Group
Sequence analysis [177]
Collection
Collection of the Institut Pasteur (CIP)
Dominique Clermont
Software
BPM – Beautiful Pattern Matching
Yoann Dufresne
Software
Quality-aware fastq demultiplexer (qaf_demux)
Blaise Li
PhD Student
Luc Blassel
Sequence Bioinformatics
Luc Blassel’s PhD project, funded by PRAIRIE, is to apply machine learning techniques to the analysis of sequence data. Traditional sequence alignment and analysis methods might not be able to perform as well as […]
PhD Student
Marie Morel
The bioinformatics of virus evolution and adaptation (PhD project) Marie Morel PhD project (funded by INCEPTION – supervision O. Gascuel and E. Simon-Lorière – FIRE doctoral school) aims at understanding how the various environment […]
Group
Expertise group: GIPhy – Genome Informatics and Phylogenetics
Alexis Criscuolo
Group
Expertise group: GORE – Genome Organization Regulation and Expression
Claudia Chica
Research Engineer
Yoann Dufresne
Sequence Bioinformatics
PhD Student
Courtney Thomas
Courtney is a microbial ecologist. She obtained her Masters in Marine Microbial Ecology from the University of Georgia (USA). She is currently investigating archaea that inhabit the animal intestinal microbiome.
Project
MECANICOC
Uwe Maskos • Pierre-Jean Corringer • Marie-Agnès Dillies
Laboratory
Junior Group (G5)
Evolutionary genomics of RNA viruses
Etienne Simon-Loriere
Permanent Researcher
Eugene Gladyshev
Fungal Epigenomics
Eugene Gladyshev obtained his Master degree from Yale University and PhD from Harvard University (under the supervision of Pr. Matthew Meselson). He subsequently joined the laboratory of Pr. Nancy Kleckner (Harvard University) as a […]
Software
Counter RNAseq Window (CRAW)
Bertrand Néron
Post-doc
Lasse van Wijlick
Fungal Biology and Pathogenicity
Lasse van Wijlick obtained his PhD at the Heinrich-Heine-University in Düsseldorf (Germany) in the unit of Prof. Joachim F. Ernst, working on transcriptional adaptation to host environmental conditions of the important human fungal pathogen […]
Research Engineer
Najwa Taib
Expertise group : PAGE – Protein And Gene Evolution
After a PhD in bioinformatics and microbial ecology, I joined the team of C. Brochier-Armanet (Laboratoire de Biométrie et Biologie Évolutive) for a 2 years postdoc to study the deep evolution history of Archaea […]