue B, Lecuit M, de Lamballerie X, Farrar JJ, Tarantola A, Eloit M, Buchy P, Aetiology of acute meningoencephalitis in Cambodian children, 2010-2013, Emerg Microbes Infect 2017 May;6(5):e35.
• 2017
  Zaulet M, Petrovan V, Birladeanu AM, Stoian AMM, Kevorkian SEM, Nichita C, Eloit M, Buburuzan L, Identification and prevalence of swine pasivirus 1 in eastern Romanian pig farms, J. Vet. Diagn. Invest. 2017 May;29(3):305-311.
• 2017
  Parize P, Muth E, Richaud C, Gratigny M, Pilmis B, Lamamy A, Mainardi JL, Cheval J, de Visser L, Jagorel F, Ben Yahia L, Bamba G, Dubois M, Join-Lambert O, Leruez-Ville M, Nassif X, Lefort A, Lanternier F, Suarez F, Lortholary O, Lecuit M, Eloit M, Untargeted next-generation sequencing-based first-line diagnosis of infection in immunocompromised adults: a multicentre, blinded, prospective study, Clin. Microbiol. Infect. 2017 Aug;23(8):574.e1-574.e6.
• 2017
  Pérot P, Lecuit M, Eloit M, Astrovirus Diagnostics, Viruses 2017 01;9(1).
• 2016
  Neven B, Pérot P, Bruneau J, Pasquet M, Ramirez M, Diana JS, Luzi S, Corre-Catelin N, Chardot C, Moshous D, Leclerc Mercier S, Mahlaoui N, Aladjidi N, Le Bail B, Lecuit M, Bodemer C, Molina TJ, Blanche S, Eloit M, Cutaneous and Visceral Chronic Granulomatous Disease Triggered by a Rubella Virus Vaccine Strain in Children With Primary Immunodeficiencies, Clin. Infect. Dis. 2017 Jan;64(1):83-86.
• 2016
  Duong V, Mey C, Eloit M, Zhu H, Danet L, Huang Z, Zou G, Tarantola A, Cheval J, Perot P, Laurent D, Richner B, Ky S, Heng S, Touch S, Sovann L, van Doorn R, Tan Tran T, Farrar JJ, Wentworth DE, Das SR, Stockwell TB, Manuguerra JC, Delpeyroux F, Guan Y, Altmeyer R, Buchy P, Molecular epidemiology of human enterovirus 71 at the origin of an epidemic of fatal hand, foot and mouth disease cases in Cambodia, Emerg Microbes Infect 2016 Sep;5(9):e104.
• 2016
  Blasdell KR, Duong V, Eloit M, Chretien F, Ly S, Hul V, Deubel V, Morand S, Buchy P, Evidence of human infection by a new mammarenavirus endemic to Southeastern Asia, Elife 2016 06;5.
• 2016
  Sauvage V, Laperche S, Cheval J, Muth E, Dubois M, Boizeau L, Hébert C, Lionnet F, Lefrère JJ, Eloit M, Viral metagenomics applied to blood donors and recipients at high risk for blood-borne infections, Blood Transfus 2016 09;14(5):400-7.
• 2016
  Temmam S, Monteil-Bouchard S, Robert C, Baudoin JP, Sambou M, Aubadie-Ladrix M, Labas N, Raoult D, Mediannikov O, Desnues C, Characterization of Viral Communities of Biting Midges and Identification of Novel Thogotovirus Species and Rhabdovirus Genus, Viruses 2016 Mar;8(3):77.
• 2016
  Moutailler S, Popovici I, Devillers E, Vayssier-Taussat M, Eloit M, Diversity of viruses in Ixodes ricinus, and characterization of a neurotropic strain of Eyach virus, New Microbes New Infect 2016 May;11:71-81.
• 2016
  Temmam S, Davoust B, Chaber AL, Lignereux Y, Michelle C, Monteil-Bouchard S, Raoult D, Desnues C, Screening for Viral Pathogens in African Simian Bushmeat Seized at A French Airport, Transbound Emerg Dis 2017 Aug;64(4):1159-1167.
• 2016
  Halary S, Temmam S, Raoult D, Desnues C, Viral metagenomics: are we missing the giants?, Curr. Opin. Microbiol. 2016 06;31:34-43.
• 2016
  Sauvage V, Eloit M, Viral metagenomics and blood safety, Transfus Clin Biol 2016 Feb;23(1):28-38.
• 2015
  Temmam S, Monteil-Bouchard S, Sambou M, Aubadie-Ladrix M, Azza S, Decloquement P, Khalil JY, Baudoin JP, Jardot P, Robert C, La Scola B, Mediannikov OY, Raoult D, Desnues C, Faustovirus-Like Asfarvirus in Hematophagous Biting Midges and Their Vertebrate Hosts, Front Microbiol 2015;6:1406.
• 2015
  Lecuit M, Eloit M, The potential of whole genome NGS for infectious disease diagnosis, Expert Rev. Mol. Diagn. 2015;15(12):1517-9.
• 2015
  Temmam S, Monteil-Bouchard S, Robert C, Pascalis H, Michelle C, Jardot P, Charrel R, Raoult D, Desnues C, Host-Associated Metagenomics: A Guide to Generating Infectious RNA Viromes, PLoS ONE 2015;10(10):e0139810.
• 2015
  Razzauti M, Galan M, Bernard M, Maman S, Klopp C, Charbonnel N, Vayssier-Taussat M, Eloit M, Cosson JF, A Comparison between Transcriptome Sequencing and 16S Metagenomics for Detection of Bacterial Pathogens in Wildlife, PLoS Negl Trop Dis 2015;9(8):e0003929.
• 2015
  Denesvre C, Dumarest M, Rémy S, Gourichon D, Eloit M, Chicken skin virome analyzed by high-throughput sequencing shows a composition highly different from human skin, Virus Genes 2015 Oct;51(2):209-16.
• 2015
  Frémond ML, Pérot P, Muth E, Cros G, Dumarest M, Mahlaoui N, Seilhean D, Desguerre I, Hébert C, Corre-Catelin N, Neven B, Lecuit M, Blanche S, Picard C, Eloit M, Next-Generation Sequencing for Diagnosis and Tailored Therapy: A Case Report of Astrovirus-Associated Progressive Encephalitis, J Pediatric Infect Dis Soc 2015 Sep;4(3):e53-7.
• 2015
  Arnold F, Hober D, Chaussade H, Dumarest M, Sané F, Nowakowsjki M, Rigaud E, Bellalou J, Desailloud R, Coursaget P, Eloit M, Antibodies to VP1 of swine pasivirus in humans without evidence of transmission from a pig source, J. Clin. Virol. 2015 Aug;69:36-9.
• 2015
  Vayssier-Taussat M, Cosson JF, Degeilh B, Eloit M, Fontanet A, Moutailler S, Raoult D, Sellal E, Ungeheuer MN, Zylbermann P, How a multidisciplinary ‘One Health’ approach can combat the tick-borne pathogen threat in Europe, Future Microbiol 2015;10(5):809-18.
• 2014
  Yssouf A, Socolovschi C, Kernif T, Temmam S, Lagadec E, Tortosa P, Parola P, First molecular detection of Rickettsia africae in ticks from the Union of the Comoros, Parasit Vectors 2014 Sep;7:444.
• 2014
  Temmam S, Davoust B, Berenger JM, Raoult D, Desnues C, Viral metagenomics on animals as a tool for the detection of zoonoses prior to human infection?, Int J Mol Sci 2014 Jun;15(6):10377-97.
• 2013
  Popgeorgiev N, Temmam S, Raoult D, Desnues C, Describing the silent human virome with an emphasis on giant viruses, Intervirology 2013;56(6):395-412.
• 2013
  Maquart M, Temmam S, Héraud JM, Leparc-Goffart I, Cêtre-Sossah C, Dellagi K, Cardinale E, Pascalis H, Development of real-time RT-PCR for the detection of low concentrations of Rift Valley fever virus, J. Virol. Methods 2014 Jan;195:92-9.
• 2012
  Temmam S, Besnard L, Andriamandimby SF, Foray C, Rasamoelina-Andriamanivo H, Héraud JM, Cardinale E, Dellagi K, Pavio N, Pascalis H, Porphyre V, High prevalence of hepatitis E in humans and pigs and evidence of genotype-3 virus in swine, Madagascar, Am. J. Trop. Med. Hyg. 2013 Feb;88(2):329-38.
• 2012
  Lagadec E, Gomard Y, Guernier V, Dietrich M, Pascalis H, Temmam S, Ramasindrazana B, Goodman SM, Tortosa P, Dellagi K, Pathogenic Leptospira spp. in bats, Madagascar and Union of the Comoros, Emerging Infect. Dis. 2012 Oct;18(10):1696-8.
• 2012
  Cardinale E, Pascalis H, Temmam S, Hervé S, Saulnier A, Turpin M, Barbier N, Hoarau J, Quéguiner S, Gorin S, Foray C, Roger M, Porphyre V, André P, Thomas T, de Lamballerie X, Dellagi K, Simon G, Influenza A(H1N1)pdm09 virus in pigs, Réunion Island, Emerging Infect. Dis. 2012 Oct;18(10):1665-8.
• 2012
  Pascalis H, Temmam S, Turpin M, Rollot O, Flahault A, Carrat F, de Lamballerie X, Gérardin P, Dellagi K, Intense co-circulation of non-influenza respiratory viruses during the first wave of pandemic influenza pH1N1/2009: a cohort study in Reunion Island, PLoS ONE 2012;7(9):e44755.
• 2012
  Wilkinson DA, Temmam S, Lebarbenchon C, Lagadec E, Chotte J, Guillebaud J, Ramasindrazana B, Héraud JM, de Lamballerie X, Goodman SM, Dellagi K, Pascalis H, Identification of novel paramyxoviruses in insectivorous bats of the Southwest Indian Ocean, Virus Res. 2012 Dec;170(1-2):159-63.
• 2012
  Pascalis H, Temmam S, Wilkinson DA, Dsouli N, Turpin M, de Lamballerie X, Dellagi K, Molecular evolutionary analysis of pH1N1 2009 influenza virus in Reunion Island, South West Indian Ocean region: a cohort study, PLoS ONE 2012;7(8):e43742.
• 2012
  Deboosere N, Pinon A, Caudrelier Y, Delobel A, Merle G, Perelle S, Temmam S, Loutreul J, Morin T, Estienney M, Belliot G, Pothier P, Gantzer C, Vialette M, Adhesion of human pathogenic enteric viruses and surrogate viruses to inert and vegetal food surfaces, Food Microbiol. 2012 Oct;32(1):48-56.
• 2011
  Dellagi K, Rollot O, Temmam S, Salez N, Guernier V, Pascalis H, Gérardin P, Fianu A, Lapidus N, Naty N, Tortosa P, Boussaïd K, Jaffar-Banjee MC, Filleul L, Flahault A, Carrat F, Favier F, de Lamballerie X, Pandemic influenza due to pH1N1/2009 virus: estimation of infection burden in Reunion Island through a prospective serosurvey, austral winter 2009, PLoS ONE 2011;6(9):e25738.
• 2011
  Fraisse A, Temmam S, Deboosere N, Guillier L, Delobel A, Maris P, Vialette M, Morin T, Perelle S, Comparison of chlorine and peroxyacetic-based disinfectant to inactivate Feline calicivirus, Murine norovirus and Hepatitis A virus on lettuce, Int. J. Food Microbiol. 2011 Nov;151(1):98-104.
• 2010
  Deboosere N, Pinon A, Delobel A, Temmam S, Morin T, Merle G, Blaise-Boisseau S, Perelle S, Vialette M, A predictive microbiology approach for thermal inactivation of Hepatitis A virus in acidified berries, Food Microbiol. 2010 Oct;27(7):962-7.
• 2009
  Charrel RN, Moureau G, Temmam S, Izri A, Marty P, Parola P, da Rosa AT, Tesh RB, de Lamballerie X, Massilia virus, a novel Phlebovirus (Bunyaviridae) isolated from sandflies in the Mediterranean, Vector Borne Zoonotic Dis. 2009 Oct;9(5):519-30.
• 2009
  Leparc-Goffart I, Baragatti M, Temmam S, Tuiskunen A, Moureau G, Charrel R, de Lamballerie X, Development and validation of real-time one-step reverse transcription-PCR for the detection and typing of dengue viruses, J. Clin. Virol. 2009 May;45(1):61-6.
• 2008
  Izri A, Temmam S, Moureau G, Hamrioui B, de Lamballerie X, Charrel RN, Sandfly fever Sicilian virus, Algeria, Emerging Infect. Dis. 2008 May;14(5):795-7.
• 2007
  Charrel RN, Izri A, Temmam S, Delaunay P, Toga I, Dumon H, Marty P, de Lamballerie X, Parola P, Cocirculation of 2 genotypes of Toscana virus, southeastern France, Emerging Infect. Dis. 2007 Mar;13(3):465-8.
• 2007
  Moureau G, Temmam S, Gonzalez JP, Charrel RN, Grard G, de Lamballerie X, A real-time RT-PCR method for the universal detection and identification of flaviviruses, Vector Borne Zoonotic Dis. 2007;7(4):467-77.
• 2007
  Emonet SF, Grard G, Brisbarre NM, Moureau GN, Temmam S, Charrel RN, de Lamballerie X, Long PCR Product Sequencing (LoPPS): a shotgun-based approach to sequence long PCR products, Nat Protoc 2007;2(2):340-6.
• 2007
  Charrel RN, Fagbo S, Moureau G, Alqahtani MH, Temmam S, de Lamballerie X, Alkhurma hemorrhagic fever virus in Ornithodoros savignyi ticks, Emerging Infect. Dis. 2007 Jan;13(1):153-5.
• 2006
  Charrel RN, Izri A, Temmam S, de Lamballerie X, Parola P, Toscana virus RNA in Sergentomyia minuta files, Emerging Infect. Dis. 2006 Aug;12(8):1299-300.
• 2006
  Emonet S, Grard G, Brisbarre N, Moureau G, Temmam S, Charrel R, de Lamballerie X, LoPPS: a long PCR product sequencing method for rapid characterisation of long amplicons, Biochem. Biophys. Res. Commun. 2006 Jun;344(4):1080-5.