Ligne de temps
Jean-Christophe Olivo-Marin
Responsable de Structure
18 avr. 2024
publication
Sparse Non-Negative Matrix Factorization for Preclinical Bioluminescent Imaging
Lire plus01 mars 2024
publication
Automatic monitoring of neural activity with single-cell resolution in behaving Hydra
Lire plus15 janv. 2024
publication
Bridging the Gap: Integrating Cutting-edge Techniques into Biological Imaging with deepImageJ
Lire plus01 janv. 2024
publication
JDLL: a library to run deep learning models on Java bioimage informatics platforms.
Lire plus21 oct. 2023
publication
Encystation and Stress Responses under the Control of Ubiquitin-like Proteins in Pathogenic Amoebae
Lire plus01 sept. 2023
29 juin 2023
publication
Intermediate filaments promote glioblastoma cell invasion by controlling cell deformability and mechanosensitive gene expression
Lire plus07 juin 2023
publication
JDLL: A library to run Deep Learning models on Java bioimage informatics platforms
Lire plus01 juin 2023
publication
Automatic diagnosis and classification of breast surgical samples with dynamic full-field OCT and machine learning
Lire plus13 mai 2023
publication
Live Cells Imaging and Comparative Phosphoproteomics Uncover Proteins from the Mechanobiome in Entamoeba histolytica.
Lire plus07 févr. 2023
23 janv. 2023
publication
From Nano to Macro: Overview of the IEEE Bio Image and Signal Processing Technical Committee
Lire plus31 oct. 2022
publication
From Nano to Macro: Overview of the IEEE Bio Image and Signal Processing Technical Committee
Lire plus21 oct. 2022
publication
4D live imaging and computational modeling of a functional gut-on-a-chip evaluate how peristalsis facilitates enteric pathogen invasion.
Lire plus18 oct. 2022
publication
Smart Learning of Click and Refine for Nuclei Segmentation on Histology Images
Lire plus16 oct. 2022
02 sept. 2022
publication
Domain Adapted Multi-task Learning For Segmenting Amoeboid Cells in Microscopy
Lire plus01 sept. 2022
publication
Factorisation Non-Négative de Matrice pour séparation de sources en Imagerie par Bioluminescence préclinique
Lire plus22 juil. 2022
publication
Tracking receptor motions at the plasma membrane reveals distinct effects of ligands on CCR5 dynamics depending on its dimerization status.
Lire plus25 mai 2022
30 avr. 2022
publication
Reformulating Optical Flow to Solve Image-Based Inverse Problems and Quantify Uncertainty
Lire plus26 avr. 2022
26 avr. 2022
26 avr. 2022
22 avr. 2022
31 mars 2022
08 déc. 2021
07 oct. 2021
27 sept. 2021
publication
Interrogating RNA and protein spatial subcellular distribution in smFISH data with DypFISH
Lire plus14 sept. 2021
23 août 2021
10 juin 2021
25 mai 2021
publication
A Robust and Versatile Framework to Compare Spike Detection Methods in Calcium Imaging of Neuronal Activity
Lire plus25 mai 2021
publication
Leveraging Global Diagnosis For Tumor Localization In Dynamic Cell Imaging Of Breast Cancer Tissue Towards Fast Biopsying
Lire plus25 mai 2021
publication
Blind Source Separation In Dynamic Cell Imaging Using Non-Negative Matrix Factorization Applied To Breast Cancer Biopsies
Lire plus05 mai 2021
publication
Extended Depth of Field Preserving Color Fidelity For Automated Digital Cytology
Lire plus13 avr. 2021
publication
A Min-Max Based Hyperparameter Estimation For Domain-Adapted Segmentation Of Amoeboid Cells
Lire plus13 avr. 2021
publication
Nu3D: 3D Nuclei Segmentation from Light-Sheet Microscopy Images of the Embryonic Heart
Lire plus13 avr. 2021
publication
Morphological Reconstruction of Detached Dendritic Spines via Geodesic Path Prediction
Lire plus12 févr. 2021
publication
Missing Self-Induced Activation of NK Cells Combines with Non-Complement-Fixing Donor-Specific Antibodies to Accelerate Kidney Transplant Loss in Chronic Antibody-Mediated Rejection
Lire plus20 janv. 2021
publication
Performing point-of-care molecular testing for SARS-CoV-2 with RNA extraction and isothermal amplification
Lire plus12 janv. 2021
08 janv. 2021
project
Next generation of Structured Illumination Microscopy (SIM) for biological imaging
Lire plus08 janv. 2021
project
Machine learning methods to predict cancerous areas from Full Field Optical Coherence Tomography (FFOCT) and Dynamical FFOCT images
Lire plus08 janv. 2021
06 janv. 2021
05 janv. 2021
23 nov. 2020
publication
Cell Tracking Profiler – a user-driven analysis framework for evaluating 4D live-cell imaging data
Lire plus16 nov. 2020
publication
Evaluating the Stability of Spatial Keypoints via Cluster Core Correspondence Index
Lire plus12 nov. 2020
30 oct. 2020
26 oct. 2020
publication
E-cadherin focuses protrusion formation at the front of migrating cells by impeding actin flow
Lire plus21 oct. 2020
01 sept. 2020
publication
Transcriptional Changes in Kidney Allografts with Histology of Antibody-Mediated Rejection without Anti-HLA Donor-Specific Antibodies.
Lire plus05 août 2020
04 août 2020
publication
Highly performing point-of-care molecular testing for SARS-CoV-2 with RNA extraction and isothermal amplification.
Lire plus01 août 2020
22 juil. 2020
publication
Generalizing the Statistical Analysis of Objects’ Spatial Coupling in Bioimaging
Lire plus04 juin 2020
publication
A Protocol to Quantify Cellular Morphodynamics: From Cell Labelling to Automatic Image Analysis
Lire plus02 juin 2020
publication
Human Immune Response Triggered by Entamoeba histolytica in a 3D-Intestinal Model
Lire plus19 mai 2020
publication
Learning to segment clustered amoeboid cells from brightfield microscopy via multi-task learning with adaptive weight selection
Lire plus01 nov. 2019
publication
Real-time analysis of the behaviour of groups of mice via a depth-sensing camera and machine learning.
Lire plus01 oct. 2019
23 juil. 2019
03 juil. 2019
publication
Icytomine: A User-Friendly Tool for Integrating Workflows on Whole Slide Images
Lire plus01 juil. 2019
publication
Tracking and line integration of diffuse cellular subdomains by mesh advection
Lire plus19 févr. 2019
21 janv. 2019
publication
Compressed sensing-enabled phase-sensitive swept-source optical coherence tomography
Lire plus08 sept. 2018
publication
Stress-induced brain activation: buffering role of social behavior and neuronal nicotinic receptors
Lire plus22 août 2018
publication
Anisotropic organization of circumferential actomyosin characterizes hematopoietic stem cells emergence in the zebrafish.
Lire plus01 août 2018
publication
Denoising of Microscopy Images: A Review of the State-of-the-Art, and a New Sparsity-Based Method
Lire plus03 juil. 2018
25 mai 2018
24 mai 2018
publication
Basal cell carcinoma detection in full field OCT images using convolutional neural networks
Lire plus15 févr. 2018
publication
Mapping molecular assemblies with fluorescence microscopy and object-based spatial statistics
Lire plus06 févr. 2018
publication
Quantitative and Statistical Study of the Dynamics of Clathrin-Dependent and -Independent Endocytosis Reveal a Differential Role of EndophilinA2
Lire plus15 janv. 2018
publication
Activation of human gonadotropin-releasing hormone receptor promotes down regulation of ARHGAP18 and regulates the cell invasion of MDA-MB-231 cells
Lire plus10 janv. 2018
project
DIM ELICIT – Domain of Main Interest “Empowering LIfe sCiences with Innovative Technologies”
Lire plus07 déc. 2017
publication
Crosstalk between Entamoeba histolytica and the human intestinal tract during amoebiasis
Lire plus07 déc. 2017
publication
Crosstalk between Entamoeba histolytica and the human intestinal tract during amoebiasis
Lire plus01 déc. 2017
31 août 2017
publication
Legionella pneumophila Modulates Mitochondrial Dynamics to Trigger Metabolic Repurposing of Infected Macrophages
Lire plus24 août 2017
publication
A sparsity-based simplification method for segmentation of spectral-domain optical coherence tomography images
Lire plus23 août 2017
publication
BioFlow: a non-invasive, image-based method to measure speed, pressure and forces inside living cells.
Lire plus11 juil. 2017
publication
Activation of human gonadotropin-releasing hormone receptor promotes down regulation of ARHGAP18 and regulates the cell invasion of MDA-MB-231 cells
Lire plus19 mai 2017
19 avr. 2017
publication
Reducing data acquisition for fast structured illumination microscopy using compressed sensing
Lire plus21 mars 2017
18 mars 2017
publication
Computer-assisted topological analysis of renal allograft inflammation adds to risk evaluation at diagnosis of humoral rejection
Lire plus27 févr. 2017
publication
Amotl1 mediates sequestration of the Hippo effector Yap1 downstream of Fat4 to restrict heart growth.
Lire plus07 déc. 2016
01 déc. 2016
publication
The motility of Entamoeba histolytica: finding ways to understand intestinal amoebiasis.
Lire plus22 août 2016
publication
Tunneling nanotubes spread fibrillar α-synuclein by intercellular trafficking of lysosomes
Lire plus04 août 2016
publication
The motility of Entamoeba histolytica: finding ways to understand intestinal amoebiasis
Lire plus05 juin 2016
23 mai 2016
10 mai 2016
16 avr. 2016
publication
Biophysical measurements in 2D and 3D live cell imaging using fluid dynamics and optical flow
Lire plus14 avr. 2016
publication
Sparsity-based simplification of spectral-domain optical coherence tomography images of cardiac samples
Lire plus26 févr. 2016
publication
Intracellular traffic of the lysine and glutamic acid rich protein KERP1 reveals features of endomembrane organization in Entamoeba histolytica
Lire plus10 févr. 2016
publication
Human Liver Infection in a Dish: Easy-To-Build 3D Liver Models for Studying Microbial Infection
Lire plus28 janv. 2016
news
A new publication on the link between anxiety, depression, olfactory deficits and adult neurogenesis
Lire plus17 déc. 2015
27 oct. 2015
13 oct. 2015
11 sept. 2015
01 sept. 2015
publication
Absence of Fungal Spore Internalization by Bronchial Epithelium in Mouse Models Evidenced by a New Bioimaging Approach and Transmission Electronic Microscopy.
Lire plus11 juil. 2015
29 juin 2015
publication
Membrane protrusion powers clathrin-independent endocytosis of interleukin-2 receptor
Lire plus15 juin 2015
07 juin 2015
06 juin 2015
06 juin 2015
18 avr. 2015
25 mars 2015
10 mars 2015
07 mars 2015
01 févr. 2015
20 janv. 2015
13 janv. 2015
06 janv. 2015
publication
Acute stress in adulthood impoverishes social choices and triggers aggressiveness in preclinical models
Lire plus02 déc. 2014
22 oct. 2014
01 juin 2014
publication
Early sequence of events triggered by the interaction of Neisseria meningitidis with endothelial cells.
Lire plus01 mars 2014
publication
An unbiased risk estimator for image denoising in the presence of mixed poisson-gaussian noise
Lire plus01 mars 2014
08 janv. 2014
publication
Urinary retinol binding protein is a marker of the extent of interstitial kidney fibrosis
Lire plus04 déc. 2013
01 nov. 2013
24 oct. 2013
03 sept. 2013
publication
AutomiG, a biosensor to detect alterations in miRNA biogenesis and in small RNA silencing guided by perfect target complementarity
Lire plus23 juil. 2013
publication
Nonaggressive and adapted social cognition is controlled by the interplay between noradrenergic and nicotinic receptor mechanisms in the prefrontal cortex
Lire plus17 mai 2013
23 janv. 2013
publication
The signalling factor PI3K is a specific regulator of the clathrin-independent dynamin-dependent endocytosis of IL-2 receptors
Lire plus21 janv. 2013
publication
Extracting 3D cell parameters from dense tissue environments: application to the development of the mouse heart
Lire plus15 janv. 2013
publication
Quantitative analysis of polarity in 3D reveals local cell coordination in the embryonic mouse heart
Lire plus19 sept. 2012
13 sept. 2012
publication
Shigella effector IpaB-induced cholesterol relocation disrupts the Golgi complex and recycling network to inhibit host cell secretion
Lire plus28 juin 2012
01 mai 2012
publication
Modulation of the mouse prefrontal cortex activation by neuronal nicotinic receptors during novelty exploration but not by exploration of a familiar environment.
Lire plus23 avr. 2012
publication
Characterizing the 3-D field distortions in low numerical aperture fluorescence zooming microscope
Lire plus17 avr. 2012
publication
Trisomy for synaptojanin1 in Down syndrome is functionally linked to the enlargement of early endosomes
Lire plus05 mars 2012
publication
Kidney graft outcome and quality (after transplantation) from uncontrolled deceased donors after cardiac arrest
Lire plus04 mars 2012
15 févr. 2012
publication
Newly visualized fibrillar collagen scaffolds dictate Entamoeba histolytica invasion route in the human colon
Lire plus27 oct. 2011
publication
New computerized color image analysis for the quantification of interstitial fibrosis in renal transplantation
Lire plus11 sept. 2011
publication
Numerical evaluation of sampling bounds for near-optimal reconstruction in compressed sensing
Lire plus22 juil. 2011
12 juil. 2011
01 juil. 2011
21 juin 2011
publication
Specific targeting of the GABA-A receptor α5 subtype by a selective inverse agonist restores cognitive deficits in Down syndrome mice
Lire plus14 juin 2011
publication
Interstitial fibrosis evolution on early sequential screening renal allograft biopsies using quantitative image analysis
Lire plus04 avr. 2011
publication
The adaptor-associated kinase 1, AAK1, is a positive regulator of the Notch pathway
Lire plus01 janv. 2011
publication
Spherical Harmonics based extraction and annotation of cell shape in 3D time-lapse microscopy sequences
Lire plus01 janv. 2011
30 déc. 2010
publication
3-D active meshes: fast discrete deformable models for cell tracking in 3-D time-lapse microscopy
Lire plus01 déc. 2010
publication
Disruption of Adult Neurogenesis in the Olfactory Bulb Affects Social Interaction but not Maternal Behavior
Lire plus08 oct. 2010
28 avr. 2010
publication
Pak1 phosphorylation enhances cortactin-N-WASP interaction in clathrin-caveolin-independent endocytosis
Lire plus15 avr. 2010
publication
Escape of HIV-1-infected dendritic cells from TRAIL-mediated NK cell cytotoxicity during NK-DC cross-talk–a pivotal role of HMGB1
Lire plus01 mars 2010
publication
A versatile system for the neuronal subtype specific expression of lentiviral vectors.
Lire plus14 janv. 2010
publication
Urinary procollagen III aminoterminal propeptide (PIIINP): a fibrotest for the nephrologist
Lire plus01 janv. 2010
publication
Combining local filtering and multiscale analysis for edge, ridge, and curvilinear objects detection
Lire plus01 janv. 2010
07 nov. 2009
publication
Compressed Sensing in microscopy with random projections in the Fourier domain
Lire plus01 nov. 2009
publication
[Recent approaches of quantification of interstitial fibrosis in renal transplantation]
Lire plus01 nov. 2009
publication
Interstitial fibrosis quantification in renal transplant recipients randomized to continue cyclosporine or convert to sirolimus
Lire plus15 sept. 2009
publication
Cellular and behavioral effects of cranial irradiation of the subventricular zone in adult mice
Lire plus04 sept. 2009
01 août 2009
14 juil. 2009
publication
In vivo colocalisation of oskar mRNA and trans-acting proteins revealed by quantitative imaging of the Drosophila oocyte
Lire plus01 juil. 2009
01 juin 2009
01 avr. 2009
publication
WAFL, a new protein involved in regulation of early endocytic transport at the intersection of actin and microtubule dynamics.
Lire plus08 févr. 2009
01 janv. 2009
12 nov. 2008
publication
A dual role for actin and microtubule cytoskeleton in the transport of Golgi units from the nurse cells to the oocyte across ring canals
Lire plus02 nov. 2008
01 nov. 2008
17 mai 2008
publication
Improving single particle localization with an empirically calibrated Gaussian kernel
Lire plus27 déc. 2007
publication
Quantification of interstitial fibrosis by image analysis on routine renal biopsy in patients receiving cyclosporine
Lire plus01 oct. 2007
publication
Quantification of interstitial fibrosis by image analysis on routine renal biopsy 1 year after transplantation in patients managed by C2 monitoring of cyclosporine microemulsion
Lire plus27 avr. 2007
01 avr. 2007
publication
Gaussian approximations of fluorescence microscope point-spread function models
Lire plus01 janv. 2007
11 oct. 2006
publication
Olfactory discrimination learning increases the survival of adult-born neurons in the olfactory bulb
Lire plus01 oct. 2006
publication
Quantitative four-dimensional tracking of cytoplasmic and nuclear HIV-1 complexes
Lire plus24 juil. 2006
publication
Cerebral microcirculation shear stress levels determine Neisseria meningitidis attachment sites along the blood-brain barrier
Lire plus01 juin 2006
publication
SAGA interacting factors confine sub-diffusion of transcribed genes to the nuclear envelope
Lire plus01 mai 2006
publication
Multiple particle tracking in 3-D+t microscopy: method and application to the tracking of endocytosed quantum dots
Lire plus01 avr. 2006
publication
Richardson-Lucy algorithm with total variation regularization for 3D confocal microscope deconvolution
Lire plus01 févr. 2006
publication
Human tumor necrosis factor is a chemoattractant for the parasite Entamoeba histolytica
Lire plus16 janv. 2006
publication
Telomere tethering at the nuclear periphery is essential for efficient DNA double strand break repair in subtelomeric region
Lire plus01 nov. 2005
01 sept. 2005
publication
Segmenting and tracking fluorescent cells in dynamic 3-D microscopy with coupled active surfaces
Lire plus20 juil. 2005
publication
Neonatal and adult neurogenesis provide two distinct populations of newborn neurons to the mouse olfactory bulb
Lire plus14 juil. 2005
publication
Human MxA protein participates to the interferon-related inhibition of hepatitis B virus replication in female transgenic mice
Lire plus01 janv. 2005
publication
Myosin II and the Gal-GalNAc lectin play a crucial role in tissue invasion by Entamoeba histolytica
Lire plus19 juil. 2004
publication
Cortactin and Crk cooperate to trigger actin polymerization during Shigella invasion of epithelial cells
Lire plus01 juil. 2004
publication
Imaging movement of malaria parasites during transmission by Anopheles mosquitoes
Lire plus01 juin 2003
publication
Anti-inflammatory role for intracellular dimeric immunoglobulin a by neutralization of lipopolysaccharide in epithelial cells
Lire plus15 janv. 2003
publication
The metabotropic glutamate receptor mGluR5 is endocytosed by a clathrin-independent pathway
Lire plus01 janv. 2003
publication
EhPAK, a member of the p21-activated kinase family, is involved in the control of Entamoeba histolytica migration and phagocytosis
Lire plus01 nov. 2002
publication
Membrane-cytoskeleton interactions during the formation of the immunological synapse and subsequent T-cell activation
Lire plus01 oct. 2002
publication
Segmentation and tracking of migrating cells in videomicroscopy with parametric active contours: a tool for cell-based drug testing
Lire plus01 mars 2002
publication
Nuclear architecture and spatial positioning help establish transcriptional states of telomeres in yeast
Lire plus15 févr. 2002
publication
A central role for Plasmodium falciparum subtelomeric regions in spatial positioning and telomere length regulation
Lire plus01 juin 2001
01 janv. 2000
01 avr. 1999
publication
Myosin IB from Entamoeba histolytica is involved in phagocytosis of human erythrocytes
Lire plus14 janv. 1999
publication
Receptor-mediated substrate translocation through the nuclear pore complex without nucleotide triphosphate hydrolysis
Lire plus01 janv. 1999
publication
Dual-color visualization of trans-Golgi network to plasma membrane traffic along microtubules in living cells
Lire plus16 nov. 1998
publication
Interferon alpha inhibits a Src-mediated pathway necessary for Shigella-induced cytoskeletal rearrangements in epithelial cells
Lire plus01 juin 1998
publication
Virulence and functions of myosin II are inhibited by overexpression of light meromyosin in Entamoeba histolytica
Lire plus01 févr. 1998
01 janv. 1998
publication
Localization of three human polypeptide GalNAc-transferases in HeLa cells suggests initiation of O-linked glycosylation throughout the Golgi apparatus
Lire plus01 déc. 1997
publication
Cellular expression and proteolytic processing of presenilin proteins is developmentally regulated during neuronal differentiation
Lire plus01 déc. 1997
publication
Dendroaxonal transcytosis of transferrin in cultured hippocampal and sympathetic neurons
Lire plus01 avr. 1997
publication
Molecular requirements for bi-directional movement of phagosomes along microtubules
Lire plus01 oct. 1993
01 févr. 1992
publication
Regional expression of the homeobox gene Nkx-2.2 in the developing mammalian forebrain
Lire plus01 déc. 1991
publication
[Functional microscopic imaging of the thyroid gland with the help of analytical ion microscopy]
Lire plus01 déc. 1991
01 déc. 1990
publication
Digital correlation of ion and optical microscopic images: application to the study of thyroglobulin chemical modification
Lire plus01 oct. 1989
01 janv. 1986
publication