Laboratory
Scientific computing [136]
Project
Numerical methods for network analysis
Christian L. Vestergaard
PhD Student
Virgile Andreani
Physicist and computer scientist by training, I develop quantitative population models of antibiotic resistance, which I calibrate using optimal experimental design. I then exploit them to engineer optimal treatment strategies.
Permanent Researcher
Christian L. Vestergaard
Decision and Bayesian Computation
I am a statistical physicist and biophysicist with a main interest in data-driven modeling and in developing methods for the analysis of complex dynamical systems. The focus of my research has been on time-varying […]
Laboratory
InBio: Experimental and Computational Methods for Modeling Cellular Processes
Grégory Batt
Research Engineer
François Laurent
Decision and Bayesian Computation
Biomolecule random walk analysis I am in charge of developping the TRamWAy Python library for random walk analysis. The library features multiple tools to build processing chains/pipelines for the spatial or spatio-temporal resolution of […]
Research Engineer
Quentin Giai Gianetto
Bioinformatics and Biostatistics HUB
Since September 2016, I am a research engineer in the Bioinformatics and Biostatistics HUB of the Institut Pasteur and detached in the Proteomics facility. I have a PhD in Signal Processing from the Ecole […]
Research Engineer
Thomas Bigot
Expertise group : PAGE – Protein And Gene Evolution
As a bioinformatics engineer, I design analysis methods to extract sequences of known or novel pathogens from metagenomic sequencing data of animal or clinical samples. My work involves evaluating existing methods based on local […]
Software
Sequana: a set of flexible NGS pipelines
Thomas Cokelaer
Program Project
INCEPTION – Institut Convergence for the study of Emergence of Pathology Through Individuals and Populations
IINCEPTION Goal The Inception’s goal is to develop a core structure to mobilize data resources, numerical sciences, and fundamental experimental biology in a range of health issues (Official website here : https://www.inception-program.fr/en). Inception program […]
Project
HIV-1 Drug Resistance Mutation analysis
Anna Zhukova
Research Engineer
Thomas Obadia
Expertise group : Stats
Thomas is a biostatistician who holds an engineering degree in Agronomy (Agrocampus Ouest, Rennes, France). He also holds a Ph.D. in biostatistics from Université Pierre et Marie Curie for his work on the spread of nosocomial pathogens […]
Permanent Researcher
Olivier Sperandio
Chemoinformatics and proteochemometrics
Research Engineer
Anastasia Gazi
Ultrastructural BioImaging Core Facility
Viruses were for quite long characterized as the invisible heteronomous agents, (unseen by light microscopy & unable to propagate themselves in the absence of susceptible cells) capable of escaping the bacteriological filters (Rivers, 1932, […]
Group
Neural circuits for spatial navigation and memory
Christoph Schmidt-Hieber
Permanent Researcher
Christoph Schmidt-Hieber
Neural circuits for spatial navigation and memory
Christoph Schmidt-Hieber studied medicine in Freiburg, Germany, where for his thesis project he worked on the role of newborn neurons in the adult brain together with Josef Bischofberger and Peter Jonas. He then joined […]