Timeline

Marie-Agnès Dillies
Head of Structure
02 Oct 2019
publication

Vaccines inducing immunity to Lassa virus glycoprotein and nucleoprotein protect macaques after a single shot

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01 Oct 2019
course

Bioinformatics program for PhD students

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12 Jul 2019
publication

Metabolic plasticity of HIV-specific CD8+ T cells is associated with enhanced antiviral potential and natural control of HIV-1 infection

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22 Nov 2018
event

PhD program course – Fall 2018 – Introduction to image analysis.

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19 Jul 2018
course

Introduction to data analysis

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19 Jul 2018
course

Morning session – Data analysis using R

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19 Jul 2018
course

Introduction to Data Analysis

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19 Jul 2018
course

Introduction to Data Analysis

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19 Jul 2018
course

sincellTE

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19 Jul 2018
course

Introduction to Data Analysis

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21 May 2018
publication

Expansion of the SOS regulon of Vibrio cholerae through extensive transcriptome analysis and experimental validation

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24 Jan 2018
project

MECANICOC

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27 Dec 2017
news

Hot off the press: DENV host factors identified by innovative transcriptomics approach

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19 Dec 2017
publication

Individual co-variation between viral RNA load and gene expression reveals novel host factors during early dengue virus infection of the Aedes aegypti midgut

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01 Mar 2017
project

Deciphering dormancy in Cryptocococcus neoformans

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07 Feb 2017
publication

Comparison of biofilm formation and motility processes in arsenic-resistant Thiomonas spp. strains revealed divergent response to arsenite

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09 Jan 2017
event

Introduction to data analysis

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21 Oct 2016
publication

Extensive transcriptome analysis correlates the plasticity of Entamoeba histolytica pathogenesis to rapid phenotype changes depending on the environment

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13 Jul 2016
publication

MEMHDX: an interactive tool to expedite the statistical validation and visualization of large HDX-MS datasets

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23 Jun 2016
software

MEMHDX – Mixed Effects Models for HDX experiments

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15 Jun 2016
publication

GH16 and GH81 family β-(1,3)-glucanases in Aspergillus fumigatus are essential for conidial cell wall morphogenesis

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09 Jun 2016
publication

SARTools: A DESeq2- and EdgeR-Based R Pipeline for Comprehensive Differential Analysis of RNA-Seq Data

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18 May 2016
software

SARTools

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10 May 2016
project

Host microbiota modification by epidemic Listeria monocytogenes

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06 May 2016
news

A bacteriocin from epidemic Listeria strains alters the host intestinal microbiota to favor infection (PNAS May 2nd, 2016)

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26 Apr 2016
event

Training: analysis of the transcriptome by RNAseq

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20 Apr 2016
course

Training: analysis of the transcriptome by RNAseq

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24 Mar 2016
publication

Comparative analysis of viral RNA signatures on different RIG-I-like receptors

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01 Dec 2015
publication

Overexpression of the Heterochromatinization Factor BAHD1 in HEK293 Cells Differentially Reshapes the DNA Methylome on Autosomes and X Chromosome

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20 Oct 2015
publication

Normal and Cystic Fibrosis Human Bronchial Epithelial Cells Infected with Pseudomonas aeruginosa Exhibit Distinct Gene Activation Patterns

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08 Oct 2015
project

Characterization of the SigmaS network by RNA sequencing and identification of SigmaS-controlled small regulatory RNAs in Salmonella

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30 Sep 2015
publication

Adaptation in Toxic Environments: Arsenic Genomic Islands in the Bacterial Genus Thiomonas

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24 Sep 2015
news

Single Cell RNAseq at PF2, by O.Sismeiro and M-A.Dillies

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18 Sep 2015
project

A personal database system for large scale quantitative results exploration (Cassandre, PTR 463)

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14 Sep 2015
project

HIV signature on RIG-I-like receptors

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06 Sep 2015
project

Functional characterization of mosquito genes involved in dengue virus transmission identified by RNA-seq at the individual midgut level

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21 Jul 2015
project

Development of a new statistical tool for the analysis of large HDX-MS data sets

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20 Jul 2015
project

16S rDNA data analysis

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26 Jun 2015
team

Bioinformatics and Biostatistics HUB

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18 Mar 2015
team

Biomics

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13 Mar 2015
project

Biostatistics for data analysis

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04 Feb 2015
project

Technological developments

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10 Jan 2015
publication

Repressor activity of the RpoS/σS-dependent RNA polymerase requires DNA binding

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05 Dec 2014
publication

Differences in gene transcriptomic pattern of Plasmodium falciparum in children with cerebral malaria and asymptomatic carriers

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08 May 2014
publication

Expanding the RpoS/σS-network by RNA sequencing and identification of σS-controlled small RNAs in Salmonella

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31 Mar 2014
publication

A putative regulatory genetic locus modulates virulence in the pathogen Leptospira interrogans

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19 Dec 2013
publication

Identification of the virulence landscape essential for Entamoeba histolytica invasion of the human colon

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17 Sep 2013
publication

Identification and characterization of the genetic changes responsible for the characteristic smooth-to-rough morphotype alterations of clinically persistent Mycobacterium abscessus

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22 May 2013
publication

Massive activation of archaeal defense genes during viral infection

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01 Apr 2013
publication

Identification of RNA partners of viral proteins in infected cells

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01 Jan 2013
publication

Life in an arsenic-containing gold mine: genome and physiology of the autotrophic arsenite-oxidizing bacterium rhizobium sp. NT-26

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20 Dec 2012
publication

Quantification of stochastic noise of splicing and polyadenylation in Entamoeba histolytica

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05 Apr 2012
publication

Eoulsan: a cloud computing-based framework facilitating high throughput sequencing analyses

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24 Feb 2012
publication

Endoplasmic reticulum stress-sensing mechanism is activated in Entamoeba histolytica upon treatment with nitric oxide

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17 Dec 2010
publication

Temporal transcriptomic response during arsenic stress in Herminiimonas arsenicoxydans

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10 Jun 2010
publication

From array-based hybridization of Helicobacter pylori isolates to the complete genome sequence of an isolate associated with MALT lymphoma.

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10 Jun 2010
publication

From array-based hybridization of Helicobacter pylori isolates to the complete genome sequence of an isolate associated with MALT lymphoma

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18 Feb 2010
publication

Multiple controls affect arsenite oxidase gene expression in Herminiimonas arsenicoxydans

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15 Oct 2009
publication

FlexiChip package: an universal microarray with a dedicated analysis software for high-thoughput SNPs detection linked to anti-malarial drug resistance

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03 Aug 2009
publication

The global regulator CodY regulates toxin gene expression in Bacillus anthracis and is required for full virulence

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01 Jan 2007
publication

Bringing the genome of Legionella pneumophila to life (book chapter)

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