Ligne de temps

Jean-Yves Tinevez
Ingénieur(e) de Recherche
22 mars 2024
event

Open days – Digital Pathology

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17 janv. 2024
publication

Extraocular muscle stem cells exhibit distinct cellular properties associated with non-muscle molecular signatures.

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01 janv. 2024
publication

JDLL: a library to run deep learning models on Java bioimage informatics platforms.

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20 nov. 2023
publication

MiniBAR/GARRE1 is a dual Rac and Rab effector required for ciliogenesis.

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06 sept. 2023
project

Effect of mood states on neural connectome

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05 sept. 2023
news

New publication – Apical size and deltaA expression predict adult neural stem cell decisions along lineage progression

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01 sept. 2023
publication

Apical size and deltaA expression predict adult neural stem cell decisions along lineage progression

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17 juil. 2023
course

Bioinformatics program for PhD students 2023 2024

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12 juil. 2023
publication

Three-dimensional images reveal the impact of the endosymbiont Midichloria mitochondrii on the host mitochondria.

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07 juin 2023
publication

JDLL: A library to run Deep Learning models on Java bioimage informatics platforms

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17 mai 2023
publication

LPS-Induced Systemic Inflammation Affects the Dynamic Interactions of Astrocytes and Microglia with the Vasculature of the Mouse Brain Cortex.

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01 mai 2023
publication

ExTrack characterizes transition kinetics and diffusion in noisy single-particle tracks.

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06 avr. 2023
publication

HIV-induced membraneless organelles orchestrate post-nuclear entry steps.

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24 févr. 2023
event

Symposium and Workshop “Pushing the frontiers of dynamic imaging”

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21 févr. 2023
publication

Antagonism of ALAS1 by the Measles Virus V protein contributes to degradation of the mitochondrial network and promotes interferon response.

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26 déc. 2022
publication

Apical size and deltaA expression predict adult neural stem cell decisions along lineage progression

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23 août 2022
publication

Extracting multiple surfaces from 3D microscopy images in complex biological tissues with the Zellige software tool.

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12 juil. 2022
course

Image Processing for Electron Microscopy – CryoTomography

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11 juil. 2022
course

Bioinformatics program for PhD students 2022-2023

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28 juin 2022
news

Tracking cells with machine-learning and deep-learning segmentation algorithms in TrackMate

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02 juin 2022
publication

TrackMate 7: integrating state-of-the-art segmentation algorithms into tracking pipelines.

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07 avr. 2022
publication

Best Fit 3D Basilar Membrane Reconstruction to Routinely Assess the Scalar Position of the Electrode Array after Cochlear Implantation.

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23 mars 2022
publication

Evolutionary conservation of centriole rotational asymmetry in the human centrosome.

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25 févr. 2022
publication

Molecular organization and mechanics of single vimentin filaments revealed by super-resolution imaging.

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05 oct. 2021
publication

Listeriolysin S: A bacteriocin from Listeria monocytogenes that induces membrane permeabilization in a contact-dependent manner.

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11 août 2021
course

Bioinformatics program for PhD students 2021-2022

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05 août 2021
publication

Dynamic spatiotemporal coordination of neural stem cell fate decisions occurs through local feedback in the adult vertebrate brain.

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02 juil. 2021
publication

LocalZProjector and DeProj: a toolbox for local 2D projection and accurate morphometrics of large 3D microscopy images.

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01 janv. 2021
publication

Highlights from the 2016-2020 NEUBIAS training schools for Bioimage Analysts: a success story and key asset for analysts and life scientists.

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24 sept. 2020
course

Bioinformatics program for PhD students 2020-2021

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05 août 2020
event

BioImage Informatics 2020

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01 mai 2020
publication

Shigella impairs human T lymphocyte responsiveness by hijacking actin cytoskeleton dynamics and T cell receptor vesicular trafficking.

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11 févr. 2020
course

Microscopy – Principles and Applications of Fluorescence Microscopy

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01 janv. 2020
publication

Automated cell tracking using StarDist and TrackMate.

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01 nov. 2019
publication

Shigella-mediated oxygen depletion is essential for intestinal mucosa colonization.

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18 oct. 2019
publication

The NEMO Dots Assembly: Single-Particle Tracking and Analysis

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05 juin 2019
event

Amira Software Workshop – Institut Pasteur – 19th of June 2019

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08 avr. 2019
news

Image Analysis Open-Desks – every two Thursdays.

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16 janv. 2019
event

Hands-on Imaris – Microscopy images analysis – 15th of February 2019.

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14 janv. 2019
publication

Altered spinogenesis in iPSC-derived cortical neurons from patients with autism carrying de novo SHANK3 mutations.

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01 janv. 2019
publication

Imaging of Red-Shifted Light From Bioluminescent Tumors Using Fluorescence by Unbound Excitation From Luminescence.

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03 déc. 2018
publication

Bidirectional intraflagellar transport is restricted to two sets of microtubule doublets in the trypanosome flagellum.

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22 nov. 2018
event

PhD program course – Fall 2018 – Introduction to image analysis.

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22 août 2018
publication

Anisotropic organization of circumferential actomyosin characterizes hematopoietic stem cells emergence in the zebrafish.

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01 juin 2018
publication

Fluorescence imaging host pathogen interactions: fifteen years benefit of hindsight….

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28 mai 2018
event

Getting started with Icy – User-friendly Bioimage Analysis – 29th of June 2018.

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08 mai 2018
publication

TIM-1 Ubiquitination Mediates Dengue Virus Entry.

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19 avr. 2018
publication

MUB40 Binds to Lactoferrin and Stands as a Specific Neutrophil Marker.

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12 avr. 2018
software

MaMuT

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29 mars 2018
publication

Multi-view light-sheet imaging and tracking with the MaMuT software reveals the cell lineage of a direct developing arthropod limb.

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29 nov. 2017
software

TrackMate

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15 nov. 2017
team

Hub d’Analyse d’Images

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17 août 2017
team

BioImagerie Photonique (UTechS PBI)

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01 mars 2017
publication

The infectious hypoxia: occurrence and causes during Shigella infection.

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27 févr. 2017
event

Luxendo InVi-SPIM microscope demo @ Imagopole – March 13th to the 17th.

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15 févr. 2017
publication

TrackMate: An open and extensible platform for single-particle tracking.

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22 juin 2016
publication

Object Segmentation and Ground Truth in 3D Embryonic Imaging.

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10 oct. 2015
publication

Three-dimensional Quantification of Dendritic Spines from Pyramidal Neurons Derived from Human Induced Pluripotent Stem Cells.

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07 sept. 2015
project

PTR 496 – Investigating the reciprocal relationship between macrophage inflammasome activity and intracellular Leishmania infection

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23 juin 2015
publication

Bioimage analysis of Shigella infection reveals targeting of colonic crypts.

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27 févr. 2015
publication

Spatially resolved contrast measurement of diffractive micromirror arrays

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25 févr. 2015
project

Development and Application of new Molecular Probes

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25 janv. 2015
publication

Spatio-angular light control in microscopes using micro mirror arrays

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25 janv. 2015
publication

A new method to achieve tens of nm axial super-localisation based on conical diffraction PSF shaping

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28 août 2014
publication

Conical diffraction as a versatile building block to implement new imaging modalities for superresolution in fluorescence microscopy

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01 avr. 2014
publication

Msx1 and Msx2 act as essential activators of Atoh1 expression in the murine spinal cord.

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15 mars 2014
publication

In vitro characterization of Fluorescence by Unbound Excitation from Luminescence: broadening the scope of energy transfer.

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01 mars 2014
publication

Objective comparison of particle tracking methods.

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20 janv. 2014
publication

TNF and IL-1 exhibit distinct ubiquitin requirements for inducing NEMO-IKK supramolecular structures.

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01 janv. 2014
publication

Conical diffraction illumination opens the way for low phototoxicity super-resolution imaging.

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01 mai 2013
publication

A simple model for the fate of the cytokinesis midbody remnant: implications for remnant degradation by autophagy.

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21 mars 2013
publication

Crumbs affects protein dynamics in anterior regions of the developing Drosophila embryo.

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08 mars 2013
publication

Micro mirror arrays as high-resolution spatial light modulators for photoactivation and optogenetics

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28 juin 2012
publication

Fiji: an open-source platform for biological-image analysis.

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27 févr. 2012
publication

[The mechanics of the cellular division or how to split a sphere into two?]

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01 janv. 2012
publication

A quantitative method for measuring phototoxicity of a live cell imaging microscope.

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15 sept. 2011
publication

Strategies of professional phagocytes in vivo: unlike macrophages, neutrophils engulf only surface-associated microbes.

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07 août 2011
publication

Polar actomyosin contractility destabilizes the position of the cytokinetic furrow.

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01 nov. 2009
publication

Harmonin-b, an actin-binding scaffold protein, is involved in the adaptation of mechanoelectrical transduction by sensory hair cells.

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21 oct. 2009
publication

Role of cortical tension in bleb growth.

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01 mars 2009
publication

Irradiation damage to frog inner ear during synchrotron radiation tomographic investigation

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17 août 2007
publication

Unifying the various incarnations of active hair-bundle motility by the vertebrate hair cell

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