Ligne de temps
Sylvain Brisse
Responsable de Structure
01 Jan 2021
publication
Incidence and severity of pertussis hospitalisations in infants aged less than 1 year in 37 hospitals of six EU/EEA countries, results of PERTINENT sentinel pilot surveillance system, December 2015 to December 2018.
Lire plus16 Dec 2020
publication
High resolution typing of Staphylococcus epidermidis based on cgMLST to investigate the hospital spread of multidrug resistant clones.
Lire plus27 Nov 2020
publication
Population genomics and antimicrobial resistance in Corynebacterium diphtheriae.
Lire plus01 Nov 2020
publication
Elizabethkingia anophelis meningitis in a traveler returning from the Americas.
Lire plus23 Oct 2020
publication
Corynebacterium diphtheriae Infection in Mahajanga, Madagascar: First Case Report.
Lire plus02 Sep 2020
publication
Klebsiella pneumoniae carriage in low-income countries: antimicrobial resistance, genomic diversity and risk factors.
Lire plus13 Aug 2020
publication
Genomic background of the Klebsiella pneumoniae NDM-1 outbreak in Poland, 2012-18.
Lire plus01 Aug 2020
publication
Community-acquired infection caused by the uncommon hypervirulent Klebsiella pneumoniae ST66-K2 lineage.
Lire plus01 Aug 2020
publication
Low Detection Rate of Bordetella pertussis Using the BioFire FilmArray Respiratory Panel 2plus.
Lire plus31 Jul 2020
03 Jul 2020
publication
Cutaneous ulcers revealing diphtheria: A re-emerging disease imported from Indian Ocean countries?
Lire plus01 Jul 2020
publication
Characterization of Klebsiella pneumoniae isolates from a mother-child cohort in Madagascar.
Lire plus29 Jun 2020
18 May 2020
28 Feb 2020
publication
Corynebacterium rouxii sp. nov., a novel member of the diphtheriae species complex
Lire plus31 Jan 2020
publication
The ZKIR Assay, a Real-Time PCR Method for the Detection of Klebsiella pneumoniae and Closely Related Species in Environmental Samples.
Lire plus31 Jan 2020
publication
Core/Whole Genome Multilocus Sequence Typing and Core Genome SNP-Based Typing of OXA-48-Producing Klebsiella pneumoniae Clinical Isolates From Spain.
Lire plus27 Jan 2020
event
“Doing things differently: the evolution of Bordetella pertussis” Genomes and Genetics with Global Health Departments seminar
Lire plus26 Jan 2020
publication
Determining Factors for Pertussis Vaccination Policy: A Study in Five EU Countries
Lire plus29 Oct 2019
publication
Gene composition as a potential barrier to large recombinations in the bacterial pathogen Klebsiella pneumoniae
Lire plus25 Oct 2019
publication
Description of Klebsiella spallanzanii sp. nov. and of Klebsiella pasteurii sp. nov.
Lire plus05 Oct 2019
publication
Erratum to “Description of Klebsiella africanensis sp. nov., Klebsiella variicola subsp. tropicalensis subsp. nov. and Klebsiella variicola subsp. variicola subsp. nov.” [Res Microbiol 170 (3) (2019) 165-170]
Lire plus03 Oct 2019
publication
Genus-wide Yersinia core-genome multilocus sequence typing for species identification and strain characterization
Lire plus03 Sep 2019
01 Sep 2019
06 Aug 2019
publication
Author Correction: Hypervirulent Listeria monocytogenes clones’ adaptation to mammalian gut accounts for their association with dairy products.
Lire plus01 Aug 2019
01 Jul 2019
publication
An MLST approach to support tracking of plasmids carrying OXA-48-like carbapenemase.
Lire plus30 Jun 2019
publication
Detection of OXA-48-like-producing Enterobacterales in Irish recreational water
Lire plus21 Jun 2019
18 Jun 2019
07 Jun 2019
06 Jun 2019
publication
Hypervirulent Listeria monocytogenes clones’ adaption to mammalian gut accounts for their association with dairy products.
Lire plus03 May 2019
publication
New Bacteriophages against Emerging Lineages ST23 and ST258 of Klebsiella pneumoniae and Efficacy Assessment in Galleria mellonella Larvae.
Lire plus03 May 2019
publication
Comparative Analysis of the Two Acinetobacter baumannii Multilocus Sequence Typing (MLST) Schemes.
Lire plus26 Apr 2019
publication
Genus-wide Leptospira core genome multilocus sequence typing for strain taxonomy and global surveillance
Lire plus03 Apr 2019
07 Mar 2019
publication
Bordetella parapertussis Bacteremia: Clinical Expression and Bacterial Genomics.
Lire plus25 Feb 2019
publication
Description of Klebsiella africanensis sp. nov., Klebsiella variicola subsp. tropicalensis subsp. nov. and Klebsiella variicola subsp. variicola subsp. nov
Lire plus18 Feb 2019
publication
LiSEQ – whole-genome sequencing of a cross-sectional survey of Listeria monocytogenes in ready-to-eat foods and human clinical cases in Europe
Lire plus25 Jan 2019
project
KlebNet: a One Health network bridging science and surveillance on antimicrobial resistant Klebsiella
Lire plus20 Jan 2019
publication
Whole genome sequencing reveals resemblance between ESBL-producing and carbapenem resistant Klebsiella pneumoniae isolates from Austrian rivers and clinical isolates from hospitals
Lire plus21 Dec 2018
07 Dec 2018
publication
Identification of Klebsiella pneumoniae, Klebsiella quasipneumoniae, Klebsiella variicola and Related Phylogroups by MALDI-TOF Mass Spectrometry.
Lire plus29 Oct 2018
publication
Tracking key virulence loci encoding aerobactin and salmochelin siderophore synthesis in Klebsiella pneumoniae
Lire plus22 Aug 2018
course
Bacterial strain nomenclatures applied to international epidemiological surveillance: A Theoretical and Hands-on Course
Lire plus09 Aug 2018
13 Jul 2018
publication
Population genomics of hypervirulent Klebsiella pneumoniae clonal-group 23 reveals early emergence and rapid global dissemination
Lire plus09 Jul 2018
publication
Genetic diversity, mobilisation and spread of the yersiniabactin-encoding mobile element ICEKp in Klebsiella pneumoniae populations
Lire plus01 Jun 2018
publication
Genomic Sequencing of Bordetella pertussis for Epidemiology and Global Surveillance of Whooping Cough
Lire plus24 Apr 2018
publication
Outbreak of Invasive Wound Mucormycosis in a Burn Unit Due to Multiple Strains of Mucor circinelloides f. circinelloides Resolved by Whole-Genome Sequencing.
Lire plus30 Jan 2018
publication
Rhinoscleroma pathogenesis: The type K3 capsule of Klebsiella rhinoscleromatis is a virulence factor not involved in Mikulicz cells formation
Lire plus01 Jan 2018
publication
Revisiting the taxonomy of the genus Elizabethkingia using whole-genome sequencing, optical mapping, and MALDI-TOF, along with proposal of three novel Elizabethkingia species: Elizabethkingia bruuniana sp. nov., Elizabethkingia ursingii sp. nov., and Elizabethkingia occulta sp. nov.
Lire plus20 Dec 2017
project
MedVetKlebs: Klebsiella pneumoniae from ecology to source attribution and transmission control
Lire plus05 Dec 2017
15 Nov 2017
project
SPARK: Transmission of multidrug resistant Klebsiella clones and genes – a One Health approach
Lire plus15 Nov 2017
publication
Molecular and epidemiological characterization of carbapenemase-producing Enterobacteriaceae in Norway, 2007 to 2014
Lire plus13 Nov 2017
publication
Genomic analysis of endemic clones of toxigenic and non-toxigenic Corynebacterium diphtheriae in Belarus during and after the major epidemic in 1990s
Lire plus02 Oct 2017
publication
Metagenomic assessment of the interplay between the environment and the genetic diversification of Acinetobacter
Lire plus01 Sep 2017
publication
Psychrobacter pasteurii and Psychrobacter piechaudii sp. nov., two novel species within the genus Psychrobacter.
Lire plus23 Aug 2017
27 Jul 2017
publication
In-vivo loss of carbapenem resistance by extensively drug-resistant Klebsiella pneumoniae during treatment via porin expression modification
Lire plus11 Jul 2017
publication
Comparative genomic analysis of Acinetobacter strains isolated from murine colonic crypts
Lire plus04 Jul 2017
24 May 2017
news
Emerging diseases: a highly mutant strain of the Elizabethkingia bacterium caused an outbreak in Wisconsin
Lire plus24 May 2017
publication
Evolutionary dynamics and genomic features of the Elizabethkingia anophelis 2015 to 2016 Wisconsin outbreak strain.
Lire plus26 Apr 2017
publication
Diversity, virulence, and antimicrobial resistance of the KPC-producing Klebsiella pneumoniae ST307 clone
Lire plus03 Mar 2017
publication
Metabolic diversity of the emerging pathogenic lineages of Klebsiella pneumoniae
Lire plus09 Jan 2017
publication
Diagnosis in France of a Non-Toxigenic tox Gene-Bearing Strain of Corynebacterium diphtheriae in a Young Male Back From Senegal.
Lire plus01 Jan 2017
07 Dec 2016
publication
Community-acquired meningitis caused by a CG86 hypervirulent Klebsiella pneumoniae strain: first case report in the Caribbean
Lire plus19 Nov 2016
19 Oct 2016
publication
Molecular Epidemiology of Colonizing and Infecting Isolates of Klebsiella pneumoniae
Lire plus10 Oct 2016
news
A population biology study of Listeria ushers in a new era in listeriosis surveillance
Lire plus03 Oct 2016
publication
Erratum: Global phylogeography and evolutionary history of Shigella dysenteriae type 1
Lire plus27 Jul 2016
publication
Genomic epidemiology and global diversity of the emerging bacterial pathogen Elizabethkingia anophelis
Lire plus12 May 2016
12 May 2016
01 Mar 2016
publication
Liver Abscess Caused by Infection with Community-Acquired Klebsiella quasipneumoniae subsp. quasipneumoniae
Lire plus01 Mar 2016
publication
Uncovering Listeria monocytogenes hypervirulence by harnessing its biodiversity.
Lire plus17 Feb 2016
publication
Genome-wide mosaicism within Mycobacterium abscessus: evolutionary and epidemiological implications
Lire plus01 Feb 2016
news
Listeria: identification of hypervirulent strains with placental and cerebral tropism
Lire plus26 Nov 2015
publication
Emergence of Antimicrobial-Resistant Escherichia coli of Animal Origin Spreading in Humans
Lire plus15 Oct 2015
publication
Whole genome sequencing to investigate an outbreak of mucormycosis in a burn unit
Lire plus05 Oct 2015
01 Oct 2015
publication
Clonogrouping, a Rapid Multiplex PCR Method for Identification of Major Clones of Listeria monocytogenes.
Lire plus08 Sep 2015
01 Sep 2015
01 Sep 2015
31 Aug 2015
project
Genomic taxonomy of bacterial strains: universal nomenclatures for epidemiology and population biology
Lire plus31 Aug 2015
publication
Épidémie de mucormycose dans un centre de traitement des brûlés : des biomarqueurs diagnostiques au séquençage complets des souches
Lire plus27 Aug 2015
publication
Phylogenetic lineages, clones and β-lactamases in an international collection of Klebsiella oxytoca isolates non-susceptible to expanded-spectrum cephalosporins
Lire plus27 Jul 2015
27 Jul 2015
22 Jul 2015
project
Bioinformatics of genome sequencing applied to epidemiological surveillance of infectious agents
Lire plus01 Jul 2015
publication
Tracking Nosocomial Klebsiella pneumoniae Infections and Outbreaks by Whole-Genome Analysis: Small-Scale Italian Scenario within a Single Hospital
Lire plus22 Jun 2015
publication
Genomic analysis of diversity, population structure, virulence, and antimicrobial resistance in Klebsiella pneumoniae, an urgent threat to public health
Lire plus11 May 2015
01 May 2015
publication
Multilocus sequence analysis of the genus Citrobacter and description of Citrobacter pasteurii sp. nov.
Lire plus09 Mar 2015
publication
In silico analysis of usher encoding genes in Klebsiella pneumoniae and characterization of their role in adhesion and colonization
Lire plus28 Jan 2015
publication
Association of tellurite resistance with hypervirulent clonal groups of Klebsiella pneumoniae
Lire plus06 Jan 2015
publication
Acinetobacter seifertii sp. nov., a member of the Acinetobacter calcoaceticus-Acinetobacter baumannii complex isolated from human clinical specimens
Lire plus29 Dec 2014
publication
Exploring the diversity of Listeria monocytogenes biofilm architecture by high-throughput confocal laser scanning microscopy and the predominance of the honeycomb-like morphotype
Lire plus17 Dec 2014
publication
Molecular epidemiology of carbapenem non-susceptible Acinetobacter baumannii in France
Lire plus26 Nov 2014
publication
Klebsiella variicola is a frequent cause of bloodstream infection in the stockholm area, and associated with higher mortality compared to K. pneumoniae
Lire plus10 Nov 2014
publication
Resequencing microarray technology for genotyping human papillomavirus in cervical smears
Lire plus01 Nov 2014
publication
Genomic definition of hypervirulent and multidrug-resistant Klebsiella pneumoniae clonal groups
Lire plus01 Oct 2014
publication
Multiplex PCR for detection of seven virulence factors and K1/K2 capsular serotypes of Klebsiella pneumoniae
Lire plus26 Sep 2014
publication
Development of a multiplex PCR assay for identification of Klebsiella pneumoniae hypervirulent clones of capsular serotype K2
Lire plus23 Sep 2014
publication
Leptospira mayottensis sp. nov., a pathogenic species of the genus Leptospira isolated from humans
Lire plus04 Sep 2014
publication
Differential contribution of AcrAB and OqxAB efflux pumps to multidrug resistance and virulence in Klebsiella pneumoniae
Lire plus09 Jul 2014
publication
Characterization of Listeria monocytogenes strains isolated during 2011-2013 from human infections in Switzerland
Lire plus23 Jun 2014
publication
Description of Klebsiella quasipneumoniae sp. nov., isolated from human infections, with two subspecies, Klebsiella quasipneumoniae subsp. quasipneumoniae subsp. nov. and Klebsiella quasipneumoniae subsp. similipneumoniae subsp. nov., and demonstration that Klebsiella singaporensis is a junior heterotypic synonym of Klebsiella variicola
Lire plus13 May 2014
publication
AlienTrimmer removes adapter oligonucleotides with high sensitivity in short-insert paired-end reads. Commentary on Turner (2014) Assessment of insert sizes and adapter content in FASTQ data from NexteraXT libraries
Lire plus21 Apr 2014
publication
Complete nucleotide sequence of two multidrug-resistant IncR plasmids from Klebsiella pneumoniae
Lire plus01 Apr 2014
publication
Patterns of selection on Plasmodium falciparum erythrocyte-binding antigens after the colonization of the New World
Lire plus25 Mar 2014
publication
Comparison of widely used Listeria monocytogenes strains EGD, 10403S, and EGD-e highlights genomic variations underlying differences in pathogenicity
Lire plus14 Mar 2014
publication
Carbapenem-resistant Klebsiella pneumoniae exhibit variability in capsular polysaccharide and capsule associated virulence traits
Lire plus13 Mar 2014
publication
Draft Genome Sequence of Campylobacter coli Strain IPSID-1 Isolated from a Patient with Immunoproliferative Small Intestinal Disease.
Lire plus20 Feb 2014
publication
Campylobacter coli cultured from the stools of a patient with immunoproliferative small intestinal disease
Lire plus31 Jan 2014
publication
Microbial molecular markers and epidemiological surveillance in the era of high throughput sequencing: an update from the IMMEM-10 conference
Lire plus31 Dec 2013
02 Oct 2013
publication
wzi Gene sequencing, a rapid method for determination of capsular type for Klebsiella strains
Lire plus04 Sep 2013
publication
Different factors associated with CTX-M-producing ST131 and non-ST131 Escherichia coli clinical isolates
Lire plus01 Aug 2013
publication
AlienTrimmer: a tool to quickly and accurately trim off multiple short contaminant sequences from high-throughput sequencing reads
Lire plus24 Jul 2013
publication
Deciphering bartonella diversity, recombination, and host specificity in a rodent community
Lire plus19 Jul 2013
publication
Lactobacillus paracasei comparative genomics: towards species pan-genome definition and exploitation of diversity
Lire plus18 Apr 2013
publication
Neutral genomic microevolution of a recently emerged pathogen, Salmonella enterica serovar Agona
Lire plus10 Apr 2013
publication
Characterization of an extended-spectrum class A β-lactamase from a novel enterobacterial species taxonomically related to Rahnella spp./Ewingella spp
Lire plus01 Apr 2013
publication
A novel murine model of rhinoscleroma identifies Mikulicz cells, the disease signature, as IL-10 dependent derivatives of inflammatory monocytes
Lire plus29 Jan 2013
publication
Development of variable number of tandem repeats typing schemes for Ralstonia solanacearum, the agent of bacterial wilt, banana Moko disease and potato brown rot
Lire plus24 Jan 2013
publication
From molecular to genomic epidemiology: transforming surveillance and control of infectious diseases
Lire plus06 Jan 2013
publication
Genomic analysis of smooth tubercle bacilli provides insights into ancestry and pathoadaptation of Mycobacterium tuberculosis
Lire plus22 Oct 2012
publication
Complete nucleotide sequence of the first KPC-2- and SHV-12-encoding IncX plasmid, pKpS90, from Klebsiella pneumoniae
Lire plus05 Oct 2012
publication
Population genetic structure of 4,12:a:- Salmonella enterica strains from harbor porpoises
Lire plus04 Oct 2012
publication
The emergence of multidrug-resistant Klebsiella pneumoniae of international clones ST13, ST16, ST35, ST48 and ST101 in a teaching hospital in the Paris region
Lire plus25 Sep 2012
publication
Microbiological and clinical characteristics of bacteraemia caused by the hypermucoviscosity phenotype of Klebsiella pneumoniae in Korea
Lire plus11 Jul 2012
publication
Multilocus sequence typing analysis of Staphylococcus lugdunensis implies a clonal population structure
Lire plus03 Jul 2012
publication
Phylogenetic distribution of CTX-M- and non-extended-spectrum-β-lactamase-producing Escherichia coli isolates: group B2 isolates, except clone ST131, rarely produce CTX-M enzymes
Lire plus03 Jul 2012
publication
Primary liver abscess due to CC23-K1 virulent clone of Klebsiella pneumoniae in France
Lire plus28 Jun 2012
publication
Inter-hospital outbreak of Klebsiella pneumoniae producing KPC-2 carbapenemase in Ireland
Lire plus21 Jun 2012
publication
Multilocus sequence typing as a replacement for serotyping in Salmonella enterica
Lire plus18 Jun 2012
18 May 2012
publication
CRISPR typing and subtyping for improved laboratory surveillance of Salmonella infections
Lire plus07 May 2012
publication
Detection of OXA-48 carbapenemase in the pandemic clone Escherichia coli O25b:H4-ST131 in the course of investigation of an outbreak of OXA-48-producing Klebsiella pneumoniae
Lire plus05 Mar 2012
publication
Klebsiella pneumoniae resistant to third-generation cephalosporins in five African and two Vietnamese major towns: multiclonal population structure with two major international clonal groups, CG15 and CG258
Lire plus23 Jan 2012
publication
Severity of Escherichia coli bacteraemia is independent of the intrinsic virulence of the strains assessed in a mouse model
Lire plus07 Dec 2011
publication
Human leptospira isolates circulating in Mayotte (Indian Ocean) have unique serological and molecular features
Lire plus17 Aug 2011
publication
Expansion of European vacA and cagA alleles to East-Asian Helicobacter pylori strains in Cambodia
Lire plus19 Jul 2011
publication
Evolutionary history of Helicobacter pylori sequences reflect past human migrations in Southeast Asia
Lire plus01 Jul 2011
publication
Clinical relevance of cagA and vacA gene polymorphisms in Helicobacter pylori isolates from Senegalese patients
Lire plus29 Jun 2011
publication
Evaluation of high-throughput sequencing for identifying known and unknown viruses in biological samples.
Lire plus15 Jun 2011
publication
Emerging severe and fatal infections due to Klebsiella pneumoniae in two university hospitals in France
Lire plus08 Jun 2011
publication
Characterization of the cryptic Escherichia lineages: rapid identification and prevalence
Lire plus24 May 2011
publication
PCR-based identification of Klebsiella pneumoniae subsp. rhinoscleromatis, the agent of rhinoscleroma
Lire plus29 Apr 2011
publication
Widespread carbapenem resistant Acinetobacter baumannii clones in Italian hospitals revealed by a multicenter study
Lire plus28 Apr 2011
01 Apr 2011
publication
Epidemiology of methicillin-susceptible Staphylococcus aureus lineages in five major African towns: high prevalence of Panton-Valentine leukocidin genes
Lire plus21 Mar 2011
publication
Characterization of the novel Listeria monocytogenes PCR serogrouping profile IVb-v1.
Lire plus13 Feb 2011
publication
Animal and human pathogenic Escherichia coli strains share common genetic backgrounds
Lire plus12 Feb 2011
publication
Genotypic and phenotypic characterization of the Acinetobacter calcoaceticus-Acinetobacter baumannii complex with the proposal of Acinetobacter pittii sp. nov. (formerly Acinetobacter genomic species 3) and Acinetobacter nosocomialis sp. nov. (formerly Acinetobacter genomic species 13TU)
Lire plus12 Feb 2011
publication
Rapid genotyping of Achromobacter xylosoxidans, Acinetobacter baumannii, Klebsiella pneumoniae, Pseudomonas aeruginosa and Stenotrophomonas maltophilia isolates using melting curve analysis of RAPD-generated DNA fragments (McRAPD)
Lire plus01 Feb 2011
publication
Epidemiology of methicillin-resistant Staphylococcus aureus lineages in five major African towns: emergence and spread of atypical clones
Lire plus01 Feb 2011
publication
Multilocus VNTR analysis of Mycobacterium ulcerans strains isolated in Côte d’Ivoire
Lire plus01 Feb 2011
publication
Molecular epidemiological investigation of multidrug-resistant Acinetobacter baumannii strains in four Mediterranean countries with a multilocus sequence typing scheme
Lire plus20 Dec 2010
publication
Reconstructed ancestral sequences improve pathogen identification using resequencing DNA microarrays
Lire plus09 Nov 2010
publication
High prevalence of the arginine catabolic mobile element in carriage isolates of methicillin-resistant Staphylococcus epidermidis
Lire plus08 Oct 2010
15 Sep 2010
publication
Multilocus microsatellite markers for molecular typing of Candida glabrata: application to analysis of genetic relationships between bloodstream and digestive system isolates
Lire plus01 May 2010
publication
Population genetic structure of Anopheles gambiae and Anopheles arabiensis in Niger
Lire plus07 Apr 2010
publication
The population structure of Acinetobacter baumannii: expanding multiresistant clones from an ancestral susceptible genetic pool
Lire plus24 Feb 2010
publication
Molecular epidemiology of multidrug-resistant Acinetobacter baumannii in a tertiary care hospital in Naples, Italy, shows the emergence of a novel epidemic clone
Lire plus11 Jan 2010
publication
Species delineation and clonal diversity in four Bifidobacterium species as revealed by multilocus sequencing
Lire plus30 Sep 2009
publication
First neisseria gonorrhoeae genotyping analysis in france: identification of a strain cluster with reduced susceptibility to Ceftriaxone
Lire plus21 Sep 2009
publication
Molecular epidemiology of extended-spectrum beta-lactamase-producing Klebsiella pneumoniae strains in a university hospital in Tunis, Tunisia, 1999-2005
Lire plus25 Mar 2009
publication
Virulent clones of Klebsiella pneumoniae: identification and evolutionary scenario based on genomic and phenotypic characterization
Lire plus04 Mar 2009
publication
Aedes albopictus mosquito: the main vector of the 2007 Chikungunya outbreak in Gabon
Lire plus01 Feb 2009
publication
Polyphasic characterization of xanthomonads pathogenic to members of the Anacardiaceae and their relatedness to species of Xanthomonas
Lire plus16 Jan 2009
publication
Uneven distribution of mating types among genotypes of Candida glabrata isolates from clinical samples
Lire plus16 Dec 2008
publication
From local surveys to global surveillance: three high-throughput genotyping methods for epidemiological monitoring of Xanthomonas citri pv. citri pathotypes
Lire plus03 Dec 2008
publication
Phylogeny and identification of Pantoea species and typing of Pantoea agglomerans strains by multilocus gene sequencing
Lire plus26 Nov 2008
publication
Phylogenetic and genomic diversity of human bacteremic Escherichia coli strains
Lire plus06 Oct 2008
publication
Development of 14 minisatellite markers for the citrus canker bacterium, Xanthomonas citri pv. citri
Lire plus01 Oct 2008
publication
Comparison of PFGE and multilocus sequence typing for analysis of Klebsiella pneumoniae isolates
Lire plus19 Sep 2008
05 Sep 2008
13 May 2008
publication
Emergence of carbapenem resistance in Acinetobacter baumannii in the Czech Republic is associated with the spread of multidrug-resistant strains of European clone II
Lire plus08 May 2008
publication
MLVA-NET–a standardised web database for bacterial genotyping and surveillance
Lire plus24 Dec 2007
publication
Comparative phylogenies of Burkholderia, Ralstonia, Comamonas, Brevundimonas and related organisms derived from rpoB, gyrB and rrs gene sequences
Lire plus01 Oct 2007
publication
Guidelines for the validation and application of typing methods for use in bacterial epidemiology
Lire plus17 Aug 2007
publication
Multilocus sequence typing of Lactobacillus casei reveals a clonal population structure with low levels of homologous recombination
Lire plus10 Aug 2007
publication
Recombining population structure of Plesiomonas shigelloides (Enterobacteriaceae) revealed by multilocus sequence typing
Lire plus21 Jun 2007
01 May 2007
publication
[Evolutionary history of Salmonella Typhi illustrates a new pattern of epidemiologic dynamics]
Lire plus24 Nov 2006
01 Sep 2006
01 Aug 2006
publication
Identification of Acinetobacter species and genotyping of Acinetobacter baumannii by multilocus PCR and mass spectrometry
Lire plus23 May 2006
publication
Genome microevolution of chikungunya viruses causing the Indian Ocean outbreak
Lire plus01 Dec 2005
publication
Variants of the Klebsiella pneumoniae OKP chromosomal beta-lactamase are divided into two main groups, OKP-A and OKP-B
Lire plus01 Nov 2005
01 Sep 2005
publication
Regional occurrence of plasmid-mediated carbapenem-hydrolyzing oxacillinase OXA-58 in Acinetobacter spp. in Europe
Lire plus01 Sep 2005
publication
Repetitive-DNA-element PCR fingerprinting and antibiotic resistance of pan-European multi-resistant Acinetobacter baumannii clone III strains
Lire plus19 Aug 2005
publication
Ancient origin and gene mosaicism of the progenitor of Mycobacterium tuberculosis
Lire plus01 Aug 2005
publication
Six groups of the OXY beta-Lactamase evolved over millions of years in Klebsiella oxytoca
Lire plus01 Aug 2005
01 Mar 2005
publication
Identification of coagulase-negative staphylococci other than Staphylococcus epidermidis by automated ribotyping
Lire plus22 Jan 2005
publication
Identification and antimicrobial susceptibility of 100 Klebsiella animal clinical isolates
Lire plus01 Dec 2004
publication
Diversity of aminoglycoside-resistance genes and their association with class 1 integrons among strains of pan-European Acinetobacter baumannii clones
Lire plus01 Oct 2004
publication
Species distribution and ribotype diversity of Burkholderia cepacia complex isolates from French patients with cystic fibrosis
Lire plus01 Oct 2004
publication
Development of a rapid identification method for Klebsiella pneumoniae phylogenetic groups and analysis of 420 clinical isolates
Lire plus01 Aug 2004
publication
Molecular serotyping of Klebsiella species isolates by restriction of the amplified capsular antigen gene cluster
Lire plus01 Jul 2004
publication
Diversity and evolution of the class A chromosomal beta-lactamase gene in Klebsiella pneumoniae
Lire plus01 Mar 2004
publication
Identification of a new geographically widespread multiresistant Acinetobacter baumannii clone from European hospitals
Lire plus01 Jan 2004
publication
Discrimination of Klebsiella pneumoniae and Klebsiella oxytoca phylogenetic groups and other Klebsiella species by use of amplified fragment length polymorphism
Lire plus01 Nov 2003
publication
Evaluation of the polymorphisms associated with tandem repeats for Pseudomonas aeruginosa strain typing
Lire plus01 Oct 2003
publication
Identification of Klebsiella oxytoca using a specific PCR assay targeting the polygalacturonase pehX gene
Lire plus13 Aug 2003
publication
Occurrence and spread of SHV extended-spectrum beta-lactamase-producing Klebsiella pneumoniae isolates in Curacao
Lire plus01 Feb 2003
publication
Phylogenetic diversity of bat trypanosomes of subgenus Schizotrypanum based on multilocus enzyme electrophoresis, random amplified polymorphic DNA, and cytochrome b nucleotide sequence analyses
Lire plus01 Feb 2003
publication
Evidence for genetic exchange and hybridization in Trypanosoma cruzi based on nucleotide sequences and molecular karyotype
Lire plus01 Nov 2002
01 Oct 2002
publication
Evaluation of the Etest ESBL and the BD Phoenix, VITEK 1, and VITEK 2 automated instruments for detection of extended-spectrum beta-lactamases in multiresistant Escherichia coli and Klebsiella spp
Lire plus01 Jun 2002
publication
Outbreak of a susceptible strain of Acinetobacter species 13 (sensu Tjernberg and Ursing) in an adult neurosurgical intensive care unit
Lire plus01 Jun 2002
01 May 2002
publication
Comparative evaluation of the BD Phoenix and VITEK 2 automated instruments for identification of isolates of the Burkholderia cepacia complex
Lire plus01 Mar 2002
publication
Chromosomal size variation in Trypanosoma cruzi is mainly progressive and is evolutionarily informative
Lire plus01 Sep 2001
publication
Characterisation of large and small subunit rRNA and mini-exon genes further supports the distinction of six Trypanosoma cruzi lineages
Lire plus01 Jul 2001
26 May 2001
01 May 2001
publication
Phylogenetic diversity of Klebsiella pneumoniae and Klebsiella oxytoca clinical isolates revealed by randomly amplified polymorphic DNA, gyrA and parC genes sequencing and automated ribotyping
Lire plus01 Nov 2000
publication
Identification of six Trypanosoma cruzi lineages by sequence-characterised amplified region markers
Lire plus01 Nov 2000
publication
Molecular epidemiology of penicillin-resistant Streptococcus pneumoniae colonizing children with community-acquired pneumonia and children attending day-care centres in Fortaleza, Brazil
Lire plus01 Oct 2000
publication
Molecular surveillance of European quinolone-resistant clinical isolates of Pseudomonas aeruginosa and Acinetobacter spp. using automated ribotyping
Lire plus01 Jul 2000
publication
Genomic rearrangements in trypanosomatids: an alternative to the “one gene” evolutionary hypotheses?
Lire plus01 Jul 2000
publication
In vitro potency of moxifloxacin, clinafloxacin and sitafloxacin against 248 genetically defined clinical isolates of Staphylococcus aureus
Lire plus01 May 2000
publication
Population structure and genetic typing of Trypanosoma cruzi, the agent of Chagas disease: a multilocus enzyme electrophoresis approach
Lire plus01 May 2000
publication
Distinguishing species of the Burkholderia cepacia complex and Burkholderia gladioli by automated ribotyping
Lire plus01 Apr 2000
publication
In vitro activities of sitafloxacin (DU-6859a) and six other fluoroquinolones against 8,796 clinical bacterial isolates
Lire plus01 Jan 2000
publication
Epidemiology of quinolone resistance of Klebsiella pneumoniae and Klebsiella oxytoca in Europe
Lire plus01 Jan 2000
publication
Identification of six Trypanosoma cruzi phylogenetic lineages by random amplified polymorphic DNA and multilocus enzyme electrophoresis
Lire plus01 Dec 1999
publication
Molecular epidemiology of quinolone resistance and comparative in vitro activities of new quinolones against European Staphylococcus aureus isolates
Lire plus01 Oct 1999
publication
Association of alterations in ParC and GyrA proteins with resistance of clinical isolates of Enterococcus faecium to nine different fluoroquinolones
Lire plus01 Aug 1999
publication
Comparative in vitro activities of ciprofloxacin, clinafloxacin, gatifloxacin, levofloxacin, moxifloxacin, and trovafloxacin against Klebsiella pneumoniae, Klebsiella oxytoca, Enterobacter cloacae, and Enterobacter aerogenes clinical isolates with alterations in GyrA and ParC proteins
Lire plus01 Jan 1999
publication
A phylogenetic analysis by multilocus enzyme electrophoresis and multiprimer random amplified polymorphic DNA fingerprinting of the Leishmania genome project Friedlin reference strain
Lire plus01 May 1998
publication
A phylogenetic analysis of the Trypanosoma cruzi genome project CL Brener reference strain by multilocus enzyme electrophoresis and multiprimer random amplified polymorphic DNA fingerprinting
Lire plus01 May 1998